Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:40:54 (2084): wrapper (7.7.26015): starting
01:40:54 (2084): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 01:40:54] Arguments: --nthreads 10
[2025-06-04 01:40:54] Threads: 10
[2025-06-04 01:40:54] Checking for CVMFS
[2025-06-04 01:40:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:40:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:40:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:40:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:40:54] 2.11.2.0 5464 109967 303008 146769 0 516 18157902 18432000 4051 130560 0 177703158 99.261 466776544 37704 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 01:40:54] CVMFS is ok
[2025-06-04 01:40:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:40:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:40:54] Further information can be found at the LHC@home message board.
[2025-06-04 01:40:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:40:54] Checking for apptainer binary...
[2025-06-04 01:40:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:40:54] Running /usr/bin/apptainer --version
[2025-06-04 01:40:54] apptainer version 1.3.2-1.el7
[2025-06-04 01:40:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:40:55] c-210-12.aglt2.org
[2025-06-04 01:40:55] apptainer works
[2025-06-04 01:40:55] Set ATHENA_PROC_NUMBER=10
[2025-06-04 01:40:55] Set ATHENA_CORE_NUMBER=10
[2025-06-04 01:40:55] Starting ATLAS job with PandaID=6678244384
[2025-06-04 01:40:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:58:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:58:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 02:58:41]  is_altstaged=None
[2025-06-04 02:58:41]  is_tar=False
[2025-06-04 02:58:41]  lfn=log.45006595._049389.job.log.tgz.1
[2025-06-04 02:58:41]  mtime=0
[2025-06-04 02:58:41]  protocol_id=None
[2025-06-04 02:58:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 02:58:41]  replicas=None
[2025-06-04 02:58:41]  scope=mc23_13p6TeV
[2025-06-04 02:58:41]  status=None
[2025-06-04 02:58:41]  status_code=0
[2025-06-04 02:58:41]  storage_token=
[2025-06-04 02:58:41]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678244384/log.45006595._049389.job.log.tgz.1
[2025-06-04 02:58:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/81/log.45006595._049389.job.log.tgz.1
[2025-06-04 02:58:41]  workdir=None
[2025-06-04 02:58:41] ]
[2025-06-04 02:58:41] 2025-06-04 06:58:15,662 | INFO     | transferring file log.45006595._049389.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678244384/log.45006595._049389.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:58:41] 2025-06-04 06:58:15,663 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678244384/log.45006595._049389.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._049389.job
[2025-06-04 02:58:41] 2025-06-04 06:58:15,677 | INFO     | adding to output.list: log.45006595._049389.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/86/81/log.45006595._049389.job.log.tg
[2025-06-04 02:58:41] 2025-06-04 06:58:15,677 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:58:41] 2025-06-04 06:58:15,677 | INFO     | summary of transferred files:
[2025-06-04 02:58:41] 2025-06-04 06:58:15,677 | INFO     |  -- lfn=log.45006595._049389.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:58:41] 2025-06-04 06:58:15,678 | INFO     | stage-out finished correctly
[2025-06-04 02:58:41] 2025-06-04 06:58:17,212 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:58:41] 2025-06-04 06:58:18,009 | INFO     | PID=5833 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 02:58:41] 2025-06-04 06:58:18,010 | INFO     | .. there are 7 such processes running
[2025-06-04 02:58:41] 2025-06-04 06:58:18,788 | INFO     | job 6678244384 has state=finished
[2025-06-04 02:58:41] 2025-06-04 06:58:18,789 | INFO     | preparing for final server update for job 6678244384 in state='finished'
[2025-06-04 02:58:41] 2025-06-04 06:58:18,789 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:58:41] 2025-06-04 06:58:18,789 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:58:41] 2025-06-04 06:58:18,789 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:58:41] 2025-06-04 06:58:18,790 | INFO     | job 6678244384 has finished - writing final server update
[2025-06-04 02:58:41] 2025-06-04 06:58:18,790 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:58:41] 2025-06-04 06:58:18,792 | INFO     | executing command: lscpu
[2025-06-04 02:58:41] 2025-06-04 06:58:18,827 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:58:41] 2025-06-04 06:58:20,313 | WARNING  | process 12387 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 02:58:41] 2025-06-04 06:58:20,314 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678244384/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:58:41] 2025-06-04 06:58:20,477 | INFO     | number of running child processes to parent process 12387: 1
[2025-06-04 02:58:41] 2025-06-04 06:58:20,477 | INFO     | maximum number of monitored processes: 6
[2025-06-04 02:58:41] 2025-06-04 06:58:22,201 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 02:58:41] 2025-06-04 06:58:22,202 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678244384/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:58:41] 2025-06-04 06:58:22,202 | INFO     | extracted standard info from prmon json
[2025-06-04 02:58:41] 2025-06-04 06:58:22,202 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:58:41] 2025-06-04 06:58:22,202 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:58:41] 2025-06-04 06:58:22,203 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:58:41] 2025-06-04 06:58:22,203 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:58:41] 2025-06-04 06:58:22,204 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:58:41] 2025-06-04 06:58:22,204 | INFO     | sum of square deviations: 101843770.0
[2025-06-04 02:58:41] 2025-06-04 06:58:22,204 | INFO     | sum of deviations: -2017042469.9999998
[2025-06-04 02:58:41] 2025-06-04 06:58:22,204 | INFO     | mean x: 1749018070.0
[2025-06-04 02:58:41] 2025-06-04 06:58:22,204 | INFO     | mean y: 2593216.5942028984
[2025-06-04 02:58:41] 2025-06-04 06:58:22,204 | INFO     | -- intersect: 34642352997.5551
[2025-06-04 02:58:41] 2025-06-04 06:58:22,204 | INFO     | intersect: 34642352997.5551
[2025-06-04 02:58:41] 2025-06-04 06:58:22,205 | INFO     | chi2: 0.036511914580300064
[2025-06-04 02:58:41] 2025-06-04 06:58:22,205 | INFO     | -- intersect: 34642352997.5551
[2025-06-04 02:58:41] 2025-06-04 06:58:22,205 | INFO     | current memory leak: -19.81 B/s (using 69 data points, chi2=0.04)
[2025-06-04 02:58:41] 2025-06-04 06:58:22,205 | INFO     | ..............................
[2025-06-04 02:58:41] 2025-06-04 06:58:22,205 | INFO     | . Timing measurements:
[2025-06-04 02:58:41] 2025-06-04 06:58:22,205 | INFO     | . get job = 0 s
[2025-06-04 02:58:41] 2025-06-04 06:58:22,205 | INFO     | . initial setup = 2 s
[2025-06-04 02:58:41] 2025-06-04 06:58:22,205 | INFO     | . payload setup = 6 s
[2025-06-04 02:58:41] 2025-06-04 06:58:22,205 | INFO     | . stage-in = 0 s
[2025-06-04 02:58:41] 2025-06-04 06:58:22,205 | INFO     | . payload execution = 4605 s
[2025-06-04 02:58:41] 2025-06-04 06:58:22,205 | INFO     | . stage-out = 0 s
[2025-06-04 02:58:41] 2025-06-04 06:58:22,205 | INFO     | . log creation = 0 s
[2025-06-04 02:58:41] 2025-06-04 06:58:22,206 | INFO     | ..............................
[2025-06-04 02:58:41] 2025-06-04 06:58:22,273 | INFO     | 
[2025-06-04 02:58:41] 2025-06-04 06:58:22,273 | INFO     | job summary report
[2025-06-04 02:58:41] 2025-06-04 06:58:22,273 | INFO     | --------------------------------------------------
[2025-06-04 02:58:41] 2025-06-04 06:58:22,273 | INFO     | PanDA job id: 6678244384
[2025-06-04 02:58:41] 2025-06-04 06:58:22,274 | INFO     | task id: 45006595
[2025-06-04 02:58:41] 2025-06-04 06:58:22,274 | INFO     | errors: (none)
[2025-06-04 02:58:41] 2025-06-04 06:58:22,274 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:58:41] 2025-06-04 06:58:22,274 | INFO     | pilot state: finished 
[2025-06-04 02:58:41] 2025-06-04 06:58:22,275 | INFO     | transexitcode: 0
[2025-06-04 02:58:41] 2025-06-04 06:58:22,275 | INFO     | exeerrorcode: 0
[2025-06-04 02:58:41] 2025-06-04 06:58:22,275 | INFO     | exeerrordiag: 
[2025-06-04 02:58:41] 2025-06-04 06:58:22,275 | INFO     | exitcode: 0
[2025-06-04 02:58:41] 2025-06-04 06:58:22,275 | INFO     | exitmsg: OK
[2025-06-04 02:58:41] 2025-06-04 06:58:22,275 | INFO     | cpuconsumptiontime: 39035 s
[2025-06-04 02:58:41] 2025-06-04 06:58:22,276 | INFO     | nevents: 400
[2025-06-04 02:58:41] 2025-06-04 06:58:22,276 | INFO     | neventsw: 0
[2025-06-04 02:58:41] 2025-06-04 06:58:22,276 | INFO     | pid: 12387
[2025-06-04 02:58:41] 2025-06-04 06:58:22,276 | INFO     | pgrp: 12387
[2025-06-04 02:58:41] 2025-06-04 06:58:22,276 | INFO     | corecount: 10
[2025-06-04 02:58:41] 2025-06-04 06:58:22,277 | INFO     | event service: False
[2025-06-04 02:58:41] 2025-06-04 06:58:22,277 | INFO     | sizes: {0: 2405184, 1: 2405184, 4: 2405418, 11: 2405446, 4614: 2431586, 4615: 2440710, 4617: 2440710, 4622: 2440880}
[2025-06-04 02:58:41] 2025-06-04 06:58:22,277 | INFO     | --------------------------------------------------
[2025-06-04 02:58:41] 2025-06-04 06:58:22,277 | INFO     | 
[2025-06-04 02:58:41] 2025-06-04 06:58:22,277 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 02:58:41] 2025-06-04 06:58:22,295 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,296 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,296 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,296 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,297 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,297 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,298 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,298 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,298 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,298 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,298 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,298 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,298 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,299 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:58:41] 2025-06-04 06:58:22,299 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,299 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:58:41] 2025-06-04 06:58:22,299 | INFO     | job 6678244384 has completed (purged errors)
[2025-06-04 02:58:41] 2025-06-04 06:58:22,299 | INFO     | overall cleanup function is called
[2025-06-04 02:58:41] 2025-06-04 06:58:23,309 | INFO     | --- collectZombieJob: --- 10, [12387]
[2025-06-04 02:58:41] 2025-06-04 06:58:23,309 | INFO     | zombie collector waiting for pid 12387
[2025-06-04 02:58:41] 2025-06-04 06:58:23,309 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:58:41] 2025-06-04 06:58:23,309 | INFO     | collected zombie processes
[2025-06-04 02:58:41] 2025-06-04 06:58:23,309 | INFO     | will attempt to kill all subprocesses of pid=12387
[2025-06-04 02:58:41] 2025-06-04 06:58:23,489 | INFO     | process IDs to be killed: [12387] (in reverse order)
[2025-06-04 02:58:41] 2025-06-04 06:58:23,566 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:58:41] 2025-06-04 06:58:23,566 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:58:41] 2025-06-04 06:58:23,571 | INFO     | did not find any defunct processes belonging to 12387
[2025-06-04 02:58:41] 2025-06-04 06:58:23,576 | INFO     | did not find any defunct processes belonging to 12387
[2025-06-04 02:58:41] 2025-06-04 06:58:23,576 | INFO     | ready for new job
[2025-06-04 02:58:41] 2025-06-04 06:58:23,576 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:58:41] 2025-06-04 06:58:23,577 | INFO     | **************************************
[2025-06-04 02:58:41] 2025-06-04 06:58:23,578 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:58:41] 2025-06-04 06:58:23,578 | INFO     | **************************************
[2025-06-04 02:58:41] 2025-06-04 06:58:23,578 | INFO     | 
[2025-06-04 02:58:41] 2025-06-04 06:58:23,580 | INFO     | architecture information:
[2025-06-04 02:58:41] 2025-06-04 06:58:23,580 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:58:41] 2025-06-04 06:58:23,594 | INFO     | cat /etc/os-release:
[2025-06-04 02:58:41] NAME="CentOS Linux"
[2025-06-04 02:58:41] VERSION="7 (Core)"
[2025-06-04 02:58:41] ID="centos"
[2025-06-04 02:58:41] ID_LIKE="rhel fedora"
[2025-06-04 02:58:41] VERSION_ID="7"
[2025-06-04 02:58:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:58:41] ANSI_COLOR="0;31"
[2025-06-04 02:58:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:58:41] HOME_URL="https://www.centos.org/"
[2025-06-04 02:58:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:58:41] 
[2025-06-04 02:58:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:58:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:58:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:58:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:58:41] 
[2025-06-04 02:58:41] 2025-06-04 06:58:23,594 | INFO     | **************************************
[2025-06-04 02:58:41] 2025-06-04 06:58:24,100 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 02:58:41] 2025-06-04 06:58:24,121 | INFO     | sufficient remaining disk space (57105448960 B)
[2025-06-04 02:58:41] 2025-06-04 06:58:24,121 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:58:41] 2025-06-04 06:58:24,121 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:58:41] 2025-06-04 06:58:24,122 | INFO     | update_server=False
[2025-06-04 02:58:41] 2025-06-04 06:58:24,122 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:58:41] 2025-06-04 06:58:24,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:58:41] 2025-06-04 06:58:24,122 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:58:41] 2025-06-04 06:58:24,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:58:41] 2025-06-04 06:58:24,122 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 02:58:41] 2025-06-04 06:58:24,123 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:58:41] 2025-06-04 06:58:24,123 | INFO     | aborting loop
[2025-06-04 02:58:41] 2025-06-04 06:58:24,124 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:58:41] 2025-06-04 06:58:24,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:58:41] 2025-06-04 06:58:24,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:58:41] 2025-06-04 06:58:24,549 | INFO     | all data control threads have been joined
[2025-06-04 02:58:41] 2025-06-04 06:58:25,123 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:25,127 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:25,129 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:25,168 | INFO     | all payload control threads have been joined
[2025-06-04 02:58:41] 2025-06-04 06:58:25,172 | INFO     | all job control threads have been joined
[2025-06-04 02:58:41] 2025-06-04 06:58:25,359 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:25,549 | INFO     | [data] control thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:25,635 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:25,790 | INFO     | [job] validate thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:25,847 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:26,115 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:26,119 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:26,129 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:26,173 | INFO     | [payload] control thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:26,175 | INFO     | [job] control thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:26,250 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:28,129 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:34,542 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:58:41] 2025-06-04 06:58:35,547 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:58:41] 2025-06-04 06:58:36,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139900226438976)>', '<ExcThread(monitor, started 139899919374080)>']
[2025-06-04 02:58:41] 2025-06-04 06:58:37,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:58:41] 2025-06-04 06:58:37,183 | INFO     | [monitor] control thread has ended
[2025-06-04 02:58:41] 2025-06-04 06:58:41,234 | INFO     | all workflow threads have been joined
[2025-06-04 02:58:41] 2025-06-04 06:58:41,234 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:58:41] 2025-06-04 06:58:41,235 | INFO     | traces error code: 0
[2025-06-04 02:58:41] 2025-06-04 06:58:41,235 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:58:41] 2025-06-04 06:58:41,348 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:58:41] 2025-06-04 06:58:41,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:58:41] 2025-06-04 06:58:41,354 [wrapper] pilotpid: 5833
[2025-06-04 02:58:41] 2025-06-04 06:58:41,360 [wrapper] Pilot exit status: 0
[2025-06-04 02:58:41] 2025-06-04 06:58:41,371 [wrapper] pandaids: 6678244384
[2025-06-04 02:58:41] 2025-06-04 06:58:41,415 [wrapper] cleanup supervisor_pilot 13458 5834
[2025-06-04 02:58:41] 2025-06-04 06:58:41,418 [wrapper] Test setup, not cleaning
[2025-06-04 02:58:41] 2025-06-04 06:58:41,420 [wrapper] apfmon messages muted
[2025-06-04 02:58:41] 2025-06-04 06:58:41,423 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:58:41] 2025-06-04 06:58:41,425 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:58:41]  *** Error codes and diagnostics ***
[2025-06-04 02:58:41]     "exeErrorCode": 0,
[2025-06-04 02:58:41]     "exeErrorDiag": "",
[2025-06-04 02:58:41]     "pilotErrorCode": 0,
[2025-06-04 02:58:41]     "pilotErrorDiag": "",
[2025-06-04 02:58:41]  *** Listing of results directory ***
[2025-06-04 02:58:41] total 391656
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 19:58 pilot3.tar.gz
[2025-06-04 02:58:41] -rwx------ 1 boincer umatlas     37140 Jun  3 20:48 runpilot2-wrapper.sh
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 20:48 queuedata.json
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas       100 Jun  4 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:58:41] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 01:40 run_atlas
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas       105 Jun  4 01:40 job.xml
[2025-06-04 02:58:41] -rw-r--r-- 2 boincer umatlas 218004305 Jun  4 01:40 EVNT.45006593._001980.pool.root.1
[2025-06-04 02:58:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:40 start_atlas.sh
[2025-06-04 02:58:41] drwxrwx--x 2 boincer umatlas      4096 Jun  4 01:40 shared
[2025-06-04 02:58:41] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 01:40 input.tar.gz
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas         0 Jun  4 01:40 boinc_lockfile
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 01:40 pandaJob.out
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas    986745 Jun  4 01:41 agis_schedconf.cvmfs.json
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas   1603667 Jun  4 01:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:58:41] drwx------ 4 boincer umatlas      4096 Jun  4 01:41 pilot3
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas 177619881 Jun  4 02:57 HITS.45006595._049389.pool.root.1
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas       529 Jun  4 02:57 boinc_task_state.xml
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas        95 Jun  4 02:58 pilot_heartbeat.json
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas      1054 Jun  4 02:58 memory_monitor_summary.json
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas    343858 Jun  4 02:58 log.45006595._049389.job.log.tgz.1
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas      7747 Jun  4 02:58 heartbeat.json
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas      6227 Jun  4 02:58 init_data.xml
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 02:58 boinc_mmap_file
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas        27 Jun  4 02:58 wrapper_checkpoint.txt
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas      4548 Jun  4 02:58 pilotlog.txt
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas    458076 Jun  4 02:58 log.45006595._049389.job.log.1
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas       357 Jun  4 02:58 output.list
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas       620 Jun  4 02:58 runtime_log
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas    819200 Jun  4 02:58 result.tar.gz
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas       657 Jun  4 02:58 YUCNDmXUrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmMPaKDm4eM2Zn.diag
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 02:58 runtime_log.err
[2025-06-04 02:58:41] -rw-r--r-- 1 boincer umatlas     21415 Jun  4 02:58 stderr.txt
[2025-06-04 02:58:41] HITS file was successfully produced:
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas 177619881 Jun  4 02:57 shared/HITS.pool.root.1
[2025-06-04 02:58:41]  *** Contents of shared directory: ***
[2025-06-04 02:58:41] total 387676
[2025-06-04 02:58:41] -rw-r--r-- 2 boincer umatlas 218004305 Jun  4 01:40 ATLAS.root_0
[2025-06-04 02:58:41] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:40 start_atlas.sh
[2025-06-04 02:58:41] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 01:40 input.tar.gz
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas 177619881 Jun  4 02:57 HITS.pool.root.1
[2025-06-04 02:58:41] -rw------- 1 boincer umatlas    819200 Jun  4 02:58 result.tar.gz
02:58:42 (2084): run_atlas exited; CPU time 39039.020320
02:58:42 (2084): called boinc_finish(0)

</stderr_txt>
]]>

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