Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:36:35 (27266): wrapper (7.7.26015): starting
01:36:35 (27266): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 01:36:35] Arguments: --nthreads 12
[2025-06-04 01:36:35] Threads: 12
[2025-06-04 01:36:35] Checking for CVMFS
[2025-06-04 01:36:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:36:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:36:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:36:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:36:35] 2.11.2.0 2981 35224 87148 146769 2 56 18256059 20275201 1 130560 0 16168188 99.982 6686997 7953 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 01:36:35] CVMFS is ok
[2025-06-04 01:36:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:36:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:36:35] Further information can be found at the LHC@home message board.
[2025-06-04 01:36:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:36:35] Checking for apptainer binary...
[2025-06-04 01:36:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:36:35] Running /usr/bin/apptainer --version
[2025-06-04 01:36:36] apptainer version 1.3.2-1.el7
[2025-06-04 01:36:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:36:37] c-205-30.aglt2.org
[2025-06-04 01:36:37] apptainer works
[2025-06-04 01:36:37] Set ATHENA_PROC_NUMBER=12
[2025-06-04 01:36:37] Set ATHENA_CORE_NUMBER=12
[2025-06-04 01:36:37] Starting ATLAS job with PandaID=6678152279
[2025-06-04 01:36:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:42:28]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:42:28]  filetype=log
[2025-06-04 02:42:28]  guid=6cebe491-05dd-4da0-84b9-bb4a676d07d3
[2025-06-04 02:42:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 02:42:28]  is_altstaged=None
[2025-06-04 02:42:28]  is_tar=False
[2025-06-04 02:42:28]  lfn=log.45006595._047056.job.log.tgz.1
[2025-06-04 02:42:28]  mtime=0
[2025-06-04 02:42:28]  protocol_id=None
[2025-06-04 02:42:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 02:42:28]  replicas=None
[2025-06-04 02:42:28]  scope=mc23_13p6TeV
[2025-06-04 02:42:28]  status=None
[2025-06-04 02:42:28]  status_code=0
[2025-06-04 02:42:28]  storage_token=
[2025-06-04 02:42:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678152279/log.45006595._047056.job.log.tgz.1
[2025-06-04 02:42:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/2f/log.45006595._047056.job.log.tgz.1
[2025-06-04 02:42:28]  workdir=None
[2025-06-04 02:42:28] ]
[2025-06-04 02:42:28] 2025-06-04 06:41:59,906 | INFO     | transferring file log.45006595._047056.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678152279/log.45006595._047056.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:42:28] 2025-06-04 06:41:59,907 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678152279/log.45006595._047056.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._047056.job
[2025-06-04 02:42:28] 2025-06-04 06:41:59,931 | INFO     | adding to output.list: log.45006595._047056.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/43/2f/log.45006595._047056.job.log.tg
[2025-06-04 02:42:28] 2025-06-04 06:41:59,932 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:42:28] 2025-06-04 06:41:59,932 | INFO     | summary of transferred files:
[2025-06-04 02:42:28] 2025-06-04 06:41:59,932 | INFO     |  -- lfn=log.45006595._047056.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:42:28] 2025-06-04 06:41:59,933 | INFO     | stage-out finished correctly
[2025-06-04 02:42:28] 2025-06-04 06:42:02,660 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:42:28] 2025-06-04 06:42:03,261 | INFO     | job 6678152279 has state=finished
[2025-06-04 02:42:28] 2025-06-04 06:42:03,261 | INFO     | preparing for final server update for job 6678152279 in state='finished'
[2025-06-04 02:42:28] 2025-06-04 06:42:03,262 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:42:28] 2025-06-04 06:42:03,262 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:42:28] 2025-06-04 06:42:03,262 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:42:28] 2025-06-04 06:42:03,262 | INFO     | job 6678152279 has finished - writing final server update
[2025-06-04 02:42:28] 2025-06-04 06:42:03,263 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:42:28] 2025-06-04 06:42:03,264 | INFO     | executing command: lscpu
[2025-06-04 02:42:28] 2025-06-04 06:42:03,293 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:42:28] 2025-06-04 06:42:05,604 | WARNING  | process 5930 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 02:42:28] 2025-06-04 06:42:05,604 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678152279/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:42:28] 2025-06-04 06:42:05,692 | INFO     | number of running child processes to parent process 5930: 1
[2025-06-04 02:42:28] 2025-06-04 06:42:05,692 | INFO     | maximum number of monitored processes: 6
[2025-06-04 02:42:28] 2025-06-04 06:42:07,792 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 02:42:28] 2025-06-04 06:42:07,792 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678152279/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:42:28] 2025-06-04 06:42:07,793 | INFO     | extracted standard info from prmon json
[2025-06-04 02:42:28] 2025-06-04 06:42:07,793 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:42:28] 2025-06-04 06:42:07,793 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:42:28] 2025-06-04 06:42:07,794 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:42:28] 2025-06-04 06:42:07,794 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:42:28] 2025-06-04 06:42:07,796 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:42:28] 2025-06-04 06:42:07,796 | INFO     | sum of square deviations: 57407588.0
[2025-06-04 02:42:28] 2025-06-04 06:42:07,797 | INFO     | sum of deviations: -6200315719.999998
[2025-06-04 02:42:28] 2025-06-04 06:42:07,797 | INFO     | mean x: 1749017454.0
[2025-06-04 02:42:28] 2025-06-04 06:42:07,797 | INFO     | mean y: 2795189.6666666665
[2025-06-04 02:42:28] 2025-06-04 06:42:07,797 | INFO     | -- intersect: 188905704933.7683
[2025-06-04 02:42:28] 2025-06-04 06:42:07,797 | INFO     | intersect: 188905704933.7683
[2025-06-04 02:42:28] 2025-06-04 06:42:07,798 | INFO     | chi2: 0.04354651079330461
[2025-06-04 02:42:28] 2025-06-04 06:42:07,798 | INFO     | -- intersect: 188905704933.7683
[2025-06-04 02:42:28] 2025-06-04 06:42:07,798 | INFO     | current memory leak: -108.01 B/s (using 57 data points, chi2=0.04)
[2025-06-04 02:42:28] 2025-06-04 06:42:07,799 | INFO     | ..............................
[2025-06-04 02:42:28] 2025-06-04 06:42:07,799 | INFO     | . Timing measurements:
[2025-06-04 02:42:28] 2025-06-04 06:42:07,799 | INFO     | . get job = 0 s
[2025-06-04 02:42:28] 2025-06-04 06:42:07,799 | INFO     | . initial setup = 2 s
[2025-06-04 02:42:28] 2025-06-04 06:42:07,799 | INFO     | . payload setup = 9 s
[2025-06-04 02:42:28] 2025-06-04 06:42:07,799 | INFO     | . stage-in = 0 s
[2025-06-04 02:42:28] 2025-06-04 06:42:07,800 | INFO     | . payload execution = 3879 s
[2025-06-04 02:42:28] 2025-06-04 06:42:07,800 | INFO     | . stage-out = 0 s
[2025-06-04 02:42:28] 2025-06-04 06:42:07,800 | INFO     | . log creation = 0 s
[2025-06-04 02:42:28] 2025-06-04 06:42:07,800 | INFO     | ..............................
[2025-06-04 02:42:28] 2025-06-04 06:42:07,885 | INFO     | 
[2025-06-04 02:42:28] 2025-06-04 06:42:07,885 | INFO     | job summary report
[2025-06-04 02:42:28] 2025-06-04 06:42:07,885 | INFO     | --------------------------------------------------
[2025-06-04 02:42:28] 2025-06-04 06:42:07,886 | INFO     | PanDA job id: 6678152279
[2025-06-04 02:42:28] 2025-06-04 06:42:07,886 | INFO     | task id: 45006595
[2025-06-04 02:42:28] 2025-06-04 06:42:07,886 | INFO     | errors: (none)
[2025-06-04 02:42:28] 2025-06-04 06:42:07,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:42:28] 2025-06-04 06:42:07,886 | INFO     | pilot state: finished 
[2025-06-04 02:42:28] 2025-06-04 06:42:07,886 | INFO     | transexitcode: 0
[2025-06-04 02:42:28] 2025-06-04 06:42:07,887 | INFO     | exeerrorcode: 0
[2025-06-04 02:42:28] 2025-06-04 06:42:07,887 | INFO     | exeerrordiag: 
[2025-06-04 02:42:28] 2025-06-04 06:42:07,887 | INFO     | exitcode: 0
[2025-06-04 02:42:28] 2025-06-04 06:42:07,887 | INFO     | exitmsg: OK
[2025-06-04 02:42:28] 2025-06-04 06:42:07,887 | INFO     | cpuconsumptiontime: 42143 s
[2025-06-04 02:42:28] 2025-06-04 06:42:07,887 | INFO     | nevents: 400
[2025-06-04 02:42:28] 2025-06-04 06:42:07,887 | INFO     | neventsw: 0
[2025-06-04 02:42:28] 2025-06-04 06:42:07,888 | INFO     | pid: 5930
[2025-06-04 02:42:28] 2025-06-04 06:42:07,888 | INFO     | pgrp: 5930
[2025-06-04 02:42:28] 2025-06-04 06:42:07,888 | INFO     | corecount: 12
[2025-06-04 02:42:28] 2025-06-04 06:42:07,888 | INFO     | event service: False
[2025-06-04 02:42:28] 2025-06-04 06:42:07,888 | INFO     | sizes: {0: 2405183, 5: 2405389, 11: 2405445, 3893: 2431096, 3894: 2440037, 3897: 2440093, 3902: 2440391}
[2025-06-04 02:42:28] 2025-06-04 06:42:07,888 | INFO     | --------------------------------------------------
[2025-06-04 02:42:28] 2025-06-04 06:42:07,888 | INFO     | 
[2025-06-04 02:42:28] 2025-06-04 06:42:07,889 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:42:28] 2025-06-04 06:42:07,913 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,914 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,914 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,914 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,914 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,914 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,914 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,916 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:42:28] 2025-06-04 06:42:07,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:42:28] 2025-06-04 06:42:07,916 | INFO     | job 6678152279 has completed (purged errors)
[2025-06-04 02:42:28] 2025-06-04 06:42:07,917 | INFO     | overall cleanup function is called
[2025-06-04 02:42:28] 2025-06-04 06:42:08,925 | INFO     | --- collectZombieJob: --- 10, [5930]
[2025-06-04 02:42:28] 2025-06-04 06:42:08,925 | INFO     | zombie collector waiting for pid 5930
[2025-06-04 02:42:28] 2025-06-04 06:42:08,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:42:28] 2025-06-04 06:42:08,926 | INFO     | collected zombie processes
[2025-06-04 02:42:28] 2025-06-04 06:42:08,926 | INFO     | will attempt to kill all subprocesses of pid=5930
[2025-06-04 02:42:28] 2025-06-04 06:42:09,016 | INFO     | process IDs to be killed: [5930] (in reverse order)
[2025-06-04 02:42:28] 2025-06-04 06:42:09,068 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:42:28] 2025-06-04 06:42:09,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:42:28] 2025-06-04 06:42:09,071 | INFO     | did not find any defunct processes belonging to 5930
[2025-06-04 02:42:28] 2025-06-04 06:42:09,073 | INFO     | did not find any defunct processes belonging to 5930
[2025-06-04 02:42:28] 2025-06-04 06:42:09,074 | INFO     | ready for new job
[2025-06-04 02:42:28] 2025-06-04 06:42:09,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:42:28] 2025-06-04 06:42:09,075 | INFO     | **************************************
[2025-06-04 02:42:28] 2025-06-04 06:42:09,075 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:42:28] 2025-06-04 06:42:09,075 | INFO     | **************************************
[2025-06-04 02:42:28] 2025-06-04 06:42:09,075 | INFO     | 
[2025-06-04 02:42:28] 2025-06-04 06:42:09,076 | INFO     | architecture information:
[2025-06-04 02:42:28] 2025-06-04 06:42:09,076 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:42:28] 2025-06-04 06:42:09,092 | INFO     | cat /etc/os-release:
[2025-06-04 02:42:28] NAME="CentOS Linux"
[2025-06-04 02:42:28] VERSION="7 (Core)"
[2025-06-04 02:42:28] ID="centos"
[2025-06-04 02:42:28] ID_LIKE="rhel fedora"
[2025-06-04 02:42:28] VERSION_ID="7"
[2025-06-04 02:42:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:42:28] ANSI_COLOR="0;31"
[2025-06-04 02:42:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:42:28] HOME_URL="https://www.centos.org/"
[2025-06-04 02:42:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:42:28] 
[2025-06-04 02:42:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:42:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:42:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:42:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:42:28] 
[2025-06-04 02:42:28] 2025-06-04 06:42:09,092 | INFO     | **************************************
[2025-06-04 02:42:28] 2025-06-04 06:42:09,595 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:42:28] 2025-06-04 06:42:09,611 | INFO     | sufficient remaining disk space (29411508224 B)
[2025-06-04 02:42:28] 2025-06-04 06:42:09,612 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:42:28] 2025-06-04 06:42:09,612 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:42:28] 2025-06-04 06:42:09,612 | INFO     | update_server=False
[2025-06-04 02:42:28] 2025-06-04 06:42:09,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:42:28] 2025-06-04 06:42:09,613 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 02:42:28] 2025-06-04 06:42:09,613 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:42:28] 2025-06-04 06:42:09,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:42:28] 2025-06-04 06:42:09,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:42:28] 2025-06-04 06:42:09,614 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:42:28] 2025-06-04 06:42:09,615 | INFO     | aborting loop
[2025-06-04 02:42:28] 2025-06-04 06:42:09,614 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:42:28] 2025-06-04 06:42:09,614 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:42:28] 2025-06-04 06:42:10,348 | INFO     | all data control threads have been joined
[2025-06-04 02:42:28] 2025-06-04 06:42:10,532 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:42:28] 2025-06-04 06:42:10,589 | INFO     | all payload control threads have been joined
[2025-06-04 02:42:28] 2025-06-04 06:42:10,618 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:10,620 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:10,620 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:10,663 | INFO     | all job control threads have been joined
[2025-06-04 02:42:28] 2025-06-04 06:42:11,087 | INFO     | [job] validate thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:11,165 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:11,211 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:11,320 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:11,354 | INFO     | [data] control thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:11,466 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:11,591 | INFO     | [payload] control thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:11,669 | INFO     | [job] control thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:11,909 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:11,977 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:12,538 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:13,621 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:20,476 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:42:28] 2025-06-04 06:42:21,481 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:42:28] 2025-06-04 06:42:23,249 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651505989440)>', '<ExcThread(monitor, started 139650752554752)>']
[2025-06-04 02:42:28] 2025-06-04 06:42:23,685 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:42:28] 2025-06-04 06:42:23,685 | INFO     | [monitor] control thread has ended
[2025-06-04 02:42:28] 2025-06-04 06:42:28,275 | INFO     | all workflow threads have been joined
[2025-06-04 02:42:28] 2025-06-04 06:42:28,277 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:42:28] 2025-06-04 06:42:28,277 | INFO     | traces error code: 0
[2025-06-04 02:42:28] 2025-06-04 06:42:28,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:42:28] 2025-06-04 06:42:28,374 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:42:28] 2025-06-04 06:42:28,378 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:42:28] 2025-06-04 06:42:28,381 [wrapper] pilotpid: 30848
[2025-06-04 02:42:28] 2025-06-04 06:42:28,385 [wrapper] Pilot exit status: 0
[2025-06-04 02:42:28] 2025-06-04 06:42:28,401 [wrapper] pandaids: 6678152279
[2025-06-04 02:42:28] 2025-06-04 06:42:28,438 [wrapper] cleanup supervisor_pilot  7838 30849
[2025-06-04 02:42:28] 2025-06-04 06:42:28,441 [wrapper] Test setup, not cleaning
[2025-06-04 02:42:28] 2025-06-04 06:42:28,445 [wrapper] apfmon messages muted
[2025-06-04 02:42:28] 2025-06-04 06:42:28,449 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:42:28] 2025-06-04 06:42:28,453 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:42:28]  *** Error codes and diagnostics ***
[2025-06-04 02:42:28]     "exeErrorCode": 0,
[2025-06-04 02:42:28]     "exeErrorDiag": "",
[2025-06-04 02:42:28]     "pilotErrorCode": 0,
[2025-06-04 02:42:28]     "pilotErrorDiag": "",
[2025-06-04 02:42:28]  *** Listing of results directory ***
[2025-06-04 02:42:28] total 394576
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 17:57 pilot3.tar.gz
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 18:31 queuedata.json
[2025-06-04 02:42:28] -rwx------ 1 boincer umatlas     37140 Jun  3 18:32 runpilot2-wrapper.sh
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas       100 Jun  4 01:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:42:28] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 01:36 run_atlas
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas       105 Jun  4 01:36 job.xml
[2025-06-04 02:42:28] -rw-r--r-- 2 boincer umatlas 215804436 Jun  4 01:36 EVNT.45006593._001886.pool.root.1
[2025-06-04 02:42:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:36 start_atlas.sh
[2025-06-04 02:42:28] drwxrwx--x 2 boincer umatlas      4096 Jun  4 01:36 shared
[2025-06-04 02:42:28] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 01:36 input.tar.gz
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas         0 Jun  4 01:36 boinc_lockfile
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas      2524 Jun  4 01:36 pandaJob.out
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas    986745 Jun  4 01:36 agis_schedconf.cvmfs.json
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas   1603667 Jun  4 01:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:42:28] drwx------ 4 boincer umatlas      4096 Jun  4 01:36 pilot3
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 02:36 init_data.xml
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas 182909990 Jun  4 02:41 HITS.45006595._047056.pool.root.1
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas        95 Jun  4 02:41 pilot_heartbeat.json
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas       529 Jun  4 02:41 boinc_task_state.xml
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas      1048 Jun  4 02:41 memory_monitor_summary.json
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas    369886 Jun  4 02:41 log.45006595._047056.job.log.tgz.1
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas      7754 Jun  4 02:42 heartbeat.json
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas        27 Jun  4 02:42 wrapper_checkpoint.txt
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 02:42 boinc_mmap_file
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas      4548 Jun  4 02:42 pilotlog.txt
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas    381157 Jun  4 02:42 log.45006595._047056.job.log.1
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas       357 Jun  4 02:42 output.list
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas       620 Jun  4 02:42 runtime_log
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas    768000 Jun  4 02:42 result.tar.gz
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 02:42 runtime_log.err
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas       659 Jun  4 02:42 72OLDmDMpg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmi9ZKDmVXbYYo.diag
[2025-06-04 02:42:28] -rw-r--r-- 1 boincer umatlas     21169 Jun  4 02:42 stderr.txt
[2025-06-04 02:42:28] HITS file was successfully produced:
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas 182909990 Jun  4 02:41 shared/HITS.pool.root.1
[2025-06-04 02:42:28]  *** Contents of shared directory: ***
[2025-06-04 02:42:28] total 390640
[2025-06-04 02:42:28] -rw-r--r-- 2 boincer umatlas 215804436 Jun  4 01:36 ATLAS.root_0
[2025-06-04 02:42:28] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:36 start_atlas.sh
[2025-06-04 02:42:28] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 01:36 input.tar.gz
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas 182909990 Jun  4 02:41 HITS.pool.root.1
[2025-06-04 02:42:28] -rw------- 1 boincer umatlas    768000 Jun  4 02:42 result.tar.gz
02:42:30 (27266): run_atlas exited; CPU time 42123.506474
02:42:30 (27266): called boinc_finish(0)

</stderr_txt>
]]>

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