Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:57:59 (2280143): wrapper (7.7.26015): starting
01:57:59 (2280143): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:57:59] Arguments: --nthreads 8
[2025-06-04 01:57:59] Threads: 8
[2025-06-04 01:57:59] Checking for CVMFS
[2025-06-04 01:57:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:57:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:57:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:57:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:57:59] 2.12.6.0 1132244 22907 197692 146769 1 463 40089534 40960000 21244 16776704 0 275639119 99.776 162812852 36817 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 01:57:59] CVMFS is ok
[2025-06-04 01:57:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:57:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:57:59] Further information can be found at the LHC@home message board.
[2025-06-04 01:57:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:57:59] Checking for apptainer binary...
[2025-06-04 01:57:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:57:59] Running /usr/bin/apptainer --version
[2025-06-04 01:58:00] apptainer version 1.4.1-1.el9
[2025-06-04 01:58:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:58:00] c8-7-3.aglt2.org
[2025-06-04 01:58:00] apptainer works
[2025-06-04 01:58:00] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:58:00] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:58:00] Starting ATLAS job with PandaID=6678218437
[2025-06-04 01:58:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:47:08]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:47:08]  is_altstaged=None
[2025-06-04 02:47:08]  is_tar=False
[2025-06-04 02:47:08]  lfn=log.45006595._049249.job.log.tgz.1
[2025-06-04 02:47:08]  mtime=0
[2025-06-04 02:47:08]  protocol_id=None
[2025-06-04 02:47:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 02:47:08]  replicas=None
[2025-06-04 02:47:08]  scope=mc23_13p6TeV
[2025-06-04 02:47:08]  status=None
[2025-06-04 02:47:08]  status_code=0
[2025-06-04 02:47:08]  storage_token=
[2025-06-04 02:47:08]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6678218437/log.45006595._049249.job.log.tgz.1
[2025-06-04 02:47:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/50/log.45006595._049249.job.log.tgz.1
[2025-06-04 02:47:08]  workdir=None
[2025-06-04 02:47:08] ]
[2025-06-04 02:47:08] 2025-06-04 06:46:39,126 | INFO     | transferring file log.45006595._049249.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6678218437/log.45006595._049249.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:47:08] 2025-06-04 06:46:39,127 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6678218437/log.45006595._049249.job.log.tgz.1 /tmp/boinchome/slots/1/log.45006595._049249.job
[2025-06-04 02:47:08] 2025-06-04 06:46:39,138 | INFO     | adding to output.list: log.45006595._049249.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/50/log.45006595._049249.job.log.tg
[2025-06-04 02:47:08] 2025-06-04 06:46:39,138 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:47:08] 2025-06-04 06:46:39,138 | INFO     | summary of transferred files:
[2025-06-04 02:47:08] 2025-06-04 06:46:39,138 | INFO     |  -- lfn=log.45006595._049249.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:47:08] 2025-06-04 06:46:39,138 | INFO     | stage-out finished correctly
[2025-06-04 02:47:08] 2025-06-04 06:46:39,873 | INFO     | monitor loop #216: job 0:6678218437 is in state 'finished'
[2025-06-04 02:47:08] 2025-06-04 06:46:39,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:47:08] 2025-06-04 06:46:41,982 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:47:08] 2025-06-04 06:46:42,374 | INFO     | monitor loop #217: job 0:6678218437 is in state 'finished'
[2025-06-04 02:47:08] 2025-06-04 06:46:42,374 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:47:08] 2025-06-04 06:46:44,818 | INFO     | job 6678218437 has state=finished
[2025-06-04 02:47:08] 2025-06-04 06:46:44,819 | INFO     | preparing for final server update for job 6678218437 in state='finished'
[2025-06-04 02:47:08] 2025-06-04 06:46:44,819 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:47:08] 2025-06-04 06:46:44,819 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:47:08] 2025-06-04 06:46:44,819 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:47:08] 2025-06-04 06:46:44,819 | INFO     | job 6678218437 has finished - writing final server update
[2025-06-04 02:47:08] 2025-06-04 06:46:44,819 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:47:08] 2025-06-04 06:46:44,836 | INFO     | executing command: lscpu
[2025-06-04 02:47:08] 2025-06-04 06:46:44,875 | INFO     | monitor loop #218: job 0:6678218437 is in state 'finished'
[2025-06-04 02:47:08] 2025-06-04 06:46:44,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:47:08] 2025-06-04 06:46:44,919 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:47:08] 2025-06-04 06:46:47,378 | INFO     | monitor loop #219: job 0:6678218437 is in state 'finished'
[2025-06-04 02:47:08] 2025-06-04 06:46:47,379 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:47:08] 2025-06-04 06:46:48,570 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 02:47:08] 2025-06-04 06:46:48,570 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6678218437/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:47:08] 2025-06-04 06:46:48,571 | INFO     | extracted standard info from prmon json
[2025-06-04 02:47:08] 2025-06-04 06:46:48,571 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:47:08] 2025-06-04 06:46:48,571 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:47:08] 2025-06-04 06:46:48,571 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:47:08] 2025-06-04 06:46:48,571 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:47:08] 2025-06-04 06:46:48,572 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:47:08] 2025-06-04 06:46:48,572 | INFO     | sum of square deviations: 21358540.0
[2025-06-04 02:47:08] 2025-06-04 06:46:48,572 | INFO     | sum of deviations: 4187135953.0
[2025-06-04 02:47:08] 2025-06-04 06:46:48,572 | INFO     | mean x: 1749018240.0
[2025-06-04 02:47:08] 2025-06-04 06:46:48,572 | INFO     | mean y: 2340523.6097560977
[2025-06-04 02:47:08] 2025-06-04 06:46:48,572 | INFO     | -- intersect: -342875831634.07434
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | intersect: -342875831634.07434
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | chi2: 0.6575668001010769
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | -- intersect: -342875831634.07434
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | current memory leak: 196.04 B/s (using 41 data points, chi2=0.66)
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | ..............................
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | . Timing measurements:
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | . get job = 0 s
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | . initial setup = 2 s
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | . payload setup = 5 s
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | . stage-in = 0 s
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | . payload execution = 2884 s
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | . stage-out = 0 s
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | . log creation = 0 s
[2025-06-04 02:47:08] 2025-06-04 06:46:48,573 | INFO     | ..............................
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | 
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | job summary report
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | --------------------------------------------------
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | PanDA job id: 6678218437
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | task id: 45006595
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | errors: (none)
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | pilot state: finished 
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | transexitcode: 0
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | exeerrorcode: 0
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | exeerrordiag: 
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | exitcode: 0
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | exitmsg: OK
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | cpuconsumptiontime: 18449 s
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | nevents: 400
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | neventsw: 0
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | pid: 2300693
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | pgrp: 2300693
[2025-06-04 02:47:08] 2025-06-04 06:46:48,629 | INFO     | corecount: 8
[2025-06-04 02:47:08] 2025-06-04 06:46:48,630 | INFO     | event service: False
[2025-06-04 02:47:08] 2025-06-04 06:46:48,630 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 2894: 2439719, 2897: 2439719, 2904: 2439889}
[2025-06-04 02:47:08] 2025-06-04 06:46:48,630 | INFO     | --------------------------------------------------
[2025-06-04 02:47:08] 2025-06-04 06:46:48,630 | INFO     | 
[2025-06-04 02:47:08] 2025-06-04 06:46:48,630 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-06-04 02:47:08] 2025-06-04 06:46:48,649 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,649 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,649 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,649 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,649 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,649 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,649 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,649 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,650 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,650 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,650 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,650 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,650 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:47:08] 2025-06-04 06:46:48,650 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,650 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:47:08] 2025-06-04 06:46:48,650 | INFO     | job 6678218437 has completed (purged errors)
[2025-06-04 02:47:08] 2025-06-04 06:46:48,650 | INFO     | overall cleanup function is called
[2025-06-04 02:47:08] 2025-06-04 06:46:49,657 | INFO     | --- collectZombieJob: --- 10, [2300693]
[2025-06-04 02:47:08] 2025-06-04 06:46:49,658 | INFO     | zombie collector waiting for pid 2300693
[2025-06-04 02:47:08] 2025-06-04 06:46:49,658 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:47:08] 2025-06-04 06:46:49,658 | INFO     | collected zombie processes
[2025-06-04 02:47:08] 2025-06-04 06:46:49,658 | INFO     | will attempt to kill all subprocesses of pid=2300693
[2025-06-04 02:47:08] 2025-06-04 06:46:50,001 | INFO     | process IDs to be killed: [2300693] (in reverse order)
[2025-06-04 02:47:08] 2025-06-04 06:46:50,134 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:47:08] 2025-06-04 06:46:50,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:47:08] 2025-06-04 06:46:50,155 | INFO     | did not find any defunct processes belonging to 2300693
[2025-06-04 02:47:08] 2025-06-04 06:46:50,173 | INFO     | did not find any defunct processes belonging to 2300693
[2025-06-04 02:47:08] 2025-06-04 06:46:50,173 | INFO     | ready for new job
[2025-06-04 02:47:08] 2025-06-04 06:46:50,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:47:08] 2025-06-04 06:46:50,174 | INFO     | **************************************
[2025-06-04 02:47:08] 2025-06-04 06:46:50,174 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:47:08] 2025-06-04 06:46:50,174 | INFO     | **************************************
[2025-06-04 02:47:08] 2025-06-04 06:46:50,174 | INFO     | 
[2025-06-04 02:47:08] 2025-06-04 06:46:50,192 | INFO     | architecture information:
[2025-06-04 02:47:08] 2025-06-04 06:46:50,192 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:47:08] 2025-06-04 06:46:50,206 | INFO     | cat /etc/os-release:
[2025-06-04 02:47:08] NAME="CentOS Linux"
[2025-06-04 02:47:08] VERSION="7 (Core)"
[2025-06-04 02:47:08] ID="centos"
[2025-06-04 02:47:08] ID_LIKE="rhel fedora"
[2025-06-04 02:47:08] VERSION_ID="7"
[2025-06-04 02:47:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:47:08] ANSI_COLOR="0;31"
[2025-06-04 02:47:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:47:08] HOME_URL="https://www.centos.org/"
[2025-06-04 02:47:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:47:08] 
[2025-06-04 02:47:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:47:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:47:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:47:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:47:08] 
[2025-06-04 02:47:08] 2025-06-04 06:46:50,206 | INFO     | **************************************
[2025-06-04 02:47:08] 2025-06-04 06:46:50,709 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-06-04 02:47:08] 2025-06-04 06:46:50,724 | INFO     | sufficient remaining disk space (172005261312 B)
[2025-06-04 02:47:08] 2025-06-04 06:46:50,724 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:47:08] 2025-06-04 06:46:50,724 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:47:08] 2025-06-04 06:46:50,724 | INFO     | update_server=False
[2025-06-04 02:47:08] 2025-06-04 06:46:50,724 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:47:08] 2025-06-04 06:46:50,793 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:47:08] 2025-06-04 06:46:50,793 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:47:08] 2025-06-04 06:46:50,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:47:08] 2025-06-04 06:46:50,829 | INFO     | all payload control threads have been joined
[2025-06-04 02:47:08] 2025-06-04 06:46:50,886 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:47:08] 2025-06-04 06:46:50,887 | INFO     | aborting loop
[2025-06-04 02:47:08] 2025-06-04 06:46:51,531 | INFO     | all data control threads have been joined
[2025-06-04 02:47:08] 2025-06-04 06:46:51,537 | INFO     | all job control threads have been joined
[2025-06-04 02:47:08] 2025-06-04 06:46:51,729 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:51,832 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:51,834 | INFO     | [payload] control thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:51,891 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:52,179 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:47:08] 2025-06-04 06:46:52,499 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:52,537 | INFO     | [data] control thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:52,540 | INFO     | [job] control thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:52,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:47:08] 2025-06-04 06:46:52,898 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:52,899 | INFO     | [job] validate thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:52,901 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:52,916 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:53,150 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:53,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:47:08] 2025-06-04 06:46:54,181 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:54,645 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:46:56,552 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:47:01,539 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:47:08] 2025-06-04 06:47:02,544 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:47:08] 2025-06-04 06:47:03,527 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140194452596544)>', '<ExcThread(monitor, started 140193831053056)>']
[2025-06-04 02:47:08] 2025-06-04 06:47:03,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:47:08] 2025-06-04 06:47:03,853 | INFO     | [monitor] control thread has ended
[2025-06-04 02:47:08] 2025-06-04 06:47:08,551 | INFO     | all workflow threads have been joined
[2025-06-04 02:47:08] 2025-06-04 06:47:08,552 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:47:08] 2025-06-04 06:47:08,552 | INFO     | traces error code: 0
[2025-06-04 02:47:08] 2025-06-04 06:47:08,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:47:08] 2025-06-04 06:47:08,702 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:47:08] 2025-06-04 06:47:08,705 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:47:08] 2025-06-04 06:47:08,706 [wrapper] pilotpid: 2285311
[2025-06-04 02:47:08] 2025-06-04 06:47:08,708 [wrapper] Pilot exit status: 0
[2025-06-04 02:47:08] 2025-06-04 06:47:08,717 [wrapper] pandaids: 6678218437
[2025-06-04 02:47:08] 2025-06-04 06:47:08,820 [wrapper] cleanup supervisor_pilot 2628854 2285312
[2025-06-04 02:47:08] 2025-06-04 06:47:08,823 [wrapper] Test setup, not cleaning
[2025-06-04 02:47:08] 2025-06-04 06:47:08,826 [wrapper] apfmon messages muted
[2025-06-04 02:47:08] 2025-06-04 06:47:08,829 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:47:08] 2025-06-04 06:47:08,831 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:47:08]  *** Error codes and diagnostics ***
[2025-06-04 02:47:08]     "exeErrorCode": 0,
[2025-06-04 02:47:08]     "exeErrorDiag": "",
[2025-06-04 02:47:08]     "pilotErrorCode": 0,
[2025-06-04 02:47:08]     "pilotErrorDiag": "",
[2025-06-04 02:47:08]  *** Listing of results directory ***
[2025-06-04 02:47:08] total 395092
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 19:58 pilot3.tar.gz
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 20:43 queuedata.json
[2025-06-04 02:47:08] -rwx------. 1 boincer umatlas     37140 Jun  3 20:45 runpilot2-wrapper.sh
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas       100 Jun  4 01:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:47:08] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 01:57 run_atlas
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas       105 Jun  4 01:57 job.xml
[2025-06-04 02:47:08] -rw-r--r--. 2 boincer umatlas 215774278 Jun  4 01:57 EVNT.45006593._001975.pool.root.1
[2025-06-04 02:47:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 01:57 start_atlas.sh
[2025-06-04 02:47:08] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 01:57 shared
[2025-06-04 02:47:08] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 01:57 input.tar.gz
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas         0 Jun  4 01:57 boinc_lockfile
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 01:58 pandaJob.out
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas    986745 Jun  4 01:58 agis_schedconf.cvmfs.json
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas   1603667 Jun  4 01:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:47:08] drwx------. 4 boincer umatlas      4096 Jun  4 01:58 pilot3
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas      7159 Jun  4 02:40 init_data.xml
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas        95 Jun  4 02:46 pilot_heartbeat.json
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas 183753136 Jun  4 02:46 HITS.45006595._049249.pool.root.1
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas       529 Jun  4 02:46 boinc_task_state.xml
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas      1031 Jun  4 02:46 memory_monitor_summary.json
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas    296174 Jun  4 02:46 log.45006595._049249.job.log.tgz.1
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas      7681 Jun  4 02:46 heartbeat.json
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 02:47 boinc_mmap_file
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas        27 Jun  4 02:47 wrapper_checkpoint.txt
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas      4426 Jun  4 02:47 pilotlog.txt
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas    308473 Jun  4 02:47 log.45006595._049249.job.log.1
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas       357 Jun  4 02:47 output.list
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas       620 Jun  4 02:47 runtime_log
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas    624640 Jun  4 02:47 result.tar.gz
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas      8649 Jun  4 02:47 runtime_log.err
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas       649 Jun  4 02:47 dzmNDmNRrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYOaKDmJQjO2m.diag
[2025-06-04 02:47:08] -rw-r--r--. 1 boincer umatlas     21386 Jun  4 02:47 stderr.txt
[2025-06-04 02:47:08] HITS file was successfully produced:
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas 183753136 Jun  4 02:46 shared/HITS.pool.root.1
[2025-06-04 02:47:08]  *** Contents of shared directory: ***
[2025-06-04 02:47:08] total 391300
[2025-06-04 02:47:08] -rw-r--r--. 2 boincer umatlas 215774278 Jun  4 01:57 ATLAS.root_0
[2025-06-04 02:47:08] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 01:57 start_atlas.sh
[2025-06-04 02:47:08] -rw-r--r--. 2 boincer umatlas    508887 Jun  4 01:57 input.tar.gz
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas 183753136 Jun  4 02:46 HITS.pool.root.1
[2025-06-04 02:47:08] -rw-------. 1 boincer umatlas    624640 Jun  4 02:47 result.tar.gz
02:47:10 (2280143): run_atlas exited; CPU time 18492.880109
02:47:10 (2280143): called boinc_finish(0)

</stderr_txt>
]]>

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