Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:18:29 (902670): wrapper (7.7.26015): starting
17:18:29 (902670): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 17:18:29] Arguments: --nthreads 4
[2025-06-05 17:18:29] Threads: 4
[2025-06-05 17:18:29] Checking for CVMFS
[2025-06-05 17:18:29] No cvmfs_config command found, will try listing directly
[2025-06-05 17:18:29] CVMFS is ok
[2025-06-05 17:18:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 17:18:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 17:18:29] Further information can be found at the LHC@home message board.
[2025-06-05 17:18:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 17:18:29] Checking for apptainer binary...
[2025-06-05 17:18:29] which: no apptainer in ((null))
[2025-06-05 17:18:29] apptainer is not installed, using version from CVMFS
[2025-06-05 17:18:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 17:18:29] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-05 17:18:29] apptainer works
[2025-06-05 17:18:29] Set ATHENA_PROC_NUMBER=4
[2025-06-05 17:18:29] Set ATHENA_CORE_NUMBER=4
[2025-06-05 17:18:29] Starting ATLAS job with PandaID=6678244449
[2025-06-05 17:18:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:42:26 (13735): wrapper (7.7.26015): starting
18:42:26 (13735): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 18:42:26] Arguments: --nthreads 4
[2025-06-05 18:42:26] Threads: 4
[2025-06-05 18:42:26] This job has been restarted, cleaning up previous attempt
[2025-06-05 18:42:26] Checking for CVMFS
[2025-06-05 18:42:26] No cvmfs_config command found, will try listing directly
[2025-06-05 18:42:26] CVMFS is ok
[2025-06-05 18:42:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 18:42:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 18:42:26] Further information can be found at the LHC@home message board.
[2025-06-05 18:42:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 18:42:26] Checking for apptainer binary...
[2025-06-05 18:42:26] which: no apptainer in ((null))
[2025-06-05 18:42:26] apptainer is not installed, using version from CVMFS
[2025-06-05 18:42:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 18:42:27] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot120/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-05 18:42:27] apptainer works
[2025-06-05 18:42:27] Set ATHENA_PROC_NUMBER=4
[2025-06-05 18:42:27] Set ATHENA_CORE_NUMBER=4
[2025-06-05 18:42:27] Starting ATLAS job with PandaID=6678244449
[2025-06-05 18:42:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot120/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:00:19]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:00:19] 2025-06-05 18:57:24,939 | INFO     | using path: /scratch/boinc/var/slot120/slots/0/PanDA_Pilot-6678244449/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 21:00:19] 2025-06-05 18:57:24,940 | INFO     | extracted standard info from prmon json
[2025-06-05 21:00:19] 2025-06-05 18:57:24,940 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 21:00:19] 2025-06-05 18:57:24,940 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 21:00:19] 2025-06-05 18:57:24,941 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 21:00:19] 2025-06-05 18:57:24,941 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 21:00:19] 2025-06-05 18:57:24,944 | INFO     | fitting pss+swap vs Time
[2025-06-05 21:00:19] 2025-06-05 18:57:24,944 | INFO     | sum of square deviations: 713140813.0
[2025-06-05 21:00:19] 2025-06-05 18:57:24,945 | INFO     | sum of deviations: 19508647412.0
[2025-06-05 21:00:19] 2025-06-05 18:57:24,945 | INFO     | mean x: 1749145791.5
[2025-06-05 21:00:19] 2025-06-05 18:57:24,945 | INFO     | mean y: 2286025.106060606
[2025-06-05 21:00:19] 2025-06-05 18:57:24,946 | INFO     | -- intersect: -47847266120.15472
[2025-06-05 21:00:19] 2025-06-05 18:57:24,946 | INFO     | intersect: -47847266120.15472
[2025-06-05 21:00:19] 2025-06-05 18:57:24,946 | INFO     | chi2: 1.5363296933572177
[2025-06-05 21:00:19] 2025-06-05 18:57:24,946 | INFO     | sum of square deviations: 635130048.0
[2025-06-05 21:00:19] 2025-06-05 18:57:24,947 | INFO     | sum of deviations: 18686297994.000004
[2025-06-05 21:00:19] 2025-06-05 18:57:24,947 | INFO     | mean x: 1749145639.0
[2025-06-05 21:00:19] 2025-06-05 18:57:24,947 | INFO     | mean y: 2284416.716535433
[2025-06-05 21:00:19] 2025-06-05 18:57:24,947 | INFO     | -- intersect: -51459706317.59612
[2025-06-05 21:00:19] 2025-06-05 18:57:24,947 | INFO     | intersect: -51459706317.59612
[2025-06-05 21:00:19] 2025-06-05 18:57:24,948 | INFO     | chi2: 1.538169012192012
[2025-06-05 21:00:19] 2025-06-05 18:57:24,948 | INFO     | current chi2=1.538169012192012 (change=-0.11972162243215859 %)
[2025-06-05 21:00:19] 2025-06-05 18:57:24,948 | INFO     | right removable region: 126
[2025-06-05 21:00:19] 2025-06-05 18:57:24,948 | INFO     | sum of square deviations: 635130048.0
[2025-06-05 21:00:19] 2025-06-05 18:57:24,949 | INFO     | sum of deviations: 530836213.00000006
[2025-06-05 21:00:19] 2025-06-05 18:57:24,949 | INFO     | mean x: 1749145944.0
[2025-06-05 21:00:19] 2025-06-05 18:57:24,949 | INFO     | mean y: 2322482.3937007873
[2025-06-05 21:00:19] 2025-06-05 18:57:24,949 | INFO     | -- intersect: -1459598602.6204822
[2025-06-05 21:00:19] 2025-06-05 18:57:24,949 | INFO     | intersect: -1459598602.6204822
[2025-06-05 21:00:19] 2025-06-05 18:57:24,949 | INFO     | chi2: 0.001585431545549685
[2025-06-05 21:00:19] 2025-06-05 18:57:24,949 | INFO     | current chi2=0.001585431545549685 (change=99.89680395084436 %)
[2025-06-05 21:00:19] 2025-06-05 18:57:24,950 | INFO     | sum of square deviations: 563026370.5
[2025-06-05 21:00:19] 2025-06-05 18:57:24,950 | INFO     | sum of deviations: 35510113.00000013
[2025-06-05 21:00:19] 2025-06-05 18:57:24,950 | INFO     | mean x: 1749146096.5
[2025-06-05 21:00:19] 2025-06-05 18:57:24,950 | INFO     | mean y: 2323519.180327869
[2025-06-05 21:00:19] 2025-06-05 18:57:24,951 | INFO     | -- intersect: -107995248.81106254
[2025-06-05 21:00:19] 2025-06-05 18:57:24,951 | INFO     | intersect: -107995248.81106254
[2025-06-05 21:00:19] 2025-06-05 18:57:24,951 | INFO     | chi2: 0.0008830609410288916
[2025-06-05 21:00:19] 2025-06-05 18:57:24,951 | INFO     | current chi2=0.0008830609410288916 (change=44.30154089543327 %)
[2025-06-05 21:00:19] 2025-06-05 18:57:24,951 | INFO     | sum of square deviations: 496597218.0
[2025-06-05 21:00:19] 2025-06-05 18:57:24,952 | INFO     | sum of deviations: 38358874.000000015
[2025-06-05 21:00:19] 2025-06-05 18:57:24,952 | INFO     | mean x: 1749146249.0
[2025-06-05 21:00:19] 2025-06-05 18:57:24,952 | INFO     | mean y: 2323506.829059829
[2025-06-05 21:00:19] 2025-06-05 18:57:24,952 | INFO     | -- intersect: -132786554.48619236
[2025-06-05 21:00:19] 2025-06-05 18:57:24,952 | INFO     | intersect: -132786554.48619236
[2025-06-05 21:00:19] 2025-06-05 18:57:24,952 | INFO     | chi2: 0.0008447151656235613
[2025-06-05 21:00:19] 2025-06-05 18:57:24,953 | INFO     | current chi2=0.0008447151656235613 (change=4.342370228792138 %)
[2025-06-05 21:00:19] 2025-06-05 18:57:24,953 | INFO     | left removable region: 30
[2025-06-05 21:00:19] 2025-06-05 18:57:24,953 | INFO     | sum of square deviations: 274312120.0
[2025-06-05 21:00:19] 2025-06-05 18:57:24,953 | INFO     | sum of deviations: 492443788.9999999
[2025-06-05 21:00:19] 2025-06-05 18:57:24,953 | INFO     | mean x: 1749146523.5
[2025-06-05 21:00:19] 2025-06-05 18:57:24,953 | INFO     | mean y: 2321695.2291666665
[2025-06-05 21:00:19] 2025-06-05 18:57:24,954 | INFO     | -- intersect: -3137737670.5346117
[2025-06-05 21:00:19] 2025-06-05 18:57:24,954 | INFO     | intersect: -3137737670.5346117
[2025-06-05 21:00:19] 2025-06-05 18:57:24,954 | INFO     | chi2: 0.00031732129907056786
[2025-06-05 21:00:19] 2025-06-05 18:57:24,954 | INFO     | -- intersect: -3137737670.5346117
[2025-06-05 21:00:19] 2025-06-05 18:57:24,954 | INFO     | current memory leak: 1.80 B/s (using 96 data points, chi2=0.00)
[2025-06-05 21:00:19] 2025-06-05 18:57:24,955 | INFO     | ..............................
[2025-06-05 21:00:19] 2025-06-05 18:57:24,955 | INFO     | . Timing measurements:
[2025-06-05 21:00:19] 2025-06-05 18:57:24,955 | INFO     | . get job = 0 s
[2025-06-05 21:00:19] 2025-06-05 18:57:24,955 | INFO     | . initial setup = 1 s
[2025-06-05 21:00:19] 2025-06-05 18:57:24,955 | INFO     | . payload setup = 8 s
[2025-06-05 21:00:19] 2025-06-05 18:57:24,955 | INFO     | . stage-in = 0 s
[2025-06-05 21:00:19] 2025-06-05 18:57:24,955 | INFO     | . payload execution = 8044 s
[2025-06-05 21:00:19] 2025-06-05 18:57:24,955 | INFO     | . stage-out = 0 s
[2025-06-05 21:00:19] 2025-06-05 18:57:24,955 | INFO     | . log creation = 0 s
[2025-06-05 21:00:19] 2025-06-05 18:57:24,955 | INFO     | ..............................
[2025-06-05 21:00:19] 2025-06-05 18:57:25,050 | INFO     | 
[2025-06-05 21:00:19] 2025-06-05 18:57:25,050 | INFO     | job summary report
[2025-06-05 21:00:19] 2025-06-05 18:57:25,050 | INFO     | --------------------------------------------------
[2025-06-05 21:00:19] 2025-06-05 18:57:25,050 | INFO     | PanDA job id: 6678244449
[2025-06-05 21:00:19] 2025-06-05 18:57:25,050 | INFO     | task id: 45006595
[2025-06-05 21:00:19] 2025-06-05 18:57:25,050 | INFO     | errors: (none)
[2025-06-05 21:00:19] 2025-06-05 18:57:25,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:00:19] 2025-06-05 18:57:25,050 | INFO     | pilot state: finished 
[2025-06-05 21:00:19] 2025-06-05 18:57:25,050 | INFO     | transexitcode: 0
[2025-06-05 21:00:19] 2025-06-05 18:57:25,050 | INFO     | exeerrorcode: 0
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | exeerrordiag: 
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | exitcode: 0
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | exitmsg: OK
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | cpuconsumptiontime: 30538 s
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | nevents: 400
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | neventsw: 0
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | pid: 306080
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | pgrp: 306080
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | corecount: 4
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | event service: False
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | sizes: {0: 2397354, 5: 2397560, 11: 2397616, 8057: 2425530, 8058: 2434495, 8061: 2434551, 8069: 2434849}
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | --------------------------------------------------
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | 
[2025-06-05 21:00:19] 2025-06-05 18:57:25,051 | INFO     | executing command: ls -lF /scratch/boinc/var/slot120/slots/0
[2025-06-05 21:00:19] 2025-06-05 18:57:25,078 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,078 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,078 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,078 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,079 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,079 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,079 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,079 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,079 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,079 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,079 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,079 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,080 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,080 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:00:19] 2025-06-05 18:57:25,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,080 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:00:19] 2025-06-05 18:57:25,080 | INFO     | job 6678244449 has completed (purged errors)
[2025-06-05 21:00:19] 2025-06-05 18:57:25,080 | INFO     | overall cleanup function is called
[2025-06-05 21:00:19] 2025-06-05 18:57:26,088 | INFO     | --- collectZombieJob: --- 10, [306080]
[2025-06-05 21:00:19] 2025-06-05 18:57:26,088 | INFO     | zombie collector waiting for pid 306080
[2025-06-05 21:00:19] 2025-06-05 18:57:26,088 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:00:19] 2025-06-05 18:57:26,088 | INFO     | collected zombie processes
[2025-06-05 21:00:19] 2025-06-05 18:57:26,088 | INFO     | will attempt to kill all subprocesses of pid=306080
[2025-06-05 21:00:19] 2025-06-05 18:57:26,740 | INFO     | process IDs to be killed: [306080] (in reverse order)
[2025-06-05 21:00:19] 2025-06-05 18:57:26,999 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:00:19] 2025-06-05 18:57:27,000 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:00:19] 2025-06-05 18:57:27,028 | INFO     | did not find any defunct processes belonging to 306080
[2025-06-05 21:00:19] 2025-06-05 18:57:27,056 | INFO     | did not find any defunct processes belonging to 306080
[2025-06-05 21:00:19] 2025-06-05 18:57:27,056 | INFO     | ready for new job
[2025-06-05 21:00:19] 2025-06-05 18:57:27,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:00:19] 2025-06-05 18:57:27,058 | INFO     | **************************************
[2025-06-05 21:00:19] 2025-06-05 18:57:27,058 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:00:19] 2025-06-05 18:57:27,058 | INFO     | **************************************
[2025-06-05 21:00:19] 2025-06-05 18:57:27,058 | INFO     | 
[2025-06-05 21:00:19] 2025-06-05 18:57:27,066 | INFO     | architecture information:
[2025-06-05 21:00:19] 2025-06-05 18:57:27,066 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:00:19] 2025-06-05 18:57:27,085 | INFO     | cat /etc/os-release:
[2025-06-05 21:00:19] NAME="CentOS Linux"
[2025-06-05 21:00:19] VERSION="7 (Core)"
[2025-06-05 21:00:19] ID="centos"
[2025-06-05 21:00:19] ID_LIKE="rhel fedora"
[2025-06-05 21:00:19] VERSION_ID="7"
[2025-06-05 21:00:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:00:19] ANSI_COLOR="0;31"
[2025-06-05 21:00:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:00:19] HOME_URL="https://www.centos.org/"
[2025-06-05 21:00:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:00:19] 
[2025-06-05 21:00:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:00:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:00:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:00:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:00:19] 
[2025-06-05 21:00:19] 2025-06-05 18:57:27,085 | INFO     | **************************************
[2025-06-05 21:00:19] 2025-06-05 18:57:27,587 | INFO     | executing command: df -mP /scratch/boinc/var/slot120/slots/0
[2025-06-05 21:00:19] 2025-06-05 18:57:27,611 | INFO     | sufficient remaining disk space (3324587802624 B)
[2025-06-05 21:00:19] 2025-06-05 18:57:27,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:00:19] 2025-06-05 18:57:27,611 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:00:19] 2025-06-05 18:57:27,612 | INFO     | update_server=False
[2025-06-05 21:00:19] 2025-06-05 18:57:27,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:00:19] 2025-06-05 18:57:27,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:00:19] 2025-06-05 18:57:27,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:00:19] 2025-06-05 18:57:27,613 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 21:00:19] 2025-06-05 18:57:27,613 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:00:19] 2025-06-05 18:57:27,613 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:00:19] 2025-06-05 18:57:27,613 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:00:19] 2025-06-05 18:57:27,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:00:19] 2025-06-05 18:57:27,614 | INFO     | aborting loop
[2025-06-05 21:00:19] 2025-06-05 18:57:27,831 | INFO     | all data control threads have been joined
[2025-06-05 21:00:19] 2025-06-05 18:57:27,933 | INFO     | all job control threads have been joined
[2025-06-05 21:00:19] 2025-06-05 18:57:28,368 | INFO     | all payload control threads have been joined
[2025-06-05 21:00:19] 2025-06-05 18:57:28,613 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:28,618 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:28,634 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:28,762 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:28,837 | INFO     | [data] control thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:28,851 | INFO     | [job] validate thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:28,938 | INFO     | [job] control thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:28,958 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:29,109 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:29,244 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:29,373 | INFO     | [payload] control thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:29,384 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:29,614 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:29,735 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:30,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:00:19] 2025-06-05 18:57:31,065 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:31,619 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:00:19] 2025-06-05 18:57:32,433 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22940957931328)>', '<ExcThread(monitor, started 22940724725504)>']
[2025-06-05 21:00:19] 2025-06-05 18:57:32,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:00:19] 2025-06-05 18:57:32,638 | INFO     | [monitor] control thread has ended
[2025-06-05 21:00:19] 2025-06-05 18:57:37,458 | INFO     | all workflow threads have been joined
[2025-06-05 21:00:19] 2025-06-05 18:57:37,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:00:19] 2025-06-05 18:57:37,458 | INFO     | traces error code: 0
[2025-06-05 21:00:19] 2025-06-05 18:57:37,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:00:19] 2025-06-05 18:57:37,587 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:00:19] 2025-06-05 18:57:37,590 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:00:19] 2025-06-05 18:57:37,592 [wrapper] pilotpid: 117099
[2025-06-05 21:00:19] 2025-06-05 18:57:37,595 [wrapper] Pilot exit status: 0
[2025-06-05 21:00:19] 2025-06-05 18:57:37,607 [wrapper] pandaids: 6678244449 6678244449
[2025-06-05 21:00:19] 2025-06-05 18:57:37,719 [wrapper] cleanup supervisor_pilot  989536 117105
[2025-06-05 21:00:19] 2025-06-05 18:57:37,723 [wrapper] Test setup, not cleaning
[2025-06-05 21:00:19] 2025-06-05 18:57:37,726 [wrapper] apfmon messages muted
[2025-06-05 21:00:19] 2025-06-05 18:57:37,729 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:00:19] 2025-06-05 18:57:37,732 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:00:19]  *** Error codes and diagnostics ***
[2025-06-05 21:00:19]     "exeErrorCode": 0,
[2025-06-05 21:00:19]     "exeErrorDiag": "",
[2025-06-05 21:00:19]     "pilotErrorCode": 0,
[2025-06-05 21:00:19]     "pilotErrorDiag": "",
[2025-06-05 21:00:19]  *** Listing of results directory ***
[2025-06-05 21:00:19] total 612056
[2025-06-05 21:00:19] drwx------ 4 boinc boinc      4096 Apr  3 10:00 pilot3
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-05 21:00:19] -rwx------ 1 boinc boinc     37140 Jun  4 02:55 runpilot2-wrapper.sh
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc      5111 Jun  4 02:55 queuedata.json
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc       100 Jun  5 17:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:00:19] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 17:18 run_atlas
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc       105 Jun  5 17:18 job.xml
[2025-06-05 21:00:19] -rw-r--r-- 3 boinc boinc 217054459 Jun  5 17:18 EVNT.45006593._001983.pool.root.1
[2025-06-05 21:00:19] -rw-r--r-- 3 boinc boinc 217054459 Jun  5 17:18 ATLAS.root_0
[2025-06-05 21:00:19] -rw-r--r-- 2 boinc boinc     15093 Jun  5 17:18 start_atlas.sh
[2025-06-05 21:00:19] drwxrwx--x 2 boinc boinc      4096 Jun  5 17:18 shared
[2025-06-05 21:00:19] -rw-r--r-- 2 boinc boinc    508879 Jun  5 17:18 input.tar.gz
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc         0 Jun  5 17:18 boinc_lockfile
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc      2525 Jun  5 18:42 pandaJob.out
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc      6693 Jun  5 18:42 init_data.xml
[2025-06-05 21:00:19] -rw------- 1 boinc boinc    983229 Jun  5 18:42 agis_schedconf.cvmfs.json
[2025-06-05 21:00:19] -rw------- 1 boinc boinc        96 Jun  5 20:56 pilot_heartbeat.json
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc       530 Jun  5 20:56 boinc_task_state.xml
[2025-06-05 21:00:19] -rw------- 1 boinc boinc 186740920 Jun  5 20:56 HITS.45006595._049454.pool.root.1
[2025-06-05 21:00:19] -rw------- 1 boinc boinc      1041 Jun  5 20:57 memory_monitor_summary.json
[2025-06-05 21:00:19] -rw------- 1 boinc boinc   1598969 Jun  5 20:57 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:00:19] -rw------- 1 boinc boinc    270169 Jun  5 20:57 log.45006595._049454.job.log.tgz.1
[2025-06-05 21:00:19] -rw------- 1 boinc boinc      7722 Jun  5 20:57 heartbeat.json
[2025-06-05 21:00:19] -rw------- 1 boinc boinc      4488 Jun  5 20:57 pilotlog.txt
[2025-06-05 21:00:19] -rw------- 1 boinc boinc    758410 Jun  5 20:57 log.45006595._049454.job.log.1
[2025-06-05 21:00:19] -rw------- 1 boinc boinc       357 Jun  5 20:57 output.list
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc       620 Jun  5 20:57 runtime_log
[2025-06-05 21:00:19] -rw------- 1 boinc boinc   1044480 Jun  5 20:57 result.tar.gz
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc      9117 Jun  5 20:57 runtime_log.err
[2025-06-05 21:00:19] -rw------- 1 boinc boinc       792 Jun  5 20:57 mJ9NDmTarg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmphmKDmCv0ihm.diag
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc        27 Jun  5 21:00 wrapper_checkpoint.txt
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc      8192 Jun  5 21:00 boinc_mmap_file
[2025-06-05 21:00:19] -rw-r--r-- 1 boinc boinc     22572 Jun  5 21:00 stderr.txt
[2025-06-05 21:00:19] HITS file was successfully produced:
[2025-06-05 21:00:19] -rw------- 1 boinc boinc 186740920 Jun  5 20:56 shared/HITS.pool.root.1
[2025-06-05 21:00:19]  *** Contents of shared directory: ***
[2025-06-05 21:00:19] total 395880
[2025-06-05 21:00:19] -rw-r--r-- 3 boinc boinc 217054459 Jun  5 17:18 ATLAS.root_0
[2025-06-05 21:00:19] -rw-r--r-- 2 boinc boinc     15093 Jun  5 17:18 start_atlas.sh
[2025-06-05 21:00:19] -rw-r--r-- 2 boinc boinc    508879 Jun  5 17:18 input.tar.gz
[2025-06-05 21:00:19] -rw------- 1 boinc boinc 186740920 Jun  5 20:56 HITS.pool.root.1
[2025-06-05 21:00:19] -rw------- 1 boinc boinc   1044480 Jun  5 20:57 result.tar.gz
21:00:21 (13735): run_atlas exited; CPU time 30948.031089
21:00:21 (13735): called boinc_finish(0)

</stderr_txt>
]]>

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