Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:41:07 (3725893): wrapper (7.7.26015): starting
01:41:07 (3725893): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 01:41:07] Arguments: --nthreads 10
[2025-06-04 01:41:07] Threads: 10
[2025-06-04 01:41:07] Checking for CVMFS
[2025-06-04 01:41:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:41:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:41:07] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:41:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:41:07] 2.12.6.0 9377 930 130164 146769 3 278 24343648 32935936 9468 16776704 0 5373070 99.725 3149510 34729 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 01:41:07] CVMFS is ok
[2025-06-04 01:41:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:41:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:41:07] Further information can be found at the LHC@home message board.
[2025-06-04 01:41:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:41:07] Checking for apptainer binary...
[2025-06-04 01:41:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:41:07] Running /usr/bin/apptainer --version
[2025-06-04 01:41:07] apptainer version 1.4.1-1.el9
[2025-06-04 01:41:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:41:08] c-8-15.aglt2.org
[2025-06-04 01:41:08] apptainer works
[2025-06-04 01:41:08] Set ATHENA_PROC_NUMBER=10
[2025-06-04 01:41:08] Set ATHENA_CORE_NUMBER=10
[2025-06-04 01:41:08] Starting ATLAS job with PandaID=6678151066
[2025-06-04 01:41:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:58:13]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:58:13]  is_altstaged=None
[2025-06-04 02:58:13]  is_tar=False
[2025-06-04 02:58:13]  lfn=log.45006595._046967.job.log.tgz.1
[2025-06-04 02:58:13]  mtime=0
[2025-06-04 02:58:13]  protocol_id=None
[2025-06-04 02:58:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 02:58:13]  replicas=None
[2025-06-04 02:58:13]  scope=mc23_13p6TeV
[2025-06-04 02:58:13]  status=None
[2025-06-04 02:58:13]  status_code=0
[2025-06-04 02:58:13]  storage_token=
[2025-06-04 02:58:13]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678151066/log.45006595._046967.job.log.tgz.1
[2025-06-04 02:58:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/b5/log.45006595._046967.job.log.tgz.1
[2025-06-04 02:58:13]  workdir=None
[2025-06-04 02:58:13] ]
[2025-06-04 02:58:13] 2025-06-04 06:57:45,660 | INFO     | transferring file log.45006595._046967.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678151066/log.45006595._046967.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:58:13] 2025-06-04 06:57:45,661 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678151066/log.45006595._046967.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._046967.job
[2025-06-04 02:58:13] 2025-06-04 06:57:45,680 | INFO     | adding to output.list: log.45006595._046967.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1a/b5/log.45006595._046967.job.log.tg
[2025-06-04 02:58:13] 2025-06-04 06:57:45,681 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:58:13] 2025-06-04 06:57:45,681 | INFO     | summary of transferred files:
[2025-06-04 02:58:13] 2025-06-04 06:57:45,681 | INFO     |  -- lfn=log.45006595._046967.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:58:13] 2025-06-04 06:57:45,681 | INFO     | stage-out finished correctly
[2025-06-04 02:58:13] 2025-06-04 06:57:48,318 | WARNING  | process 3736861 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 02:58:13] 2025-06-04 06:57:48,318 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678151066/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:58:13] 2025-06-04 06:57:48,666 | INFO     | number of running child processes to parent process 3736861: 1
[2025-06-04 02:58:13] 2025-06-04 06:57:48,666 | INFO     | maximum number of monitored processes: 6
[2025-06-04 02:58:13] 2025-06-04 06:57:49,252 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:58:13] 2025-06-04 06:57:51,038 | INFO     | job 6678151066 has state=finished
[2025-06-04 02:58:13] 2025-06-04 06:57:51,038 | INFO     | preparing for final server update for job 6678151066 in state='finished'
[2025-06-04 02:58:13] 2025-06-04 06:57:51,039 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:58:13] 2025-06-04 06:57:51,039 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:58:13] 2025-06-04 06:57:51,039 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:58:13] 2025-06-04 06:57:51,039 | INFO     | job 6678151066 has finished - writing final server update
[2025-06-04 02:58:13] 2025-06-04 06:57:51,040 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:58:13] 2025-06-04 06:57:51,054 | INFO     | executing command: lscpu
[2025-06-04 02:58:13] 2025-06-04 06:57:51,101 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:58:13] 2025-06-04 06:57:51,170 | INFO     | monitor loop #339: job 0:6678151066 is in state 'finished'
[2025-06-04 02:58:13] 2025-06-04 06:57:51,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:58:13] 2025-06-04 06:57:53,672 | INFO     | monitor loop #340: job 0:6678151066 is in state 'finished'
[2025-06-04 02:58:13] 2025-06-04 06:57:53,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:58:13] 2025-06-04 06:57:54,912 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 02:58:13] 2025-06-04 06:57:54,913 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678151066/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:58:13] 2025-06-04 06:57:54,914 | INFO     | extracted standard info from prmon json
[2025-06-04 02:58:13] 2025-06-04 06:57:54,914 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:58:13] 2025-06-04 06:57:54,914 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:58:13] 2025-06-04 06:57:54,914 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:58:13] 2025-06-04 06:57:54,915 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:58:13] 2025-06-04 06:57:54,917 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:58:13] 2025-06-04 06:57:54,918 | INFO     | sum of square deviations: 97479037.0
[2025-06-04 02:58:13] 2025-06-04 06:57:54,918 | INFO     | sum of deviations: 109875030.0
[2025-06-04 02:58:13] 2025-06-04 06:57:54,918 | INFO     | mean x: 1749018049.5
[2025-06-04 02:58:13] 2025-06-04 06:57:54,918 | INFO     | mean y: 2296014.0
[2025-06-04 02:58:13] 2025-06-04 06:57:54,918 | INFO     | -- intersect: -1969137194.3456464
[2025-06-04 02:58:13] 2025-06-04 06:57:54,919 | INFO     | intersect: -1969137194.3456464
[2025-06-04 02:58:13] 2025-06-04 06:57:54,919 | INFO     | chi2: 0.9010674659949592
[2025-06-04 02:58:13] 2025-06-04 06:57:54,919 | INFO     | -- intersect: -1969137194.3456464
[2025-06-04 02:58:13] 2025-06-04 06:57:54,919 | INFO     | current memory leak: 1.13 B/s (using 68 data points, chi2=0.90)
[2025-06-04 02:58:13] 2025-06-04 06:57:54,920 | INFO     | ..............................
[2025-06-04 02:58:13] 2025-06-04 06:57:54,920 | INFO     | . Timing measurements:
[2025-06-04 02:58:13] 2025-06-04 06:57:54,920 | INFO     | . get job = 0 s
[2025-06-04 02:58:13] 2025-06-04 06:57:54,920 | INFO     | . initial setup = 2 s
[2025-06-04 02:58:13] 2025-06-04 06:57:54,920 | INFO     | . payload setup = 5 s
[2025-06-04 02:58:13] 2025-06-04 06:57:54,920 | INFO     | . stage-in = 0 s
[2025-06-04 02:58:13] 2025-06-04 06:57:54,921 | INFO     | . payload execution = 4563 s
[2025-06-04 02:58:13] 2025-06-04 06:57:54,921 | INFO     | . stage-out = 1 s
[2025-06-04 02:58:13] 2025-06-04 06:57:54,921 | INFO     | . log creation = 0 s
[2025-06-04 02:58:13] 2025-06-04 06:57:54,921 | INFO     | ..............................
[2025-06-04 02:58:13] 2025-06-04 06:57:55,034 | INFO     | 
[2025-06-04 02:58:13] 2025-06-04 06:57:55,035 | INFO     | job summary report
[2025-06-04 02:58:13] 2025-06-04 06:57:55,035 | INFO     | --------------------------------------------------
[2025-06-04 02:58:13] 2025-06-04 06:57:55,035 | INFO     | PanDA job id: 6678151066
[2025-06-04 02:58:13] 2025-06-04 06:57:55,035 | INFO     | task id: 45006595
[2025-06-04 02:58:13] 2025-06-04 06:57:55,035 | INFO     | errors: (none)
[2025-06-04 02:58:13] 2025-06-04 06:57:55,035 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:58:13] 2025-06-04 06:57:55,036 | INFO     | pilot state: finished 
[2025-06-04 02:58:13] 2025-06-04 06:57:55,036 | INFO     | transexitcode: 0
[2025-06-04 02:58:13] 2025-06-04 06:57:55,036 | INFO     | exeerrorcode: 0
[2025-06-04 02:58:13] 2025-06-04 06:57:55,036 | INFO     | exeerrordiag: 
[2025-06-04 02:58:13] 2025-06-04 06:57:55,036 | INFO     | exitcode: 0
[2025-06-04 02:58:13] 2025-06-04 06:57:55,036 | INFO     | exitmsg: OK
[2025-06-04 02:58:13] 2025-06-04 06:57:55,036 | INFO     | cpuconsumptiontime: 38482 s
[2025-06-04 02:58:13] 2025-06-04 06:57:55,036 | INFO     | nevents: 400
[2025-06-04 02:58:13] 2025-06-04 06:57:55,036 | INFO     | neventsw: 0
[2025-06-04 02:58:13] 2025-06-04 06:57:55,036 | INFO     | pid: 3736861
[2025-06-04 02:58:13] 2025-06-04 06:57:55,036 | INFO     | pgrp: 3736861
[2025-06-04 02:58:13] 2025-06-04 06:57:55,037 | INFO     | corecount: 10
[2025-06-04 02:58:13] 2025-06-04 06:57:55,037 | INFO     | event service: False
[2025-06-04 02:58:13] 2025-06-04 06:57:55,037 | INFO     | sizes: {0: 2405184, 4: 2405390, 11: 2405418, 4572: 2431506, 4573: 2431505, 4575: 2440502, 4578: 2440686, 4584: 2440856}
[2025-06-04 02:58:13] 2025-06-04 06:57:55,037 | INFO     | --------------------------------------------------
[2025-06-04 02:58:13] 2025-06-04 06:57:55,037 | INFO     | 
[2025-06-04 02:58:13] 2025-06-04 06:57:55,037 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:58:13] 2025-06-04 06:57:55,055 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,056 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,056 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,056 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,056 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,056 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,056 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,056 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,057 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,057 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,057 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,057 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,057 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,057 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,057 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,057 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:58:13] 2025-06-04 06:57:55,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,058 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:58:13] 2025-06-04 06:57:55,058 | INFO     | job 6678151066 has completed (purged errors)
[2025-06-04 02:58:13] 2025-06-04 06:57:55,058 | INFO     | overall cleanup function is called
[2025-06-04 02:58:13] 2025-06-04 06:57:56,065 | INFO     | --- collectZombieJob: --- 10, [3736861]
[2025-06-04 02:58:13] 2025-06-04 06:57:56,066 | INFO     | zombie collector waiting for pid 3736861
[2025-06-04 02:58:13] 2025-06-04 06:57:56,066 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:58:13] 2025-06-04 06:57:56,066 | INFO     | collected zombie processes
[2025-06-04 02:58:13] 2025-06-04 06:57:56,066 | INFO     | will attempt to kill all subprocesses of pid=3736861
[2025-06-04 02:58:13] 2025-06-04 06:57:56,280 | INFO     | process IDs to be killed: [3736861] (in reverse order)
[2025-06-04 02:58:13] 2025-06-04 06:57:56,343 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:58:13] 2025-06-04 06:57:56,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:58:13] 2025-06-04 06:57:56,351 | INFO     | did not find any defunct processes belonging to 3736861
[2025-06-04 02:58:13] 2025-06-04 06:57:56,360 | INFO     | did not find any defunct processes belonging to 3736861
[2025-06-04 02:58:13] 2025-06-04 06:57:56,360 | INFO     | ready for new job
[2025-06-04 02:58:13] 2025-06-04 06:57:56,361 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:58:13] 2025-06-04 06:57:56,363 | INFO     | **************************************
[2025-06-04 02:58:13] 2025-06-04 06:57:56,363 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:58:13] 2025-06-04 06:57:56,363 | INFO     | **************************************
[2025-06-04 02:58:13] 2025-06-04 06:57:56,363 | INFO     | 
[2025-06-04 02:58:13] 2025-06-04 06:57:56,377 | INFO     | architecture information:
[2025-06-04 02:58:13] 2025-06-04 06:57:56,378 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:58:13] 2025-06-04 06:57:56,392 | INFO     | cat /etc/os-release:
[2025-06-04 02:58:13] NAME="CentOS Linux"
[2025-06-04 02:58:13] VERSION="7 (Core)"
[2025-06-04 02:58:13] ID="centos"
[2025-06-04 02:58:13] ID_LIKE="rhel fedora"
[2025-06-04 02:58:13] VERSION_ID="7"
[2025-06-04 02:58:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:58:13] ANSI_COLOR="0;31"
[2025-06-04 02:58:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:58:13] HOME_URL="https://www.centos.org/"
[2025-06-04 02:58:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:58:13] 
[2025-06-04 02:58:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:58:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:58:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:58:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:58:13] 
[2025-06-04 02:58:13] 2025-06-04 06:57:56,393 | INFO     | **************************************
[2025-06-04 02:58:13] 2025-06-04 06:57:56,896 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:58:13] 2025-06-04 06:57:56,912 | INFO     | sufficient remaining disk space (76599525376 B)
[2025-06-04 02:58:13] 2025-06-04 06:57:56,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:58:13] 2025-06-04 06:57:56,913 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:58:13] 2025-06-04 06:57:56,913 | INFO     | update_server=False
[2025-06-04 02:58:13] 2025-06-04 06:57:56,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:58:13] 2025-06-04 06:57:56,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:58:13] 2025-06-04 06:57:56,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:58:13] 2025-06-04 06:57:56,929 | INFO     | all data control threads have been joined
[2025-06-04 02:58:13] 2025-06-04 06:57:57,041 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:58:13] 2025-06-04 06:57:57,041 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:58:13] 2025-06-04 06:57:57,041 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:58:13] 2025-06-04 06:57:57,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:58:13] 2025-06-04 06:57:57,178 | INFO     | aborting loop
[2025-06-04 02:58:13] 2025-06-04 06:57:57,288 | INFO     | all payload control threads have been joined
[2025-06-04 02:58:13] 2025-06-04 06:57:57,589 | INFO     | all job control threads have been joined
[2025-06-04 02:58:13] 2025-06-04 06:57:57,919 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:57,919 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:57,932 | INFO     | [data] control thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:58,152 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:58,183 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:58,294 | INFO     | [payload] control thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:58,594 | INFO     | [job] control thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:58,778 | INFO     | [job] validate thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:58,779 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:58,911 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:58,919 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:58,926 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:59,350 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:59,399 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:57:59,867 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:58:13] 2025-06-04 06:58:03,872 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:58:06,945 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:58:13] 2025-06-04 06:58:07,948 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:58:13] 2025-06-04 06:58:08,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139809603462976)>', '<ExcThread(monitor, started 139808970110720)>']
[2025-06-04 02:58:13] 2025-06-04 06:58:09,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:58:13] 2025-06-04 06:58:09,102 | INFO     | [monitor] control thread has ended
[2025-06-04 02:58:13] 2025-06-04 06:58:13,161 | INFO     | all workflow threads have been joined
[2025-06-04 02:58:13] 2025-06-04 06:58:13,162 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:58:13] 2025-06-04 06:58:13,162 | INFO     | traces error code: 0
[2025-06-04 02:58:13] 2025-06-04 06:58:13,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:58:13] 2025-06-04 06:58:13,321 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:58:13] 2025-06-04 06:58:13,324 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:58:13] 2025-06-04 06:58:13,328 [wrapper] pilotpid: 3729715
[2025-06-04 02:58:13] 2025-06-04 06:58:13,331 [wrapper] Pilot exit status: 0
[2025-06-04 02:58:13] 2025-06-04 06:58:13,342 [wrapper] pandaids: 6678151066
[2025-06-04 02:58:13] 2025-06-04 06:58:13,405 [wrapper] cleanup supervisor_pilot 4126755 3729716
[2025-06-04 02:58:13] 2025-06-04 06:58:13,408 [wrapper] Test setup, not cleaning
[2025-06-04 02:58:13] 2025-06-04 06:58:13,411 [wrapper] apfmon messages muted
[2025-06-04 02:58:13] 2025-06-04 06:58:13,414 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:58:13] 2025-06-04 06:58:13,416 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:58:13]  *** Error codes and diagnostics ***
[2025-06-04 02:58:13]     "exeErrorCode": 0,
[2025-06-04 02:58:13]     "exeErrorDiag": "",
[2025-06-04 02:58:13]     "pilotErrorCode": 0,
[2025-06-04 02:58:13]     "pilotErrorDiag": "",
[2025-06-04 02:58:13]  *** Listing of results directory ***
[2025-06-04 02:58:13] total 388984
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 17:57 pilot3.tar.gz
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 18:27 queuedata.json
[2025-06-04 02:58:13] -rwx------. 1 boincer umatlas     37140 Jun  3 18:27 runpilot2-wrapper.sh
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas       100 Jun  4 01:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:58:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 01:41 run_atlas
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas       105 Jun  4 01:41 job.xml
[2025-06-04 02:58:13] -rw-r--r--. 2 boincer umatlas 213534751 Jun  4 01:41 EVNT.45006593._001883.pool.root.1
[2025-06-04 02:58:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 01:41 start_atlas.sh
[2025-06-04 02:58:13] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 01:41 shared
[2025-06-04 02:58:13] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 01:41 input.tar.gz
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas         0 Jun  4 01:41 boinc_lockfile
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 01:41 pandaJob.out
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas    986745 Jun  4 01:41 agis_schedconf.cvmfs.json
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas   1603667 Jun  4 01:41 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:58:13] drwx------. 4 boincer umatlas      4096 Jun  4 01:41 pilot3
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas      6658 Jun  4 02:55 init_data.xml
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas 179377457 Jun  4 02:57 HITS.45006595._046967.pool.root.1
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas       529 Jun  4 02:57 boinc_task_state.xml
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas      1041 Jun  4 02:57 memory_monitor_summary.json
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas    329306 Jun  4 02:57 log.45006595._046967.job.log.tgz.1
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas      7716 Jun  4 02:57 heartbeat.json
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas        95 Jun  4 02:57 pilot_heartbeat.json
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas        27 Jun  4 02:58 wrapper_checkpoint.txt
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 02:58 boinc_mmap_file
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas      4425 Jun  4 02:58 pilotlog.txt
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas    455596 Jun  4 02:58 log.45006595._046967.job.log.1
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas       357 Jun  4 02:58 output.list
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas       620 Jun  4 02:58 runtime_log
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas    808960 Jun  4 02:58 result.tar.gz
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas      8651 Jun  4 02:58 runtime_log.err
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas       651 Jun  4 02:58 7EFODmEHpg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3LmKDmhY0sJm.diag
[2025-06-04 02:58:13] -rw-r--r--. 1 boincer umatlas     21405 Jun  4 02:58 stderr.txt
[2025-06-04 02:58:13] HITS file was successfully produced:
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas 179377457 Jun  4 02:57 shared/HITS.pool.root.1
[2025-06-04 02:58:13]  *** Contents of shared directory: ***
[2025-06-04 02:58:13] total 385016
[2025-06-04 02:58:13] -rw-r--r--. 2 boincer umatlas 213534751 Jun  4 01:41 ATLAS.root_0
[2025-06-04 02:58:13] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 01:41 start_atlas.sh
[2025-06-04 02:58:13] -rw-r--r--. 2 boincer umatlas    508885 Jun  4 01:41 input.tar.gz
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas 179377457 Jun  4 02:57 HITS.pool.root.1
[2025-06-04 02:58:13] -rw-------. 1 boincer umatlas    808960 Jun  4 02:58 result.tar.gz
02:58:15 (3725893): run_atlas exited; CPU time 38552.789634
02:58:15 (3725893): called boinc_finish(0)

</stderr_txt>
]]>

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