Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:33:16 (3829588): wrapper (7.7.26015): starting
23:33:16 (3829588): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 23:33:16] Arguments: --nthreads 4
[2025-06-05 23:33:16] Threads: 4
[2025-06-05 23:33:16] Checking for CVMFS
[2025-06-05 23:33:16] No cvmfs_config command found, will try listing directly
[2025-06-05 23:33:16] CVMFS is ok
[2025-06-05 23:33:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 23:33:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 23:33:16] Further information can be found at the LHC@home message board.
[2025-06-05 23:33:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 23:33:16] Checking for apptainer binary...
[2025-06-05 23:33:16] which: no apptainer in ((null))
[2025-06-05 23:33:16] apptainer is not installed, using version from CVMFS
[2025-06-05 23:33:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 23:33:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-06-05 23:33:16] apptainer works
[2025-06-05 23:33:16] Set ATHENA_PROC_NUMBER=4
[2025-06-05 23:33:16] Set ATHENA_CORE_NUMBER=4
[2025-06-05 23:33:16] Starting ATLAS job with PandaID=6678214385
[2025-06-05 23:33:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 02:20:09]  *** The last 200 lines of the pilot log: ***
[2025-06-06 02:20:09] 2025-06-06 00:16:28,518 | INFO     | PID=3833258 has CPU usage=13.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 02:20:09] 2025-06-06 00:16:28,518 | INFO     | .. there are 9 such processes running
[2025-06-06 02:20:09] 2025-06-06 00:16:28,695 | INFO     | monitor loop #714: job 0:6678214385 is in state 'finished'
[2025-06-06 02:20:09] 2025-06-06 00:16:28,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:20:09] 2025-06-06 00:16:31,198 | INFO     | monitor loop #715: job 0:6678214385 is in state 'finished'
[2025-06-06 02:20:09] 2025-06-06 00:16:31,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 02:20:09] 2025-06-06 00:16:32,544 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-06 02:20:09] 2025-06-06 00:16:32,544 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6678214385/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 02:20:09] 2025-06-06 00:16:32,545 | INFO     | extracted standard info from prmon json
[2025-06-06 02:20:09] 2025-06-06 00:16:32,545 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 02:20:09] 2025-06-06 00:16:32,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 02:20:09] 2025-06-06 00:16:32,546 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 02:20:09] 2025-06-06 00:16:32,546 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 02:20:09] 2025-06-06 00:16:32,549 | INFO     | fitting pss+swap vs Time
[2025-06-06 02:20:09] 2025-06-06 00:16:32,549 | INFO     | sum of square deviations: 1270051720.0
[2025-06-06 02:20:09] 2025-06-06 00:16:32,550 | INFO     | sum of deviations: 8206760721.000002
[2025-06-06 02:20:09] 2025-06-06 00:16:32,550 | INFO     | mean x: 1749164084.5
[2025-06-06 02:20:09] 2025-06-06 00:16:32,550 | INFO     | mean y: 2319195.1375
[2025-06-06 02:20:09] 2025-06-06 00:16:32,551 | INFO     | -- intersect: -11300347363.401176
[2025-06-06 02:20:09] 2025-06-06 00:16:32,551 | INFO     | intersect: -11300347363.401176
[2025-06-06 02:20:09] 2025-06-06 00:16:32,551 | INFO     | chi2: 1.5656070525101338
[2025-06-06 02:20:09] 2025-06-06 00:16:32,551 | INFO     | sum of square deviations: 1154663510.0
[2025-06-06 02:20:09] 2025-06-06 00:16:32,552 | INFO     | sum of deviations: 8036277554.999995
[2025-06-06 02:20:09] 2025-06-06 00:16:32,552 | INFO     | mean x: 1749163932.0
[2025-06-06 02:20:09] 2025-06-06 00:16:32,552 | INFO     | mean y: 2318969.6967741936
[2025-06-06 02:20:09] 2025-06-06 00:16:32,552 | INFO     | -- intersect: -12171588601.650257
[2025-06-06 02:20:09] 2025-06-06 00:16:32,552 | INFO     | intersect: -12171588601.650257
[2025-06-06 02:20:09] 2025-06-06 00:16:32,553 | INFO     | chi2: 1.5670503239791094
[2025-06-06 02:20:09] 2025-06-06 00:16:32,553 | INFO     | current chi2=1.5670503239791094 (change=-0.09218606077825281 %)
[2025-06-06 02:20:09] 2025-06-06 00:16:32,553 | INFO     | right removable region: 154
[2025-06-06 02:20:09] 2025-06-06 00:16:32,553 | INFO     | sum of square deviations: 1154663510.0
[2025-06-06 02:20:09] 2025-06-06 00:16:32,554 | INFO     | sum of deviations: -14799965973.0
[2025-06-06 02:20:09] 2025-06-06 00:16:32,554 | INFO     | mean x: 1749164237.0
[2025-06-06 02:20:09] 2025-06-06 00:16:32,554 | INFO     | mean y: 2349162.0258064517
[2025-06-06 02:20:09] 2025-06-06 00:16:32,555 | INFO     | -- intersect: 22422362407.95276
[2025-06-06 02:20:09] 2025-06-06 00:16:32,555 | INFO     | intersect: 22422362407.95276
[2025-06-06 02:20:09] 2025-06-06 00:16:32,555 | INFO     | chi2: 0.0487425183848094
[2025-06-06 02:20:09] 2025-06-06 00:16:32,555 | INFO     | current chi2=0.0487425183848094 (change=96.88666972298951 %)
[2025-06-06 02:20:09] 2025-06-06 00:16:32,555 | INFO     | sum of square deviations: 1046484737.5
[2025-06-06 02:20:09] 2025-06-06 00:16:32,556 | INFO     | sum of deviations: -12293937743.000004
[2025-06-06 02:20:09] 2025-06-06 00:16:32,556 | INFO     | mean x: 1749164389.5
[2025-06-06 02:20:09] 2025-06-06 00:16:32,556 | INFO     | mean y: 2345600.1466666665
[2025-06-06 02:20:09] 2025-06-06 00:16:32,556 | INFO     | -- intersect: 20551253134.295593
[2025-06-06 02:20:09] 2025-06-06 00:16:32,557 | INFO     | intersect: 20551253134.295593
[2025-06-06 02:20:09] 2025-06-06 00:16:32,557 | INFO     | chi2: 0.04356789119856119
[2025-06-06 02:20:09] 2025-06-06 00:16:32,558 | INFO     | current chi2=0.04356789119856119 (change=10.616249134679256 %)
[2025-06-06 02:20:09] 2025-06-06 00:16:32,558 | INFO     | left removable region: 20
[2025-06-06 02:20:09] 2025-06-06 00:16:32,558 | INFO     | sum of square deviations: 746051197.5
[2025-06-06 02:20:09] 2025-06-06 00:16:32,559 | INFO     | sum of deviations: -6502866996.999998
[2025-06-06 02:20:09] 2025-06-06 00:16:32,559 | INFO     | mean x: 1749164511.5
[2025-06-06 02:20:09] 2025-06-06 00:16:32,559 | INFO     | mean y: 2337536.8656716417
[2025-06-06 02:20:09] 2025-06-06 00:16:32,559 | INFO     | -- intersect: 15248723056.080624
[2025-06-06 02:20:09] 2025-06-06 00:16:32,559 | INFO     | intersect: 15248723056.080624
[2025-06-06 02:20:09] 2025-06-06 00:16:32,559 | INFO     | chi2: 0.03097523318862009
[2025-06-06 02:20:09] 2025-06-06 00:16:32,559 | INFO     | -- intersect: 15248723056.080624
[2025-06-06 02:20:09] 2025-06-06 00:16:32,560 | INFO     | current memory leak: -8.72 B/s (using 134 data points, chi2=0.03)
[2025-06-06 02:20:09] 2025-06-06 00:16:32,560 | INFO     | ..............................
[2025-06-06 02:20:09] 2025-06-06 00:16:32,560 | INFO     | . Timing measurements:
[2025-06-06 02:20:09] 2025-06-06 00:16:32,560 | INFO     | . get job = 0 s
[2025-06-06 02:20:09] 2025-06-06 00:16:32,560 | INFO     | . initial setup = 1 s
[2025-06-06 02:20:09] 2025-06-06 00:16:32,560 | INFO     | . payload setup = 7 s
[2025-06-06 02:20:09] 2025-06-06 00:16:32,560 | INFO     | . stage-in = 0 s
[2025-06-06 02:20:09] 2025-06-06 00:16:32,560 | INFO     | . payload execution = 9752 s
[2025-06-06 02:20:09] 2025-06-06 00:16:32,561 | INFO     | . stage-out = 0 s
[2025-06-06 02:20:09] 2025-06-06 00:16:32,561 | INFO     | . log creation = 0 s
[2025-06-06 02:20:09] 2025-06-06 00:16:32,561 | INFO     | ..............................
[2025-06-06 02:20:09] 2025-06-06 00:16:32,771 | INFO     | 
[2025-06-06 02:20:09] 2025-06-06 00:16:32,772 | INFO     | job summary report
[2025-06-06 02:20:09] 2025-06-06 00:16:32,772 | INFO     | --------------------------------------------------
[2025-06-06 02:20:09] 2025-06-06 00:16:32,772 | INFO     | PanDA job id: 6678214385
[2025-06-06 02:20:09] 2025-06-06 00:16:32,772 | INFO     | task id: 45006595
[2025-06-06 02:20:09] 2025-06-06 00:16:32,772 | INFO     | errors: (none)
[2025-06-06 02:20:09] 2025-06-06 00:16:32,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 02:20:09] 2025-06-06 00:16:32,772 | INFO     | pilot state: finished 
[2025-06-06 02:20:09] 2025-06-06 00:16:32,772 | INFO     | transexitcode: 0
[2025-06-06 02:20:09] 2025-06-06 00:16:32,772 | INFO     | exeerrorcode: 0
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | exeerrordiag: 
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | exitcode: 0
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | exitmsg: OK
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | cpuconsumptiontime: 37411 s
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | nevents: 400
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | neventsw: 0
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | pid: 3840314
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | pgrp: 3840314
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | corecount: 4
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | event service: False
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | sizes: {0: 2397182, 1: 2397381, 5: 2397587, 12: 2397643, 9762: 2425904, 9763: 2434867, 9764: 2435051, 9770: 2435221}
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | --------------------------------------------------
[2025-06-06 02:20:09] 2025-06-06 00:16:32,773 | INFO     | 
[2025-06-06 02:20:09] 2025-06-06 00:16:32,774 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-06-06 02:20:09] 2025-06-06 00:16:32,796 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,797 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,797 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,797 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,797 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,797 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,797 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,797 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,797 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,798 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,798 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,798 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,798 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,798 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,798 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 02:20:09] 2025-06-06 00:16:32,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,798 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 02:20:09] 2025-06-06 00:16:32,798 | INFO     | job 6678214385 has completed (purged errors)
[2025-06-06 02:20:09] 2025-06-06 00:16:32,799 | INFO     | overall cleanup function is called
[2025-06-06 02:20:09] 2025-06-06 00:16:33,806 | INFO     | --- collectZombieJob: --- 10, [3840314]
[2025-06-06 02:20:09] 2025-06-06 00:16:33,807 | INFO     | zombie collector waiting for pid 3840314
[2025-06-06 02:20:09] 2025-06-06 00:16:33,807 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 02:20:09] 2025-06-06 00:16:33,807 | INFO     | collected zombie processes
[2025-06-06 02:20:09] 2025-06-06 00:16:33,807 | INFO     | will attempt to kill all subprocesses of pid=3840314
[2025-06-06 02:20:09] 2025-06-06 00:16:34,178 | INFO     | process IDs to be killed: [3840314] (in reverse order)
[2025-06-06 02:20:09] 2025-06-06 00:16:34,297 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 02:20:09] 2025-06-06 00:16:34,297 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 02:20:09] 2025-06-06 00:16:34,309 | INFO     | did not find any defunct processes belonging to 3840314
[2025-06-06 02:20:09] 2025-06-06 00:16:34,321 | INFO     | did not find any defunct processes belonging to 3840314
[2025-06-06 02:20:09] 2025-06-06 00:16:34,321 | INFO     | ready for new job
[2025-06-06 02:20:09] 2025-06-06 00:16:34,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 02:20:09] 2025-06-06 00:16:34,323 | INFO     | **************************************
[2025-06-06 02:20:09] 2025-06-06 00:16:34,323 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 02:20:09] 2025-06-06 00:16:34,324 | INFO     | **************************************
[2025-06-06 02:20:09] 2025-06-06 00:16:34,324 | INFO     | 
[2025-06-06 02:20:09] 2025-06-06 00:16:34,327 | INFO     | architecture information:
[2025-06-06 02:20:09] 2025-06-06 00:16:34,328 | INFO     | executing command: cat /etc/os-release
[2025-06-06 02:20:09] 2025-06-06 00:16:34,343 | INFO     | cat /etc/os-release:
[2025-06-06 02:20:09] NAME="CentOS Linux"
[2025-06-06 02:20:09] VERSION="7 (Core)"
[2025-06-06 02:20:09] ID="centos"
[2025-06-06 02:20:09] ID_LIKE="rhel fedora"
[2025-06-06 02:20:09] VERSION_ID="7"
[2025-06-06 02:20:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 02:20:09] ANSI_COLOR="0;31"
[2025-06-06 02:20:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 02:20:09] HOME_URL="https://www.centos.org/"
[2025-06-06 02:20:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 02:20:09] 
[2025-06-06 02:20:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 02:20:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 02:20:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 02:20:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 02:20:09] 
[2025-06-06 02:20:09] 2025-06-06 00:16:34,343 | INFO     | **************************************
[2025-06-06 02:20:09] 2025-06-06 00:16:34,846 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-06-06 02:20:09] 2025-06-06 00:16:34,862 | INFO     | sufficient remaining disk space (652376801280 B)
[2025-06-06 02:20:09] 2025-06-06 00:16:34,862 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 02:20:09] 2025-06-06 00:16:34,863 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 02:20:09] 2025-06-06 00:16:34,863 | INFO     | update_server=False
[2025-06-06 02:20:09] 2025-06-06 00:16:34,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 02:20:09] 2025-06-06 00:16:34,863 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 02:20:09] 2025-06-06 00:16:34,863 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 02:20:09] 2025-06-06 00:16:34,864 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 02:20:09] 2025-06-06 00:16:34,864 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 02:20:09] 2025-06-06 00:16:34,864 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:20:09] 2025-06-06 00:16:34,864 | INFO     | aborting loop
[2025-06-06 02:20:09] 2025-06-06 00:16:34,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 02:20:09] 2025-06-06 00:16:35,548 | INFO     | all data control threads have been joined
[2025-06-06 02:20:09] 2025-06-06 00:16:35,825 | INFO     | all payload control threads have been joined
[2025-06-06 02:20:09] 2025-06-06 00:16:35,868 | INFO     | [job] retrieve thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:35,868 | INFO     | [job] job monitor thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:35,903 | INFO     | [payload] validate_post thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:35,919 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:35,955 | INFO     | [payload] failed_post thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:35,966 | INFO     | [data] copytool_in thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:36,545 | INFO     | all job control threads have been joined
[2025-06-06 02:20:09] 2025-06-06 00:16:36,554 | INFO     | [data] control thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:36,700 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:36,829 | INFO     | [payload] control thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:36,870 | INFO     | [data] copytool_out thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:37,168 | INFO     | [job] validate thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:37,284 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:37,509 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 02:20:09] 2025-06-06 00:16:37,550 | INFO     | [job] control thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:37,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 02:20:09] 2025-06-06 00:16:38,676 | INFO     | [job] queue monitor thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:41,514 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:45,783 | INFO     | job.realtimelogging is not enabled
[2025-06-06 02:20:09] 2025-06-06 00:16:46,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 02:20:09] 2025-06-06 00:16:46,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23419944798016)>', '<ExcThread(monitor, started 23419634546432)>']
[2025-06-06 02:20:09] 2025-06-06 00:16:46,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 02:20:09] 2025-06-06 00:16:46,924 | INFO     | [monitor] control thread has ended
[2025-06-06 02:20:09] 2025-06-06 00:16:51,903 | INFO     | all workflow threads have been joined
[2025-06-06 02:20:09] 2025-06-06 00:16:51,904 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 02:20:09] 2025-06-06 00:16:51,904 | INFO     | traces error code: 0
[2025-06-06 02:20:09] 2025-06-06 00:16:51,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 02:20:09] 2025-06-06 00:16:52,053 [wrapper] ==== pilot stdout END ====
[2025-06-06 02:20:09] 2025-06-06 00:16:52,056 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 02:20:09] 2025-06-06 00:16:52,058 [wrapper] pilotpid: 3833258
[2025-06-06 02:20:09] 2025-06-06 00:16:52,061 [wrapper] Pilot exit status: 0
[2025-06-06 02:20:09] 2025-06-06 00:16:52,078 [wrapper] pandaids: 6678214385
[2025-06-06 02:20:09] 2025-06-06 00:16:52,154 [wrapper] cleanup supervisor_pilot 4105158 3833259
[2025-06-06 02:20:09] 2025-06-06 00:16:52,179 [wrapper] Test setup, not cleaning
[2025-06-06 02:20:09] 2025-06-06 00:16:52,195 [wrapper] apfmon messages muted
[2025-06-06 02:20:09] 2025-06-06 00:16:52,201 [wrapper] ==== wrapper stdout END ====
[2025-06-06 02:20:09] 2025-06-06 00:16:52,217 [wrapper] ==== wrapper stderr END ====
[2025-06-06 02:20:09]  *** Error codes and diagnostics ***
[2025-06-06 02:20:09]     "exeErrorCode": 0,
[2025-06-06 02:20:09]     "exeErrorDiag": "",
[2025-06-06 02:20:09]     "pilotErrorCode": 0,
[2025-06-06 02:20:09]     "pilotErrorDiag": "",
[2025-06-06 02:20:09]  *** Listing of results directory ***
[2025-06-06 02:20:09] total 391232
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc      5111 Jun  4 02:32 queuedata.json
[2025-06-06 02:20:09] -rwx------ 1 boinc boinc     37140 Jun  4 02:33 runpilot2-wrapper.sh
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc       100 Jun  5 23:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 02:20:09] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 23:33 run_atlas
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc       105 Jun  5 23:33 job.xml
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc      6635 Jun  5 23:33 init_data.xml
[2025-06-06 02:20:09] -rw-r--r-- 2 boinc boinc 215670316 Jun  5 23:33 EVNT.45006593._001961.pool.root.1
[2025-06-06 02:20:09] drwxrwx--x 2 boinc boinc      4096 Jun  5 23:33 shared
[2025-06-06 02:20:09] -rw-r--r-- 2 boinc boinc    508884 Jun  5 23:33 input.tar.gz
[2025-06-06 02:20:09] -rw-r--r-- 2 boinc boinc     15093 Jun  5 23:33 start_atlas.sh
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc         0 Jun  5 23:33 boinc_lockfile
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc      2525 Jun  5 23:33 pandaJob.out
[2025-06-06 02:20:09] -rw------- 1 boinc boinc    987599 Jun  5 23:33 agis_schedconf.cvmfs.json
[2025-06-06 02:20:09] -rw------- 1 boinc boinc   1598969 Jun  5 23:33 agis_ddmendpoints.agis.ALL.json
[2025-06-06 02:20:09] drwx------ 4 boinc boinc      4096 Jun  5 23:33 pilot3
[2025-06-06 02:20:09] -rw------- 1 boinc boinc 178658396 Jun  6 02:15 HITS.45006595._048900.pool.root.1
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc       529 Jun  6 02:16 boinc_task_state.xml
[2025-06-06 02:20:09] -rw------- 1 boinc boinc        95 Jun  6 02:16 pilot_heartbeat.json
[2025-06-06 02:20:09] -rw------- 1 boinc boinc      1036 Jun  6 02:16 memory_monitor_summary.json
[2025-06-06 02:20:09] -rw------- 1 boinc boinc    304802 Jun  6 02:16 log.45006595._048900.job.log.tgz.1
[2025-06-06 02:20:09] -rw------- 1 boinc boinc      7724 Jun  6 02:16 heartbeat.json
[2025-06-06 02:20:09] -rw------- 1 boinc boinc      4558 Jun  6 02:16 pilotlog.txt
[2025-06-06 02:20:09] -rw------- 1 boinc boinc    924347 Jun  6 02:16 log.45006595._048900.job.log.1
[2025-06-06 02:20:09] -rw------- 1 boinc boinc       357 Jun  6 02:16 output.list
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc       620 Jun  6 02:16 runtime_log
[2025-06-06 02:20:09] -rw------- 1 boinc boinc   1249280 Jun  6 02:16 result.tar.gz
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc      9025 Jun  6 02:16 runtime_log.err
[2025-06-06 02:20:09] -rw------- 1 boinc boinc       663 Jun  6 02:16 dhYNDmWFrg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmucmKDm5ssTun.diag
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc      8192 Jun  6 02:20 boinc_mmap_file
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc     20939 Jun  6 02:20 stderr.txt
[2025-06-06 02:20:09] -rw-r--r-- 1 boinc boinc        26 Jun  6 02:20 wrapper_checkpoint.txt
[2025-06-06 02:20:09] HITS file was successfully produced:
[2025-06-06 02:20:09] -rw------- 1 boinc boinc 178658396 Jun  6 02:15 shared/HITS.pool.root.1
[2025-06-06 02:20:09]  *** Contents of shared directory: ***
[2025-06-06 02:20:09] total 386832
[2025-06-06 02:20:09] -rw-r--r-- 2 boinc boinc 215670316 Jun  5 23:33 ATLAS.root_0
[2025-06-06 02:20:09] -rw-r--r-- 2 boinc boinc    508884 Jun  5 23:33 input.tar.gz
[2025-06-06 02:20:09] -rw-r--r-- 2 boinc boinc     15093 Jun  5 23:33 start_atlas.sh
[2025-06-06 02:20:09] -rw------- 1 boinc boinc 178658396 Jun  6 02:15 HITS.pool.root.1
[2025-06-06 02:20:09] -rw------- 1 boinc boinc   1249280 Jun  6 02:16 result.tar.gz
02:20:11 (3829588): run_atlas exited; CPU time 37781.270646
02:20:11 (3829588): called boinc_finish(0)

</stderr_txt>
]]>

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