Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:25:43 (20755): wrapper (7.7.26015): starting
01:25:43 (20755): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 01:25:43] Arguments: --nthreads 12
[2025-06-04 01:25:43] Threads: 12
[2025-06-04 01:25:43] Checking for CVMFS
[2025-06-04 01:25:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:25:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:25:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:25:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:25:43] 2.11.2.0 2913 35259 86144 146769 0 55 18201927 20275201 1 130560 0 15578139 99.982 6330394 7629 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 01:25:43] CVMFS is ok
[2025-06-04 01:25:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:25:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:25:43] Further information can be found at the LHC@home message board.
[2025-06-04 01:25:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:25:43] Checking for apptainer binary...
[2025-06-04 01:25:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:25:43] Running /usr/bin/apptainer --version
[2025-06-04 01:25:43] apptainer version 1.3.2-1.el7
[2025-06-04 01:25:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:25:45] c-205-6.aglt2.org
[2025-06-04 01:25:45] apptainer works
[2025-06-04 01:25:45] Set ATHENA_PROC_NUMBER=12
[2025-06-04 01:25:45] Set ATHENA_CORE_NUMBER=12
[2025-06-04 01:25:45] Starting ATLAS job with PandaID=6678244480
[2025-06-04 01:25:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:30:27]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:30:27]  filetype=log
[2025-06-04 02:30:27]  guid=cc0f6059-cd89-4282-a4d8-527de2becd03
[2025-06-04 02:30:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 02:30:27]  is_altstaged=None
[2025-06-04 02:30:27]  is_tar=False
[2025-06-04 02:30:27]  lfn=log.45006595._049485.job.log.tgz.1
[2025-06-04 02:30:27]  mtime=0
[2025-06-04 02:30:27]  protocol_id=None
[2025-06-04 02:30:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 02:30:27]  replicas=None
[2025-06-04 02:30:27]  scope=mc23_13p6TeV
[2025-06-04 02:30:27]  status=None
[2025-06-04 02:30:27]  status_code=0
[2025-06-04 02:30:27]  storage_token=
[2025-06-04 02:30:27]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678244480/log.45006595._049485.job.log.tgz.1
[2025-06-04 02:30:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/09/log.45006595._049485.job.log.tgz.1
[2025-06-04 02:30:27]  workdir=None
[2025-06-04 02:30:27] ]
[2025-06-04 02:30:27] 2025-06-04 06:29:59,643 | INFO     | transferring file log.45006595._049485.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678244480/log.45006595._049485.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:30:27] 2025-06-04 06:29:59,644 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678244480/log.45006595._049485.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._049485.job
[2025-06-04 02:30:27] 2025-06-04 06:29:59,665 | INFO     | adding to output.list: log.45006595._049485.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/09/log.45006595._049485.job.log.tg
[2025-06-04 02:30:27] 2025-06-04 06:29:59,666 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:30:27] 2025-06-04 06:29:59,666 | INFO     | summary of transferred files:
[2025-06-04 02:30:27] 2025-06-04 06:29:59,666 | INFO     |  -- lfn=log.45006595._049485.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:30:27] 2025-06-04 06:29:59,667 | INFO     | stage-out finished correctly
[2025-06-04 02:30:27] 2025-06-04 06:30:02,267 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:30:27] 2025-06-04 06:30:02,713 | INFO     | job 6678244480 has state=finished
[2025-06-04 02:30:27] 2025-06-04 06:30:02,713 | INFO     | preparing for final server update for job 6678244480 in state='finished'
[2025-06-04 02:30:27] 2025-06-04 06:30:02,714 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:30:27] 2025-06-04 06:30:02,714 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:30:27] 2025-06-04 06:30:02,714 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:30:27] 2025-06-04 06:30:02,714 | INFO     | job 6678244480 has finished - writing final server update
[2025-06-04 02:30:27] 2025-06-04 06:30:02,715 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:30:27] 2025-06-04 06:30:02,716 | INFO     | executing command: lscpu
[2025-06-04 02:30:27] 2025-06-04 06:30:02,744 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:30:27] 2025-06-04 06:30:04,903 | WARNING  | process 30817 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 02:30:27] 2025-06-04 06:30:04,904 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678244480/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:30:27] 2025-06-04 06:30:04,994 | INFO     | number of running child processes to parent process 30817: 1
[2025-06-04 02:30:27] 2025-06-04 06:30:04,994 | INFO     | maximum number of monitored processes: 6
[2025-06-04 02:30:27] 2025-06-04 06:30:07,442 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 02:30:27] 2025-06-04 06:30:07,442 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678244480/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:30:27] 2025-06-04 06:30:07,443 | INFO     | extracted standard info from prmon json
[2025-06-04 02:30:27] 2025-06-04 06:30:07,443 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:30:27] 2025-06-04 06:30:07,444 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:30:27] 2025-06-04 06:30:07,444 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:30:27] 2025-06-04 06:30:07,444 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:30:27] 2025-06-04 06:30:07,446 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:30:27] 2025-06-04 06:30:07,447 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 02:30:27] 2025-06-04 06:30:07,447 | INFO     | sum of deviations: -5721360922.0
[2025-06-04 02:30:27] 2025-06-04 06:30:07,447 | INFO     | mean x: 1749016770.5
[2025-06-04 02:30:27] 2025-06-04 06:30:07,447 | INFO     | mean y: 2844729.5
[2025-06-04 02:30:27] 2025-06-04 06:30:07,448 | INFO     | -- intersect: 183821389209.38742
[2025-06-04 02:30:27] 2025-06-04 06:30:07,448 | INFO     | intersect: 183821389209.38742
[2025-06-04 02:30:27] 2025-06-04 06:30:07,448 | INFO     | chi2: 0.05037530234069245
[2025-06-04 02:30:27] 2025-06-04 06:30:07,448 | INFO     | -- intersect: 183821389209.38742
[2025-06-04 02:30:27] 2025-06-04 06:30:07,448 | INFO     | current memory leak: -105.10 B/s (using 56 data points, chi2=0.05)
[2025-06-04 02:30:27] 2025-06-04 06:30:07,449 | INFO     | ..............................
[2025-06-04 02:30:27] 2025-06-04 06:30:07,449 | INFO     | . Timing measurements:
[2025-06-04 02:30:27] 2025-06-04 06:30:07,449 | INFO     | . get job = 0 s
[2025-06-04 02:30:27] 2025-06-04 06:30:07,449 | INFO     | . initial setup = 2 s
[2025-06-04 02:30:27] 2025-06-04 06:30:07,449 | INFO     | . payload setup = 9 s
[2025-06-04 02:30:27] 2025-06-04 06:30:07,449 | INFO     | . stage-in = 0 s
[2025-06-04 02:30:27] 2025-06-04 06:30:07,450 | INFO     | . payload execution = 3811 s
[2025-06-04 02:30:27] 2025-06-04 06:30:07,450 | INFO     | . stage-out = 0 s
[2025-06-04 02:30:27] 2025-06-04 06:30:07,450 | INFO     | . log creation = 0 s
[2025-06-04 02:30:27] 2025-06-04 06:30:07,450 | INFO     | ..............................
[2025-06-04 02:30:27] 2025-06-04 06:30:07,731 | INFO     | 
[2025-06-04 02:30:27] 2025-06-04 06:30:07,731 | INFO     | job summary report
[2025-06-04 02:30:27] 2025-06-04 06:30:07,731 | INFO     | --------------------------------------------------
[2025-06-04 02:30:27] 2025-06-04 06:30:07,731 | INFO     | PanDA job id: 6678244480
[2025-06-04 02:30:27] 2025-06-04 06:30:07,731 | INFO     | task id: 45006595
[2025-06-04 02:30:27] 2025-06-04 06:30:07,731 | INFO     | errors: (none)
[2025-06-04 02:30:27] 2025-06-04 06:30:07,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:30:27] 2025-06-04 06:30:07,732 | INFO     | pilot state: finished 
[2025-06-04 02:30:27] 2025-06-04 06:30:07,732 | INFO     | transexitcode: 0
[2025-06-04 02:30:27] 2025-06-04 06:30:07,732 | INFO     | exeerrorcode: 0
[2025-06-04 02:30:27] 2025-06-04 06:30:07,732 | INFO     | exeerrordiag: 
[2025-06-04 02:30:27] 2025-06-04 06:30:07,732 | INFO     | exitcode: 0
[2025-06-04 02:30:27] 2025-06-04 06:30:07,733 | INFO     | exitmsg: OK
[2025-06-04 02:30:27] 2025-06-04 06:30:07,733 | INFO     | cpuconsumptiontime: 40401 s
[2025-06-04 02:30:27] 2025-06-04 06:30:07,733 | INFO     | nevents: 400
[2025-06-04 02:30:27] 2025-06-04 06:30:07,733 | INFO     | neventsw: 0
[2025-06-04 02:30:27] 2025-06-04 06:30:07,733 | INFO     | pid: 30817
[2025-06-04 02:30:27] 2025-06-04 06:30:07,733 | INFO     | pgrp: 30817
[2025-06-04 02:30:27] 2025-06-04 06:30:07,734 | INFO     | corecount: 12
[2025-06-04 02:30:27] 2025-06-04 06:30:07,734 | INFO     | event service: False
[2025-06-04 02:30:27] 2025-06-04 06:30:07,734 | INFO     | sizes: {0: 2405013, 1: 2405212, 5: 2405418, 11: 2405474, 3825: 2431097, 3826: 2440038, 3828: 2440222, 3834: 2440392}
[2025-06-04 02:30:27] 2025-06-04 06:30:07,734 | INFO     | --------------------------------------------------
[2025-06-04 02:30:27] 2025-06-04 06:30:07,734 | INFO     | 
[2025-06-04 02:30:27] 2025-06-04 06:30:07,735 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:30:27] 2025-06-04 06:30:07,759 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,762 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,762 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,762 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,762 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,763 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,763 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:30:27] 2025-06-04 06:30:07,763 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,763 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:30:27] 2025-06-04 06:30:07,763 | INFO     | job 6678244480 has completed (purged errors)
[2025-06-04 02:30:27] 2025-06-04 06:30:07,764 | INFO     | overall cleanup function is called
[2025-06-04 02:30:27] 2025-06-04 06:30:08,772 | INFO     | --- collectZombieJob: --- 10, [30817]
[2025-06-04 02:30:27] 2025-06-04 06:30:08,772 | INFO     | zombie collector waiting for pid 30817
[2025-06-04 02:30:27] 2025-06-04 06:30:08,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:30:27] 2025-06-04 06:30:08,772 | INFO     | collected zombie processes
[2025-06-04 02:30:27] 2025-06-04 06:30:08,772 | INFO     | will attempt to kill all subprocesses of pid=30817
[2025-06-04 02:30:27] 2025-06-04 06:30:08,867 | INFO     | process IDs to be killed: [30817] (in reverse order)
[2025-06-04 02:30:27] 2025-06-04 06:30:08,929 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:30:27] 2025-06-04 06:30:08,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:30:27] 2025-06-04 06:30:08,934 | INFO     | did not find any defunct processes belonging to 30817
[2025-06-04 02:30:27] 2025-06-04 06:30:08,937 | INFO     | did not find any defunct processes belonging to 30817
[2025-06-04 02:30:27] 2025-06-04 06:30:08,938 | INFO     | ready for new job
[2025-06-04 02:30:27] 2025-06-04 06:30:08,938 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:30:27] 2025-06-04 06:30:08,939 | INFO     | **************************************
[2025-06-04 02:30:27] 2025-06-04 06:30:08,939 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:30:27] 2025-06-04 06:30:08,939 | INFO     | **************************************
[2025-06-04 02:30:27] 2025-06-04 06:30:08,939 | INFO     | 
[2025-06-04 02:30:27] 2025-06-04 06:30:08,940 | INFO     | architecture information:
[2025-06-04 02:30:27] 2025-06-04 06:30:08,940 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:30:27] 2025-06-04 06:30:08,956 | INFO     | cat /etc/os-release:
[2025-06-04 02:30:27] NAME="CentOS Linux"
[2025-06-04 02:30:27] VERSION="7 (Core)"
[2025-06-04 02:30:27] ID="centos"
[2025-06-04 02:30:27] ID_LIKE="rhel fedora"
[2025-06-04 02:30:27] VERSION_ID="7"
[2025-06-04 02:30:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:30:27] ANSI_COLOR="0;31"
[2025-06-04 02:30:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:30:27] HOME_URL="https://www.centos.org/"
[2025-06-04 02:30:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:30:27] 
[2025-06-04 02:30:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:30:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:30:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:30:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:30:27] 
[2025-06-04 02:30:27] 2025-06-04 06:30:08,956 | INFO     | **************************************
[2025-06-04 02:30:27] 2025-06-04 06:30:09,459 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:30:27] 2025-06-04 06:30:09,476 | INFO     | sufficient remaining disk space (29418848256 B)
[2025-06-04 02:30:27] 2025-06-04 06:30:09,476 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:30:27] 2025-06-04 06:30:09,477 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:30:27] 2025-06-04 06:30:09,477 | INFO     | update_server=False
[2025-06-04 02:30:27] 2025-06-04 06:30:09,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:30:27] 2025-06-04 06:30:09,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:30:27] 2025-06-04 06:30:09,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:30:27] 2025-06-04 06:30:09,478 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 02:30:27] 2025-06-04 06:30:09,478 | INFO     | aborting loop
[2025-06-04 02:30:27] 2025-06-04 06:30:09,478 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:30:27] 2025-06-04 06:30:09,479 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:30:27] 2025-06-04 06:30:09,479 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:30:27] 2025-06-04 06:30:09,894 | INFO     | all job control threads have been joined
[2025-06-04 02:30:27] 2025-06-04 06:30:10,265 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:30:27] 2025-06-04 06:30:10,482 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:10,483 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:10,484 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:10,503 | INFO     | all data control threads have been joined
[2025-06-04 02:30:27] 2025-06-04 06:30:10,664 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:10,747 | INFO     | all payload control threads have been joined
[2025-06-04 02:30:27] 2025-06-04 06:30:10,892 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:10,899 | INFO     | [job] control thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:11,091 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:11,167 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:11,167 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:11,505 | INFO     | [data] control thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:11,586 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:11,752 | INFO     | [payload] control thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:11,855 | INFO     | [job] validate thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:12,271 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:12,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:30:27] 2025-06-04 06:30:16,865 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:19,609 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:30:27] 2025-06-04 06:30:20,614 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:30:27] 2025-06-04 06:30:22,372 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140201354110784)>', '<ExcThread(monitor, started 140200449652480)>']
[2025-06-04 02:30:27] 2025-06-04 06:30:22,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:30:27] 2025-06-04 06:30:22,543 | INFO     | [monitor] control thread has ended
[2025-06-04 02:30:27] 2025-06-04 06:30:27,374 | INFO     | all workflow threads have been joined
[2025-06-04 02:30:27] 2025-06-04 06:30:27,374 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:30:27] 2025-06-04 06:30:27,374 | INFO     | traces error code: 0
[2025-06-04 02:30:27] 2025-06-04 06:30:27,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:30:27] 2025-06-04 06:30:27,459 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:30:27] 2025-06-04 06:30:27,462 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:30:27] 2025-06-04 06:30:27,466 [wrapper] pilotpid: 24352
[2025-06-04 02:30:27] 2025-06-04 06:30:27,469 [wrapper] Pilot exit status: 0
[2025-06-04 02:30:27] 2025-06-04 06:30:27,483 [wrapper] pandaids: 6678244480
[2025-06-04 02:30:27] 2025-06-04 06:30:27,519 [wrapper] cleanup supervisor_pilot  8429 24353
[2025-06-04 02:30:27] 2025-06-04 06:30:27,523 [wrapper] Test setup, not cleaning
[2025-06-04 02:30:27] 2025-06-04 06:30:27,527 [wrapper] apfmon messages muted
[2025-06-04 02:30:27] 2025-06-04 06:30:27,531 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:30:27] 2025-06-04 06:30:27,534 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:30:27]  *** Error codes and diagnostics ***
[2025-06-04 02:30:27]     "exeErrorCode": 0,
[2025-06-04 02:30:27]     "exeErrorDiag": "",
[2025-06-04 02:30:27]     "pilotErrorCode": 0,
[2025-06-04 02:30:27]     "pilotErrorDiag": "",
[2025-06-04 02:30:27]  *** Listing of results directory ***
[2025-06-04 02:30:27] total 390616
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 19:58 pilot3.tar.gz
[2025-06-04 02:30:27] -rwx------ 1 boincer umatlas     37140 Jun  3 20:55 runpilot2-wrapper.sh
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 20:55 queuedata.json
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas       100 Jun  4 01:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:30:27] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 01:25 run_atlas
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas       105 Jun  4 01:25 job.xml
[2025-06-04 02:30:27] -rw-r--r-- 2 boincer umatlas 216166565 Jun  4 01:25 EVNT.45006593._001984.pool.root.1
[2025-06-04 02:30:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:25 start_atlas.sh
[2025-06-04 02:30:27] drwxrwx--x 2 boincer umatlas      4096 Jun  4 01:25 shared
[2025-06-04 02:30:27] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 01:25 input.tar.gz
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas         0 Jun  4 01:25 boinc_lockfile
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 01:25 pandaJob.out
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas    986745 Jun  4 01:25 agis_schedconf.cvmfs.json
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas   1603667 Jun  4 01:25 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:30:27] drwx------ 4 boincer umatlas      4096 Jun  4 01:25 pilot3
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas      5867 Jun  4 02:19 init_data.xml
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas 178513129 Jun  4 02:29 HITS.45006595._049485.pool.root.1
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas        95 Jun  4 02:29 pilot_heartbeat.json
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas       529 Jun  4 02:29 boinc_task_state.xml
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas      1048 Jun  4 02:29 memory_monitor_summary.json
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas    358631 Jun  4 02:29 log.45006595._049485.job.log.tgz.1
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas      7751 Jun  4 02:30 heartbeat.json
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 02:30 boinc_mmap_file
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas        27 Jun  4 02:30 wrapper_checkpoint.txt
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas      4548 Jun  4 02:30 pilotlog.txt
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas    378063 Jun  4 02:30 log.45006595._049485.job.log.1
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas       357 Jun  4 02:30 output.list
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas       620 Jun  4 02:30 runtime_log
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas    757760 Jun  4 02:30 result.tar.gz
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 02:30 runtime_log.err
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas       658 Jun  4 02:30 GnVKDmUarg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIimKDmyoMZpn.diag
[2025-06-04 02:30:27] -rw-r--r-- 1 boincer umatlas     21179 Jun  4 02:30 stderr.txt
[2025-06-04 02:30:27] HITS file was successfully produced:
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas 178513129 Jun  4 02:29 shared/HITS.pool.root.1
[2025-06-04 02:30:27]  *** Contents of shared directory: ***
[2025-06-04 02:30:27] total 386696
[2025-06-04 02:30:27] -rw-r--r-- 2 boincer umatlas 216166565 Jun  4 01:25 ATLAS.root_0
[2025-06-04 02:30:27] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:25 start_atlas.sh
[2025-06-04 02:30:27] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 01:25 input.tar.gz
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas 178513129 Jun  4 02:29 HITS.pool.root.1
[2025-06-04 02:30:27] -rw------- 1 boincer umatlas    757760 Jun  4 02:30 result.tar.gz
02:30:29 (20755): run_atlas exited; CPU time 40374.571687
02:30:29 (20755): called boinc_finish(0)

</stderr_txt>
]]>

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