Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:30:11 (30209): wrapper (7.7.26015): starting
01:30:11 (30209): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:30:11] Arguments: --nthreads 8
[2025-06-04 01:30:11] Threads: 8
[2025-06-04 01:30:11] Checking for CVMFS
[2025-06-04 01:30:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:30:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:30:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:30:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:30:12] 2.11.2.0 2800 35264 94580 146769 2 55 14706946 20275201 1 130560 0 11805138 99.956 7404849 8608 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 01:30:12] CVMFS is ok
[2025-06-04 01:30:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:30:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:30:12] Further information can be found at the LHC@home message board.
[2025-06-04 01:30:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:30:12] Checking for apptainer binary...
[2025-06-04 01:30:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:30:12] Running /usr/bin/apptainer --version
[2025-06-04 01:30:12] apptainer version 1.3.2-1.el7
[2025-06-04 01:30:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:30:13] c-204-36.aglt2.org
[2025-06-04 01:30:13] apptainer works
[2025-06-04 01:30:13] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:30:13] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:30:13] Starting ATLAS job with PandaID=6678217987
[2025-06-04 01:30:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:25:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:25:21] 2025-06-04 07:24:57,741 | INFO     | executing command: lscpu
[2025-06-04 03:25:21] 2025-06-04 07:24:57,772 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 03:25:21] 2025-06-04 07:24:59,687 | INFO     | PID=1374 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 03:25:21] 2025-06-04 07:24:59,972 | INFO     | monitor loop #509: job 0:6678217987 is in state 'finished'
[2025-06-04 03:25:21] 2025-06-04 07:24:59,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:25:21] 2025-06-04 07:25:02,475 | INFO     | monitor loop #510: job 0:6678217987 is in state 'finished'
[2025-06-04 03:25:21] 2025-06-04 07:25:02,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 03:25:21] 2025-06-04 07:25:03,241 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 03:25:21] 2025-06-04 07:25:03,241 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678217987/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:25:21] 2025-06-04 07:25:03,242 | INFO     | extracted standard info from prmon json
[2025-06-04 03:25:21] 2025-06-04 07:25:03,243 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:25:21] 2025-06-04 07:25:03,243 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:25:21] 2025-06-04 07:25:03,243 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:25:21] 2025-06-04 07:25:03,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:25:21] 2025-06-04 07:25:03,247 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:25:21] 2025-06-04 07:25:03,247 | INFO     | sum of square deviations: 435610028.0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,248 | INFO     | sum of deviations: 1283791847.9999993
[2025-06-04 03:25:21] 2025-06-04 07:25:03,248 | INFO     | mean x: 1749018446.5
[2025-06-04 03:25:21] 2025-06-04 07:25:03,248 | INFO     | mean y: 2524376.160714286
[2025-06-04 03:25:21] 2025-06-04 07:25:03,248 | INFO     | -- intersect: -5152030109.022816
[2025-06-04 03:25:21] 2025-06-04 07:25:03,248 | INFO     | intersect: -5152030109.022816
[2025-06-04 03:25:21] 2025-06-04 07:25:03,248 | INFO     | chi2: 1.6261714273316472
[2025-06-04 03:25:21] 2025-06-04 07:25:03,249 | INFO     | sum of square deviations: 379832238.0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,249 | INFO     | sum of deviations: 1626655341.000001
[2025-06-04 03:25:21] 2025-06-04 07:25:03,249 | INFO     | mean x: 1749018294.0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,249 | INFO     | mean y: 2525314.3925233646
[2025-06-04 03:25:21] 2025-06-04 07:25:03,250 | INFO     | -- intersect: -7487755037.855538
[2025-06-04 03:25:21] 2025-06-04 07:25:03,250 | INFO     | intersect: -7487755037.855538
[2025-06-04 03:25:21] 2025-06-04 07:25:03,250 | INFO     | chi2: 1.6286741784720444
[2025-06-04 03:25:21] 2025-06-04 07:25:03,250 | INFO     | current chi2=1.6286741784720444 (change=-0.15390450836440622 %)
[2025-06-04 03:25:21] 2025-06-04 07:25:03,250 | INFO     | right removable region: 106
[2025-06-04 03:25:21] 2025-06-04 07:25:03,250 | INFO     | sum of square deviations: 379832238.0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,251 | INFO     | sum of deviations: -15634454635.0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,251 | INFO     | mean x: 1749018599.0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,251 | INFO     | mean y: 2569683.0841121497
[2025-06-04 03:25:21] 2025-06-04 07:25:03,251 | INFO     | -- intersect: 71994752563.13957
[2025-06-04 03:25:21] 2025-06-04 07:25:03,251 | INFO     | intersect: 71994752563.13957
[2025-06-04 03:25:21] 2025-06-04 07:25:03,252 | INFO     | chi2: 0.11994391809197953
[2025-06-04 03:25:21] 2025-06-04 07:25:03,252 | INFO     | current chi2=0.11994391809197953 (change=92.62415289827143 %)
[2025-06-04 03:25:21] 2025-06-04 07:25:03,252 | INFO     | sum of square deviations: 329031285.5
[2025-06-04 03:25:21] 2025-06-04 07:25:03,253 | INFO     | sum of deviations: -15232263945.0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,253 | INFO     | mean x: 1749018751.5
[2025-06-04 03:25:21] 2025-06-04 07:25:03,253 | INFO     | mean y: 2568304.2352941176
[2025-06-04 03:25:21] 2025-06-04 07:25:03,253 | INFO     | -- intersect: 80972118744.15042
[2025-06-04 03:25:21] 2025-06-04 07:25:03,253 | INFO     | intersect: 80972118744.15042
[2025-06-04 03:25:21] 2025-06-04 07:25:03,253 | INFO     | chi2: 0.09636028403629723
[2025-06-04 03:25:21] 2025-06-04 07:25:03,253 | INFO     | current chi2=0.09636028403629723 (change=19.662217502013803 %)
[2025-06-04 03:25:21] 2025-06-04 07:25:03,254 | INFO     | left removable region: 20
[2025-06-04 03:25:21] 2025-06-04 07:25:03,254 | INFO     | sum of square deviations: 197203697.5
[2025-06-04 03:25:21] 2025-06-04 07:25:03,254 | INFO     | sum of deviations: -8332118283.0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,254 | INFO     | mean x: 1749018873.5
[2025-06-04 03:25:21] 2025-06-04 07:25:03,254 | INFO     | mean y: 2549571.8604651163
[2025-06-04 03:25:21] 2025-06-04 07:25:03,255 | INFO     | -- intersect: 73900921245.14723
[2025-06-04 03:25:21] 2025-06-04 07:25:03,255 | INFO     | intersect: 73900921245.14723
[2025-06-04 03:25:21] 2025-06-04 07:25:03,255 | INFO     | chi2: 0.08197205517039968
[2025-06-04 03:25:21] 2025-06-04 07:25:03,255 | INFO     | -- intersect: 73900921245.14723
[2025-06-04 03:25:21] 2025-06-04 07:25:03,255 | INFO     | current memory leak: -42.25 B/s (using 86 data points, chi2=0.08)
[2025-06-04 03:25:21] 2025-06-04 07:25:03,256 | INFO     | ..............................
[2025-06-04 03:25:21] 2025-06-04 07:25:03,256 | INFO     | . Timing measurements:
[2025-06-04 03:25:21] 2025-06-04 07:25:03,256 | INFO     | . get job = 0 s
[2025-06-04 03:25:21] 2025-06-04 07:25:03,256 | INFO     | . initial setup = 2 s
[2025-06-04 03:25:21] 2025-06-04 07:25:03,256 | INFO     | . payload setup = 10 s
[2025-06-04 03:25:21] 2025-06-04 07:25:03,256 | INFO     | . stage-in = 0 s
[2025-06-04 03:25:21] 2025-06-04 07:25:03,256 | INFO     | . payload execution = 6835 s
[2025-06-04 03:25:21] 2025-06-04 07:25:03,257 | INFO     | . stage-out = 0 s
[2025-06-04 03:25:21] 2025-06-04 07:25:03,257 | INFO     | . log creation = 0 s
[2025-06-04 03:25:21] 2025-06-04 07:25:03,257 | INFO     | ..............................
[2025-06-04 03:25:21] 2025-06-04 07:25:03,353 | INFO     | 
[2025-06-04 03:25:21] 2025-06-04 07:25:03,353 | INFO     | job summary report
[2025-06-04 03:25:21] 2025-06-04 07:25:03,353 | INFO     | --------------------------------------------------
[2025-06-04 03:25:21] 2025-06-04 07:25:03,354 | INFO     | PanDA job id: 6678217987
[2025-06-04 03:25:21] 2025-06-04 07:25:03,354 | INFO     | task id: 45006595
[2025-06-04 03:25:21] 2025-06-04 07:25:03,354 | INFO     | errors: (none)
[2025-06-04 03:25:21] 2025-06-04 07:25:03,354 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:25:21] 2025-06-04 07:25:03,354 | INFO     | pilot state: finished 
[2025-06-04 03:25:21] 2025-06-04 07:25:03,354 | INFO     | transexitcode: 0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,355 | INFO     | exeerrorcode: 0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,355 | INFO     | exeerrordiag: 
[2025-06-04 03:25:21] 2025-06-04 07:25:03,355 | INFO     | exitcode: 0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,355 | INFO     | exitmsg: OK
[2025-06-04 03:25:21] 2025-06-04 07:25:03,355 | INFO     | cpuconsumptiontime: 50460 s
[2025-06-04 03:25:21] 2025-06-04 07:25:03,355 | INFO     | nevents: 400
[2025-06-04 03:25:21] 2025-06-04 07:25:03,356 | INFO     | neventsw: 0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,356 | INFO     | pid: 8993
[2025-06-04 03:25:21] 2025-06-04 07:25:03,356 | INFO     | pgrp: 8993
[2025-06-04 03:25:21] 2025-06-04 07:25:03,356 | INFO     | corecount: 8
[2025-06-04 03:25:21] 2025-06-04 07:25:03,356 | INFO     | event service: False
[2025-06-04 03:25:21] 2025-06-04 07:25:03,356 | INFO     | sizes: {0: 2405013, 1: 2405212, 6: 2405418, 12: 2405446, 6849: 2432466, 6850: 2441591, 6858: 2441705}
[2025-06-04 03:25:21] 2025-06-04 07:25:03,356 | INFO     | --------------------------------------------------
[2025-06-04 03:25:21] 2025-06-04 07:25:03,357 | INFO     | 
[2025-06-04 03:25:21] 2025-06-04 07:25:03,357 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 03:25:21] 2025-06-04 07:25:03,382 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,383 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,383 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,383 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,384 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,385 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,385 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,385 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,385 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,386 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,386 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,386 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,387 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:25:21] 2025-06-04 07:25:03,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,387 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:25:21] 2025-06-04 07:25:03,387 | INFO     | job 6678217987 has completed (purged errors)
[2025-06-04 03:25:21] 2025-06-04 07:25:03,387 | INFO     | overall cleanup function is called
[2025-06-04 03:25:21] 2025-06-04 07:25:04,396 | INFO     | --- collectZombieJob: --- 10, [8993]
[2025-06-04 03:25:21] 2025-06-04 07:25:04,396 | INFO     | zombie collector waiting for pid 8993
[2025-06-04 03:25:21] 2025-06-04 07:25:04,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:25:21] 2025-06-04 07:25:04,396 | INFO     | collected zombie processes
[2025-06-04 03:25:21] 2025-06-04 07:25:04,396 | INFO     | will attempt to kill all subprocesses of pid=8993
[2025-06-04 03:25:21] 2025-06-04 07:25:04,492 | INFO     | process IDs to be killed: [8993] (in reverse order)
[2025-06-04 03:25:21] 2025-06-04 07:25:04,546 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:25:21] 2025-06-04 07:25:04,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:25:21] 2025-06-04 07:25:04,552 | INFO     | did not find any defunct processes belonging to 8993
[2025-06-04 03:25:21] 2025-06-04 07:25:04,556 | INFO     | did not find any defunct processes belonging to 8993
[2025-06-04 03:25:21] 2025-06-04 07:25:04,556 | INFO     | ready for new job
[2025-06-04 03:25:21] 2025-06-04 07:25:04,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:25:21] 2025-06-04 07:25:04,558 | INFO     | **************************************
[2025-06-04 03:25:21] 2025-06-04 07:25:04,558 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:25:21] 2025-06-04 07:25:04,559 | INFO     | **************************************
[2025-06-04 03:25:21] 2025-06-04 07:25:04,559 | INFO     | 
[2025-06-04 03:25:21] 2025-06-04 07:25:04,559 | INFO     | architecture information:
[2025-06-04 03:25:21] 2025-06-04 07:25:04,560 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:25:21] 2025-06-04 07:25:04,577 | INFO     | cat /etc/os-release:
[2025-06-04 03:25:21] NAME="CentOS Linux"
[2025-06-04 03:25:21] VERSION="7 (Core)"
[2025-06-04 03:25:21] ID="centos"
[2025-06-04 03:25:21] ID_LIKE="rhel fedora"
[2025-06-04 03:25:21] VERSION_ID="7"
[2025-06-04 03:25:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:25:21] ANSI_COLOR="0;31"
[2025-06-04 03:25:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:25:21] HOME_URL="https://www.centos.org/"
[2025-06-04 03:25:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:25:21] 
[2025-06-04 03:25:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:25:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:25:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:25:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:25:21] 
[2025-06-04 03:25:21] 2025-06-04 07:25:04,578 | INFO     | **************************************
[2025-06-04 03:25:21] 2025-06-04 07:25:05,079 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 03:25:21] 2025-06-04 07:25:05,099 | INFO     | sufficient remaining disk space (18608029696 B)
[2025-06-04 03:25:21] 2025-06-04 07:25:05,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:25:21] 2025-06-04 07:25:05,099 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:25:21] 2025-06-04 07:25:05,100 | INFO     | update_server=False
[2025-06-04 03:25:21] 2025-06-04 07:25:05,100 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:25:21] 2025-06-04 07:25:05,100 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:25:21] 2025-06-04 07:25:05,398 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:25:21] 2025-06-04 07:25:05,534 | INFO     | all data control threads have been joined
[2025-06-04 03:25:21] 2025-06-04 07:25:05,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:25:21] 2025-06-04 07:25:05,706 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:25:21] 2025-06-04 07:25:05,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:25:21] 2025-06-04 07:25:05,707 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:25:21] 2025-06-04 07:25:05,761 | INFO     | all job control threads have been joined
[2025-06-04 03:25:21] 2025-06-04 07:25:05,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:25:21] 2025-06-04 07:25:05,986 | INFO     | aborting loop
[2025-06-04 03:25:21] 2025-06-04 07:25:06,105 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:06,106 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:06,144 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:06,337 | INFO     | all payload control threads have been joined
[2025-06-04 03:25:21] 2025-06-04 07:25:06,539 | INFO     | [data] control thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:06,766 | INFO     | [job] control thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:06,797 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:06,892 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:06,992 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:07,058 | INFO     | [job] validate thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:07,343 | INFO     | [payload] control thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:07,404 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:07,426 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:07,428 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:07,447 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:09,692 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:15,174 | INFO     | job.realtimelogging is not enabled
[2025-06-04 03:25:21] 2025-06-04 07:25:16,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:25:21] 2025-06-04 07:25:16,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139717773563712)>', '<ExcThread(monitor, started 139716963858176)>']
[2025-06-04 03:25:21] 2025-06-04 07:25:16,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:25:21] 2025-06-04 07:25:16,759 | INFO     | [monitor] control thread has ended
[2025-06-04 03:25:21] 2025-06-04 07:25:21,521 | INFO     | all workflow threads have been joined
[2025-06-04 03:25:21] 2025-06-04 07:25:21,521 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:25:21] 2025-06-04 07:25:21,522 | INFO     | traces error code: 0
[2025-06-04 03:25:21] 2025-06-04 07:25:21,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:25:21] 2025-06-04 07:25:21,641 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:25:21] 2025-06-04 07:25:21,645 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:25:21] 2025-06-04 07:25:21,649 [wrapper] pilotpid: 1374
[2025-06-04 03:25:21] 2025-06-04 07:25:21,653 [wrapper] Pilot exit status: 0
[2025-06-04 03:25:21] 2025-06-04 07:25:21,671 [wrapper] pandaids: 6678217987
[2025-06-04 03:25:21] 2025-06-04 07:25:21,715 [wrapper] cleanup supervisor_pilot 21596 1375
[2025-06-04 03:25:21] 2025-06-04 07:25:21,719 [wrapper] Test setup, not cleaning
[2025-06-04 03:25:21] 2025-06-04 07:25:21,723 [wrapper] apfmon messages muted
[2025-06-04 03:25:21] 2025-06-04 07:25:21,727 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:25:21] 2025-06-04 07:25:21,732 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:25:21]  *** Error codes and diagnostics ***
[2025-06-04 03:25:21]     "exeErrorCode": 0,
[2025-06-04 03:25:21]     "exeErrorDiag": "",
[2025-06-04 03:25:21]     "pilotErrorCode": 0,
[2025-06-04 03:25:21]     "pilotErrorDiag": "",
[2025-06-04 03:25:21]  *** Listing of results directory ***
[2025-06-04 03:25:21] total 394464
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 19:58 pilot3.tar.gz
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 20:43 queuedata.json
[2025-06-04 03:25:21] -rwx------ 1 boincer umatlas     37140 Jun  3 20:45 runpilot2-wrapper.sh
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas       100 Jun  4 01:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:25:21] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 01:30 run_atlas
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas       105 Jun  4 01:30 job.xml
[2025-06-04 03:25:21] -rw-r--r-- 2 boincer umatlas 217286534 Jun  4 01:30 EVNT.45006593._001972.pool.root.1
[2025-06-04 03:25:21] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:30 start_atlas.sh
[2025-06-04 03:25:21] drwxrwx--x 2 boincer umatlas      4096 Jun  4 01:30 shared
[2025-06-04 03:25:21] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 01:30 input.tar.gz
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas         0 Jun  4 01:30 boinc_lockfile
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 01:30 pandaJob.out
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas    986745 Jun  4 01:30 agis_schedconf.cvmfs.json
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas   1603667 Jun  4 01:30 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:25:21] drwx------ 4 boincer umatlas      4096 Jun  4 01:30 pilot3
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas      5904 Jun  4 03:19 init_data.xml
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas 180905445 Jun  4 03:24 HITS.45006595._049168.pool.root.1
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas       529 Jun  4 03:24 boinc_task_state.xml
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas      1049 Jun  4 03:24 memory_monitor_summary.json
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas    325612 Jun  4 03:24 log.45006595._049168.job.log.tgz.1
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas        95 Jun  4 03:25 pilot_heartbeat.json
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas      7748 Jun  4 03:25 heartbeat.json
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 03:25 boinc_mmap_file
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas        27 Jun  4 03:25 wrapper_checkpoint.txt
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas      4425 Jun  4 03:25 pilotlog.txt
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas    629635 Jun  4 03:25 log.45006595._049168.job.log.1
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas       357 Jun  4 03:25 output.list
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas       620 Jun  4 03:25 runtime_log
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas    972800 Jun  4 03:25 result.tar.gz
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 03:25 runtime_log.err
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas       659 Jun  4 03:25 KLhNDmbRrg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4fmKDmPzTlWn.diag
[2025-06-04 03:25:21] -rw-r--r-- 1 boincer umatlas     21145 Jun  4 03:25 stderr.txt
[2025-06-04 03:25:21] HITS file was successfully produced:
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas 180905445 Jun  4 03:24 shared/HITS.pool.root.1
[2025-06-04 03:25:21]  *** Contents of shared directory: ***
[2025-06-04 03:25:21] total 390332
[2025-06-04 03:25:21] -rw-r--r-- 2 boincer umatlas 217286534 Jun  4 01:30 ATLAS.root_0
[2025-06-04 03:25:21] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:30 start_atlas.sh
[2025-06-04 03:25:21] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 01:30 input.tar.gz
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas 180905445 Jun  4 03:24 HITS.pool.root.1
[2025-06-04 03:25:21] -rw------- 1 boincer umatlas    972800 Jun  4 03:25 result.tar.gz
03:25:22 (30209): run_atlas exited; CPU time 50414.516702
03:25:22 (30209): called boinc_finish(0)

</stderr_txt>
]]>

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