Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:05:25 (4814): wrapper (7.7.26015): starting
15:05:25 (4814): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 15:05:25] Arguments: --nthreads 8
[2025-06-04 15:05:25] Threads: 8
[2025-06-04 15:05:25] Checking for CVMFS
[2025-06-04 15:05:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:05:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:05:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:05:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:05:26] 2.11.2.0 26884 33261 90356 146780 2 265 18938079 25165825 3365 130560 0 17432750 99.821 19774347 2098 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 15:05:26] CVMFS is ok
[2025-06-04 15:05:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:05:26] Checking for apptainer binary...
[2025-06-04 15:05:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:05:26] Running /usr/bin/apptainer --version
[2025-06-04 15:05:26] apptainer version 1.3.2-1.el7
[2025-06-04 15:05:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:05:28] cg-vwn403.simple-grid.lan
[2025-06-04 15:05:28] apptainer works
[2025-06-04 15:05:28] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:05:28] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:05:28] Starting ATLAS job with PandaID=6678214420
[2025-06-04 15:05:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:51:08]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:51:08] 2025-06-04 16:48:46,831 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:51:08] 2025-06-04 16:48:46,831 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:51:08] 2025-06-04 16:48:46,831 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:51:08] 2025-06-04 16:48:46,836 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:51:08] 2025-06-04 16:48:46,837 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 18:51:08] 2025-06-04 16:48:46,839 | INFO     | sum of deviations: 13591107012.999996
[2025-06-04 18:51:08] 2025-06-04 16:48:46,839 | INFO     | mean x: 1749049016.0
[2025-06-04 18:51:08] 2025-06-04 16:48:46,840 | INFO     | mean y: 2468616.9032258065
[2025-06-04 18:51:08] 2025-06-04 16:48:46,840 | INFO     | -- intersect: -7500072944.0493
[2025-06-04 18:51:08] 2025-06-04 16:48:46,840 | INFO     | intersect: -7500072944.0493
[2025-06-04 18:51:08] 2025-06-04 16:48:46,840 | INFO     | chi2: 2.5921927783195455
[2025-06-04 18:51:08] 2025-06-04 16:48:46,841 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 18:51:08] 2025-06-04 16:48:46,843 | INFO     | sum of deviations: 27451653313.499996
[2025-06-04 18:51:08] 2025-06-04 16:48:46,843 | INFO     | mean x: 1749048863.5
[2025-06-04 18:51:08] 2025-06-04 16:48:46,843 | INFO     | mean y: 2478303.0424528304
[2025-06-04 18:51:08] 2025-06-04 16:48:46,843 | INFO     | -- intersect: -16249046107.945597
[2025-06-04 18:51:08] 2025-06-04 16:48:46,843 | INFO     | intersect: -16249046107.945597
[2025-06-04 18:51:08] 2025-06-04 16:48:46,844 | INFO     | chi2: 1.8250009851505968
[2025-06-04 18:51:08] 2025-06-04 16:48:46,844 | INFO     | current chi2=1.8250009851505968 (change=29.596247608802468 %)
[2025-06-04 18:51:08] 2025-06-04 16:48:46,844 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 18:51:08] 2025-06-04 16:48:46,846 | INFO     | sum of deviations: 26750091978.00001
[2025-06-04 18:51:08] 2025-06-04 16:48:46,846 | INFO     | mean x: 1749048711.0
[2025-06-04 18:51:08] 2025-06-04 16:48:46,846 | INFO     | mean y: 2477778.888888889
[2025-06-04 18:51:08] 2025-06-04 16:48:46,846 | INFO     | -- intersect: -17009227872.27985
[2025-06-04 18:51:08] 2025-06-04 16:48:46,846 | INFO     | intersect: -17009227872.27985
[2025-06-04 18:51:08] 2025-06-04 16:48:46,847 | INFO     | chi2: 1.8263631102201239
[2025-06-04 18:51:08] 2025-06-04 16:48:46,847 | INFO     | current chi2=1.8263631102201239 (change=-0.07463694982140745 %)
[2025-06-04 18:51:08] 2025-06-04 16:48:46,847 | INFO     | right removable region: 206
[2025-06-04 18:51:08] 2025-06-04 16:48:46,848 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 18:51:08] 2025-06-04 16:48:46,849 | INFO     | sum of deviations: -25389126529.000004
[2025-06-04 18:51:08] 2025-06-04 16:48:46,850 | INFO     | mean x: 1749049168.5
[2025-06-04 18:51:08] 2025-06-04 16:48:46,850 | INFO     | mean y: 2496160.679245283
[2025-06-04 18:51:08] 2025-06-04 16:48:46,850 | INFO     | -- intersect: 15032996393.183678
[2025-06-04 18:51:08] 2025-06-04 16:48:46,850 | INFO     | intersect: 15032996393.183678
[2025-06-04 18:51:08] 2025-06-04 16:48:46,850 | INFO     | chi2: 0.8994779913585704
[2025-06-04 18:51:08] 2025-06-04 16:48:46,850 | INFO     | current chi2=0.8994779913585704 (change=65.30049775303827 %)
[2025-06-04 18:51:08] 2025-06-04 16:48:46,851 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 18:51:08] 2025-06-04 16:48:46,853 | INFO     | sum of deviations: -24290609859.0
[2025-06-04 18:51:08] 2025-06-04 16:48:46,853 | INFO     | mean x: 1749049321.0
[2025-06-04 18:51:08] 2025-06-04 16:48:46,853 | INFO     | mean y: 2495301.2125603864
[2025-06-04 18:51:08] 2025-06-04 16:48:46,853 | INFO     | -- intersect: 15450100096.934357
[2025-06-04 18:51:08] 2025-06-04 16:48:46,853 | INFO     | intersect: 15450100096.934357
[2025-06-04 18:51:08] 2025-06-04 16:48:46,854 | INFO     | chi2: 0.8857994570699156
[2025-06-04 18:51:08] 2025-06-04 16:48:46,854 | INFO     | current chi2=0.8857994570699156 (change=1.5207191749066369 %)
[2025-06-04 18:51:08] 2025-06-04 16:48:46,854 | INFO     | left removable region: 20
[2025-06-04 18:51:08] 2025-06-04 16:48:46,854 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 18:51:08] 2025-06-04 16:48:46,856 | INFO     | sum of deviations: 3652452957.999999
[2025-06-04 18:51:08] 2025-06-04 16:48:46,856 | INFO     | mean x: 1749049290.5
[2025-06-04 18:51:08] 2025-06-04 16:48:46,856 | INFO     | mean y: 2494022.795698925
[2025-06-04 18:51:08] 2025-06-04 16:48:46,856 | INFO     | -- intersect: -3199215860.5627804
[2025-06-04 18:51:08] 2025-06-04 16:48:46,856 | INFO     | intersect: -3199215860.5627804
[2025-06-04 18:51:08] 2025-06-04 16:48:46,857 | INFO     | chi2: 0.013235844832690382
[2025-06-04 18:51:08] 2025-06-04 16:48:46,857 | INFO     | -- intersect: -3199215860.5627804
[2025-06-04 18:51:08] 2025-06-04 16:48:46,857 | INFO     | current memory leak: 1.83 B/s (using 186 data points, chi2=0.01)
[2025-06-04 18:51:08] 2025-06-04 16:48:46,858 | INFO     | ..............................
[2025-06-04 18:51:08] 2025-06-04 16:48:46,858 | INFO     | . Timing measurements:
[2025-06-04 18:51:08] 2025-06-04 16:48:46,858 | INFO     | . get job = 0 s
[2025-06-04 18:51:08] 2025-06-04 16:48:46,858 | INFO     | . initial setup = 2 s
[2025-06-04 18:51:08] 2025-06-04 16:48:46,859 | INFO     | . payload setup = 17 s
[2025-06-04 18:51:08] 2025-06-04 16:48:46,859 | INFO     | . stage-in = 0 s
[2025-06-04 18:51:08] 2025-06-04 16:48:46,859 | INFO     | . payload execution = 13234 s
[2025-06-04 18:51:08] 2025-06-04 16:48:46,859 | INFO     | . stage-out = 3 s
[2025-06-04 18:51:08] 2025-06-04 16:48:46,859 | INFO     | . log creation = 0 s
[2025-06-04 18:51:08] 2025-06-04 16:48:46,859 | INFO     | ..............................
[2025-06-04 18:51:08] 2025-06-04 16:48:47,037 | INFO     | 
[2025-06-04 18:51:08] 2025-06-04 16:48:47,037 | INFO     | job summary report
[2025-06-04 18:51:08] 2025-06-04 16:48:47,037 | INFO     | --------------------------------------------------
[2025-06-04 18:51:08] 2025-06-04 16:48:47,037 | INFO     | PanDA job id: 6678214420
[2025-06-04 18:51:08] 2025-06-04 16:48:47,037 | INFO     | task id: 45006595
[2025-06-04 18:51:08] 2025-06-04 16:48:47,037 | INFO     | errors: (none)
[2025-06-04 18:51:08] 2025-06-04 16:48:47,037 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:51:08] 2025-06-04 16:48:47,038 | INFO     | pilot state: finished 
[2025-06-04 18:51:08] 2025-06-04 16:48:47,038 | INFO     | transexitcode: 0
[2025-06-04 18:51:08] 2025-06-04 16:48:47,038 | INFO     | exeerrorcode: 0
[2025-06-04 18:51:08] 2025-06-04 16:48:47,038 | INFO     | exeerrordiag: 
[2025-06-04 18:51:08] 2025-06-04 16:48:47,038 | INFO     | exitcode: 0
[2025-06-04 18:51:08] 2025-06-04 16:48:47,038 | INFO     | exitmsg: OK
[2025-06-04 18:51:08] 2025-06-04 16:48:47,038 | INFO     | cpuconsumptiontime: 49659 s
[2025-06-04 18:51:08] 2025-06-04 16:48:47,038 | INFO     | nevents: 400
[2025-06-04 18:51:08] 2025-06-04 16:48:47,038 | INFO     | neventsw: 0
[2025-06-04 18:51:08] 2025-06-04 16:48:47,038 | INFO     | pid: 19288
[2025-06-04 18:51:08] 2025-06-04 16:48:47,038 | INFO     | pgrp: 19288
[2025-06-04 18:51:08] 2025-06-04 16:48:47,038 | INFO     | corecount: 8
[2025-06-04 18:51:08] 2025-06-04 16:48:47,039 | INFO     | event service: False
[2025-06-04 18:51:08] 2025-06-04 16:48:47,039 | INFO     | sizes: {0: 2397115, 1: 2397370, 2: 2397370, 12: 2397632, 13255: 2427184, 13256: 2427183, 13260: 2436308, 13262: 2436364, 13353: 2436534}
[2025-06-04 18:51:08] 2025-06-04 16:48:47,039 | INFO     | --------------------------------------------------
[2025-06-04 18:51:08] 2025-06-04 16:48:47,039 | INFO     | 
[2025-06-04 18:51:08] 2025-06-04 16:48:47,039 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-06-04 18:51:08] 2025-06-04 16:48:47,565 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,566 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,566 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,566 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,566 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,566 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,566 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,566 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,566 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,566 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,567 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,567 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,567 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:51:08] 2025-06-04 16:48:47,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,568 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:51:08] 2025-06-04 16:48:47,568 | INFO     | job 6678214420 has completed (purged errors)
[2025-06-04 18:51:08] 2025-06-04 16:48:47,568 | INFO     | overall cleanup function is called
[2025-06-04 18:51:08] 2025-06-04 16:48:48,580 | INFO     | --- collectZombieJob: --- 10, [19288]
[2025-06-04 18:51:08] 2025-06-04 16:48:48,580 | INFO     | zombie collector waiting for pid 19288
[2025-06-04 18:51:08] 2025-06-04 16:48:48,580 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:51:08] 2025-06-04 16:48:48,580 | INFO     | collected zombie processes
[2025-06-04 18:51:08] 2025-06-04 16:48:48,580 | INFO     | will attempt to kill all subprocesses of pid=19288
[2025-06-04 18:51:08] 2025-06-04 16:48:48,727 | INFO     | process IDs to be killed: [19288] (in reverse order)
[2025-06-04 18:51:08] 2025-06-04 16:48:49,553 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:51:08] 2025-06-04 16:48:49,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:51:08] 2025-06-04 16:48:49,557 | INFO     | did not find any defunct processes belonging to 19288
[2025-06-04 18:51:08] 2025-06-04 16:48:49,561 | INFO     | did not find any defunct processes belonging to 19288
[2025-06-04 18:51:08] 2025-06-04 16:48:49,561 | INFO     | ready for new job
[2025-06-04 18:51:08] 2025-06-04 16:48:49,561 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:51:08] 2025-06-04 16:48:49,563 | INFO     | **************************************
[2025-06-04 18:51:08] 2025-06-04 16:48:49,563 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:51:08] 2025-06-04 16:48:49,564 | INFO     | **************************************
[2025-06-04 18:51:08] 2025-06-04 16:48:49,564 | INFO     | 
[2025-06-04 18:51:08] 2025-06-04 16:48:49,564 | INFO     | pilot is running in a VM
[2025-06-04 18:51:08] 2025-06-04 16:48:49,564 | INFO     | architecture information:
[2025-06-04 18:51:08] 2025-06-04 16:48:49,582 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:51:08] 2025-06-04 16:48:49,808 | INFO     | cat /etc/os-release:
[2025-06-04 18:51:08] NAME="CentOS Linux"
[2025-06-04 18:51:08] VERSION="7 (Core)"
[2025-06-04 18:51:08] ID="centos"
[2025-06-04 18:51:08] ID_LIKE="rhel fedora"
[2025-06-04 18:51:08] VERSION_ID="7"
[2025-06-04 18:51:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:51:08] ANSI_COLOR="0;31"
[2025-06-04 18:51:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:51:08] HOME_URL="https://www.centos.org/"
[2025-06-04 18:51:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:51:08] 
[2025-06-04 18:51:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:51:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:51:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:51:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:51:08] 
[2025-06-04 18:51:08] 2025-06-04 16:48:49,809 | INFO     | **************************************
[2025-06-04 18:51:08] 2025-06-04 16:48:50,312 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-06-04 18:51:08] 2025-06-04 16:48:50,580 | INFO     | sufficient remaining disk space (496807968768 B)
[2025-06-04 18:51:08] 2025-06-04 16:48:50,581 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:51:08] 2025-06-04 16:48:50,581 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:51:08] 2025-06-04 16:48:50,581 | INFO     | update_server=False
[2025-06-04 18:51:08] 2025-06-04 16:48:50,581 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:51:08] 2025-06-04 16:48:50,582 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:51:08] 2025-06-04 16:48:50,956 | INFO     | PID=10457 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 18:51:08] 2025-06-04 16:48:50,956 | INFO     | .. there are 9 such processes running
[2025-06-04 18:51:08] 2025-06-04 16:48:50,956 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:51:08] 2025-06-04 16:48:50,957 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:51:08] 2025-06-04 16:48:50,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:51:08] 2025-06-04 16:48:51,079 | INFO     | all data control threads have been joined
[2025-06-04 18:51:08] 2025-06-04 16:48:51,085 | INFO     | all payload control threads have been joined
[2025-06-04 18:51:08] 2025-06-04 16:48:51,147 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:51:08] 2025-06-04 16:48:51,147 | INFO     | aborting loop
[2025-06-04 18:51:08] 2025-06-04 16:48:51,587 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:51,621 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:51,677 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:51,685 | INFO     | [job] validate thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:51,869 | INFO     | all job control threads have been joined
[2025-06-04 18:51:08] 2025-06-04 16:48:51,993 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:52,051 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:51:08] 2025-06-04 16:48:52,084 | INFO     | [data] control thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:52,091 | INFO     | [payload] control thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:52,153 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:52,409 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:52,589 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:52,667 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:51:08] 2025-06-04 16:48:52,821 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:52,875 | INFO     | [job] control thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:52,971 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:53,056 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:48:56,675 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:49:01,040 | INFO     | job.realtimelogging is not enabled
[2025-06-04 18:51:08] 2025-06-04 16:49:02,047 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:51:08] 2025-06-04 16:49:02,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660773017408)>', '<ExcThread(monitor, started 139660483340032)>']
[2025-06-04 18:51:08] 2025-06-04 16:49:03,028 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:51:08] 2025-06-04 16:49:03,028 | INFO     | [monitor] control thread has ended
[2025-06-04 18:51:08] 2025-06-04 16:49:07,802 | INFO     | all workflow threads have been joined
[2025-06-04 18:51:08] 2025-06-04 16:49:07,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:51:08] 2025-06-04 16:49:07,802 | INFO     | traces error code: 0
[2025-06-04 18:51:08] 2025-06-04 16:49:07,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:51:08] 2025-06-04 16:49:08,179 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:51:08] 2025-06-04 16:49:08,195 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:51:08] 2025-06-04 16:49:08,215 [wrapper] pilotpid: 10457
[2025-06-04 18:51:08] 2025-06-04 16:49:08,308 [wrapper] Pilot exit status: 0
[2025-06-04 18:51:08] 2025-06-04 16:49:08,634 [wrapper] pandaids: 6678214420
[2025-06-04 18:51:08] 2025-06-04 16:49:09,303 [wrapper] cleanup supervisor_pilot  8889 10458
[2025-06-04 18:51:08] 2025-06-04 16:49:09,413 [wrapper] Test setup, not cleaning
[2025-06-04 18:51:08] 2025-06-04 16:49:09,451 [wrapper] apfmon messages muted
[2025-06-04 18:51:08] 2025-06-04 16:49:09,500 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:51:08] 2025-06-04 16:49:09,601 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:51:08]  *** Error codes and diagnostics ***
[2025-06-04 18:51:08]     "exeErrorCode": 0,
[2025-06-04 18:51:08]     "exeErrorDiag": "",
[2025-06-04 18:51:08]     "pilotErrorCode": 0,
[2025-06-04 18:51:08]     "pilotErrorDiag": "",
[2025-06-04 18:51:08]  *** Listing of results directory ***
[2025-06-04 18:51:08] total 390552
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc      5111 Jun  4 02:36 queuedata.json
[2025-06-04 18:51:08] -rwx------. 1 boinc boinc     37140 Jun  4 02:36 runpilot2-wrapper.sh
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc       100 Jun  4 15:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:51:08] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 15:05 run_atlas
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc       105 Jun  4 15:05 job.xml
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc      6392 Jun  4 15:05 init_data.xml
[2025-06-04 18:51:08] -rw-r--r--. 2 boinc boinc 216197373 Jun  4 15:05 EVNT.45006593._001963.pool.root.1
[2025-06-04 18:51:08] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:05 start_atlas.sh
[2025-06-04 18:51:08] drwxrwx--x. 2 boinc boinc        68 Jun  4 15:05 shared
[2025-06-04 18:51:08] -rw-r--r--. 2 boinc boinc    508882 Jun  4 15:05 input.tar.gz
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc         0 Jun  4 15:05 boinc_lockfile
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc      2525 Jun  4 15:05 pandaJob.out
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc    986811 Jun  4 15:05 agis_schedconf.cvmfs.json
[2025-06-04 18:51:08] drwx------. 4 boinc boinc      4096 Jun  4 15:05 pilot3
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc 176837604 Jun  4 18:45 HITS.45006595._048935.pool.root.1
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc       531 Jun  4 18:46 boinc_task_state.xml
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc      1018 Jun  4 18:47 memory_monitor_summary.json
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc   1598969 Jun  4 18:47 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc    372023 Jun  4 18:47 log.45006595._048935.job.log.tgz.1
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc        95 Jun  4 18:48 pilot_heartbeat.json
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc      7702 Jun  4 18:48 heartbeat.json
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc      4880 Jun  4 18:49 pilotlog.txt
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc   1163424 Jun  4 18:49 log.45006595._048935.job.log.1
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc       357 Jun  4 18:49 output.list
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc       620 Jun  4 18:49 runtime_log
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc   1556480 Jun  4 18:49 result.tar.gz
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc      8659 Jun  4 18:49 runtime_log.err
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc       656 Jun  4 18:49 GhINDmcIrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrMaKDmHUeBGn.diag
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc      8192 Jun  4 18:51 boinc_mmap_file
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc        28 Jun  4 18:51 wrapper_checkpoint.txt
[2025-06-04 18:51:08] -rw-r--r--. 1 boinc boinc     20560 Jun  4 18:51 stderr.txt
[2025-06-04 18:51:08] HITS file was successfully produced:
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc 176837604 Jun  4 18:45 shared/HITS.pool.root.1
[2025-06-04 18:51:08]  *** Contents of shared directory: ***
[2025-06-04 18:51:08] total 385864
[2025-06-04 18:51:08] -rw-r--r--. 2 boinc boinc 216197373 Jun  4 15:05 ATLAS.root_0
[2025-06-04 18:51:08] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:05 start_atlas.sh
[2025-06-04 18:51:08] -rw-r--r--. 2 boinc boinc    508882 Jun  4 15:05 input.tar.gz
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc 176837604 Jun  4 18:45 HITS.pool.root.1
[2025-06-04 18:51:08] -rw-------. 1 boinc boinc   1556480 Jun  4 18:49 result.tar.gz
18:51:10 (4814): run_atlas exited; CPU time 49835.855422
18:51:10 (4814): called boinc_finish(0)

</stderr_txt>
]]>

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