Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 10:43:45 (1752): Detected: vboxwrapper 26206
2025-06-04 10:43:45 (1752): Detected: BOINC client v8.0.2
2025-06-04 10:43:46 (1752): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-04 10:43:46 (1752): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 10:43:47 (1752): Create VM. (boinc_07784b9c01937025, slot#1)
2025-06-04 10:43:47 (1752): Setting Memory Size for VM. (4800MB)
2025-06-04 10:43:47 (1752): Setting CPU Count for VM. (8)
2025-06-04 10:43:48 (1752): Setting Chipset Options for VM.
2025-06-04 10:43:48 (1752): Setting Graphics Controller Options for VM.
2025-06-04 10:43:48 (1752): Setting Boot Options for VM.
2025-06-04 10:43:49 (1752): Setting Network Configuration for NAT.
2025-06-04 10:43:49 (1752): Enabling VM Network Access.
2025-06-04 10:43:49 (1752): Disabling USB Support for VM.
2025-06-04 10:43:49 (1752): Disabling COM Port Support for VM.
2025-06-04 10:43:50 (1752): Disabling LPT Port Support for VM.
2025-06-04 10:43:50 (1752): Disabling Audio Support for VM.
2025-06-04 10:43:50 (1752): Disabling Clipboard Support for VM.
2025-06-04 10:43:50 (1752): Disabling Drag and Drop Support for VM.
2025-06-04 10:43:51 (1752): Adding storage controller(s) to VM.
2025-06-04 10:43:51 (1752): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 10:43:51 (1752): Adding VirtualBox Guest Additions to VM.
2025-06-04 10:43:52 (1752): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 10:43:52 (1752): forwarding host port 55117 to guest port 80
2025-06-04 10:43:52 (1752): Enabling remote desktop for VM.
2025-06-04 10:43:52 (1752): Required extension pack not installed, remote desktop not enabled.
2025-06-04 10:43:52 (1752): Enabling shared directory for VM.
2025-06-04 10:43:53 (1752): Starting VM using VBoxManage interface. (boinc_07784b9c01937025, slot#1)
2025-06-04 10:43:59 (1752): Successfully started VM. (PID = '10268')
2025-06-04 10:43:59 (1752): Reporting VM Process ID to BOINC.
2025-06-04 10:43:59 (1752): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-04 10:43:59 (1752): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 10:43:59 (1752): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 10:43:59 (1752): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 10:43:59 (1752): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 10:43:59 (1752): Detected: Web Application Enabled (http://localhost:55117)
2025-06-04 10:43:59 (1752): Preference change detected
2025-06-04 10:43:59 (1752): Setting CPU throttle for VM. (100%)
2025-06-04 10:43:59 (1752): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 10:44:01 (1752): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 10:44:01 (1752): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 10:44:04 (1752): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 10:44:04 (1752): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 10:44:04 (1752): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 10:44:13 (1752): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 10:44:13 (1752): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 10:44:25 (1752): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 10:44:25 (1752): Guest Log: 00:00:00.000271 main     Log opened 2025-06-04T10:44:23.068581000Z
2025-06-04 10:44:25 (1752): Guest Log: 00:00:00.000457 main     OS Product: Linux
2025-06-04 10:44:25 (1752): Guest Log: 00:00:00.000599 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 10:44:25 (1752): Guest Log: 00:00:00.000667 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 10:44:25 (1752): Guest Log: 00:00:00.000736 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 10:44:25 (1752): Guest Log: 00:00:00.000739 main     Process ID: 1375
2025-06-04 10:44:25 (1752): Guest Log: 00:00:00.000741 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 10:44:25 (1752): Guest Log: 00:00:00.002390 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 10:44:25 (1752): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 10:44:25 (1752): Guest Log: [INFO] Mounting shared directory
2025-06-04 10:44:25 (1752): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 10:44:35 (1752): Guest Log: 00:00:10.061922 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 787 807 879 000ns (GuestNow=1 749 023 075 266 646 000 ns GuestLast=1 749 033 863 074 525 000 ns fSetTimeLastLoop=true )
2025-06-04 10:44:46 (1752): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 10:44:46 (1752): Guest Log: [INFO] Detected branch: prod
2025-06-04 10:44:46 (1752): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 10:44:46 (1752): Guest Log: Copying input files
2025-06-04 10:44:48 (1752): Guest Log: Copied input files into RunAtlas.
2025-06-04 10:44:48 (1752): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 10:44:48 (1752): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 10:44:48 (1752): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 10:44:48 (1752): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 10:44:59 (1752): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 10:44:59 (1752): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 10:44:59 (1752): Guest Log: 2.6.3.0 1659 0 32032 146772 3 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 10:45:00 (1752): Guest Log: copied the webapp to /var/www
2025-06-04 10:45:00 (1752): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 10:45:00 (1752): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 10:45:01 (1752): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 10:45:01 (1752): Guest Log:  *** Starting ATLAS job. (PandaID=6678214450 taskID=45006595) ***
2025-06-04 12:24:04 (1752): Status Report: Elapsed Time: '6000.000000'
2025-06-04 12:24:04 (1752): Status Report: CPU Time: '39507.390625'
2025-06-04 14:04:08 (1752): Status Report: Elapsed Time: '12000.000000'
2025-06-04 14:04:08 (1752): Status Report: CPU Time: '87157.453125'
2025-06-04 14:31:18 (1752): Guest Log:  *** Job finished ***
2025-06-04 14:31:18 (1752): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:30:56,582 | INFO     | all workflow threads have been joined
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:30:56,583 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:30:56,583 | INFO     | traces error code: 0
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:30:56,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:15,813 | INFO     | PID=6019 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:15,816 | INFO     | found 0 job(s) in 20 queues
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:15,816 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:15,816 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:15,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:15,817 | INFO     | [monitor] control thread has ended
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:15,979 [wrapper] ==== pilot stdout END ====
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:15,986 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:15,993 [wrapper] pilotpid: 6019
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:16,000 [wrapper] Pilot exit status: 0
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:16,111 [wrapper] pandaids: 6678214450
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:16,165 [wrapper] cleanup supervisor_pilot 11705 6020
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:16,175 [wrapper] Test setup, not cleaning
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:16,184 [wrapper] apfmon messages muted
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:16,192 [wrapper] ==== wrapper stdout END ====
2025-06-04 14:31:18 (1752): Guest Log: 2025-06-04 11:31:16,200 [wrapper] ==== wrapper stderr END ====
2025-06-04 14:31:18 (1752): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 14:31:18 (1752): Guest Log:     "exeErrorCode": 0,
2025-06-04 14:31:18 (1752): Guest Log:     "exeErrorDiag": "",
2025-06-04 14:31:18 (1752): Guest Log:     "pilotErrorCode": 0,
2025-06-04 14:31:18 (1752): Guest Log:     "pilotErrorDiag": "",
2025-06-04 14:31:18 (1752): Guest Log:  *** Listing of results directory ***
2025-06-04 14:31:18 (1752): Guest Log: total 180648
2025-06-04 14:31:18 (1752): Guest Log: -rw-r--r--. 1 atlas atlas    549845 Jun  2 09:40 pilot3.tar.gz
2025-06-04 14:31:18 (1752): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  4 00:36 queuedata.json
2025-06-04 14:31:18 (1752): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  4 00:36 runpilot2-wrapper.sh
2025-06-04 14:31:18 (1752): Guest Log: -rwxr-xr-x. 1 atlas atlas      6206 Jun  4 07:44 init_data.xml
2025-06-04 14:31:18 (1752): Guest Log: -rwxr-xr-x. 1 atlas atlas    564113 Jun  4 07:44 input.tar.gz
2025-06-04 14:31:18 (1752): Guest Log: -rwxr-xr-x. 1 atlas atlas     15093 Jun  4 07:44 start_atlas.sh
2025-06-04 14:31:18 (1752): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 07:44 EVNT.45006593._001964.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 14:31:18 (1752): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  4 07:45 pandaJob.out
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas    986745 Jun  4 07:46 agis_schedconf.cvmfs.json
2025-06-04 14:31:18 (1752): Guest Log: drwx------. 6 atlas atlas      4096 Jun  4 07:46 pilot3
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas 178189346 Jun  4 11:29 HITS.45006595._048965.pool.root.1
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas      1033 Jun  4 11:30 memory_monitor_summary.json
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas   1598969 Jun  4 11:30 agis_ddmendpoints.agis.ALL.json
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas    376097 Jun  4 11:30 log.45006595._048965.job.log.tgz.1
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas      7725 Jun  4 11:30 heartbeat.json
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas        95 Jun  4 11:31 pilot_heartbeat.json
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas       744 Jun  4 11:31 pilotlog.txt
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas   1090821 Jun  4 11:31 log.45006595._048965.job.log.1
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 11:31 output.list
2025-06-04 14:31:18 (1752): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 11:31 runtime_log
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas   1484800 Jun  4 11:31 result.tar.gz
2025-06-04 14:31:18 (1752): Guest Log: -rw-r--r--. 1 atlas atlas      8598 Jun  4 11:31 runtime_log.err
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas       662 Jun  4 11:31 OmxNDmcIrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmDNaKDmFoJyZm.diag
2025-06-04 14:31:18 (1752): Guest Log: Looking for outputfile HITS.45006595._048965.pool.root.1
2025-06-04 14:31:18 (1752): Guest Log: HITS file was successfully produced
2025-06-04 14:31:18 (1752): Guest Log: -rw-------. 1 atlas atlas 178189346 Jun  4 11:29 /home/atlas/RunAtlas/HITS.45006595._048965.pool.root.1
2025-06-04 14:31:20 (1752): Guest Log: Successfully finished the ATLAS job!
2025-06-04 14:31:20 (1752): Guest Log: Copying the results back to the shared directory!
2025-06-04 14:31:20 (1752): Guest Log:  *** Contents of shared directory: ***
2025-06-04 14:31:20 (1752): Guest Log: total 386304
2025-06-04 14:31:20 (1752): Guest Log: -rwxrwxrwx. 1 root root 215305550 Jun  4 07:43 ATLAS.root_0
2025-06-04 14:31:20 (1752): Guest Log: -rwxrwxrwx. 1 root root 178189346 Jun  4 11:31 HITS.pool.root.1
2025-06-04 14:31:20 (1752): Guest Log: -rwxrwxrwx. 1 root root      6206 Jun  4 07:43 init_data.xml
2025-06-04 14:31:20 (1752): Guest Log: -rwxrwxrwx. 1 root root    564113 Jun  4 05:20 input.tar.gz
2025-06-04 14:31:20 (1752): Guest Log: -rwxrwxrwx. 1 root root   1484800 Jun  4 11:31 result.tar.gz
2025-06-04 14:31:20 (1752): Guest Log: -rwxrwxrwx. 1 root root     15093 Jun  4 05:20 start_atlas.sh
2025-06-04 14:31:20 (1752): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 14:31:20 (1752): VM Completion File Detected.
2025-06-04 14:31:20 (1752): Powering off VM.
2025-06-04 14:31:21 (1752): Successfully stopped VM.
2025-06-04 14:31:21 (1752): Deregistering VM. (boinc_07784b9c01937025, slot#1)
2025-06-04 14:31:21 (1752): Removing network bandwidth throttle group from VM.
2025-06-04 14:31:21 (1752): Removing VM from VirtualBox.
14:31:26 (1752): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN