Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:23:29 (967): wrapper (7.7.26015): starting
01:23:29 (967): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 01:23:29] Arguments: --nthreads 4
[2025-06-04 01:23:29] Threads: 4
[2025-06-04 01:23:29] Checking for CVMFS
[2025-06-04 01:23:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:23:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:23:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:23:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:23:29] 2.11.2.0 26179 449315 88076 146769 0 56 11252626 20275201 1 130560 0 45849865 99.985 19383074 18820 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 01:23:29] CVMFS is ok
[2025-06-04 01:23:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:23:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:23:29] Further information can be found at the LHC@home message board.
[2025-06-04 01:23:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:23:29] Checking for apptainer binary...
[2025-06-04 01:23:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:23:29] Running /usr/bin/apptainer --version
[2025-06-04 01:23:29] apptainer version 1.3.2-1.el7
[2025-06-04 01:23:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:23:30] c-205-33.aglt2.org
[2025-06-04 01:23:30] apptainer works
[2025-06-04 01:23:30] Set ATHENA_PROC_NUMBER=4
[2025-06-04 01:23:30] Set ATHENA_CORE_NUMBER=4
[2025-06-04 01:23:30] Starting ATLAS job with PandaID=6678215878
[2025-06-04 01:23:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:53:31]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:53:31]  filetype=log
[2025-06-04 02:53:31]  guid=498901bc-55d1-4b68-a515-0e37561a3f14
[2025-06-04 02:53:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 02:53:31]  is_altstaged=None
[2025-06-04 02:53:31]  is_tar=False
[2025-06-04 02:53:31]  lfn=log.45006595._049100.job.log.tgz.1
[2025-06-04 02:53:31]  mtime=0
[2025-06-04 02:53:31]  protocol_id=None
[2025-06-04 02:53:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 02:53:31]  replicas=None
[2025-06-04 02:53:31]  scope=mc23_13p6TeV
[2025-06-04 02:53:31]  status=None
[2025-06-04 02:53:31]  status_code=0
[2025-06-04 02:53:31]  storage_token=
[2025-06-04 02:53:31]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678215878/log.45006595._049100.job.log.tgz.1
[2025-06-04 02:53:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/b8/log.45006595._049100.job.log.tgz.1
[2025-06-04 02:53:31]  workdir=None
[2025-06-04 02:53:31] ]
[2025-06-04 02:53:31] 2025-06-04 06:53:06,570 | INFO     | transferring file log.45006595._049100.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678215878/log.45006595._049100.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:53:31] 2025-06-04 06:53:06,570 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678215878/log.45006595._049100.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._049100.job
[2025-06-04 02:53:31] 2025-06-04 06:53:06,581 | INFO     | adding to output.list: log.45006595._049100.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/39/b8/log.45006595._049100.job.log.tg
[2025-06-04 02:53:31] 2025-06-04 06:53:06,582 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:53:31] 2025-06-04 06:53:06,582 | INFO     | summary of transferred files:
[2025-06-04 02:53:31] 2025-06-04 06:53:06,582 | INFO     |  -- lfn=log.45006595._049100.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:53:31] 2025-06-04 06:53:06,582 | INFO     | stage-out finished correctly
[2025-06-04 02:53:31] 2025-06-04 06:53:07,748 | INFO     | monitor loop #406: job 0:6678215878 is in state 'finished'
[2025-06-04 02:53:31] 2025-06-04 06:53:07,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:53:31] 2025-06-04 06:53:09,463 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:53:31] 2025-06-04 06:53:09,648 | INFO     | job 6678215878 has state=finished
[2025-06-04 02:53:31] 2025-06-04 06:53:09,648 | INFO     | preparing for final server update for job 6678215878 in state='finished'
[2025-06-04 02:53:31] 2025-06-04 06:53:09,649 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:53:31] 2025-06-04 06:53:09,649 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:53:31] 2025-06-04 06:53:09,650 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:53:31] 2025-06-04 06:53:09,650 | INFO     | job 6678215878 has finished - writing final server update
[2025-06-04 02:53:31] 2025-06-04 06:53:09,650 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:53:31] 2025-06-04 06:53:09,652 | INFO     | executing command: lscpu
[2025-06-04 02:53:31] 2025-06-04 06:53:09,678 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:53:31] 2025-06-04 06:53:10,251 | INFO     | monitor loop #407: job 0:6678215878 is in state 'finished'
[2025-06-04 02:53:31] 2025-06-04 06:53:10,251 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:53:31] 2025-06-04 06:53:12,413 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 02:53:31] 2025-06-04 06:53:12,413 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678215878/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:53:31] 2025-06-04 06:53:12,413 | INFO     | extracted standard info from prmon json
[2025-06-04 02:53:31] 2025-06-04 06:53:12,413 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:53:31] 2025-06-04 06:53:12,413 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:53:31] 2025-06-04 06:53:12,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:53:31] 2025-06-04 06:53:12,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:53:31] 2025-06-04 06:53:12,414 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:53:31] 2025-06-04 06:53:12,415 | INFO     | sum of square deviations: 164765880.0
[2025-06-04 02:53:31] 2025-06-04 06:53:12,415 | INFO     | sum of deviations: -14085672260.0
[2025-06-04 02:53:31] 2025-06-04 06:53:12,415 | INFO     | mean x: 1749017384.0
[2025-06-04 02:53:31] 2025-06-04 06:53:12,415 | INFO     | mean y: 2459470.407407407
[2025-06-04 02:53:31] 2025-06-04 06:53:12,415 | INFO     | -- intersect: 149524227254.287
[2025-06-04 02:53:31] 2025-06-04 06:53:12,415 | INFO     | intersect: 149524227254.287
[2025-06-04 02:53:31] 2025-06-04 06:53:12,415 | INFO     | chi2: 0.07777626378305126
[2025-06-04 02:53:31] 2025-06-04 06:53:12,415 | INFO     | -- intersect: 149524227254.287
[2025-06-04 02:53:31] 2025-06-04 06:53:12,415 | INFO     | current memory leak: -85.49 B/s (using 81 data points, chi2=0.08)
[2025-06-04 02:53:31] 2025-06-04 06:53:12,415 | INFO     | ..............................
[2025-06-04 02:53:31] 2025-06-04 06:53:12,416 | INFO     | . Timing measurements:
[2025-06-04 02:53:31] 2025-06-04 06:53:12,416 | INFO     | . get job = 0 s
[2025-06-04 02:53:31] 2025-06-04 06:53:12,416 | INFO     | . initial setup = 2 s
[2025-06-04 02:53:31] 2025-06-04 06:53:12,416 | INFO     | . payload setup = 4 s
[2025-06-04 02:53:31] 2025-06-04 06:53:12,416 | INFO     | . stage-in = 0 s
[2025-06-04 02:53:31] 2025-06-04 06:53:12,416 | INFO     | . payload execution = 5347 s
[2025-06-04 02:53:31] 2025-06-04 06:53:12,416 | INFO     | . stage-out = 0 s
[2025-06-04 02:53:31] 2025-06-04 06:53:12,416 | INFO     | . log creation = 0 s
[2025-06-04 02:53:31] 2025-06-04 06:53:12,416 | INFO     | ..............................
[2025-06-04 02:53:31] 2025-06-04 06:53:12,454 | INFO     | 
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | job summary report
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | --------------------------------------------------
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | PanDA job id: 6678215878
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | task id: 45006595
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | errors: (none)
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | pilot state: finished 
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | transexitcode: 0
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | exeerrorcode: 0
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | exeerrordiag: 
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | exitcode: 0
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | exitmsg: OK
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | cpuconsumptiontime: 20769 s
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | nevents: 400
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | neventsw: 0
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | pid: 11078
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | pgrp: 11078
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | corecount: 4
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | event service: False
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 5354: 2431929, 5355: 2440870, 5358: 2440926, 5361: 2441224}
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | --------------------------------------------------
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | 
[2025-06-04 02:53:31] 2025-06-04 06:53:12,455 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,468 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:53:31] 2025-06-04 06:53:12,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,468 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:53:31] 2025-06-04 06:53:12,468 | INFO     | job 6678215878 has completed (purged errors)
[2025-06-04 02:53:31] 2025-06-04 06:53:12,468 | INFO     | overall cleanup function is called
[2025-06-04 02:53:31] 2025-06-04 06:53:13,474 | INFO     | --- collectZombieJob: --- 10, [11078]
[2025-06-04 02:53:31] 2025-06-04 06:53:13,474 | INFO     | zombie collector waiting for pid 11078
[2025-06-04 02:53:31] 2025-06-04 06:53:13,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:53:31] 2025-06-04 06:53:13,475 | INFO     | collected zombie processes
[2025-06-04 02:53:31] 2025-06-04 06:53:13,475 | INFO     | will attempt to kill all subprocesses of pid=11078
[2025-06-04 02:53:31] 2025-06-04 06:53:13,508 | INFO     | process IDs to be killed: [11078] (in reverse order)
[2025-06-04 02:53:31] 2025-06-04 06:53:13,530 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:53:31] 2025-06-04 06:53:13,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:53:31] 2025-06-04 06:53:13,531 | INFO     | did not find any defunct processes belonging to 11078
[2025-06-04 02:53:31] 2025-06-04 06:53:13,532 | INFO     | did not find any defunct processes belonging to 11078
[2025-06-04 02:53:31] 2025-06-04 06:53:13,532 | INFO     | ready for new job
[2025-06-04 02:53:31] 2025-06-04 06:53:13,532 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:53:31] 2025-06-04 06:53:13,533 | INFO     | **************************************
[2025-06-04 02:53:31] 2025-06-04 06:53:13,533 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:53:31] 2025-06-04 06:53:13,533 | INFO     | **************************************
[2025-06-04 02:53:31] 2025-06-04 06:53:13,533 | INFO     | 
[2025-06-04 02:53:31] 2025-06-04 06:53:13,533 | INFO     | architecture information:
[2025-06-04 02:53:31] 2025-06-04 06:53:13,533 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:53:31] 2025-06-04 06:53:13,541 | INFO     | cat /etc/os-release:
[2025-06-04 02:53:31] NAME="CentOS Linux"
[2025-06-04 02:53:31] VERSION="7 (Core)"
[2025-06-04 02:53:31] ID="centos"
[2025-06-04 02:53:31] ID_LIKE="rhel fedora"
[2025-06-04 02:53:31] VERSION_ID="7"
[2025-06-04 02:53:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:53:31] ANSI_COLOR="0;31"
[2025-06-04 02:53:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:53:31] HOME_URL="https://www.centos.org/"
[2025-06-04 02:53:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:53:31] 
[2025-06-04 02:53:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:53:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:53:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:53:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:53:31] 
[2025-06-04 02:53:31] 2025-06-04 06:53:13,541 | INFO     | **************************************
[2025-06-04 02:53:31] 2025-06-04 06:53:14,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:53:31] 2025-06-04 06:53:14,067 | INFO     | sufficient remaining disk space (18648924160 B)
[2025-06-04 02:53:31] 2025-06-04 06:53:14,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:53:31] 2025-06-04 06:53:14,068 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:53:31] 2025-06-04 06:53:14,068 | INFO     | update_server=False
[2025-06-04 02:53:31] 2025-06-04 06:53:14,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:53:31] 2025-06-04 06:53:14,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:53:31] 2025-06-04 06:53:14,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:53:31] 2025-06-04 06:53:14,070 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 02:53:31] 2025-06-04 06:53:14,070 | INFO     | aborting loop
[2025-06-04 02:53:31] 2025-06-04 06:53:14,071 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:53:31] 2025-06-04 06:53:14,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:53:31] 2025-06-04 06:53:14,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:53:31] 2025-06-04 06:53:14,503 | INFO     | all data control threads have been joined
[2025-06-04 02:53:31] 2025-06-04 06:53:14,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:53:31] 2025-06-04 06:53:14,802 | INFO     | all payload control threads have been joined
[2025-06-04 02:53:31] 2025-06-04 06:53:15,070 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:15,072 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:15,075 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:15,084 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:15,263 | INFO     | all job control threads have been joined
[2025-06-04 02:53:31] 2025-06-04 06:53:15,437 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:15,503 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:53:31] 2025-06-04 06:53:15,508 | INFO     | [data] control thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:15,671 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:15,746 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:15,746 | INFO     | [job] validate thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:15,806 | INFO     | [payload] control thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:16,052 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:16,129 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:16,269 | INFO     | [job] control thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:16,634 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:19,505 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:24,781 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:53:31] 2025-06-04 06:53:25,786 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:53:31] 2025-06-04 06:53:26,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140523216635712)>', '<ExcThread(monitor, started 140522404443904)>']
[2025-06-04 02:53:31] 2025-06-04 06:53:27,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:53:31] 2025-06-04 06:53:27,134 | INFO     | [monitor] control thread has ended
[2025-06-04 02:53:31] 2025-06-04 06:53:31,809 | INFO     | all workflow threads have been joined
[2025-06-04 02:53:31] 2025-06-04 06:53:31,809 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:53:31] 2025-06-04 06:53:31,810 | INFO     | traces error code: 0
[2025-06-04 02:53:31] 2025-06-04 06:53:31,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:53:31] 2025-06-04 06:53:31,874 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:53:31] 2025-06-04 06:53:31,876 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:53:31] 2025-06-04 06:53:31,878 [wrapper] pilotpid: 4656
[2025-06-04 02:53:31] 2025-06-04 06:53:31,880 [wrapper] Pilot exit status: 0
[2025-06-04 02:53:31] 2025-06-04 06:53:31,886 [wrapper] pandaids: 6678215878
[2025-06-04 02:53:31] 2025-06-04 06:53:31,900 [wrapper] cleanup supervisor_pilot  5421 4657
[2025-06-04 02:53:31] 2025-06-04 06:53:31,902 [wrapper] Test setup, not cleaning
[2025-06-04 02:53:31] 2025-06-04 06:53:31,904 [wrapper] apfmon messages muted
[2025-06-04 02:53:31] 2025-06-04 06:53:31,906 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:53:31] 2025-06-04 06:53:31,908 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:53:31]  *** Error codes and diagnostics ***
[2025-06-04 02:53:31]     "exeErrorCode": 0,
[2025-06-04 02:53:31]     "exeErrorDiag": "",
[2025-06-04 02:53:31]     "pilotErrorCode": 0,
[2025-06-04 02:53:31]     "pilotErrorDiag": "",
[2025-06-04 02:53:31]  *** Listing of results directory ***
[2025-06-04 02:53:31] total 387084
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 19:58 pilot3.tar.gz
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 20:36 queuedata.json
[2025-06-04 02:53:31] -rwx------ 1 boincer umatlas     37140 Jun  3 20:38 runpilot2-wrapper.sh
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas       100 Jun  4 01:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:53:31] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 01:23 run_atlas
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas       105 Jun  4 01:23 job.xml
[2025-06-04 02:53:31] -rw-r--r-- 2 boincer umatlas 214009192 Jun  4 01:23 EVNT.45006593._001969.pool.root.1
[2025-06-04 02:53:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:23 start_atlas.sh
[2025-06-04 02:53:31] drwxrwx--x 2 boincer umatlas      4096 Jun  4 01:23 shared
[2025-06-04 02:53:31] -rw-r--r-- 2 boincer umatlas    508888 Jun  4 01:23 input.tar.gz
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas         0 Jun  4 01:23 boinc_lockfile
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 01:23 pandaJob.out
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas    986745 Jun  4 01:23 agis_schedconf.cvmfs.json
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas   1603667 Jun  4 01:23 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:53:31] drwx------ 4 boincer umatlas      4096 Jun  4 01:23 pilot3
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas      6153 Jun  4 02:46 init_data.xml
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas        95 Jun  4 02:52 pilot_heartbeat.json
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas 176993086 Jun  4 02:52 HITS.45006595._049100.pool.root.1
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas       529 Jun  4 02:52 boinc_task_state.xml
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas      1041 Jun  4 02:53 memory_monitor_summary.json
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas    259423 Jun  4 02:53 log.45006595._049100.job.log.tgz.1
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas      7732 Jun  4 02:53 heartbeat.json
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas        27 Jun  4 02:53 wrapper_checkpoint.txt
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 02:53 boinc_mmap_file
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas      4548 Jun  4 02:53 pilotlog.txt
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas    510181 Jun  4 02:53 log.45006595._049100.job.log.1
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas       357 Jun  4 02:53 output.list
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas       620 Jun  4 02:53 runtime_log
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas    788480 Jun  4 02:53 result.tar.gz
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas      8659 Jun  4 02:53 runtime_log.err
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas       656 Jun  4 02:53 Bw5MDmZKrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmjNaKDmALBIum.diag
[2025-06-04 02:53:31] -rw-r--r-- 1 boincer umatlas     21161 Jun  4 02:53 stderr.txt
[2025-06-04 02:53:31] HITS file was successfully produced:
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas 176993086 Jun  4 02:52 shared/HITS.pool.root.1
[2025-06-04 02:53:31]  *** Contents of shared directory: ***
[2025-06-04 02:53:31] total 383132
[2025-06-04 02:53:31] -rw-r--r-- 2 boincer umatlas 214009192 Jun  4 01:23 ATLAS.root_0
[2025-06-04 02:53:31] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:23 start_atlas.sh
[2025-06-04 02:53:31] -rw-r--r-- 2 boincer umatlas    508888 Jun  4 01:23 input.tar.gz
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas 176993086 Jun  4 02:52 HITS.pool.root.1
[2025-06-04 02:53:31] -rw------- 1 boincer umatlas    788480 Jun  4 02:53 result.tar.gz
02:53:33 (967): run_atlas exited; CPU time 20782.150020
02:53:33 (967): called boinc_finish(0)

</stderr_txt>
]]>

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