Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
02:56:21 (2036565): wrapper (7.7.26015): starting
02:56:21 (2036565): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 02:56:21] Arguments: --nthreads 2
[2025-06-04 02:56:21] Threads: 2
[2025-06-04 02:56:21] Checking for CVMFS
[2025-06-04 02:56:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:56:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:56:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:56:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:56:22] 2.12.7.0 1902639 119 54652 146772 1 187 5596628 6144001 922 130560 0 198485 99.990 74045 5193 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 02:56:22] CVMFS is ok
[2025-06-04 02:56:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:56:22] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 02:56:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 02:56:22] Further information can be found at the LHC@home message board.
[2025-06-04 02:56:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:56:22] Checking for apptainer binary...
[2025-06-04 02:56:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:56:22] Running /usr/bin/apptainer --version
[2025-06-04 02:56:22] apptainer version 1.4.0
[2025-06-04 02:56:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:56:22] Aphrodite
[2025-06-04 02:56:22] apptainer works
[2025-06-04 02:56:22] Set ATHENA_PROC_NUMBER=2
[2025-06-04 02:56:22] Set ATHENA_CORE_NUMBER=2
[2025-06-04 02:56:22] Starting ATLAS job with PandaID=6678215879
[2025-06-04 02:56:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:33:21]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:33:21]  mtime=0
[2025-06-04 04:33:21]  protocol_id=None
[2025-06-04 04:33:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 04:33:21]  replicas=None
[2025-06-04 04:33:21]  scope=mc23_13p6TeV
[2025-06-04 04:33:21]  status=None
[2025-06-04 04:33:21]  status_code=0
[2025-06-04 04:33:21]  storage_token=
[2025-06-04 04:33:21]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6678215879/log.45006595._049101.job.log.tgz.1
[2025-06-04 04:33:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/c1/log.45006595._049101.job.log.tgz.1
[2025-06-04 04:33:21]  workdir=None
[2025-06-04 04:33:21] ]
[2025-06-04 04:33:21] 2025-06-04 09:32:59,041 | INFO     | transferring file log.45006595._049101.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6678215879/log.45006595._049101.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 04:33:21] 2025-06-04 09:32:59,041 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6678215879/log.45006595._049101.job.log.tgz.1 /var/lib/boinc/slots/3/log.45006595._049101.job
[2025-06-04 04:33:21] 2025-06-04 09:32:59,050 | INFO     | adding to output.list: log.45006595._049101.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/c1/log.45006595._049101.job.log.tg
[2025-06-04 04:33:21] 2025-06-04 09:32:59,050 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 04:33:21] 2025-06-04 09:32:59,050 | INFO     | summary of transferred files:
[2025-06-04 04:33:21] 2025-06-04 09:32:59,050 | INFO     |  -- lfn=log.45006595._049101.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 04:33:21] 2025-06-04 09:32:59,050 | INFO     | stage-out finished correctly
[2025-06-04 04:33:21] 2025-06-04 09:32:59,736 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 04:33:21] 2025-06-04 09:33:00,135 | INFO     | job 6678215879 has state=finished
[2025-06-04 04:33:21] 2025-06-04 09:33:00,136 | INFO     | preparing for final server update for job 6678215879 in state='finished'
[2025-06-04 04:33:21] 2025-06-04 09:33:00,136 | INFO     | this job has now completed (state=finished)
[2025-06-04 04:33:21] 2025-06-04 09:33:00,136 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 04:33:21] 2025-06-04 09:33:00,136 | INFO     | log transfer has been attempted: DONE
[2025-06-04 04:33:21] 2025-06-04 09:33:00,136 | INFO     | job 6678215879 has finished - writing final server update
[2025-06-04 04:33:21] 2025-06-04 09:33:00,136 | INFO     | total number of processed events: 400 (read)
[2025-06-04 04:33:21] 2025-06-04 09:33:00,137 | INFO     | executing command: lscpu
[2025-06-04 04:33:21] 2025-06-04 09:33:00,148 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 04:33:21] 2025-06-04 09:33:01,759 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 04:33:21] 2025-06-04 09:33:01,759 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6678215879/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:33:21] 2025-06-04 09:33:01,759 | INFO     | extracted standard info from prmon json
[2025-06-04 04:33:21] 2025-06-04 09:33:01,760 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:33:21] 2025-06-04 09:33:01,760 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:33:21] 2025-06-04 09:33:01,760 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:33:21] 2025-06-04 09:33:01,760 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | sum of square deviations: 211285822.0
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | sum of deviations: -5747257221.499999
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | mean x: 1749026763.5
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | mean y: 2306222.0568181816
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | -- intersect: 47578175733.65209
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | intersect: 47578175733.65209
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | chi2: 0.053835398901718866
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | -- intersect: 47578175733.65209
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | current memory leak: -27.20 B/s (using 88 data points, chi2=0.05)
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | ..............................
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | . Timing measurements:
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | . get job = 0 s
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | . initial setup = 2 s
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | . payload setup = 2 s
[2025-06-04 04:33:21] 2025-06-04 09:33:01,761 | INFO     | . stage-in = 0 s
[2025-06-04 04:33:21] 2025-06-04 09:33:01,762 | INFO     | . payload execution = 5772 s
[2025-06-04 04:33:21] 2025-06-04 09:33:01,762 | INFO     | . stage-out = 0 s
[2025-06-04 04:33:21] 2025-06-04 09:33:01,762 | INFO     | . log creation = 0 s
[2025-06-04 04:33:21] 2025-06-04 09:33:01,762 | INFO     | ..............................
[2025-06-04 04:33:21] 2025-06-04 09:33:01,789 | INFO     | 
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | job summary report
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | --------------------------------------------------
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | PanDA job id: 6678215879
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | task id: 45006595
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | errors: (none)
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | pilot state: finished 
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | transexitcode: 0
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | exeerrorcode: 0
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | exeerrordiag: 
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | exitcode: 0
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | exitmsg: OK
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | cpuconsumptiontime: 11359 s
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | nevents: 400
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | neventsw: 0
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | pid: 2046985
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | pgrp: 2046985
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | corecount: 2
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | event service: False
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | sizes: {0: 2405184, 1: 2405390, 10: 2405418, 5778: 2432027, 5779: 2440968, 5780: 2441024, 5782: 2441322}
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | --------------------------------------------------
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | 
[2025-06-04 04:33:21] 2025-06-04 09:33:01,790 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 04:33:21] 2025-06-04 09:33:01,798 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | job 6678215879 has completed (purged errors)
[2025-06-04 04:33:21] 2025-06-04 09:33:01,799 | INFO     | overall cleanup function is called
[2025-06-04 04:33:21] 2025-06-04 09:33:02,806 | INFO     | --- collectZombieJob: --- 10, [2046985]
[2025-06-04 04:33:21] 2025-06-04 09:33:02,806 | INFO     | zombie collector waiting for pid 2046985
[2025-06-04 04:33:21] 2025-06-04 09:33:02,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:33:21] 2025-06-04 09:33:02,806 | INFO     | collected zombie processes
[2025-06-04 04:33:21] 2025-06-04 09:33:02,806 | INFO     | will attempt to kill all subprocesses of pid=2046985
[2025-06-04 04:33:21] 2025-06-04 09:33:02,888 | INFO     | process IDs to be killed: [2046985] (in reverse order)
[2025-06-04 04:33:21] 2025-06-04 09:33:02,922 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:33:21] 2025-06-04 09:33:02,922 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:33:21] 2025-06-04 09:33:02,926 | INFO     | did not find any defunct processes belonging to 2046985
[2025-06-04 04:33:21] 2025-06-04 09:33:02,929 | INFO     | did not find any defunct processes belonging to 2046985
[2025-06-04 04:33:21] 2025-06-04 09:33:02,929 | INFO     | ready for new job
[2025-06-04 04:33:21] 2025-06-04 09:33:02,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:33:21] 2025-06-04 09:33:02,929 | INFO     | **************************************
[2025-06-04 04:33:21] 2025-06-04 09:33:02,929 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:33:21] 2025-06-04 09:33:02,929 | INFO     | **************************************
[2025-06-04 04:33:21] 2025-06-04 09:33:02,929 | INFO     | 
[2025-06-04 04:33:21] 2025-06-04 09:33:02,930 | INFO     | architecture information:
[2025-06-04 04:33:21] 2025-06-04 09:33:02,930 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:33:21] 2025-06-04 09:33:02,936 | INFO     | cat /etc/os-release:
[2025-06-04 04:33:21] NAME="CentOS Linux"
[2025-06-04 04:33:21] VERSION="7 (Core)"
[2025-06-04 04:33:21] ID="centos"
[2025-06-04 04:33:21] ID_LIKE="rhel fedora"
[2025-06-04 04:33:21] VERSION_ID="7"
[2025-06-04 04:33:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:33:21] ANSI_COLOR="0;31"
[2025-06-04 04:33:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:33:21] HOME_URL="https://www.centos.org/"
[2025-06-04 04:33:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:33:21] 
[2025-06-04 04:33:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:33:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:33:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:33:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:33:21] 
[2025-06-04 04:33:21] 2025-06-04 09:33:02,936 | INFO     | **************************************
[2025-06-04 04:33:21] 2025-06-04 09:33:03,439 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 04:33:21] 2025-06-04 09:33:03,445 | INFO     | sufficient remaining disk space (2660139794432 B)
[2025-06-04 04:33:21] 2025-06-04 09:33:03,445 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:33:21] 2025-06-04 09:33:03,445 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:33:21] 2025-06-04 09:33:03,446 | INFO     | update_server=False
[2025-06-04 04:33:21] 2025-06-04 09:33:03,446 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:33:21] 2025-06-04 09:33:03,446 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:33:21] 2025-06-04 09:33:03,645 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:33:21] 2025-06-04 09:33:03,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:33:21] 2025-06-04 09:33:03,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:33:21] 2025-06-04 09:33:03,759 | WARNING  | process 2046985 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 04:33:21] 2025-06-04 09:33:03,816 | INFO     | using path: /var/lib/boinc/slots/3/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:33:21] 2025-06-04 09:33:03,816 | INFO     | using path: /var/lib/boinc/slots/3/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:33:21] 2025-06-04 09:33:03,817 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/slots/3/PanDA_Pilot-6678215879/payload.stdout) since it has not been created yet
[2025-06-04 04:33:21] 2025-06-04 09:33:03,817 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 04:33:21] 2025-06-04 09:33:03,823 | INFO     | sufficient remaining disk space (2660139794432 B)
[2025-06-04 04:33:21] 2025-06-04 09:33:03,823 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-06-04 04:33:21] 2025-06-04 09:33:03,823 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/3/PanDA_Pilot-6678215879/HITS.45006595._049101.pool.root.1 since it does not exist
[2025-06-04 04:33:21] 2025-06-04 09:33:03,901 | INFO     | number of running child processes to parent process 2046985: 1
[2025-06-04 04:33:21] 2025-06-04 09:33:03,901 | INFO     | maximum number of monitored processes: 6
[2025-06-04 04:33:21] 2025-06-04 09:33:03,901 | INFO     | aborting job monitoring since job object (job id=6678215879) has expired
[2025-06-04 04:33:21] 2025-06-04 09:33:03,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:33:21] 2025-06-04 09:33:03,901 | INFO     | will abort loop
[2025-06-04 04:33:21] 2025-06-04 09:33:04,399 | INFO     | all job control threads have been joined
[2025-06-04 04:33:21] 2025-06-04 09:33:04,447 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:04,450 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:04,512 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:04,539 | INFO     | all data control threads have been joined
[2025-06-04 04:33:21] 2025-06-04 09:33:04,585 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:33:21] 2025-06-04 09:33:04,616 | INFO     | all payload control threads have been joined
[2025-06-04 04:33:21] 2025-06-04 09:33:04,805 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:04,906 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:05,404 | INFO     | [job] control thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:05,544 | INFO     | [data] control thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:05,556 | INFO     | [job] validate thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:05,615 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:05,618 | INFO     | [payload] control thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:05,624 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:05,685 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:05,769 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:33:21] 2025-06-04 09:33:05,859 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:06,588 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:09,774 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:14,296 | INFO     | job.realtimelogging is not enabled
[2025-06-04 04:33:21] 2025-06-04 09:33:15,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:33:21] 2025-06-04 09:33:16,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140552125187904)>', '<ExcThread(monitor, started 140551638730496)>']
[2025-06-04 04:33:21] 2025-06-04 09:33:16,708 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:33:21] 2025-06-04 09:33:16,708 | INFO     | [monitor] control thread has ended
[2025-06-04 04:33:21] 2025-06-04 09:33:21,576 | INFO     | all workflow threads have been joined
[2025-06-04 04:33:21] 2025-06-04 09:33:21,576 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:33:21] 2025-06-04 09:33:21,576 | INFO     | traces error code: 0
[2025-06-04 04:33:21] 2025-06-04 09:33:21,576 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:33:21] 2025-06-04 09:33:21,627 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:33:21] 2025-06-04 09:33:21,629 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:33:21] 2025-06-04 09:33:21,630 [wrapper] pilotpid: 2040295
[2025-06-04 04:33:21] 2025-06-04 09:33:21,632 [wrapper] Pilot exit status: 0
[2025-06-04 04:33:21] 2025-06-04 09:33:21,638 [wrapper] pandaids: 6678215879
[2025-06-04 04:33:21] 2025-06-04 09:33:21,664 [wrapper] cleanup supervisor_pilot 2117272 2040296
[2025-06-04 04:33:21] 2025-06-04 09:33:21,665 [wrapper] Test setup, not cleaning
[2025-06-04 04:33:21] 2025-06-04 09:33:21,667 [wrapper] apfmon messages muted
[2025-06-04 04:33:21] 2025-06-04 09:33:21,669 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:33:21] 2025-06-04 09:33:21,670 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:33:21]  *** Error codes and diagnostics ***
[2025-06-04 04:33:21]     "exeErrorCode": 0,
[2025-06-04 04:33:21]     "exeErrorDiag": "",
[2025-06-04 04:33:21]     "pilotErrorCode": 0,
[2025-06-04 04:33:21]     "pilotErrorDiag": "",
[2025-06-04 04:33:21]  *** Listing of results directory ***
[2025-06-04 04:33:21] total 385348
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:36 queuedata.json
[2025-06-04 04:33:21] -rwx------ 1 boinc boinc     37140 Jun  3 19:38 runpilot2-wrapper.sh
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc       100 Jun  4 02:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:33:21] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 02:56 run_atlas
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc       105 Jun  4 02:56 job.xml
[2025-06-04 04:33:21] -rw-r--r-- 2 boinc boinc 214009192 Jun  4 02:56 EVNT.45006593._001969.pool.root.1
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc      6996 Jun  4 02:56 init_data.xml
[2025-06-04 04:33:21] drwxrwx--x 1 boinc boinc        76 Jun  4 02:56 shared
[2025-06-04 04:33:21] -rw-r--r-- 2 boinc boinc    508885 Jun  4 02:56 input.tar.gz
[2025-06-04 04:33:21] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:56 start_atlas.sh
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc         0 Jun  4 02:56 boinc_lockfile
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc      2525 Jun  4 02:56 pandaJob.out
[2025-06-04 04:33:21] -rw------- 1 boinc boinc    986745 Jun  4 02:56 agis_schedconf.cvmfs.json
[2025-06-04 04:33:21] -rw------- 1 boinc boinc   1603667 Jun  4 02:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:33:21] drwx------ 1 boinc boinc       368 Jun  4 02:56 pilot3
[2025-06-04 04:33:21] -rw------- 1 boinc boinc        95 Jun  4 04:32 pilot_heartbeat.json
[2025-06-04 04:33:21] -rw------- 1 boinc boinc 175187627 Jun  4 04:32 HITS.45006595._049101.pool.root.1
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc       529 Jun  4 04:32 boinc_task_state.xml
[2025-06-04 04:33:21] -rw------- 1 boinc boinc      1013 Jun  4 04:32 memory_monitor_summary.json
[2025-06-04 04:33:21] -rw------- 1 boinc boinc    232807 Jun  4 04:32 log.45006595._049101.job.log.tgz.1
[2025-06-04 04:33:21] -rw------- 1 boinc boinc      7639 Jun  4 04:33 heartbeat.json
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc      8192 Jun  4 04:33 boinc_mmap_file
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc        27 Jun  4 04:33 wrapper_checkpoint.txt
[2025-06-04 04:33:21] -rw------- 1 boinc boinc      5708 Jun  4 04:33 pilotlog.txt
[2025-06-04 04:33:21] -rw------- 1 boinc boinc    560317 Jun  4 04:33 log.45006595._049101.job.log.1
[2025-06-04 04:33:21] -rw------- 1 boinc boinc       357 Jun  4 04:33 output.list
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc       620 Jun  4 04:33 runtime_log
[2025-06-04 04:33:21] -rw------- 1 boinc boinc    808960 Jun  4 04:33 result.tar.gz
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc      8665 Jun  4 04:33 runtime_log.err
[2025-06-04 04:33:21] -rw------- 1 boinc boinc       645 Jun  4 04:33 gM8MDmZKrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmkNaKDmVim2om.diag
[2025-06-04 04:33:21] -rw-r--r-- 1 boinc boinc     21805 Jun  4 04:33 stderr.txt
[2025-06-04 04:33:21] HITS file was successfully produced:
[2025-06-04 04:33:21] -rw------- 1 boinc boinc 175187627 Jun  4 04:32 shared/HITS.pool.root.1
[2025-06-04 04:33:21]  *** Contents of shared directory: ***
[2025-06-04 04:33:21] total 381388
[2025-06-04 04:33:21] -rw-r--r-- 2 boinc boinc 214009192 Jun  4 02:56 ATLAS.root_0
[2025-06-04 04:33:21] -rw-r--r-- 2 boinc boinc    508885 Jun  4 02:56 input.tar.gz
[2025-06-04 04:33:21] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:56 start_atlas.sh
[2025-06-04 04:33:21] -rw------- 1 boinc boinc 175187627 Jun  4 04:32 HITS.pool.root.1
[2025-06-04 04:33:21] -rw------- 1 boinc boinc    808960 Jun  4 04:33 result.tar.gz
04:33:23 (2036565): run_atlas exited; CPU time 11407.827014
04:33:23 (2036565): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN