Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:45:37 (822096): wrapper (7.7.26015): starting
17:45:37 (822096): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 17:45:37] Arguments: --nthreads 4
[2025-06-05 17:45:37] Threads: 4
[2025-06-05 17:45:37] Checking for CVMFS
[2025-06-05 17:45:37] No cvmfs_config command found, will try listing directly
[2025-06-05 17:45:37] CVMFS is ok
[2025-06-05 17:45:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 17:45:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 17:45:37] Further information can be found at the LHC@home message board.
[2025-06-05 17:45:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 17:45:37] Checking for apptainer binary...
[2025-06-05 17:45:37] which: no apptainer in ((null))
[2025-06-05 17:45:37] apptainer is not installed, using version from CVMFS
[2025-06-05 17:45:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 17:45:37] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-06-05 17:45:37] apptainer works
[2025-06-05 17:45:37] Set ATHENA_PROC_NUMBER=4
[2025-06-05 17:45:37] Set ATHENA_CORE_NUMBER=4
[2025-06-05 17:45:37] Starting ATLAS job with PandaID=6678286641
[2025-06-05 17:45:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 20:02:51]  *** The last 200 lines of the pilot log: ***
[2025-06-05 20:02:51] 2025-06-05 17:56:10,023 | INFO     | PID=826037 has CPU usage=14.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 20:02:51] 2025-06-05 17:56:10,024 | INFO     | .. there are 12 such processes running
[2025-06-05 20:02:51] 2025-06-05 17:56:11,857 | INFO     | monitor loop #548: job 0:6678286641 is in state 'finished'
[2025-06-05 20:02:51] 2025-06-05 17:56:11,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 20:02:51] 2025-06-05 17:56:14,361 | INFO     | monitor loop #549: job 0:6678286641 is in state 'finished'
[2025-06-05 20:02:51] 2025-06-05 17:56:14,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 20:02:51] 2025-06-05 17:56:16,449 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 20:02:51] 2025-06-05 17:56:16,449 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6678286641/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 20:02:51] 2025-06-05 17:56:16,450 | INFO     | extracted standard info from prmon json
[2025-06-05 20:02:51] 2025-06-05 17:56:16,450 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 20:02:51] 2025-06-05 17:56:16,450 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 20:02:51] 2025-06-05 17:56:16,451 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 20:02:51] 2025-06-05 17:56:16,451 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 20:02:51] 2025-06-05 17:56:16,453 | INFO     | fitting pss+swap vs Time
[2025-06-05 20:02:51] 2025-06-05 17:56:16,454 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 20:02:51] 2025-06-05 17:56:16,454 | INFO     | sum of deviations: 3481211379.0
[2025-06-05 20:02:51] 2025-06-05 17:56:16,454 | INFO     | mean x: 1749142255.5
[2025-06-05 20:02:51] 2025-06-05 17:56:16,455 | INFO     | mean y: 2330013.078125
[2025-06-05 20:02:51] 2025-06-05 17:56:16,455 | INFO     | -- intersect: -9361935110.900612
[2025-06-05 20:02:51] 2025-06-05 17:56:16,455 | INFO     | intersect: -9361935110.900612
[2025-06-05 20:02:51] 2025-06-05 17:56:16,455 | INFO     | chi2: 1.4252221300005532
[2025-06-05 20:02:51] 2025-06-05 17:56:16,455 | INFO     | sum of square deviations: 576985702.0
[2025-06-05 20:02:51] 2025-06-05 17:56:16,456 | INFO     | sum of deviations: 3500475971.9999986
[2025-06-05 20:02:51] 2025-06-05 17:56:16,456 | INFO     | mean x: 1749142103.0
[2025-06-05 20:02:51] 2025-06-05 17:56:16,456 | INFO     | mean y: 2330053.1707317075
[2025-06-05 20:02:51] 2025-06-05 17:56:16,456 | INFO     | -- intersect: -10609423205.084265
[2025-06-05 20:02:51] 2025-06-05 17:56:16,456 | INFO     | intersect: -10609423205.084265
[2025-06-05 20:02:51] 2025-06-05 17:56:16,457 | INFO     | chi2: 1.42682255297263
[2025-06-05 20:02:51] 2025-06-05 17:56:16,457 | INFO     | current chi2=1.42682255297263 (change=-0.11229287971245025 %)
[2025-06-05 20:02:51] 2025-06-05 17:56:16,457 | INFO     | right removable region: 122
[2025-06-05 20:02:51] 2025-06-05 17:56:16,457 | INFO     | sum of square deviations: 576985702.0
[2025-06-05 20:02:51] 2025-06-05 17:56:16,458 | INFO     | sum of deviations: -13103722503.000004
[2025-06-05 20:02:51] 2025-06-05 17:56:16,458 | INFO     | mean x: 1749142408.0
[2025-06-05 20:02:51] 2025-06-05 17:56:16,458 | INFO     | mean y: 2363837.3333333335
[2025-06-05 20:02:51] 2025-06-05 17:56:16,458 | INFO     | -- intersect: 39726531443.589226
[2025-06-05 20:02:51] 2025-06-05 17:56:16,458 | INFO     | intersect: 39726531443.589226
[2025-06-05 20:02:51] 2025-06-05 17:56:16,458 | INFO     | chi2: 0.03208320236426049
[2025-06-05 20:02:51] 2025-06-05 17:56:16,458 | INFO     | current chi2=0.03208320236426049 (change=97.7488981058519 %)
[2025-06-05 20:02:51] 2025-06-05 17:56:16,459 | INFO     | sum of square deviations: 509440249.5
[2025-06-05 20:02:51] 2025-06-05 17:56:16,459 | INFO     | sum of deviations: -10755038984.5
[2025-06-05 20:02:51] 2025-06-05 17:56:16,459 | INFO     | mean x: 1749142560.5
[2025-06-05 20:02:51] 2025-06-05 17:56:16,459 | INFO     | mean y: 2358524.6525423727
[2025-06-05 20:02:51] 2025-06-05 17:56:16,459 | INFO     | -- intersect: 36929351329.18486
[2025-06-05 20:02:51] 2025-06-05 17:56:16,459 | INFO     | intersect: 36929351329.18486
[2025-06-05 20:02:51] 2025-06-05 17:56:16,460 | INFO     | chi2: 0.030033173373699554
[2025-06-05 20:02:51] 2025-06-05 17:56:16,460 | INFO     | current chi2=0.030033173373699554 (change=6.389726833642366 %)
[2025-06-05 20:02:51] 2025-06-05 17:56:16,460 | INFO     | left removable region: 20
[2025-06-05 20:02:51] 2025-06-05 17:56:16,460 | INFO     | sum of square deviations: 329031285.5
[2025-06-05 20:02:51] 2025-06-05 17:56:16,461 | INFO     | sum of deviations: -4954278785.0
[2025-06-05 20:02:51] 2025-06-05 17:56:16,461 | INFO     | mean x: 1749142682.5
[2025-06-05 20:02:51] 2025-06-05 17:56:16,461 | INFO     | mean y: 2345312.470588235
[2025-06-05 20:02:51] 2025-06-05 17:56:16,461 | INFO     | -- intersect: 26339477572.33814
[2025-06-05 20:02:51] 2025-06-05 17:56:16,461 | INFO     | intersect: 26339477572.33814
[2025-06-05 20:02:51] 2025-06-05 17:56:16,461 | INFO     | chi2: 0.011711317988561416
[2025-06-05 20:02:51] 2025-06-05 17:56:16,462 | INFO     | -- intersect: 26339477572.33814
[2025-06-05 20:02:51] 2025-06-05 17:56:16,462 | INFO     | current memory leak: -15.06 B/s (using 102 data points, chi2=0.01)
[2025-06-05 20:02:51] 2025-06-05 17:56:16,462 | INFO     | ..............................
[2025-06-05 20:02:51] 2025-06-05 17:56:16,462 | INFO     | . Timing measurements:
[2025-06-05 20:02:51] 2025-06-05 17:56:16,462 | INFO     | . get job = 0 s
[2025-06-05 20:02:51] 2025-06-05 17:56:16,462 | INFO     | . initial setup = 1 s
[2025-06-05 20:02:51] 2025-06-05 17:56:16,463 | INFO     | . payload setup = 8 s
[2025-06-05 20:02:51] 2025-06-05 17:56:16,463 | INFO     | . stage-in = 0 s
[2025-06-05 20:02:51] 2025-06-05 17:56:16,463 | INFO     | . payload execution = 7784 s
[2025-06-05 20:02:51] 2025-06-05 17:56:16,463 | INFO     | . stage-out = 0 s
[2025-06-05 20:02:51] 2025-06-05 17:56:16,463 | INFO     | . log creation = 0 s
[2025-06-05 20:02:51] 2025-06-05 17:56:16,463 | INFO     | ..............................
[2025-06-05 20:02:51] 2025-06-05 17:56:16,559 | INFO     | 
[2025-06-05 20:02:51] 2025-06-05 17:56:16,559 | INFO     | job summary report
[2025-06-05 20:02:51] 2025-06-05 17:56:16,559 | INFO     | --------------------------------------------------
[2025-06-05 20:02:51] 2025-06-05 17:56:16,559 | INFO     | PanDA job id: 6678286641
[2025-06-05 20:02:51] 2025-06-05 17:56:16,559 | INFO     | task id: 45006595
[2025-06-05 20:02:51] 2025-06-05 17:56:16,559 | INFO     | errors: (none)
[2025-06-05 20:02:51] 2025-06-05 17:56:16,559 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 20:02:51] 2025-06-05 17:56:16,559 | INFO     | pilot state: finished 
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | transexitcode: 0
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | exeerrorcode: 0
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | exeerrordiag: 
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | exitcode: 0
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | exitmsg: OK
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | cpuconsumptiontime: 29575 s
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | nevents: 400
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | neventsw: 0
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | pid: 833571
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | pgrp: 833571
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | corecount: 4
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | event service: False
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | sizes: {0: 2397240, 1: 2397382, 6: 2397588, 11: 2397616, 7797: 2425274, 7798: 2434239, 7800: 2434423, 7810: 2434593}
[2025-06-05 20:02:51] 2025-06-05 17:56:16,560 | INFO     | --------------------------------------------------
[2025-06-05 20:02:51] 2025-06-05 17:56:16,561 | INFO     | 
[2025-06-05 20:02:51] 2025-06-05 17:56:16,561 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-06-05 20:02:51] 2025-06-05 17:56:16,592 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,593 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,593 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,593 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,593 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,594 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,594 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,594 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 20:02:51] 2025-06-05 17:56:16,594 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,594 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 20:02:51] 2025-06-05 17:56:16,595 | INFO     | job 6678286641 has completed (purged errors)
[2025-06-05 20:02:51] 2025-06-05 17:56:16,595 | INFO     | overall cleanup function is called
[2025-06-05 20:02:51] 2025-06-05 17:56:17,603 | INFO     | --- collectZombieJob: --- 10, [833571]
[2025-06-05 20:02:51] 2025-06-05 17:56:17,604 | INFO     | zombie collector waiting for pid 833571
[2025-06-05 20:02:51] 2025-06-05 17:56:17,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 20:02:51] 2025-06-05 17:56:17,604 | INFO     | collected zombie processes
[2025-06-05 20:02:51] 2025-06-05 17:56:17,604 | INFO     | will attempt to kill all subprocesses of pid=833571
[2025-06-05 20:02:51] 2025-06-05 17:56:18,286 | INFO     | process IDs to be killed: [833571] (in reverse order)
[2025-06-05 20:02:51] 2025-06-05 17:56:18,516 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 20:02:51] 2025-06-05 17:56:18,516 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 20:02:51] 2025-06-05 17:56:18,542 | INFO     | did not find any defunct processes belonging to 833571
[2025-06-05 20:02:51] 2025-06-05 17:56:18,567 | INFO     | did not find any defunct processes belonging to 833571
[2025-06-05 20:02:51] 2025-06-05 17:56:18,567 | INFO     | ready for new job
[2025-06-05 20:02:51] 2025-06-05 17:56:18,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 20:02:51] 2025-06-05 17:56:18,570 | INFO     | **************************************
[2025-06-05 20:02:51] 2025-06-05 17:56:18,570 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 20:02:51] 2025-06-05 17:56:18,570 | INFO     | **************************************
[2025-06-05 20:02:51] 2025-06-05 17:56:18,570 | INFO     | 
[2025-06-05 20:02:51] 2025-06-05 17:56:18,578 | INFO     | architecture information:
[2025-06-05 20:02:51] 2025-06-05 17:56:18,579 | INFO     | executing command: cat /etc/os-release
[2025-06-05 20:02:51] 2025-06-05 17:56:18,602 | INFO     | cat /etc/os-release:
[2025-06-05 20:02:51] NAME="CentOS Linux"
[2025-06-05 20:02:51] VERSION="7 (Core)"
[2025-06-05 20:02:51] ID="centos"
[2025-06-05 20:02:51] ID_LIKE="rhel fedora"
[2025-06-05 20:02:51] VERSION_ID="7"
[2025-06-05 20:02:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 20:02:51] ANSI_COLOR="0;31"
[2025-06-05 20:02:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 20:02:51] HOME_URL="https://www.centos.org/"
[2025-06-05 20:02:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 20:02:51] 
[2025-06-05 20:02:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 20:02:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 20:02:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 20:02:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 20:02:51] 
[2025-06-05 20:02:51] 2025-06-05 17:56:18,602 | INFO     | **************************************
[2025-06-05 20:02:51] 2025-06-05 17:56:19,105 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-06-05 20:02:51] 2025-06-05 17:56:19,130 | INFO     | sufficient remaining disk space (3296194461696 B)
[2025-06-05 20:02:51] 2025-06-05 17:56:19,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 20:02:51] 2025-06-05 17:56:19,131 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 20:02:51] 2025-06-05 17:56:19,131 | INFO     | update_server=False
[2025-06-05 20:02:51] 2025-06-05 17:56:19,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 20:02:51] 2025-06-05 17:56:19,227 | INFO     | all payload control threads have been joined
[2025-06-05 20:02:51] 2025-06-05 17:56:19,372 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 20:02:51] 2025-06-05 17:56:19,373 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 20:02:51] 2025-06-05 17:56:19,373 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:02:51] 2025-06-05 17:56:19,373 | INFO     | will abort loop
[2025-06-05 20:02:51] 2025-06-05 17:56:19,787 | INFO     | all data control threads have been joined
[2025-06-05 20:02:51] 2025-06-05 17:56:19,928 | INFO     | all job control threads have been joined
[2025-06-05 20:02:51] 2025-06-05 17:56:20,051 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 20:02:51] 2025-06-05 17:56:20,052 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 20:02:51] 2025-06-05 17:56:20,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 20:02:51] 2025-06-05 17:56:20,136 | INFO     | [job] retrieve thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:20,143 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 20:02:51] 2025-06-05 17:56:20,178 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:20,233 | INFO     | [payload] control thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:20,378 | INFO     | [job] job monitor thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:20,670 | INFO     | [payload] validate_post thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:20,715 | INFO     | [payload] failed_post thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:20,792 | INFO     | [data] control thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:20,933 | INFO     | [job] control thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:21,063 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:21,353 | INFO     | [job] validate thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:21,429 | INFO     | [data] copytool_in thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:21,525 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:21,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 20:02:51] 2025-06-05 17:56:21,580 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:21,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 20:02:51] 2025-06-05 17:56:22,148 | INFO     | [data] copytool_out thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:22,575 | INFO     | [job] queue monitor thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:25,743 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 20:02:51] 2025-06-05 17:56:27,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23435401180992)>', '<ExcThread(monitor, started 23435159758592)>']
[2025-06-05 20:02:51] 2025-06-05 17:56:28,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 20:02:51] 2025-06-05 17:56:28,085 | INFO     | [monitor] control thread has ended
[2025-06-05 20:02:51] 2025-06-05 17:56:32,794 | INFO     | all workflow threads have been joined
[2025-06-05 20:02:51] 2025-06-05 17:56:32,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 20:02:51] 2025-06-05 17:56:32,795 | INFO     | traces error code: 0
[2025-06-05 20:02:51] 2025-06-05 17:56:32,795 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 20:02:51] 2025-06-05 17:56:32,934 [wrapper] ==== pilot stdout END ====
[2025-06-05 20:02:51] 2025-06-05 17:56:32,938 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 20:02:51] 2025-06-05 17:56:32,942 [wrapper] pilotpid: 826037
[2025-06-05 20:02:51] 2025-06-05 17:56:32,945 [wrapper] Pilot exit status: 0
[2025-06-05 20:02:51] 2025-06-05 17:56:32,960 [wrapper] pandaids: 6678286641
[2025-06-05 20:02:51] 2025-06-05 17:56:33,103 [wrapper] cleanup supervisor_pilot 1259984 826038
[2025-06-05 20:02:51] 2025-06-05 17:56:33,108 [wrapper] Test setup, not cleaning
[2025-06-05 20:02:51] 2025-06-05 17:56:33,112 [wrapper] apfmon messages muted
[2025-06-05 20:02:51] 2025-06-05 17:56:33,115 [wrapper] ==== wrapper stdout END ====
[2025-06-05 20:02:51] 2025-06-05 17:56:33,120 [wrapper] ==== wrapper stderr END ====
[2025-06-05 20:02:51]  *** Error codes and diagnostics ***
[2025-06-05 20:02:51]     "exeErrorCode": 0,
[2025-06-05 20:02:51]     "exeErrorDiag": "",
[2025-06-05 20:02:51]     "pilotErrorCode": 0,
[2025-06-05 20:02:51]     "pilotErrorDiag": "",
[2025-06-05 20:02:51]  *** Listing of results directory ***
[2025-06-05 20:02:51] total 393168
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-05 20:02:51] -rwx------ 1 boinc boinc     37140 Jun  4 05:15 runpilot2-wrapper.sh
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc      5111 Jun  4 05:15 queuedata.json
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc       100 Jun  5 17:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 20:02:51] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 17:45 run_atlas
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc       105 Jun  5 17:45 job.xml
[2025-06-05 20:02:51] -rw-r--r-- 2 boinc boinc 216354765 Jun  5 17:45 EVNT.45006593._002065.pool.root.1
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc      6687 Jun  5 17:45 init_data.xml
[2025-06-05 20:02:51] -rw-r--r-- 2 boinc boinc     15093 Jun  5 17:45 start_atlas.sh
[2025-06-05 20:02:51] drwxrwx--x 2 boinc boinc      4096 Jun  5 17:45 shared
[2025-06-05 20:02:51] -rw-r--r-- 2 boinc boinc    508880 Jun  5 17:45 input.tar.gz
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc         0 Jun  5 17:45 boinc_lockfile
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc      2525 Jun  5 17:45 pandaJob.out
[2025-06-05 20:02:51] -rw------- 1 boinc boinc    983229 Jun  5 17:45 agis_schedconf.cvmfs.json
[2025-06-05 20:02:51] -rw------- 1 boinc boinc   1598969 Jun  5 17:45 agis_ddmendpoints.agis.ALL.json
[2025-06-05 20:02:51] drwx------ 4 boinc boinc      4096 Jun  5 17:45 pilot3
[2025-06-05 20:02:51] -rw------- 1 boinc boinc 180366878 Jun  5 19:55 HITS.45006595._051554.pool.root.1
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc       529 Jun  5 19:55 boinc_task_state.xml
[2025-06-05 20:02:51] -rw------- 1 boinc boinc      1029 Jun  5 19:56 memory_monitor_summary.json
[2025-06-05 20:02:51] -rw------- 1 boinc boinc    288230 Jun  5 19:56 log.45006595._051554.job.log.tgz.1
[2025-06-05 20:02:51] -rw------- 1 boinc boinc        95 Jun  5 19:56 pilot_heartbeat.json
[2025-06-05 20:02:51] -rw------- 1 boinc boinc      7706 Jun  5 19:56 heartbeat.json
[2025-06-05 20:02:51] -rw------- 1 boinc boinc      4551 Jun  5 19:56 pilotlog.txt
[2025-06-05 20:02:51] -rw------- 1 boinc boinc    739128 Jun  5 19:56 log.45006595._051554.job.log.1
[2025-06-05 20:02:51] -rw------- 1 boinc boinc       357 Jun  5 19:56 output.list
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc       620 Jun  5 19:56 runtime_log
[2025-06-05 20:02:51] -rw------- 1 boinc boinc   1044480 Jun  5 19:56 result.tar.gz
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc      9040 Jun  5 19:56 runtime_log.err
[2025-06-05 20:02:51] -rw------- 1 boinc boinc       662 Jun  5 19:56 7vCNDmBmtg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYcaKDmcDjCtm.diag
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc        27 Jun  5 20:02 wrapper_checkpoint.txt
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc      8192 Jun  5 20:02 boinc_mmap_file
[2025-06-05 20:02:51] -rw-r--r-- 1 boinc boinc     20908 Jun  5 20:02 stderr.txt
[2025-06-05 20:02:51] HITS file was successfully produced:
[2025-06-05 20:02:51] -rw------- 1 boinc boinc 180366878 Jun  5 19:55 shared/HITS.pool.root.1
[2025-06-05 20:02:51]  *** Contents of shared directory: ***
[2025-06-05 20:02:51] total 388968
[2025-06-05 20:02:51] -rw-r--r-- 2 boinc boinc 216354765 Jun  5 17:45 ATLAS.root_0
[2025-06-05 20:02:51] -rw-r--r-- 2 boinc boinc     15093 Jun  5 17:45 start_atlas.sh
[2025-06-05 20:02:51] -rw-r--r-- 2 boinc boinc    508880 Jun  5 17:45 input.tar.gz
[2025-06-05 20:02:51] -rw------- 1 boinc boinc 180366878 Jun  5 19:55 HITS.pool.root.1
[2025-06-05 20:02:51] -rw------- 1 boinc boinc   1044480 Jun  5 19:56 result.tar.gz
20:02:52 (822096): run_atlas exited; CPU time 29986.216079
20:02:52 (822096): called boinc_finish(0)

</stderr_txt>
]]>

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