Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:15:54 (14710): wrapper (7.7.26015): starting
01:15:54 (14710): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 01:15:54] Arguments: --nthreads 12
[2025-06-04 01:15:54] Threads: 12
[2025-06-04 01:15:54] Checking for CVMFS
[2025-06-04 01:15:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:15:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:15:54] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:15:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:15:55] 2.11.2.0 2945 35249 88712 146768 0 58 18696543 20275200 1 130560 0 15915087 99.983 6477925 7929 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 01:15:55] CVMFS is ok
[2025-06-04 01:15:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:15:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:15:55] Further information can be found at the LHC@home message board.
[2025-06-04 01:15:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:15:55] Checking for apptainer binary...
[2025-06-04 01:15:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:15:55] Running /usr/bin/apptainer --version
[2025-06-04 01:15:55] apptainer version 1.3.2-1.el7
[2025-06-04 01:15:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:15:56] c-205-2.aglt2.org
[2025-06-04 01:15:56] apptainer works
[2025-06-04 01:15:56] Set ATHENA_PROC_NUMBER=12
[2025-06-04 01:15:56] Set ATHENA_CORE_NUMBER=12
[2025-06-04 01:15:56] Starting ATLAS job with PandaID=6678286389
[2025-06-04 01:15:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:20:59]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:20:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 02:20:59]  replicas=None
[2025-06-04 02:20:59]  scope=mc23_13p6TeV
[2025-06-04 02:20:59]  status=None
[2025-06-04 02:20:59]  status_code=0
[2025-06-04 02:20:59]  storage_token=
[2025-06-04 02:20:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678286389/log.45006595._051317.job.log.tgz.1
[2025-06-04 02:20:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/a3/log.45006595._051317.job.log.tgz.1
[2025-06-04 02:20:59]  workdir=None
[2025-06-04 02:20:59] ]
[2025-06-04 02:20:59] 2025-06-04 06:20:29,407 | INFO     | transferring file log.45006595._051317.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678286389/log.45006595._051317.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:20:59] 2025-06-04 06:20:29,407 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678286389/log.45006595._051317.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._051317.job
[2025-06-04 02:20:59] 2025-06-04 06:20:29,429 | INFO     | adding to output.list: log.45006595._051317.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b8/a3/log.45006595._051317.job.log.tg
[2025-06-04 02:20:59] 2025-06-04 06:20:29,430 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:20:59] 2025-06-04 06:20:29,430 | INFO     | summary of transferred files:
[2025-06-04 02:20:59] 2025-06-04 06:20:29,430 | INFO     |  -- lfn=log.45006595._051317.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:20:59] 2025-06-04 06:20:29,431 | INFO     | stage-out finished correctly
[2025-06-04 02:20:59] 2025-06-04 06:20:31,539 | WARNING  | process 24753 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 02:20:59] 2025-06-04 06:20:31,540 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286389/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:20:59] 2025-06-04 06:20:31,628 | INFO     | number of running child processes to parent process 24753: 1
[2025-06-04 02:20:59] 2025-06-04 06:20:31,628 | INFO     | maximum number of monitored processes: 6
[2025-06-04 02:20:59] 2025-06-04 06:20:32,560 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:20:59] 2025-06-04 06:20:34,137 | INFO     | monitor loop #288: job 0:6678286389 is in state 'finished'
[2025-06-04 02:20:59] 2025-06-04 06:20:34,137 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:20:59] 2025-06-04 06:20:35,068 | INFO     | job 6678286389 has state=finished
[2025-06-04 02:20:59] 2025-06-04 06:20:35,068 | INFO     | preparing for final server update for job 6678286389 in state='finished'
[2025-06-04 02:20:59] 2025-06-04 06:20:35,130 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 02:20:59] 2025-06-04 06:20:35,131 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:20:59] 2025-06-04 06:20:35,131 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:20:59] 2025-06-04 06:20:35,131 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:20:59] 2025-06-04 06:20:35,131 | INFO     | job 6678286389 has finished - writing final server update
[2025-06-04 02:20:59] 2025-06-04 06:20:35,132 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:20:59] 2025-06-04 06:20:35,133 | INFO     | executing command: lscpu
[2025-06-04 02:20:59] 2025-06-04 06:20:35,158 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:20:59] 2025-06-04 06:20:36,640 | INFO     | monitor loop #289: job 0:6678286389 is in state 'finished'
[2025-06-04 02:20:59] 2025-06-04 06:20:36,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:20:59] 2025-06-04 06:20:39,144 | INFO     | monitor loop #290: job 0:6678286389 is in state 'finished'
[2025-06-04 02:20:59] 2025-06-04 06:20:39,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:20:59] 2025-06-04 06:20:39,790 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 02:20:59] 2025-06-04 06:20:39,791 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678286389/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:20:59] 2025-06-04 06:20:39,791 | INFO     | extracted standard info from prmon json
[2025-06-04 02:20:59] 2025-06-04 06:20:39,792 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:20:59] 2025-06-04 06:20:39,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:20:59] 2025-06-04 06:20:39,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:20:59] 2025-06-04 06:20:39,793 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:20:59] 2025-06-04 06:20:39,795 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:20:59] 2025-06-04 06:20:39,795 | INFO     | sum of square deviations: 54438230.0
[2025-06-04 02:20:59] 2025-06-04 06:20:39,796 | INFO     | sum of deviations: -4174070668.0000005
[2025-06-04 02:20:59] 2025-06-04 06:20:39,796 | INFO     | mean x: 1749016183.5
[2025-06-04 02:20:59] 2025-06-04 06:20:39,796 | INFO     | mean y: 2873749.1428571427
[2025-06-04 02:20:59] 2025-06-04 06:20:39,796 | INFO     | -- intersect: 134109312356.8025
[2025-06-04 02:20:59] 2025-06-04 06:20:39,796 | INFO     | intersect: 134109312356.8025
[2025-06-04 02:20:59] 2025-06-04 06:20:39,797 | INFO     | chi2: 0.0555534432432134
[2025-06-04 02:20:59] 2025-06-04 06:20:39,797 | INFO     | -- intersect: 134109312356.8025
[2025-06-04 02:20:59] 2025-06-04 06:20:39,797 | INFO     | current memory leak: -76.68 B/s (using 56 data points, chi2=0.06)
[2025-06-04 02:20:59] 2025-06-04 06:20:39,798 | INFO     | ..............................
[2025-06-04 02:20:59] 2025-06-04 06:20:39,798 | INFO     | . Timing measurements:
[2025-06-04 02:20:59] 2025-06-04 06:20:39,798 | INFO     | . get job = 0 s
[2025-06-04 02:20:59] 2025-06-04 06:20:39,798 | INFO     | . initial setup = 2 s
[2025-06-04 02:20:59] 2025-06-04 06:20:39,798 | INFO     | . payload setup = 9 s
[2025-06-04 02:20:59] 2025-06-04 06:20:39,798 | INFO     | . stage-in = 0 s
[2025-06-04 02:20:59] 2025-06-04 06:20:39,799 | INFO     | . payload execution = 3829 s
[2025-06-04 02:20:59] 2025-06-04 06:20:39,799 | INFO     | . stage-out = 0 s
[2025-06-04 02:20:59] 2025-06-04 06:20:39,799 | INFO     | . log creation = 0 s
[2025-06-04 02:20:59] 2025-06-04 06:20:39,799 | INFO     | ..............................
[2025-06-04 02:20:59] 2025-06-04 06:20:39,884 | INFO     | 
[2025-06-04 02:20:59] 2025-06-04 06:20:39,884 | INFO     | job summary report
[2025-06-04 02:20:59] 2025-06-04 06:20:39,884 | INFO     | --------------------------------------------------
[2025-06-04 02:20:59] 2025-06-04 06:20:39,884 | INFO     | PanDA job id: 6678286389
[2025-06-04 02:20:59] 2025-06-04 06:20:39,884 | INFO     | task id: 45006595
[2025-06-04 02:20:59] 2025-06-04 06:20:39,885 | INFO     | errors: (none)
[2025-06-04 02:20:59] 2025-06-04 06:20:39,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:20:59] 2025-06-04 06:20:39,885 | INFO     | pilot state: finished 
[2025-06-04 02:20:59] 2025-06-04 06:20:39,885 | INFO     | transexitcode: 0
[2025-06-04 02:20:59] 2025-06-04 06:20:39,885 | INFO     | exeerrorcode: 0
[2025-06-04 02:20:59] 2025-06-04 06:20:39,885 | INFO     | exeerrordiag: 
[2025-06-04 02:20:59] 2025-06-04 06:20:39,885 | INFO     | exitcode: 0
[2025-06-04 02:20:59] 2025-06-04 06:20:39,885 | INFO     | exitmsg: OK
[2025-06-04 02:20:59] 2025-06-04 06:20:39,885 | INFO     | cpuconsumptiontime: 41555 s
[2025-06-04 02:20:59] 2025-06-04 06:20:39,886 | INFO     | nevents: 400
[2025-06-04 02:20:59] 2025-06-04 06:20:39,886 | INFO     | neventsw: 0
[2025-06-04 02:20:59] 2025-06-04 06:20:39,886 | INFO     | pid: 24753
[2025-06-04 02:20:59] 2025-06-04 06:20:39,886 | INFO     | pgrp: 24753
[2025-06-04 02:20:59] 2025-06-04 06:20:39,886 | INFO     | corecount: 12
[2025-06-04 02:20:59] 2025-06-04 06:20:39,886 | INFO     | event service: False
[2025-06-04 02:20:59] 2025-06-04 06:20:39,886 | INFO     | sizes: {0: 2405070, 1: 2405212, 5: 2405418, 11: 2405474, 3843: 2431101, 3844: 2440042, 3847: 2440226, 3854: 2440396}
[2025-06-04 02:20:59] 2025-06-04 06:20:39,886 | INFO     | --------------------------------------------------
[2025-06-04 02:20:59] 2025-06-04 06:20:39,886 | INFO     | 
[2025-06-04 02:20:59] 2025-06-04 06:20:39,886 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:20:59] 2025-06-04 06:20:39,910 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,910 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,910 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,910 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,911 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,911 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,911 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,912 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,912 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:20:59] 2025-06-04 06:20:39,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,913 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:20:59] 2025-06-04 06:20:39,913 | INFO     | job 6678286389 has completed (purged errors)
[2025-06-04 02:20:59] 2025-06-04 06:20:39,913 | INFO     | overall cleanup function is called
[2025-06-04 02:20:59] 2025-06-04 06:20:40,921 | INFO     | --- collectZombieJob: --- 10, [24753]
[2025-06-04 02:20:59] 2025-06-04 06:20:40,922 | INFO     | zombie collector waiting for pid 24753
[2025-06-04 02:20:59] 2025-06-04 06:20:40,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:20:59] 2025-06-04 06:20:40,922 | INFO     | collected zombie processes
[2025-06-04 02:20:59] 2025-06-04 06:20:40,922 | INFO     | will attempt to kill all subprocesses of pid=24753
[2025-06-04 02:20:59] 2025-06-04 06:20:41,015 | INFO     | process IDs to be killed: [24753] (in reverse order)
[2025-06-04 02:20:59] 2025-06-04 06:20:41,068 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:20:59] 2025-06-04 06:20:41,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:20:59] 2025-06-04 06:20:41,071 | INFO     | did not find any defunct processes belonging to 24753
[2025-06-04 02:20:59] 2025-06-04 06:20:41,074 | INFO     | did not find any defunct processes belonging to 24753
[2025-06-04 02:20:59] 2025-06-04 06:20:41,074 | INFO     | ready for new job
[2025-06-04 02:20:59] 2025-06-04 06:20:41,074 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:20:59] 2025-06-04 06:20:41,075 | INFO     | **************************************
[2025-06-04 02:20:59] 2025-06-04 06:20:41,075 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:20:59] 2025-06-04 06:20:41,075 | INFO     | **************************************
[2025-06-04 02:20:59] 2025-06-04 06:20:41,076 | INFO     | 
[2025-06-04 02:20:59] 2025-06-04 06:20:41,076 | INFO     | architecture information:
[2025-06-04 02:20:59] 2025-06-04 06:20:41,077 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:20:59] 2025-06-04 06:20:41,091 | INFO     | cat /etc/os-release:
[2025-06-04 02:20:59] NAME="CentOS Linux"
[2025-06-04 02:20:59] VERSION="7 (Core)"
[2025-06-04 02:20:59] ID="centos"
[2025-06-04 02:20:59] ID_LIKE="rhel fedora"
[2025-06-04 02:20:59] VERSION_ID="7"
[2025-06-04 02:20:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:20:59] ANSI_COLOR="0;31"
[2025-06-04 02:20:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:20:59] HOME_URL="https://www.centos.org/"
[2025-06-04 02:20:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:20:59] 
[2025-06-04 02:20:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:20:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:20:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:20:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:20:59] 
[2025-06-04 02:20:59] 2025-06-04 06:20:41,091 | INFO     | **************************************
[2025-06-04 02:20:59] 2025-06-04 06:20:41,594 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:20:59] 2025-06-04 06:20:41,610 | INFO     | sufficient remaining disk space (29488054272 B)
[2025-06-04 02:20:59] 2025-06-04 06:20:41,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:20:59] 2025-06-04 06:20:41,611 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:20:59] 2025-06-04 06:20:41,611 | INFO     | update_server=False
[2025-06-04 02:20:59] 2025-06-04 06:20:41,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:20:59] 2025-06-04 06:20:41,612 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:20:59] 2025-06-04 06:20:41,641 | INFO     | all data control threads have been joined
[2025-06-04 02:20:59] 2025-06-04 06:20:41,655 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 02:20:59] 2025-06-04 06:20:41,656 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 02:20:59] 2025-06-04 06:20:41,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:20:59] 2025-06-04 06:20:41,656 | INFO     | will abort loop
[2025-06-04 02:20:59] 2025-06-04 06:20:41,982 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:20:59] 2025-06-04 06:20:41,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:20:59] 2025-06-04 06:20:41,982 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:20:59] 2025-06-04 06:20:42,156 | INFO     | all payload control threads have been joined
[2025-06-04 02:20:59] 2025-06-04 06:20:42,533 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:20:59] 2025-06-04 06:20:42,617 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:42,617 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:42,646 | INFO     | [data] control thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:42,661 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:42,704 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:42,715 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:43,075 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:43,076 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:43,088 | INFO     | all job control threads have been joined
[2025-06-04 02:20:59] 2025-06-04 06:20:43,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:20:59] 2025-06-04 06:20:43,161 | INFO     | [payload] control thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:43,322 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:44,052 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:44,093 | INFO     | [job] control thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:44,106 | INFO     | [job] validate thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:44,536 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:47,163 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:52,030 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:20:59] 2025-06-04 06:20:53,032 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:20:59] 2025-06-04 06:20:54,297 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139989218887488)>', '<ExcThread(monitor, started 139988914120448)>']
[2025-06-04 02:20:59] 2025-06-04 06:20:55,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:20:59] 2025-06-04 06:20:55,046 | INFO     | [monitor] control thread has ended
[2025-06-04 02:20:59] 2025-06-04 06:20:59,318 | INFO     | all workflow threads have been joined
[2025-06-04 02:20:59] 2025-06-04 06:20:59,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:20:59] 2025-06-04 06:20:59,318 | INFO     | traces error code: 0
[2025-06-04 02:20:59] 2025-06-04 06:20:59,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:20:59] 2025-06-04 06:20:59,406 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:20:59] 2025-06-04 06:20:59,410 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:20:59] 2025-06-04 06:20:59,414 [wrapper] pilotpid: 18348
[2025-06-04 02:20:59] 2025-06-04 06:20:59,418 [wrapper] Pilot exit status: 0
[2025-06-04 02:20:59] 2025-06-04 06:20:59,434 [wrapper] pandaids: 6678286389
[2025-06-04 02:20:59] 2025-06-04 06:20:59,470 [wrapper] cleanup supervisor_pilot 29241 18349
[2025-06-04 02:20:59] 2025-06-04 06:20:59,473 [wrapper] Test setup, not cleaning
[2025-06-04 02:20:59] 2025-06-04 06:20:59,477 [wrapper] apfmon messages muted
[2025-06-04 02:20:59] 2025-06-04 06:20:59,481 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:20:59] 2025-06-04 06:20:59,485 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:20:59]  *** Error codes and diagnostics ***
[2025-06-04 02:20:59]     "exeErrorCode": 0,
[2025-06-04 02:20:59]     "exeErrorDiag": "",
[2025-06-04 02:20:59]     "pilotErrorCode": 0,
[2025-06-04 02:20:59]     "pilotErrorDiag": "",
[2025-06-04 02:20:59]  *** Listing of results directory ***
[2025-06-04 02:20:59] total 388652
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 23:13 queuedata.json
[2025-06-04 02:20:59] -rwx------ 1 boincer umatlas     37140 Jun  3 23:13 runpilot2-wrapper.sh
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas       100 Jun  4 01:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:20:59] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 01:15 run_atlas
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas       105 Jun  4 01:15 job.xml
[2025-06-04 02:20:59] -rw-r--r-- 2 boincer umatlas 215811405 Jun  4 01:15 EVNT.45006593._002056.pool.root.1
[2025-06-04 02:20:59] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:15 start_atlas.sh
[2025-06-04 02:20:59] drwxrwx--x 2 boincer umatlas      4096 Jun  4 01:15 shared
[2025-06-04 02:20:59] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 01:15 input.tar.gz
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas         0 Jun  4 01:15 boinc_lockfile
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 01:15 pandaJob.out
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas    986745 Jun  4 01:16 agis_schedconf.cvmfs.json
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas   1603667 Jun  4 01:16 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:20:59] drwx------ 4 boincer umatlas      4096 Jun  4 01:16 pilot3
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas        95 Jun  4 02:19 pilot_heartbeat.json
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas 176858926 Jun  4 02:19 HITS.45006595._051317.pool.root.1
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas      5866 Jun  4 02:20 init_data.xml
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas       530 Jun  4 02:20 boinc_task_state.xml
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas      1049 Jun  4 02:20 memory_monitor_summary.json
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas    356864 Jun  4 02:20 log.45006595._051317.job.log.tgz.1
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas      7749 Jun  4 02:20 heartbeat.json
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 02:20 boinc_mmap_file
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas        27 Jun  4 02:20 wrapper_checkpoint.txt
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas      4611 Jun  4 02:20 pilotlog.txt
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas    377697 Jun  4 02:20 log.45006595._051317.job.log.1
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas       357 Jun  4 02:20 output.list
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas       620 Jun  4 02:20 runtime_log
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas    757760 Jun  4 02:20 result.tar.gz
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas      8656 Jun  4 02:20 runtime_log.err
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas       659 Jun  4 02:20 9lHLDmLktg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm91mKDm1mE26n.diag
[2025-06-04 02:20:59] -rw-r--r-- 1 boincer umatlas     21779 Jun  4 02:20 stderr.txt
[2025-06-04 02:20:59] HITS file was successfully produced:
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas 176858926 Jun  4 02:19 shared/HITS.pool.root.1
[2025-06-04 02:20:59]  *** Contents of shared directory: ***
[2025-06-04 02:20:59] total 384732
[2025-06-04 02:20:59] -rw-r--r-- 2 boincer umatlas 215811405 Jun  4 01:15 ATLAS.root_0
[2025-06-04 02:20:59] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:15 start_atlas.sh
[2025-06-04 02:20:59] -rw-r--r-- 2 boincer umatlas    508879 Jun  4 01:15 input.tar.gz
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas 176858926 Jun  4 02:19 HITS.pool.root.1
[2025-06-04 02:20:59] -rw------- 1 boincer umatlas    757760 Jun  4 02:20 result.tar.gz
02:21:01 (14710): run_atlas exited; CPU time 41528.904465
02:21:01 (14710): called boinc_finish(0)

</stderr_txt>
]]>

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