Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:14:33 (318858): wrapper (7.7.26015): starting
11:14:33 (318858): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 11:14:33] Arguments: --nthreads 12
[2025-06-04 11:14:33] Threads: 12
[2025-06-04 11:14:33] Checking for CVMFS
[2025-06-04 11:14:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 11:14:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 11:14:34] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 11:14:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 11:14:34] 2.12.7.0 3387806 2257 86628 146773 1 56 3091766 4097024 0 130560 0 2528873 99.994 524450 6445 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-06-04 11:14:34] CVMFS is ok
[2025-06-04 11:14:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 11:14:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 11:14:34] Further information can be found at the LHC@home message board.
[2025-06-04 11:14:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 11:14:34] Checking for apptainer binary...
[2025-06-04 11:14:34] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-04 11:14:34] apptainer is not installed, using version from CVMFS
[2025-06-04 11:14:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 11:14:34] pckelar5.cern.ch
[2025-06-04 11:14:34] apptainer works
[2025-06-04 11:14:34] Set ATHENA_PROC_NUMBER=12
[2025-06-04 11:14:34] Set ATHENA_CORE_NUMBER=12
[2025-06-04 11:14:34] Starting ATLAS job with PandaID=6678213962
[2025-06-04 11:14:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 12:15:14]  *** The last 200 lines of the pilot log: ***
[2025-06-04 12:15:14]  filesize=363792
[2025-06-04 12:15:14]  filetype=log
[2025-06-04 12:15:14]  guid=6a9352e3-2556-4783-a289-6648862b8a63
[2025-06-04 12:15:14]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 12:15:14]  is_altstaged=None
[2025-06-04 12:15:14]  is_tar=False
[2025-06-04 12:15:14]  lfn=log.45006595._048802.job.log.tgz.1
[2025-06-04 12:15:14]  mtime=0
[2025-06-04 12:15:14]  protocol_id=None
[2025-06-04 12:15:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 12:15:14]  replicas=None
[2025-06-04 12:15:14]  scope=mc23_13p6TeV
[2025-06-04 12:15:14]  status=None
[2025-06-04 12:15:14]  status_code=0
[2025-06-04 12:15:14]  storage_token=
[2025-06-04 12:15:14]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678213962/log.45006595._048802.job.log.tgz.1
[2025-06-04 12:15:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/71/log.45006595._048802.job.log.tgz.1
[2025-06-04 12:15:14]  workdir=None
[2025-06-04 12:15:14] ]
[2025-06-04 12:15:14] 2025-06-04 10:14:58,717 | INFO     | transferring file log.45006595._048802.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678213962/log.45006595._048802.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 12:15:14] 2025-06-04 10:14:58,718 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678213962/log.45006595._048802.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._048802.job
[2025-06-04 12:15:14] 2025-06-04 10:14:58,732 | INFO     | adding to output.list: log.45006595._048802.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/71/log.45006595._048802.job.log.tg
[2025-06-04 12:15:14] 2025-06-04 10:14:58,733 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 12:15:14] 2025-06-04 10:14:58,733 | INFO     | summary of transferred files:
[2025-06-04 12:15:14] 2025-06-04 10:14:58,733 | INFO     |  -- lfn=log.45006595._048802.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 12:15:14] 2025-06-04 10:14:58,733 | INFO     | stage-out finished correctly
[2025-06-04 12:15:14] 2025-06-04 10:14:58,799 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 12:15:14] 2025-06-04 10:14:59,174 | INFO     | monitor loop #272: job 0:6678213962 is in state 'finished'
[2025-06-04 12:15:14] 2025-06-04 10:14:59,175 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:15:14] 2025-06-04 10:15:00,078 | INFO     | job 6678213962 has state=finished
[2025-06-04 12:15:14] 2025-06-04 10:15:00,079 | INFO     | preparing for final server update for job 6678213962 in state='finished'
[2025-06-04 12:15:14] 2025-06-04 10:15:00,079 | INFO     | this job has now completed (state=finished)
[2025-06-04 12:15:14] 2025-06-04 10:15:00,079 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 12:15:14] 2025-06-04 10:15:00,079 | INFO     | log transfer has been attempted: DONE
[2025-06-04 12:15:14] 2025-06-04 10:15:00,080 | INFO     | job 6678213962 has finished - writing final server update
[2025-06-04 12:15:14] 2025-06-04 10:15:00,080 | INFO     | total number of processed events: 400 (read)
[2025-06-04 12:15:14] 2025-06-04 10:15:00,081 | INFO     | executing command: lscpu
[2025-06-04 12:15:14] 2025-06-04 10:15:00,100 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 12:15:14] 2025-06-04 10:15:01,677 | INFO     | monitor loop #273: job 0:6678213962 is in state 'finished'
[2025-06-04 12:15:14] 2025-06-04 10:15:01,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 12:15:14] 2025-06-04 10:15:03,730 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 12:15:14] 2025-06-04 10:15:03,731 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678213962/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 12:15:14] 2025-06-04 10:15:03,731 | INFO     | extracted standard info from prmon json
[2025-06-04 12:15:14] 2025-06-04 10:15:03,732 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 12:15:14] 2025-06-04 10:15:03,732 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 12:15:14] 2025-06-04 10:15:03,732 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 12:15:14] 2025-06-04 10:15:03,732 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 12:15:14] 2025-06-04 10:15:03,733 | INFO     | fitting pss+swap vs Time
[2025-06-04 12:15:14] 2025-06-04 10:15:03,733 | INFO     | sum of square deviations: 43584073.0
[2025-06-04 12:15:14] 2025-06-04 10:15:03,734 | INFO     | sum of deviations: 518165598.00000006
[2025-06-04 12:15:14] 2025-06-04 10:15:03,734 | INFO     | mean x: 1749030363.5
[2025-06-04 12:15:14] 2025-06-04 10:15:03,734 | INFO     | mean y: 2730181.730769231
[2025-06-04 12:15:14] 2025-06-04 10:15:03,734 | INFO     | -- intersect: -20791273265.88494
[2025-06-04 12:15:14] 2025-06-04 10:15:03,734 | INFO     | intersect: -20791273265.88494
[2025-06-04 12:15:14] 2025-06-04 10:15:03,734 | INFO     | chi2: 0.0013851605818786573
[2025-06-04 12:15:14] 2025-06-04 10:15:03,734 | INFO     | -- intersect: -20791273265.88494
[2025-06-04 12:15:14] 2025-06-04 10:15:03,734 | INFO     | current memory leak: 11.89 B/s (using 52 data points, chi2=0.00)
[2025-06-04 12:15:14] 2025-06-04 10:15:03,735 | INFO     | ..............................
[2025-06-04 12:15:14] 2025-06-04 10:15:03,735 | INFO     | . Timing measurements:
[2025-06-04 12:15:14] 2025-06-04 10:15:03,735 | INFO     | . get job = 0 s
[2025-06-04 12:15:14] 2025-06-04 10:15:03,735 | INFO     | . initial setup = 1 s
[2025-06-04 12:15:14] 2025-06-04 10:15:03,735 | INFO     | . payload setup = 5 s
[2025-06-04 12:15:14] 2025-06-04 10:15:03,735 | INFO     | . stage-in = 0 s
[2025-06-04 12:15:14] 2025-06-04 10:15:03,735 | INFO     | . payload execution = 3594 s
[2025-06-04 12:15:14] 2025-06-04 10:15:03,735 | INFO     | . stage-out = 0 s
[2025-06-04 12:15:14] 2025-06-04 10:15:03,735 | INFO     | . log creation = 0 s
[2025-06-04 12:15:14] 2025-06-04 10:15:03,735 | INFO     | ..............................
[2025-06-04 12:15:14] 2025-06-04 10:15:03,804 | INFO     | 
[2025-06-04 12:15:14] 2025-06-04 10:15:03,804 | INFO     | job summary report
[2025-06-04 12:15:14] 2025-06-04 10:15:03,804 | INFO     | --------------------------------------------------
[2025-06-04 12:15:14] 2025-06-04 10:15:03,804 | INFO     | PanDA job id: 6678213962
[2025-06-04 12:15:14] 2025-06-04 10:15:03,805 | INFO     | task id: 45006595
[2025-06-04 12:15:14] 2025-06-04 10:15:03,805 | INFO     | errors: (none)
[2025-06-04 12:15:14] 2025-06-04 10:15:03,805 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 12:15:14] 2025-06-04 10:15:03,805 | INFO     | pilot state: finished 
[2025-06-04 12:15:14] 2025-06-04 10:15:03,805 | INFO     | transexitcode: 0
[2025-06-04 12:15:14] 2025-06-04 10:15:03,805 | INFO     | exeerrorcode: 0
[2025-06-04 12:15:14] 2025-06-04 10:15:03,805 | INFO     | exeerrordiag: 
[2025-06-04 12:15:14] 2025-06-04 10:15:03,805 | INFO     | exitcode: 0
[2025-06-04 12:15:14] 2025-06-04 10:15:03,805 | INFO     | exitmsg: OK
[2025-06-04 12:15:14] 2025-06-04 10:15:03,805 | INFO     | cpuconsumptiontime: 38887 s
[2025-06-04 12:15:14] 2025-06-04 10:15:03,805 | INFO     | nevents: 400
[2025-06-04 12:15:14] 2025-06-04 10:15:03,805 | INFO     | neventsw: 0
[2025-06-04 12:15:14] 2025-06-04 10:15:03,806 | INFO     | pid: 329689
[2025-06-04 12:15:14] 2025-06-04 10:15:03,806 | INFO     | pgrp: 329689
[2025-06-04 12:15:14] 2025-06-04 10:15:03,806 | INFO     | corecount: 12
[2025-06-04 12:15:14] 2025-06-04 10:15:03,806 | INFO     | event service: False
[2025-06-04 12:15:14] 2025-06-04 10:15:03,806 | INFO     | sizes: {0: 2405133, 3: 2405339, 11: 2405367, 3603: 2439981, 3604: 2439981, 3608: 2440151}
[2025-06-04 12:15:14] 2025-06-04 10:15:03,806 | INFO     | --------------------------------------------------
[2025-06-04 12:15:14] 2025-06-04 10:15:03,806 | INFO     | 
[2025-06-04 12:15:14] 2025-06-04 10:15:03,806 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 12:15:14] 2025-06-04 10:15:03,824 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,825 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,825 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,825 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,825 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,825 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,825 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,825 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,825 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,825 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,826 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 12:15:14] 2025-06-04 10:15:03,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,826 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 12:15:14] 2025-06-04 10:15:03,827 | INFO     | job 6678213962 has completed (purged errors)
[2025-06-04 12:15:14] 2025-06-04 10:15:03,827 | INFO     | overall cleanup function is called
[2025-06-04 12:15:14] 2025-06-04 10:15:04,834 | INFO     | --- collectZombieJob: --- 10, [329689]
[2025-06-04 12:15:14] 2025-06-04 10:15:04,834 | INFO     | zombie collector waiting for pid 329689
[2025-06-04 12:15:14] 2025-06-04 10:15:04,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 12:15:14] 2025-06-04 10:15:04,834 | INFO     | collected zombie processes
[2025-06-04 12:15:14] 2025-06-04 10:15:04,834 | INFO     | will attempt to kill all subprocesses of pid=329689
[2025-06-04 12:15:14] 2025-06-04 10:15:04,911 | INFO     | process IDs to be killed: [329689] (in reverse order)
[2025-06-04 12:15:14] 2025-06-04 10:15:04,946 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 12:15:14] 2025-06-04 10:15:04,946 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 12:15:14] 2025-06-04 10:15:04,949 | INFO     | did not find any defunct processes belonging to 329689
[2025-06-04 12:15:14] 2025-06-04 10:15:04,951 | INFO     | did not find any defunct processes belonging to 329689
[2025-06-04 12:15:14] 2025-06-04 10:15:04,951 | INFO     | ready for new job
[2025-06-04 12:15:14] 2025-06-04 10:15:04,951 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 12:15:14] 2025-06-04 10:15:04,952 | INFO     | **************************************
[2025-06-04 12:15:14] 2025-06-04 10:15:04,952 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 12:15:14] 2025-06-04 10:15:04,952 | INFO     | **************************************
[2025-06-04 12:15:14] 2025-06-04 10:15:04,953 | INFO     | 
[2025-06-04 12:15:14] 2025-06-04 10:15:04,953 | INFO     | architecture information:
[2025-06-04 12:15:14] 2025-06-04 10:15:04,953 | INFO     | executing command: cat /etc/os-release
[2025-06-04 12:15:14] 2025-06-04 10:15:04,964 | INFO     | cat /etc/os-release:
[2025-06-04 12:15:14] NAME="CentOS Linux"
[2025-06-04 12:15:14] VERSION="7 (Core)"
[2025-06-04 12:15:14] ID="centos"
[2025-06-04 12:15:14] ID_LIKE="rhel fedora"
[2025-06-04 12:15:14] VERSION_ID="7"
[2025-06-04 12:15:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 12:15:14] ANSI_COLOR="0;31"
[2025-06-04 12:15:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 12:15:14] HOME_URL="https://www.centos.org/"
[2025-06-04 12:15:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 12:15:14] 
[2025-06-04 12:15:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 12:15:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 12:15:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 12:15:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 12:15:14] 
[2025-06-04 12:15:14] 2025-06-04 10:15:04,964 | INFO     | **************************************
[2025-06-04 12:15:14] 2025-06-04 10:15:05,467 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 12:15:14] 2025-06-04 10:15:05,478 | INFO     | sufficient remaining disk space (1816324472832 B)
[2025-06-04 12:15:14] 2025-06-04 10:15:05,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 12:15:14] 2025-06-04 10:15:05,478 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 12:15:14] 2025-06-04 10:15:05,479 | INFO     | update_server=False
[2025-06-04 12:15:14] 2025-06-04 10:15:05,479 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 12:15:14] 2025-06-04 10:15:05,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:15:14] 2025-06-04 10:15:05,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 12:15:14] 2025-06-04 10:15:05,479 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 12:15:14] 2025-06-04 10:15:05,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 12:15:14] 2025-06-04 10:15:05,480 | INFO     | aborting loop
[2025-06-04 12:15:14] 2025-06-04 10:15:05,480 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 12:15:14] 2025-06-04 10:15:05,481 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 12:15:14] 2025-06-04 10:15:05,481 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 12:15:14] 2025-06-04 10:15:06,020 | INFO     | all data control threads have been joined
[2025-06-04 12:15:14] 2025-06-04 10:15:06,083 | INFO     | all job control threads have been joined
[2025-06-04 12:15:14] 2025-06-04 10:15:06,484 | INFO     | [job] retrieve thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:06,485 | INFO     | [job] queue monitor thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:06,486 | INFO     | [job] job monitor thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:06,493 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:06,622 | INFO     | all payload control threads have been joined
[2025-06-04 12:15:14] 2025-06-04 10:15:06,640 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:06,719 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:06,809 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 12:15:14] 2025-06-04 10:15:06,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:07,025 | INFO     | [data] control thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:07,088 | INFO     | [job] control thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:07,199 | INFO     | [payload] validate_post thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:07,276 | INFO     | [payload] failed_post thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:07,626 | INFO     | [payload] control thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:07,868 | INFO     | [job] validate thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:07,954 | INFO     | [data] copytool_in thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:08,815 | INFO     | [data] copytool_out thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:09,486 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 12:15:14] 2025-06-04 10:15:09,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140631955056448)>', '<ExcThread(monitor, started 140630894298880)>']
[2025-06-04 12:15:14] 2025-06-04 10:15:10,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 12:15:14] 2025-06-04 10:15:10,507 | INFO     | [monitor] control thread has ended
[2025-06-04 12:15:14] 2025-06-04 10:15:14,561 | INFO     | all workflow threads have been joined
[2025-06-04 12:15:14] 2025-06-04 10:15:14,561 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 12:15:14] 2025-06-04 10:15:14,561 | INFO     | traces error code: 0
[2025-06-04 12:15:14] 2025-06-04 10:15:14,561 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 12:15:14] 2025-06-04 10:15:14,629 [wrapper] ==== pilot stdout END ====
[2025-06-04 12:15:14] 2025-06-04 10:15:14,632 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 12:15:14] 2025-06-04 10:15:14,634 [wrapper] pilotpid: 322542
[2025-06-04 12:15:14] 2025-06-04 10:15:14,636 [wrapper] Pilot exit status: 0
[2025-06-04 12:15:14] 2025-06-04 10:15:14,644 [wrapper] pandaids: 6678213962
[2025-06-04 12:15:14] 2025-06-04 10:15:14,662 [wrapper] cleanup supervisor_pilot  345720 322543
[2025-06-04 12:15:14] 2025-06-04 10:15:14,664 [wrapper] Test setup, not cleaning
[2025-06-04 12:15:14] 2025-06-04 10:15:14,666 [wrapper] apfmon messages muted
[2025-06-04 12:15:14] 2025-06-04 10:15:14,668 [wrapper] ==== wrapper stdout END ====
[2025-06-04 12:15:14] 2025-06-04 10:15:14,670 [wrapper] ==== wrapper stderr END ====
[2025-06-04 12:15:14]  *** Error codes and diagnostics ***
[2025-06-04 12:15:14]     "exeErrorCode": 0,
[2025-06-04 12:15:14]     "exeErrorDiag": "",
[2025-06-04 12:15:14]     "pilotErrorCode": 0,
[2025-06-04 12:15:14]     "pilotErrorDiag": "",
[2025-06-04 12:15:14]  *** Listing of results directory ***
[2025-06-04 12:15:14] total 389380
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc      5111 Jun  4 02:25 queuedata.json
[2025-06-04 12:15:14] -rwx------ 1 boinc boinc     37140 Jun  4 02:27 runpilot2-wrapper.sh
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc       100 Jun  4 11:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 12:15:14] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 11:14 run_atlas
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc       105 Jun  4 11:14 job.xml
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc      6254 Jun  4 11:14 init_data.xml
[2025-06-04 12:15:14] -rw-r--r-- 2 boinc boinc 214128854 Jun  4 11:14 EVNT.45006593._001957.pool.root.1
[2025-06-04 12:15:14] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:14 start_atlas.sh
[2025-06-04 12:15:14] drwxrwx--x 2 boinc boinc        68 Jun  4 11:14 shared
[2025-06-04 12:15:14] -rw-r--r-- 2 boinc boinc    508886 Jun  4 11:14 input.tar.gz
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc         0 Jun  4 11:14 boinc_lockfile
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc      2524 Jun  4 11:14 pandaJob.out
[2025-06-04 12:15:14] -rw------- 1 boinc boinc    986774 Jun  4 11:14 agis_schedconf.cvmfs.json
[2025-06-04 12:15:14] -rw------- 1 boinc boinc   1603667 Jun  4 11:14 agis_ddmendpoints.agis.ALL.json
[2025-06-04 12:15:14] drwx------ 4 boinc boinc      4096 Jun  4 11:14 pilot3
[2025-06-04 12:15:14] -rw------- 1 boinc boinc        95 Jun  4 12:14 pilot_heartbeat.json
[2025-06-04 12:15:14] -rw------- 1 boinc boinc 179342337 Jun  4 12:14 HITS.45006595._048802.pool.root.1
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc       529 Jun  4 12:14 boinc_task_state.xml
[2025-06-04 12:15:14] -rw------- 1 boinc boinc      1020 Jun  4 12:14 memory_monitor_summary.json
[2025-06-04 12:15:14] -rw------- 1 boinc boinc    363792 Jun  4 12:14 log.45006595._048802.job.log.tgz.1
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc      8192 Jun  4 12:15 boinc_mmap_file
[2025-06-04 12:15:14] -rw------- 1 boinc boinc      7691 Jun  4 12:15 heartbeat.json
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc        27 Jun  4 12:15 wrapper_checkpoint.txt
[2025-06-04 12:15:14] -rw------- 1 boinc boinc      4478 Jun  4 12:15 pilotlog.txt
[2025-06-04 12:15:14] -rw------- 1 boinc boinc    355963 Jun  4 12:15 log.45006595._048802.job.log.1
[2025-06-04 12:15:14] -rw------- 1 boinc boinc       357 Jun  4 12:15 output.list
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc       620 Jun  4 12:15 runtime_log
[2025-06-04 12:15:14] -rw------- 1 boinc boinc    737280 Jun  4 12:15 result.tar.gz
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc      8683 Jun  4 12:15 runtime_log.err
[2025-06-04 12:15:14] -rw------- 1 boinc boinc       655 Jun  4 12:15 AtPODmV9qg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtLaKDmMR2YMn.diag
[2025-06-04 12:15:14] -rw-r--r-- 1 boinc boinc     21224 Jun  4 12:15 stderr.txt
[2025-06-04 12:15:14] HITS file was successfully produced:
[2025-06-04 12:15:14] -rw------- 1 boinc boinc 179342337 Jun  4 12:14 shared/HITS.pool.root.1
[2025-06-04 12:15:14]  *** Contents of shared directory: ***
[2025-06-04 12:15:14] total 385488
[2025-06-04 12:15:14] -rw-r--r-- 2 boinc boinc 214128854 Jun  4 11:14 ATLAS.root_0
[2025-06-04 12:15:14] -rw-r--r-- 2 boinc boinc     15093 Jun  4 11:14 start_atlas.sh
[2025-06-04 12:15:14] -rw-r--r-- 2 boinc boinc    508886 Jun  4 11:14 input.tar.gz
[2025-06-04 12:15:14] -rw------- 1 boinc boinc 179342337 Jun  4 12:14 HITS.pool.root.1
[2025-06-04 12:15:14] -rw------- 1 boinc boinc    737280 Jun  4 12:15 result.tar.gz
12:15:15 (318858): run_atlas exited; CPU time 38903.480536
12:15:15 (318858): called boinc_finish(0)

</stderr_txt>
]]>

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