Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:50:53 (4933): wrapper (7.7.26015): starting
17:50:53 (4933): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 17:50:53] Arguments: --nthreads 8
[2025-06-04 17:50:53] Threads: 8
[2025-06-04 17:50:53] Checking for CVMFS
[2025-06-04 17:50:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:50:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:50:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:50:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:50:56] 2.11.2.0 20340 33577 94944 146786 1 16 18712047 25165824 4294 130560 0 17430450 99.786 18488459 2470 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 17:50:56] CVMFS is ok
[2025-06-04 17:50:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:50:56] Checking for apptainer binary...
[2025-06-04 17:50:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:50:56] Running /usr/bin/apptainer --version
[2025-06-04 17:50:56] apptainer version 1.3.2-1.el7
[2025-06-04 17:50:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:51:04] cg-vwn373.simple-grid.lan
[2025-06-04 17:51:04] apptainer works
[2025-06-04 17:51:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 17:51:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 17:51:04] Starting ATLAS job with PandaID=6667102913
[2025-06-04 17:51:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 23:28:22]  *** The last 200 lines of the pilot log: ***
[2025-06-04 23:28:22] 2025-06-04 21:27:49,653 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 23:28:22] 2025-06-04 21:27:49,659 | INFO     | fitting pss+swap vs Time
[2025-06-04 23:28:22] 2025-06-04 21:27:49,660 | INFO     | sum of square deviations: 10065751520.0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,664 | INFO     | sum of deviations: 175374201632.0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,664 | INFO     | mean x: 1749062656.0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,664 | INFO     | mean y: 2433051.8463949845
[2025-06-04 23:28:22] 2025-06-04 21:27:49,664 | INFO     | -- intersect: -30471244575.78746
[2025-06-04 23:28:22] 2025-06-04 21:27:49,664 | INFO     | intersect: -30471244575.78746
[2025-06-04 23:28:22] 2025-06-04 21:27:49,665 | INFO     | chi2: 6.988410331560025
[2025-06-04 23:28:22] 2025-06-04 21:27:49,666 | INFO     | sum of square deviations: 9599817202.5
[2025-06-04 23:28:22] 2025-06-04 21:27:49,669 | INFO     | sum of deviations: 193285058567.5
[2025-06-04 23:28:22] 2025-06-04 21:27:49,669 | INFO     | mean x: 1749062503.5
[2025-06-04 23:28:22] 2025-06-04 21:27:49,669 | INFO     | mean y: 2438826.506369427
[2025-06-04 23:28:22] 2025-06-04 21:27:49,669 | INFO     | -- intersect: -35213611781.1214
[2025-06-04 23:28:22] 2025-06-04 21:27:49,669 | INFO     | intersect: -35213611781.1214
[2025-06-04 23:28:22] 2025-06-04 21:27:49,670 | INFO     | chi2: 6.253164117168358
[2025-06-04 23:28:22] 2025-06-04 21:27:49,670 | INFO     | current chi2=6.253164117168358 (change=10.52093651500767 %)
[2025-06-04 23:28:22] 2025-06-04 21:27:49,670 | INFO     | right removable region: 313
[2025-06-04 23:28:22] 2025-06-04 21:27:49,671 | INFO     | sum of square deviations: 9599817202.5
[2025-06-04 23:28:22] 2025-06-04 21:27:49,674 | INFO     | sum of deviations: 63558005476.000015
[2025-06-04 23:28:22] 2025-06-04 21:27:49,674 | INFO     | mean x: 1749062808.5
[2025-06-04 23:28:22] 2025-06-04 21:27:49,674 | INFO     | mean y: 2469631.738853503
[2025-06-04 23:28:22] 2025-06-04 21:27:49,674 | INFO     | -- intersect: -11577640824.068647
[2025-06-04 23:28:22] 2025-06-04 21:27:49,674 | INFO     | intersect: -11577640824.068647
[2025-06-04 23:28:22] 2025-06-04 21:27:49,675 | INFO     | chi2: 2.1811188342789065
[2025-06-04 23:28:22] 2025-06-04 21:27:49,675 | INFO     | current chi2=2.1811188342789065 (change=68.78948529354581 %)
[2025-06-04 23:28:22] 2025-06-04 21:27:49,676 | INFO     | sum of square deviations: 9148487810.0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,679 | INFO     | sum of deviations: 9226526696.000004
[2025-06-04 23:28:22] 2025-06-04 21:27:49,679 | INFO     | mean x: 1749062961.0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,679 | INFO     | mean y: 2487905.640776699
[2025-06-04 23:28:22] 2025-06-04 21:27:49,679 | INFO     | -- intersect: -1761494999.2729166
[2025-06-04 23:28:22] 2025-06-04 21:27:49,679 | INFO     | intersect: -1761494999.2729166
[2025-06-04 23:28:22] 2025-06-04 21:27:49,680 | INFO     | chi2: 0.8393114472853931
[2025-06-04 23:28:22] 2025-06-04 21:27:49,680 | INFO     | current chi2=0.8393114472853931 (change=61.51922425799988 %)
[2025-06-04 23:28:22] 2025-06-04 21:27:49,680 | INFO     | sum of square deviations: 8711530780.0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,683 | INFO     | sum of deviations: -1309021143.0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,684 | INFO     | mean x: 1749063113.5
[2025-06-04 23:28:22] 2025-06-04 21:27:49,684 | INFO     | mean y: 2491577.2039473685
[2025-06-04 23:28:22] 2025-06-04 21:27:49,684 | INFO     | -- intersect: 265311126.81390798
[2025-06-04 23:28:22] 2025-06-04 21:27:49,684 | INFO     | intersect: 265311126.81390798
[2025-06-04 23:28:22] 2025-06-04 21:27:49,685 | INFO     | chi2: 0.7956591965509365
[2025-06-04 23:28:22] 2025-06-04 21:27:49,685 | INFO     | current chi2=0.7956591965509365 (change=5.200959771922826 %)
[2025-06-04 23:28:22] 2025-06-04 21:27:49,685 | INFO     | left removable region: 30
[2025-06-04 23:28:22] 2025-06-04 21:27:49,685 | INFO     | sum of square deviations: 7028008982.0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,688 | INFO     | sum of deviations: 9822855924.999998
[2025-06-04 23:28:22] 2025-06-04 21:27:49,688 | INFO     | mean x: 1749063388.0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,688 | INFO     | mean y: 2501881.2014134275
[2025-06-04 23:28:22] 2025-06-04 21:27:49,688 | INFO     | -- intersect: -2442116176.0633817
[2025-06-04 23:28:22] 2025-06-04 21:27:49,689 | INFO     | intersect: -2442116176.0633817
[2025-06-04 23:28:22] 2025-06-04 21:27:49,689 | INFO     | chi2: 0.0008756772963654626
[2025-06-04 23:28:22] 2025-06-04 21:27:49,689 | INFO     | -- intersect: -2442116176.0633817
[2025-06-04 23:28:22] 2025-06-04 21:27:49,689 | INFO     | current memory leak: 1.40 B/s (using 283 data points, chi2=0.00)
[2025-06-04 23:28:22] 2025-06-04 21:27:49,690 | INFO     | ..............................
[2025-06-04 23:28:22] 2025-06-04 21:27:49,690 | INFO     | . Timing measurements:
[2025-06-04 23:28:22] 2025-06-04 21:27:49,691 | INFO     | . get job = 0 s
[2025-06-04 23:28:22] 2025-06-04 21:27:49,691 | INFO     | . initial setup = 2 s
[2025-06-04 23:28:22] 2025-06-04 21:27:49,691 | INFO     | . payload setup = 167 s
[2025-06-04 23:28:22] 2025-06-04 21:27:49,691 | INFO     | . stage-in = 0 s
[2025-06-04 23:28:22] 2025-06-04 21:27:49,691 | INFO     | . payload execution = 19544 s
[2025-06-04 23:28:22] 2025-06-04 21:27:49,691 | INFO     | . stage-out = 6 s
[2025-06-04 23:28:22] 2025-06-04 21:27:49,691 | INFO     | . log creation = 1 s
[2025-06-04 23:28:22] 2025-06-04 21:27:49,691 | INFO     | ..............................
[2025-06-04 23:28:22] 2025-06-04 21:27:49,824 | INFO     | 
[2025-06-04 23:28:22] 2025-06-04 21:27:49,824 | INFO     | job summary report
[2025-06-04 23:28:22] 2025-06-04 21:27:49,824 | INFO     | --------------------------------------------------
[2025-06-04 23:28:22] 2025-06-04 21:27:49,824 | INFO     | PanDA job id: 6667102913
[2025-06-04 23:28:22] 2025-06-04 21:27:49,824 | INFO     | task id: 44871837
[2025-06-04 23:28:22] 2025-06-04 21:27:49,824 | INFO     | errors: (none)
[2025-06-04 23:28:22] 2025-06-04 21:27:49,825 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 23:28:22] 2025-06-04 21:27:49,825 | INFO     | pilot state: finished 
[2025-06-04 23:28:22] 2025-06-04 21:27:49,825 | INFO     | transexitcode: 0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,825 | INFO     | exeerrorcode: 0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,825 | INFO     | exeerrordiag: 
[2025-06-04 23:28:22] 2025-06-04 21:27:49,825 | INFO     | exitcode: 0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,825 | INFO     | exitmsg: OK
[2025-06-04 23:28:22] 2025-06-04 21:27:49,825 | INFO     | cpuconsumptiontime: 73943 s
[2025-06-04 23:28:22] 2025-06-04 21:27:49,825 | INFO     | nevents: 400
[2025-06-04 23:28:22] 2025-06-04 21:27:49,825 | INFO     | neventsw: 0
[2025-06-04 23:28:22] 2025-06-04 21:27:49,825 | INFO     | pid: 18631
[2025-06-04 23:28:22] 2025-06-04 21:27:49,825 | INFO     | pgrp: 18631
[2025-06-04 23:28:22] 2025-06-04 21:27:49,826 | INFO     | corecount: 8
[2025-06-04 23:28:22] 2025-06-04 21:27:49,826 | INFO     | event service: False
[2025-06-04 23:28:22] 2025-06-04 21:27:49,826 | INFO     | sizes: {0: 2396562, 1: 2397248, 2: 2397447, 13: 2397447, 23: 2397503, 34: 2397531, 45: 2397687, 56: 2397715, 66: 2397743, 77: 2397771, 88: 2397827, 92: 2398341, 98
[2025-06-04 23:28:22] 2025-06-04 21:27:49,826 | INFO     | --------------------------------------------------
[2025-06-04 23:28:22] 2025-06-04 21:27:49,826 | INFO     | 
[2025-06-04 23:28:22] 2025-06-04 21:27:49,826 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-06-04 23:28:22] 2025-06-04 21:27:50,462 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,462 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,462 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,462 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,463 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,463 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,463 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,463 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,463 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,463 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,463 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,464 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 23:28:22] 2025-06-04 21:27:50,464 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,464 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 23:28:22] 2025-06-04 21:27:50,464 | INFO     | job 6667102913 has completed (purged errors)
[2025-06-04 23:28:22] 2025-06-04 21:27:50,464 | INFO     | overall cleanup function is called
[2025-06-04 23:28:22] 2025-06-04 21:27:51,339 | INFO     | PID=10769 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 23:28:22] 2025-06-04 21:27:51,339 | INFO     | .. there are 9 such processes running
[2025-06-04 23:28:22] 2025-06-04 21:27:51,472 | INFO     | --- collectZombieJob: --- 10, [18631]
[2025-06-04 23:28:22] 2025-06-04 21:27:51,473 | INFO     | zombie collector waiting for pid 18631
[2025-06-04 23:28:22] 2025-06-04 21:27:51,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 23:28:22] 2025-06-04 21:27:51,473 | INFO     | collected zombie processes
[2025-06-04 23:28:22] 2025-06-04 21:27:51,473 | INFO     | will attempt to kill all subprocesses of pid=18631
[2025-06-04 23:28:22] 2025-06-04 21:27:51,644 | INFO     | process IDs to be killed: [18631] (in reverse order)
[2025-06-04 23:28:22] 2025-06-04 21:27:52,780 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 23:28:22] 2025-06-04 21:27:52,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 23:28:22] 2025-06-04 21:27:52,784 | INFO     | did not find any defunct processes belonging to 18631
[2025-06-04 23:28:22] 2025-06-04 21:27:52,787 | INFO     | did not find any defunct processes belonging to 18631
[2025-06-04 23:28:22] 2025-06-04 21:27:52,787 | INFO     | ready for new job
[2025-06-04 23:28:22] 2025-06-04 21:27:52,788 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 23:28:22] 2025-06-04 21:27:52,790 | INFO     | **************************************
[2025-06-04 23:28:22] 2025-06-04 21:27:52,790 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 23:28:22] 2025-06-04 21:27:52,790 | INFO     | **************************************
[2025-06-04 23:28:22] 2025-06-04 21:27:52,790 | INFO     | 
[2025-06-04 23:28:22] 2025-06-04 21:27:52,791 | INFO     | pilot is running in a VM
[2025-06-04 23:28:22] 2025-06-04 21:27:52,791 | INFO     | architecture information:
[2025-06-04 23:28:22] 2025-06-04 21:27:52,810 | INFO     | executing command: cat /etc/os-release
[2025-06-04 23:28:22] 2025-06-04 21:27:53,071 | INFO     | cat /etc/os-release:
[2025-06-04 23:28:22] NAME="CentOS Linux"
[2025-06-04 23:28:22] VERSION="7 (Core)"
[2025-06-04 23:28:22] ID="centos"
[2025-06-04 23:28:22] ID_LIKE="rhel fedora"
[2025-06-04 23:28:22] VERSION_ID="7"
[2025-06-04 23:28:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 23:28:22] ANSI_COLOR="0;31"
[2025-06-04 23:28:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 23:28:22] HOME_URL="https://www.centos.org/"
[2025-06-04 23:28:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 23:28:22] 
[2025-06-04 23:28:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 23:28:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 23:28:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 23:28:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 23:28:22] 
[2025-06-04 23:28:22] 2025-06-04 21:27:53,071 | INFO     | **************************************
[2025-06-04 23:28:22] 2025-06-04 21:27:53,575 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-06-04 23:28:22] 2025-06-04 21:27:53,865 | INFO     | sufficient remaining disk space (496216571904 B)
[2025-06-04 23:28:22] 2025-06-04 21:27:53,866 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 23:28:22] 2025-06-04 21:27:53,866 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 23:28:22] 2025-06-04 21:27:53,866 | INFO     | update_server=False
[2025-06-04 23:28:22] 2025-06-04 21:27:53,866 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 23:28:22] 2025-06-04 21:27:53,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 23:28:22] 2025-06-04 21:27:53,866 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 23:28:22] 2025-06-04 21:27:53,874 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 23:28:22] 2025-06-04 21:27:53,874 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 23:28:22] 2025-06-04 21:27:53,874 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 23:28:22] 2025-06-04 21:27:54,328 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 23:28:22] 2025-06-04 21:27:54,329 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 23:28:22] 2025-06-04 21:27:54,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:28:22] 2025-06-04 21:27:54,329 | INFO     | will abort loop
[2025-06-04 23:28:22] 2025-06-04 21:27:54,419 | INFO     | all job control threads have been joined
[2025-06-04 23:28:22] 2025-06-04 21:27:54,496 | INFO     | all data control threads have been joined
[2025-06-04 23:28:22] 2025-06-04 21:27:54,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 23:28:22] 2025-06-04 21:27:54,845 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 23:28:22] 2025-06-04 21:27:54,872 | INFO     | [job] retrieve thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:54,948 | INFO     | all payload control threads have been joined
[2025-06-04 23:28:22] 2025-06-04 21:27:54,952 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:55,025 | INFO     | [data] copytool_in thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:55,076 | INFO     | [payload] validate_post thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:55,336 | INFO     | [job] job monitor thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:55,426 | INFO     | [job] control thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:55,503 | INFO     | [data] control thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:55,598 | INFO     | [job] validate thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:55,616 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:55,673 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:55,744 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:55,851 | INFO     | [job] queue monitor thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:55,881 | INFO     | [data] copytool_out thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:55,954 | INFO     | [payload] control thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:56,447 | INFO     | [payload] failed_post thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:58,787 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 23:28:22] 2025-06-04 21:27:59,284 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140061910509376)>', '<ExcThread(monitor, started 140061467195136)>']
[2025-06-04 23:28:22] 2025-06-04 21:27:59,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 23:28:22] 2025-06-04 21:27:59,910 | INFO     | [monitor] control thread has ended
[2025-06-04 23:28:22] 2025-06-04 21:28:04,310 | INFO     | all workflow threads have been joined
[2025-06-04 23:28:22] 2025-06-04 21:28:04,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 23:28:22] 2025-06-04 21:28:04,311 | INFO     | traces error code: 0
[2025-06-04 23:28:22] 2025-06-04 21:28:04,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 23:28:22] 2025-06-04 21:28:04,644 [wrapper] ==== pilot stdout END ====
[2025-06-04 23:28:22] 2025-06-04 21:28:04,710 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 23:28:22] 2025-06-04 21:28:04,759 [wrapper] pilotpid: 10769
[2025-06-04 23:28:22] 2025-06-04 21:28:04,849 [wrapper] Pilot exit status: 0
[2025-06-04 23:28:22] 2025-06-04 21:28:05,184 [wrapper] pandaids: 6667102913
[2025-06-04 23:28:22] 2025-06-04 21:28:05,244 [wrapper] cleanup supervisor_pilot 24102 10771
[2025-06-04 23:28:22] 2025-06-04 21:28:05,249 [wrapper] Test setup, not cleaning
[2025-06-04 23:28:22] 2025-06-04 21:28:05,269 [wrapper] apfmon messages muted
[2025-06-04 23:28:22] 2025-06-04 21:28:05,275 [wrapper] ==== wrapper stdout END ====
[2025-06-04 23:28:22] 2025-06-04 21:28:05,278 [wrapper] ==== wrapper stderr END ====
[2025-06-04 23:28:22]  *** Error codes and diagnostics ***
[2025-06-04 23:28:22]     "exeErrorCode": 0,
[2025-06-04 23:28:22]     "exeErrorDiag": "",
[2025-06-04 23:28:22]     "pilotErrorCode": 0,
[2025-06-04 23:28:22]     "pilotErrorDiag": "",
[2025-06-04 23:28:22]  *** Listing of results directory ***
[2025-06-04 23:28:22] total 425904
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc    495897 May 27 15:43 pilot3.tar.gz
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc      5111 May 27 16:35 queuedata.json
[2025-06-04 23:28:22] -rwx------. 1 boinc boinc     37140 May 27 16:35 runpilot2-wrapper.sh
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc       100 Jun  4 17:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 23:28:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 17:50 run_atlas
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc       105 Jun  4 17:50 job.xml
[2025-06-04 23:28:22] -rw-r--r--. 2 boinc boinc 224440295 Jun  4 17:50 EVNT.44871834._002710.pool.root.1
[2025-06-04 23:28:22] drwxrwx--x. 2 boinc boinc        68 Jun  4 17:50 shared
[2025-06-04 23:28:22] -rw-r--r--. 2 boinc boinc    508875 Jun  4 17:50 input.tar.gz
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc      6393 Jun  4 17:50 init_data.xml
[2025-06-04 23:28:22] -rw-r--r--. 2 boinc boinc     15093 Jun  4 17:50 start_atlas.sh
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc         0 Jun  4 17:50 boinc_lockfile
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc      2558 Jun  4 17:51 pandaJob.out
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc    990989 Jun  4 17:54 agis_schedconf.cvmfs.json
[2025-06-04 23:28:22] drwx------. 4 boinc boinc      4096 Jun  4 17:54 pilot3
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc 203582061 Jun  4 23:24 HITS.44871837._068897.pool.root.1
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc       531 Jun  4 23:25 boinc_task_state.xml
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc      1017 Jun  4 23:26 memory_monitor_summary.json
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc   1598969 Jun  4 23:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc    426076 Jun  4 23:26 log.44871837._068897.job.log.tgz.1
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc        95 Jun  4 23:27 pilot_heartbeat.json
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc      7688 Jun  4 23:27 heartbeat.json
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc      4726 Jun  4 23:28 pilotlog.txt
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc   1712504 Jun  4 23:28 log.44871837._068897.job.log.1
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc       357 Jun  4 23:28 output.list
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc       620 Jun  4 23:28 runtime_log
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc   2160640 Jun  4 23:28 result.tar.gz
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc      8673 Jun  4 23:28 runtime_log.err
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc       657 Jun  4 23:28 IrbKDmNaAe7n9Rq4apOajLDm4fhM0noT9bVof3QYDm7wRKDm9pPvZm.diag
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc      8192 Jun  4 23:28 boinc_mmap_file
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc        28 Jun  4 23:28 wrapper_checkpoint.txt
[2025-06-04 23:28:22] -rw-r--r--. 1 boinc boinc     20659 Jun  4 23:28 stderr.txt
[2025-06-04 23:28:22] HITS file was successfully produced:
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc 203582061 Jun  4 23:24 shared/HITS.pool.root.1
[2025-06-04 23:28:22]  *** Contents of shared directory: ***
[2025-06-04 23:28:22] total 420620
[2025-06-04 23:28:22] -rw-r--r--. 2 boinc boinc 224440295 Jun  4 17:50 ATLAS.root_0
[2025-06-04 23:28:22] -rw-r--r--. 2 boinc boinc    508875 Jun  4 17:50 input.tar.gz
[2025-06-04 23:28:22] -rw-r--r--. 2 boinc boinc     15093 Jun  4 17:50 start_atlas.sh
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc 203582061 Jun  4 23:24 HITS.pool.root.1
[2025-06-04 23:28:22] -rw-------. 1 boinc boinc   2160640 Jun  4 23:28 result.tar.gz
23:28:24 (4933): run_atlas exited; CPU time 74232.098503
23:28:24 (4933): called boinc_finish(0)

</stderr_txt>
]]>

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