Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:39:12 (11208): wrapper (7.7.26015): starting
15:39:12 (11208): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 15:39:12] Arguments: --nthreads 8
[2025-06-04 15:39:12] Threads: 8
[2025-06-04 15:39:12] Checking for CVMFS
[2025-06-04 15:39:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:39:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:39:13] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:39:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:39:14] 2.11.2.0 5342 33295 92420 146781 0 16 22496033 25165825 3911 130560 0 17131909 99.802 19731360 2191 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 15:39:14] CVMFS is ok
[2025-06-04 15:39:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:39:14] Checking for apptainer binary...
[2025-06-04 15:39:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:39:14] Running /usr/bin/apptainer --version
[2025-06-04 15:39:14] apptainer version 1.3.2-1.el7
[2025-06-04 15:39:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:39:26] cg-vwn390.simple-grid.lan
[2025-06-04 15:39:26] apptainer works
[2025-06-04 15:39:26] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:39:26] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:39:26] Starting ATLAS job with PandaID=6678214359
[2025-06-04 15:39:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:44:52]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:44:52] 2025-06-04 17:40:12,312 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:44:52] 2025-06-04 17:40:12,312 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:44:52] 2025-06-04 17:40:12,312 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:44:52] 2025-06-04 17:40:12,317 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:44:52] 2025-06-04 17:40:12,318 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,320 | INFO     | sum of deviations: 66754859255.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,320 | INFO     | mean x: 1749051855.5
[2025-06-04 19:44:52] 2025-06-04 17:40:12,320 | INFO     | mean y: 2439763.1875
[2025-06-04 19:44:52] 2025-06-04 17:40:12,320 | INFO     | -- intersect: -33499638331.3548
[2025-06-04 19:44:52] 2025-06-04 17:40:12,320 | INFO     | intersect: -33499638331.3548
[2025-06-04 19:44:52] 2025-06-04 17:40:12,321 | INFO     | chi2: 7.722088447901925
[2025-06-04 19:44:52] 2025-06-04 17:40:12,321 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,323 | INFO     | sum of deviations: 80161745780.00002
[2025-06-04 19:44:52] 2025-06-04 17:40:12,323 | INFO     | mean x: 1749051703.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,323 | INFO     | mean y: 2448543.3105022833
[2025-06-04 19:44:52] 2025-06-04 17:40:12,323 | INFO     | -- intersect: -43047050418.36347
[2025-06-04 19:44:52] 2025-06-04 17:40:12,323 | INFO     | intersect: -43047050418.36347
[2025-06-04 19:44:52] 2025-06-04 17:40:12,324 | INFO     | chi2: 7.025651967535606
[2025-06-04 19:44:52] 2025-06-04 17:40:12,324 | INFO     | current chi2=7.025651967535606 (change=9.018758138616489 %)
[2025-06-04 19:44:52] 2025-06-04 17:40:12,324 | INFO     | right removable region: 218
[2025-06-04 19:44:52] 2025-06-04 17:40:12,324 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,326 | INFO     | sum of deviations: -11196287334.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,327 | INFO     | mean x: 1749052008.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,327 | INFO     | mean y: 2491813.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,327 | INFO     | -- intersect: 6015268098.246568
[2025-06-04 19:44:52] 2025-06-04 17:40:12,327 | INFO     | intersect: 6015268098.246568
[2025-06-04 19:44:52] 2025-06-04 17:40:12,327 | INFO     | chi2: 2.715703216681444
[2025-06-04 19:44:52] 2025-06-04 17:40:12,327 | INFO     | current chi2=2.715703216681444 (change=64.83201099024843 %)
[2025-06-04 19:44:52] 2025-06-04 17:40:12,328 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 19:44:52] 2025-06-04 17:40:12,330 | INFO     | sum of deviations: -54056679117.499985
[2025-06-04 19:44:52] 2025-06-04 17:40:12,330 | INFO     | mean x: 1749052160.5
[2025-06-04 19:44:52] 2025-06-04 17:40:12,330 | INFO     | mean y: 2521628.4065420562
[2025-06-04 19:44:52] 2025-06-04 17:40:12,330 | INFO     | -- intersect: 31115519739.196568
[2025-06-04 19:44:52] 2025-06-04 17:40:12,330 | INFO     | intersect: 31115519739.196568
[2025-06-04 19:44:52] 2025-06-04 17:40:12,331 | INFO     | chi2: 1.0198907099642476
[2025-06-04 19:44:52] 2025-06-04 17:40:12,331 | INFO     | current chi2=1.0198907099642476 (change=62.444691905231764 %)
[2025-06-04 19:44:52] 2025-06-04 17:40:12,331 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,333 | INFO     | sum of deviations: -55844057472.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,333 | INFO     | mean x: 1749052313.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,333 | INFO     | mean y: 2522885.7033492825
[2025-06-04 19:44:52] 2025-06-04 17:40:12,333 | INFO     | -- intersect: 34506759610.20409
[2025-06-04 19:44:52] 2025-06-04 17:40:12,333 | INFO     | intersect: 34506759610.20409
[2025-06-04 19:44:52] 2025-06-04 17:40:12,334 | INFO     | chi2: 0.9808679924122325
[2025-06-04 19:44:52] 2025-06-04 17:40:12,334 | INFO     | current chi2=0.9808679924122325 (change=3.8261665853768756 %)
[2025-06-04 19:44:52] 2025-06-04 17:40:12,334 | INFO     | left removable region: 30
[2025-06-04 19:44:52] 2025-06-04 17:40:12,334 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,336 | INFO     | sum of deviations: -21059887843.0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,336 | INFO     | mean x: 1749052587.5
[2025-06-04 19:44:52] 2025-06-04 17:40:12,336 | INFO     | mean y: 2517817.5531914895
[2025-06-04 19:44:52] 2025-06-04 17:40:12,336 | INFO     | -- intersect: 17880530347.20655
[2025-06-04 19:44:52] 2025-06-04 17:40:12,336 | INFO     | intersect: 17880530347.20655
[2025-06-04 19:44:52] 2025-06-04 17:40:12,337 | INFO     | chi2: 0.1428068163507204
[2025-06-04 19:44:52] 2025-06-04 17:40:12,337 | INFO     | -- intersect: 17880530347.20655
[2025-06-04 19:44:52] 2025-06-04 17:40:12,337 | INFO     | current memory leak: -10.22 B/s (using 188 data points, chi2=0.14)
[2025-06-04 19:44:52] 2025-06-04 17:40:12,338 | INFO     | ..............................
[2025-06-04 19:44:52] 2025-06-04 17:40:12,338 | INFO     | . Timing measurements:
[2025-06-04 19:44:52] 2025-06-04 17:40:12,338 | INFO     | . get job = 0 s
[2025-06-04 19:44:52] 2025-06-04 17:40:12,338 | INFO     | . initial setup = 6 s
[2025-06-04 19:44:52] 2025-06-04 17:40:12,338 | INFO     | . payload setup = 170 s
[2025-06-04 19:44:52] 2025-06-04 17:40:12,338 | INFO     | . stage-in = 0 s
[2025-06-04 19:44:52] 2025-06-04 17:40:12,338 | INFO     | . payload execution = 13809 s
[2025-06-04 19:44:52] 2025-06-04 17:40:12,338 | INFO     | . stage-out = 3 s
[2025-06-04 19:44:52] 2025-06-04 17:40:12,339 | INFO     | . log creation = 1 s
[2025-06-04 19:44:52] 2025-06-04 17:40:12,339 | INFO     | ..............................
[2025-06-04 19:44:52] 2025-06-04 17:40:12,474 | INFO     | 
[2025-06-04 19:44:52] 2025-06-04 17:40:12,474 | INFO     | job summary report
[2025-06-04 19:44:52] 2025-06-04 17:40:12,474 | INFO     | --------------------------------------------------
[2025-06-04 19:44:52] 2025-06-04 17:40:12,474 | INFO     | PanDA job id: 6678214359
[2025-06-04 19:44:52] 2025-06-04 17:40:12,474 | INFO     | task id: 45006595
[2025-06-04 19:44:52] 2025-06-04 17:40:12,474 | INFO     | errors: (none)
[2025-06-04 19:44:52] 2025-06-04 17:40:12,474 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:44:52] 2025-06-04 17:40:12,474 | INFO     | pilot state: finished 
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | transexitcode: 0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | exeerrorcode: 0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | exeerrordiag: 
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | exitcode: 0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | exitmsg: OK
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | cpuconsumptiontime: 51093 s
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | nevents: 400
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | neventsw: 0
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | pid: 24870
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | pgrp: 24870
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | corecount: 8
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | event service: False
[2025-06-04 19:44:52] 2025-06-04 17:40:12,475 | INFO     | sizes: {0: 2397120, 1: 2397319, 12: 2397319, 23: 2397347, 33: 2397375, 44: 2397431, 55: 2397587, 65: 2397615, 76: 2397643, 86: 2397905, 87: 2397933, 13984: 2427928
[2025-06-04 19:44:52] 2025-06-04 17:40:12,476 | INFO     | --------------------------------------------------
[2025-06-04 19:44:52] 2025-06-04 17:40:12,476 | INFO     | 
[2025-06-04 19:44:52] 2025-06-04 17:40:12,476 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 19:44:52] 2025-06-04 17:40:12,594 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,594 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,594 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,594 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,594 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,594 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,595 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,595 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,595 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,595 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,595 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,595 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,596 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,596 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:44:52] 2025-06-04 17:40:12,596 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,596 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:44:52] 2025-06-04 17:40:12,596 | INFO     | job 6678214359 has completed (purged errors)
[2025-06-04 19:44:52] 2025-06-04 17:40:12,596 | INFO     | overall cleanup function is called
[2025-06-04 19:44:52] 2025-06-04 17:40:13,605 | INFO     | --- collectZombieJob: --- 10, [24870]
[2025-06-04 19:44:52] 2025-06-04 17:40:13,606 | INFO     | zombie collector waiting for pid 24870
[2025-06-04 19:44:52] 2025-06-04 17:40:13,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:44:52] 2025-06-04 17:40:13,606 | INFO     | collected zombie processes
[2025-06-04 19:44:52] 2025-06-04 17:40:13,606 | INFO     | will attempt to kill all subprocesses of pid=24870
[2025-06-04 19:44:52] 2025-06-04 17:40:13,718 | INFO     | process IDs to be killed: [24870] (in reverse order)
[2025-06-04 19:44:52] 2025-06-04 17:40:14,297 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:44:52] 2025-06-04 17:40:14,298 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:44:52] 2025-06-04 17:40:14,301 | INFO     | did not find any defunct processes belonging to 24870
[2025-06-04 19:44:52] 2025-06-04 17:40:14,304 | INFO     | did not find any defunct processes belonging to 24870
[2025-06-04 19:44:52] 2025-06-04 17:40:14,304 | INFO     | ready for new job
[2025-06-04 19:44:52] 2025-06-04 17:40:14,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:44:52] 2025-06-04 17:40:14,306 | INFO     | **************************************
[2025-06-04 19:44:52] 2025-06-04 17:40:14,306 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:44:52] 2025-06-04 17:40:14,306 | INFO     | **************************************
[2025-06-04 19:44:52] 2025-06-04 17:40:14,306 | INFO     | 
[2025-06-04 19:44:52] 2025-06-04 17:40:14,307 | INFO     | pilot is running in a VM
[2025-06-04 19:44:52] 2025-06-04 17:40:14,307 | INFO     | architecture information:
[2025-06-04 19:44:52] 2025-06-04 17:40:14,309 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:44:52] 2025-06-04 17:40:14,360 | INFO     | cat /etc/os-release:
[2025-06-04 19:44:52] NAME="CentOS Linux"
[2025-06-04 19:44:52] VERSION="7 (Core)"
[2025-06-04 19:44:52] ID="centos"
[2025-06-04 19:44:52] ID_LIKE="rhel fedora"
[2025-06-04 19:44:52] VERSION_ID="7"
[2025-06-04 19:44:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:44:52] ANSI_COLOR="0;31"
[2025-06-04 19:44:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:44:52] HOME_URL="https://www.centos.org/"
[2025-06-04 19:44:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:44:52] 
[2025-06-04 19:44:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:44:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:44:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:44:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:44:52] 
[2025-06-04 19:44:52] 2025-06-04 17:40:14,360 | INFO     | **************************************
[2025-06-04 19:44:52] 2025-06-04 17:40:14,863 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 19:44:52] 2025-06-04 17:40:15,047 | INFO     | sufficient remaining disk space (496421044224 B)
[2025-06-04 19:44:52] 2025-06-04 17:40:15,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:44:52] 2025-06-04 17:40:15,048 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:44:52] 2025-06-04 17:40:15,048 | INFO     | update_server=False
[2025-06-04 19:44:52] 2025-06-04 17:40:15,048 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:44:52] 2025-06-04 17:40:15,048 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:44:52] 2025-06-04 17:40:15,049 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:44:52] 2025-06-04 17:40:15,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:44:52] 2025-06-04 17:40:15,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:44:52] 2025-06-04 17:40:15,091 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 19:44:52] 2025-06-04 17:40:15,092 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 19:44:52] 2025-06-04 17:40:15,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:44:52] 2025-06-04 17:40:15,092 | INFO     | will abort loop
[2025-06-04 19:44:52] 2025-06-04 17:40:15,637 | INFO     | all data control threads have been joined
[2025-06-04 19:44:52] 2025-06-04 17:40:15,863 | INFO     | all job control threads have been joined
[2025-06-04 19:44:52] 2025-06-04 17:40:16,054 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:16,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:44:52] 2025-06-04 17:40:16,098 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:16,427 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:16,516 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:16,545 | INFO     | all payload control threads have been joined
[2025-06-04 19:44:52] 2025-06-04 17:40:16,643 | INFO     | [data] control thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:16,790 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:16,845 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:16,869 | INFO     | [job] control thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:17,234 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:17,239 | INFO     | [job] validate thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:17,322 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:17,485 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:44:52] 2025-06-04 17:40:17,505 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:17,550 | INFO     | [payload] control thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:17,620 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:44:52] 2025-06-04 17:40:18,070 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:18,491 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:21,629 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:44:52] 2025-06-04 17:40:22,734 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139948794849088)>', '<ExcThread(monitor, started 139948567959296)>']
[2025-06-04 19:44:52] 2025-06-04 17:40:23,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:44:52] 2025-06-04 17:40:23,098 | INFO     | [monitor] control thread has ended
[2025-06-04 19:44:52] 2025-06-04 17:40:27,759 | INFO     | all workflow threads have been joined
[2025-06-04 19:44:52] 2025-06-04 17:40:27,760 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:44:52] 2025-06-04 17:40:27,760 | INFO     | traces error code: 0
[2025-06-04 19:44:52] 2025-06-04 17:40:27,760 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:44:52] 2025-06-04 17:40:28,039 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:44:52] 2025-06-04 17:40:28,094 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:44:52] 2025-06-04 17:40:28,194 [wrapper] pilotpid: 16303
[2025-06-04 19:44:52] 2025-06-04 17:40:28,292 [wrapper] Pilot exit status: 0
[2025-06-04 19:44:52] 2025-06-04 17:40:28,636 [wrapper] pandaids: 6678214359
[2025-06-04 19:44:52] 2025-06-04 17:40:29,227 [wrapper] cleanup supervisor_pilot  1652 16304
[2025-06-04 19:44:52] 2025-06-04 17:40:29,291 [wrapper] Test setup, not cleaning
[2025-06-04 19:44:52] 2025-06-04 17:40:29,379 [wrapper] apfmon messages muted
[2025-06-04 19:44:52] 2025-06-04 17:40:29,468 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:44:52] 2025-06-04 17:40:29,519 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:44:52]  *** Error codes and diagnostics ***
[2025-06-04 19:44:52]     "exeErrorCode": 0,
[2025-06-04 19:44:52]     "exeErrorDiag": "",
[2025-06-04 19:44:52]     "pilotErrorCode": 0,
[2025-06-04 19:44:52]     "pilotErrorDiag": "",
[2025-06-04 19:44:52]  *** Listing of results directory ***
[2025-06-04 19:44:52] total 398424
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-04 19:44:52] -rwx------. 1 boinc boinc     37140 Jun  4 02:32 runpilot2-wrapper.sh
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc      5111 Jun  4 02:32 queuedata.json
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc       100 Jun  4 15:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:44:52] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 15:39 run_atlas
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc       105 Jun  4 15:39 job.xml
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc      6392 Jun  4 15:39 init_data.xml
[2025-06-04 19:44:52] -rw-r--r--. 2 boinc boinc 219423763 Jun  4 15:39 EVNT.45006593._001960.pool.root.1
[2025-06-04 19:44:52] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:39 start_atlas.sh
[2025-06-04 19:44:52] drwxrwx--x. 2 boinc boinc        68 Jun  4 15:39 shared
[2025-06-04 19:44:52] -rw-r--r--. 2 boinc boinc    508878 Jun  4 15:39 input.tar.gz
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc         0 Jun  4 15:39 boinc_lockfile
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc      2524 Jun  4 15:39 pandaJob.out
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc    986819 Jun  4 15:42 agis_schedconf.cvmfs.json
[2025-06-04 19:44:52] drwx------. 4 boinc boinc      4096 Jun  4 15:42 pilot3
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc 181527536 Jun  4 19:37 HITS.45006595._048874.pool.root.1
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc       531 Jun  4 19:37 boinc_task_state.xml
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc      1017 Jun  4 19:38 memory_monitor_summary.json
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc   1598969 Jun  4 19:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc    393528 Jun  4 19:38 log.45006595._048874.job.log.tgz.1
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc      7694 Jun  4 19:40 heartbeat.json
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc        95 Jun  4 19:40 pilot_heartbeat.json
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc      4725 Jun  4 19:40 pilotlog.txt
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc   1210956 Jun  4 19:40 log.45006595._048874.job.log.1
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc       357 Jun  4 19:40 output.list
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc       620 Jun  4 19:40 runtime_log
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc   1628160 Jun  4 19:40 result.tar.gz
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc      8659 Jun  4 19:40 runtime_log.err
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc       657 Jun  4 19:40 otnKDmbErg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm8LaKDmFSGrPo.diag
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc      8192 Jun  4 19:44 boinc_mmap_file
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc        28 Jun  4 19:44 wrapper_checkpoint.txt
[2025-06-04 19:44:52] -rw-r--r--. 1 boinc boinc     20507 Jun  4 19:44 stderr.txt
[2025-06-04 19:44:52] HITS file was successfully produced:
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc 181527536 Jun  4 19:37 shared/HITS.pool.root.1
[2025-06-04 19:44:52]  *** Contents of shared directory: ***
[2025-06-04 19:44:52] total 393668
[2025-06-04 19:44:52] -rw-r--r--. 2 boinc boinc 219423763 Jun  4 15:39 ATLAS.root_0
[2025-06-04 19:44:52] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:39 start_atlas.sh
[2025-06-04 19:44:52] -rw-r--r--. 2 boinc boinc    508878 Jun  4 15:39 input.tar.gz
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc 181527536 Jun  4 19:37 HITS.pool.root.1
[2025-06-04 19:44:52] -rw-------. 1 boinc boinc   1628160 Jun  4 19:40 result.tar.gz
19:44:54 (11208): run_atlas exited; CPU time 51293.340566
19:44:54 (11208): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN