Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
17:15:06 (2991084): wrapper (7.7.26015): starting
17:15:06 (2991084): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 17:15:06] Arguments: --nthreads 3
[2025-06-04 17:15:06] Threads: 3
[2025-06-04 17:15:06] Checking for CVMFS
[2025-06-04 17:15:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:15:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:15:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:15:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:15:06] 2.9.2.0 2199589 2611 67936 146783 0 56 30213261 36864001 0 130560 0 2139014 99.992 605297 43474 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 17:15:06] CVMFS is ok
[2025-06-04 17:15:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 17:15:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 17:15:06] Further information can be found at the LHC@home message board.
[2025-06-04 17:15:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:15:06] Checking for apptainer binary...
[2025-06-04 17:15:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:15:06] Running /usr/bin/apptainer --version
[2025-06-04 17:15:06] apptainer version 1.3.6-6.1
[2025-06-04 17:15:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:15:06] cosA133a
[2025-06-04 17:15:06] apptainer works
[2025-06-04 17:15:06] Set ATHENA_PROC_NUMBER=3
[2025-06-04 17:15:06] Set ATHENA_CORE_NUMBER=3
[2025-06-04 17:15:06] Starting ATLAS job with PandaID=6678074403
[2025-06-04 17:15:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:37:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:37:46]  lfn=log.45006595._045916.job.log.tgz.1
[2025-06-04 18:37:46]  mtime=0
[2025-06-04 18:37:46]  protocol_id=None
[2025-06-04 18:37:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 18:37:46]  replicas=None
[2025-06-04 18:37:46]  scope=mc23_13p6TeV
[2025-06-04 18:37:46]  status=None
[2025-06-04 18:37:46]  status_code=0
[2025-06-04 18:37:46]  storage_token=
[2025-06-04 18:37:46]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678074403/log.45006595._045916.job.log.tgz.1
[2025-06-04 18:37:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/6f/log.45006595._045916.job.log.tgz.1
[2025-06-04 18:37:46]  workdir=None
[2025-06-04 18:37:46] ]
[2025-06-04 18:37:46] 2025-06-04 16:37:17,034 | INFO     | transferring file log.45006595._045916.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678074403/log.45006595._045916.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 18:37:46] 2025-06-04 16:37:17,034 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678074403/log.45006595._045916.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0459
[2025-06-04 18:37:46] 2025-06-04 16:37:17,046 | INFO     | adding to output.list: log.45006595._045916.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/6f/log.45006595._045916.job.log.tg
[2025-06-04 18:37:46] 2025-06-04 16:37:17,047 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 18:37:46] 2025-06-04 16:37:17,047 | INFO     | summary of transferred files:
[2025-06-04 18:37:46] 2025-06-04 16:37:17,047 | INFO     |  -- lfn=log.45006595._045916.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 18:37:46] 2025-06-04 16:37:17,047 | INFO     | stage-out finished correctly
[2025-06-04 18:37:46] 2025-06-04 16:37:17,078 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 18:37:46] 2025-06-04 16:37:17,187 | INFO     | monitor loop #380: job 0:6678074403 is in state 'finished'
[2025-06-04 18:37:46] 2025-06-04 16:37:17,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:37:46] 2025-06-04 16:37:18,835 | INFO     | job 6678074403 has state=finished
[2025-06-04 18:37:46] 2025-06-04 16:37:18,836 | INFO     | preparing for final server update for job 6678074403 in state='finished'
[2025-06-04 18:37:46] 2025-06-04 16:37:18,837 | INFO     | this job has now completed (state=finished)
[2025-06-04 18:37:46] 2025-06-04 16:37:18,837 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 18:37:46] 2025-06-04 16:37:18,837 | INFO     | log transfer has been attempted: DONE
[2025-06-04 18:37:46] 2025-06-04 16:37:18,837 | INFO     | job 6678074403 has finished - writing final server update
[2025-06-04 18:37:46] 2025-06-04 16:37:18,838 | INFO     | total number of processed events: 400 (read)
[2025-06-04 18:37:46] 2025-06-04 16:37:18,841 | INFO     | executing command: lscpu
[2025-06-04 18:37:46] 2025-06-04 16:37:18,858 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 18:37:46] 2025-06-04 16:37:19,690 | INFO     | monitor loop #381: job 0:6678074403 is in state 'finished'
[2025-06-04 18:37:46] 2025-06-04 16:37:19,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:37:46] 2025-06-04 16:37:22,193 | INFO     | monitor loop #382: job 0:6678074403 is in state 'finished'
[2025-06-04 18:37:46] 2025-06-04 16:37:22,196 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:37:46] 2025-06-04 16:37:24,699 | INFO     | monitor loop #383: job 0:6678074403 is in state 'finished'
[2025-06-04 18:37:46] 2025-06-04 16:37:24,699 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 18:37:46] 2025-06-04 16:37:26,714 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 18:37:46] 2025-06-04 16:37:26,715 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678074403/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 18:37:46] 2025-06-04 16:37:26,715 | INFO     | extracted standard info from prmon json
[2025-06-04 18:37:46] 2025-06-04 16:37:26,715 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:37:46] 2025-06-04 16:37:26,715 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:37:46] 2025-06-04 16:37:26,715 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:37:46] 2025-06-04 16:37:26,715 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:37:46] 2025-06-04 16:37:26,716 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:37:46] 2025-06-04 16:37:26,716 | INFO     | sum of square deviations: 125630262.5
[2025-06-04 18:37:46] 2025-06-04 16:37:26,716 | INFO     | sum of deviations: 460191350.4999999
[2025-06-04 18:37:46] 2025-06-04 16:37:26,716 | INFO     | mean x: 1749052676.5
[2025-06-04 18:37:46] 2025-06-04 16:37:26,716 | INFO     | mean y: 2349386.7702702703
[2025-06-04 18:37:46] 2025-06-04 16:37:26,716 | INFO     | -- intersect: -6404537753.930995
[2025-06-04 18:37:46] 2025-06-04 16:37:26,716 | INFO     | intersect: -6404537753.930995
[2025-06-04 18:37:46] 2025-06-04 16:37:26,716 | INFO     | chi2: 0.002513608854014162
[2025-06-04 18:37:46] 2025-06-04 16:37:26,717 | INFO     | -- intersect: -6404537753.930995
[2025-06-04 18:37:46] 2025-06-04 16:37:26,717 | INFO     | current memory leak: 3.66 B/s (using 74 data points, chi2=0.00)
[2025-06-04 18:37:46] 2025-06-04 16:37:26,717 | INFO     | ..............................
[2025-06-04 18:37:46] 2025-06-04 16:37:26,717 | INFO     | . Timing measurements:
[2025-06-04 18:37:46] 2025-06-04 16:37:26,717 | INFO     | . get job = 0 s
[2025-06-04 18:37:46] 2025-06-04 16:37:26,717 | INFO     | . initial setup = 1 s
[2025-06-04 18:37:46] 2025-06-04 16:37:26,717 | INFO     | . payload setup = 6 s
[2025-06-04 18:37:46] 2025-06-04 16:37:26,717 | INFO     | . stage-in = 0 s
[2025-06-04 18:37:46] 2025-06-04 16:37:26,717 | INFO     | . payload execution = 4891 s
[2025-06-04 18:37:46] 2025-06-04 16:37:26,717 | INFO     | . stage-out = 0 s
[2025-06-04 18:37:46] 2025-06-04 16:37:26,717 | INFO     | . log creation = 0 s
[2025-06-04 18:37:46] 2025-06-04 16:37:26,717 | INFO     | ..............................
[2025-06-04 18:37:46] 2025-06-04 16:37:26,748 | INFO     | 
[2025-06-04 18:37:46] 2025-06-04 16:37:26,748 | INFO     | job summary report
[2025-06-04 18:37:46] 2025-06-04 16:37:26,748 | INFO     | --------------------------------------------------
[2025-06-04 18:37:46] 2025-06-04 16:37:26,748 | INFO     | PanDA job id: 6678074403
[2025-06-04 18:37:46] 2025-06-04 16:37:26,748 | INFO     | task id: 45006595
[2025-06-04 18:37:46] 2025-06-04 16:37:26,748 | INFO     | errors: (none)
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | pilot state: finished 
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | transexitcode: 0
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | exeerrorcode: 0
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | exeerrordiag: 
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | exitcode: 0
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | exitmsg: OK
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | cpuconsumptiontime: 14021 s
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | nevents: 400
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | neventsw: 0
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | pid: 3001229
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | pgrp: 3001229
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | corecount: 3
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | event service: False
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | sizes: {0: 2397344, 5: 2397550, 11: 2397606, 4901: 2423833, 4902: 2432836, 4912: 2432950}
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | --------------------------------------------------
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | 
[2025-06-04 18:37:46] 2025-06-04 16:37:26,749 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,762 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:37:46] 2025-06-04 16:37:26,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:37:46] 2025-06-04 16:37:26,762 | INFO     | job 6678074403 has completed (purged errors)
[2025-06-04 18:37:46] 2025-06-04 16:37:26,762 | INFO     | overall cleanup function is called
[2025-06-04 18:37:46] 2025-06-04 16:37:27,575 | INFO     | PID=2994725 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 18:37:46] 2025-06-04 16:37:27,768 | INFO     | --- collectZombieJob: --- 10, [3001229]
[2025-06-04 18:37:46] 2025-06-04 16:37:27,768 | INFO     | zombie collector waiting for pid 3001229
[2025-06-04 18:37:46] 2025-06-04 16:37:27,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:37:46] 2025-06-04 16:37:27,769 | INFO     | collected zombie processes
[2025-06-04 18:37:46] 2025-06-04 16:37:27,769 | INFO     | will attempt to kill all subprocesses of pid=3001229
[2025-06-04 18:37:46] 2025-06-04 16:37:27,806 | INFO     | process IDs to be killed: [3001229] (in reverse order)
[2025-06-04 18:37:46] 2025-06-04 16:37:27,832 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:37:46] 2025-06-04 16:37:27,832 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:37:46] 2025-06-04 16:37:27,833 | INFO     | did not find any defunct processes belonging to 3001229
[2025-06-04 18:37:46] 2025-06-04 16:37:27,834 | INFO     | did not find any defunct processes belonging to 3001229
[2025-06-04 18:37:46] 2025-06-04 16:37:27,834 | INFO     | ready for new job
[2025-06-04 18:37:46] 2025-06-04 16:37:27,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:37:46] 2025-06-04 16:37:27,834 | INFO     | **************************************
[2025-06-04 18:37:46] 2025-06-04 16:37:27,835 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:37:46] 2025-06-04 16:37:27,835 | INFO     | **************************************
[2025-06-04 18:37:46] 2025-06-04 16:37:27,835 | INFO     | 
[2025-06-04 18:37:46] 2025-06-04 16:37:27,835 | INFO     | architecture information:
[2025-06-04 18:37:46] 2025-06-04 16:37:27,835 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:37:46] 2025-06-04 16:37:27,844 | INFO     | cat /etc/os-release:
[2025-06-04 18:37:46] NAME="CentOS Linux"
[2025-06-04 18:37:46] VERSION="7 (Core)"
[2025-06-04 18:37:46] ID="centos"
[2025-06-04 18:37:46] ID_LIKE="rhel fedora"
[2025-06-04 18:37:46] VERSION_ID="7"
[2025-06-04 18:37:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:37:46] ANSI_COLOR="0;31"
[2025-06-04 18:37:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:37:46] HOME_URL="https://www.centos.org/"
[2025-06-04 18:37:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:37:46] 
[2025-06-04 18:37:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:37:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:37:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:37:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:37:46] 
[2025-06-04 18:37:46] 2025-06-04 16:37:27,844 | INFO     | **************************************
[2025-06-04 18:37:46] 2025-06-04 16:37:28,348 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 18:37:46] 2025-06-04 16:37:28,361 | INFO     | sufficient remaining disk space (325532516352 B)
[2025-06-04 18:37:46] 2025-06-04 16:37:28,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:37:46] 2025-06-04 16:37:28,361 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:37:46] 2025-06-04 16:37:28,361 | INFO     | update_server=False
[2025-06-04 18:37:46] 2025-06-04 16:37:28,361 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:37:46] 2025-06-04 16:37:28,361 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 18:37:46] 2025-06-04 16:37:28,361 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:37:46] 2025-06-04 16:37:28,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:37:46] 2025-06-04 16:37:28,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:37:46] 2025-06-04 16:37:28,361 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:37:46] 2025-06-04 16:37:28,362 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:37:46] 2025-06-04 16:37:28,362 | INFO     | aborting loop
[2025-06-04 18:37:46] 2025-06-04 16:37:28,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:37:46] 2025-06-04 16:37:28,362 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:37:46] 2025-06-04 16:37:28,411 | INFO     | all job control threads have been joined
[2025-06-04 18:37:46] 2025-06-04 16:37:28,575 | INFO     | all data control threads have been joined
[2025-06-04 18:37:46] 2025-06-04 16:37:28,667 | INFO     | all payload control threads have been joined
[2025-06-04 18:37:46] 2025-06-04 16:37:29,367 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:29,368 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:29,368 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:29,417 | INFO     | [job] control thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:29,543 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:29,581 | INFO     | [data] control thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:29,673 | INFO     | [payload] control thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:29,833 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:30,368 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:30,372 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:30,377 | INFO     | [job] validate thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:30,607 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:30,763 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:30,786 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:32,369 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:38,809 | INFO     | job.realtimelogging is not enabled
[2025-06-04 18:37:46] 2025-06-04 16:37:39,815 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:37:46] 2025-06-04 16:37:41,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139816699717440)>', '<ExcThread(monitor, started 139816058472192)>']
[2025-06-04 18:37:46] 2025-06-04 16:37:41,428 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:37:46] 2025-06-04 16:37:41,428 | INFO     | [monitor] control thread has ended
[2025-06-04 18:37:46] 2025-06-04 16:37:46,190 | INFO     | all workflow threads have been joined
[2025-06-04 18:37:46] 2025-06-04 16:37:46,190 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:37:46] 2025-06-04 16:37:46,191 | INFO     | traces error code: 0
[2025-06-04 18:37:46] 2025-06-04 16:37:46,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:37:46] 2025-06-04 16:37:46,238 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:37:46] 2025-06-04 16:37:46,242 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:37:46] 2025-06-04 16:37:46,244 [wrapper] pilotpid: 2994725
[2025-06-04 18:37:46] 2025-06-04 16:37:46,247 [wrapper] Pilot exit status: 0
[2025-06-04 18:37:46] 2025-06-04 16:37:46,255 [wrapper] pandaids: 6678074403
[2025-06-04 18:37:46] 2025-06-04 16:37:46,271 [wrapper] cleanup supervisor_pilot 3013251 2994726
[2025-06-04 18:37:46] 2025-06-04 16:37:46,274 [wrapper] Test setup, not cleaning
[2025-06-04 18:37:46] 2025-06-04 16:37:46,276 [wrapper] apfmon messages muted
[2025-06-04 18:37:46] 2025-06-04 16:37:46,279 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:37:46] 2025-06-04 16:37:46,282 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:37:46]  *** Error codes and diagnostics ***
[2025-06-04 18:37:46]     "exeErrorCode": 0,
[2025-06-04 18:37:46]     "exeErrorDiag": "",
[2025-06-04 18:37:46]     "pilotErrorCode": 0,
[2025-06-04 18:37:46]     "pilotErrorDiag": "",
[2025-06-04 18:37:46]  *** Listing of results directory ***
[2025-06-04 18:37:46] total 392512
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:15 pilot3.tar.gz
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:22 queuedata.json
[2025-06-04 18:37:46] -rwx------ 1 boinc boinc     37140 Jun  3 23:23 runpilot2-wrapper.sh
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc       100 Jun  4 17:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:37:46] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 17:15 run_atlas
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc       105 Jun  4 17:15 job.xml
[2025-06-04 18:37:46] -rw-r--r-- 2 boinc boinc 216300332 Jun  4 17:15 EVNT.45006593._001842.pool.root.1
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc      6682 Jun  4 17:15 init_data.xml
[2025-06-04 18:37:46] drwxrwx--x 2 boinc boinc      4096 Jun  4 17:15 shared
[2025-06-04 18:37:46] -rw-r--r-- 2 boinc boinc    508884 Jun  4 17:15 input.tar.gz
[2025-06-04 18:37:46] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:15 start_atlas.sh
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc         0 Jun  4 17:15 boinc_lockfile
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc      2524 Jun  4 17:15 pandaJob.out
[2025-06-04 18:37:46] -rw------- 1 boinc boinc    987207 Jun  4 17:15 agis_schedconf.cvmfs.json
[2025-06-04 18:37:46] -rw------- 1 boinc boinc   1598969 Jun  4 17:15 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:37:46] drwx------ 4 boinc boinc      4096 Jun  4 17:15 pilot3
[2025-06-04 18:37:46] -rw------- 1 boinc boinc        95 Jun  4 18:36 pilot_heartbeat.json
[2025-06-04 18:37:46] -rw------- 1 boinc boinc 180396721 Jun  4 18:36 HITS.45006595._045916.pool.root.1
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc       529 Jun  4 18:36 boinc_task_state.xml
[2025-06-04 18:37:46] -rw------- 1 boinc boinc      1018 Jun  4 18:37 memory_monitor_summary.json
[2025-06-04 18:37:46] -rw------- 1 boinc boinc    218039 Jun  4 18:37 log.45006595._045916.job.log.tgz.1
[2025-06-04 18:37:46] -rw------- 1 boinc boinc      7656 Jun  4 18:37 heartbeat.json
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc        27 Jun  4 18:37 wrapper_checkpoint.txt
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc      8192 Jun  4 18:37 boinc_mmap_file
[2025-06-04 18:37:46] -rw------- 1 boinc boinc      4552 Jun  4 18:37 pilotlog.txt
[2025-06-04 18:37:46] -rw------- 1 boinc boinc    479439 Jun  4 18:37 log.45006595._045916.job.log.1
[2025-06-04 18:37:46] -rw------- 1 boinc boinc       357 Jun  4 18:37 output.list
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc       620 Jun  4 18:37 runtime_log
[2025-06-04 18:37:46] -rw------- 1 boinc boinc    716800 Jun  4 18:37 result.tar.gz
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc      8743 Jun  4 18:37 runtime_log.err
[2025-06-04 18:37:46] -rw------- 1 boinc boinc       660 Jun  4 18:37 QDTMDmIHog7n9Rq4apOajLDm4fhM0noT9bVof3QYDmXyZKDmvtIBfm.diag
[2025-06-04 18:37:46] -rw-r--r-- 1 boinc boinc     21662 Jun  4 18:37 stderr.txt
[2025-06-04 18:37:46] HITS file was successfully produced:
[2025-06-04 18:37:46] -rw------- 1 boinc boinc 180396721 Jun  4 18:36 shared/HITS.pool.root.1
[2025-06-04 18:37:46]  *** Contents of shared directory: ***
[2025-06-04 18:37:46] total 388628
[2025-06-04 18:37:46] -rw-r--r-- 2 boinc boinc 216300332 Jun  4 17:15 ATLAS.root_0
[2025-06-04 18:37:46] -rw-r--r-- 2 boinc boinc    508884 Jun  4 17:15 input.tar.gz
[2025-06-04 18:37:46] -rw-r--r-- 2 boinc boinc     15093 Jun  4 17:15 start_atlas.sh
[2025-06-04 18:37:46] -rw------- 1 boinc boinc 180396721 Jun  4 18:36 HITS.pool.root.1
[2025-06-04 18:37:46] -rw------- 1 boinc boinc    716800 Jun  4 18:37 result.tar.gz
18:37:48 (2991084): run_atlas exited; CPU time 14045.254397
18:37:48 (2991084): called boinc_finish(0)

</stderr_txt>
]]>

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