Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:08:46 (4337): wrapper (7.7.26015): starting
16:08:46 (4337): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 16:08:46] Arguments: --nthreads 8
[2025-06-04 16:08:46] Threads: 8
[2025-06-04 16:08:46] Checking for CVMFS
[2025-06-04 16:08:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:08:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:08:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:08:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:08:48] 2.11.2.0 785 33302 93360 146781 3 59 17457821 25165825 3910 130560 0 17084511 99.793 19815808 2188 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 16:08:48] CVMFS is ok
[2025-06-04 16:08:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:08:48] Checking for apptainer binary...
[2025-06-04 16:08:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:08:48] Running /usr/bin/apptainer --version
[2025-06-04 16:08:48] apptainer version 1.3.2-1.el7
[2025-06-04 16:08:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:09:02] cg-vwn255.simple-grid.lan
[2025-06-04 16:09:02] apptainer works
[2025-06-04 16:09:02] Set ATHENA_PROC_NUMBER=8
[2025-06-04 16:09:02] Set ATHENA_CORE_NUMBER=8
[2025-06-04 16:09:02] Starting ATLAS job with PandaID=6678213967
[2025-06-04 16:09:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 20:44:33]  *** The last 200 lines of the pilot log: ***
[2025-06-04 20:44:33] 2025-06-04 18:30:51,567 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 20:44:33] 2025-06-04 18:30:51,567 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 20:44:33] 2025-06-04 18:30:51,568 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 20:44:33] 2025-06-04 18:30:51,573 | INFO     | fitting pss+swap vs Time
[2025-06-04 20:44:33] 2025-06-04 18:30:51,579 | INFO     | sum of square deviations: 4560048290.0
[2025-06-04 20:44:33] 2025-06-04 18:30:51,581 | INFO     | sum of deviations: 135404812830.0
[2025-06-04 20:44:33] 2025-06-04 18:30:51,581 | INFO     | mean x: 1749054292.0
[2025-06-04 20:44:33] 2025-06-04 18:30:51,582 | INFO     | mean y: 2402567.404081633
[2025-06-04 20:44:33] 2025-06-04 18:30:51,582 | INFO     | -- intersect: -51933531873.71302
[2025-06-04 20:44:33] 2025-06-04 18:30:51,582 | INFO     | intersect: -51933531873.71302
[2025-06-04 20:44:33] 2025-06-04 18:30:51,582 | INFO     | chi2: 7.678784530752962
[2025-06-04 20:44:33] 2025-06-04 18:30:51,583 | INFO     | sum of square deviations: 4286517580.0
[2025-06-04 20:44:33] 2025-06-04 18:30:51,585 | INFO     | sum of deviations: 148444204916.0
[2025-06-04 20:44:33] 2025-06-04 18:30:51,585 | INFO     | mean x: 1749054139.5
[2025-06-04 20:44:33] 2025-06-04 18:30:51,585 | INFO     | mean y: 2409687.566666667
[2025-06-04 20:44:33] 2025-06-04 18:30:51,586 | INFO     | -- intersect: -60568192496.48318
[2025-06-04 20:44:33] 2025-06-04 18:30:51,586 | INFO     | intersect: -60568192496.48318
[2025-06-04 20:44:33] 2025-06-04 18:30:51,586 | INFO     | chi2: 6.962751234452373
[2025-06-04 20:44:33] 2025-06-04 18:30:51,586 | INFO     | current chi2=6.962751234452373 (change=9.324825998606013 %)
[2025-06-04 20:44:33] 2025-06-04 18:30:51,586 | INFO     | right removable region: 239
[2025-06-04 20:44:33] 2025-06-04 18:30:51,587 | INFO     | sum of square deviations: 4286517580.0
[2025-06-04 20:44:33] 2025-06-04 18:30:51,589 | INFO     | sum of deviations: 51022662642.499985
[2025-06-04 20:44:33] 2025-06-04 18:30:51,597 | INFO     | mean x: 1749054444.5
[2025-06-04 20:44:33] 2025-06-04 18:30:51,597 | INFO     | mean y: 2449582.8375
[2025-06-04 20:44:33] 2025-06-04 18:30:51,597 | INFO     | -- intersect: -20816644985.086494
[2025-06-04 20:44:33] 2025-06-04 18:30:51,597 | INFO     | intersect: -20816644985.086494
[2025-06-04 20:44:33] 2025-06-04 18:30:51,598 | INFO     | chi2: 2.752409992150022
[2025-06-04 20:44:33] 2025-06-04 18:30:51,598 | INFO     | current chi2=2.752409992150022 (change=64.15565534979105 %)
[2025-06-04 20:44:33] 2025-06-04 18:30:51,598 | INFO     | sum of square deviations: 4024149870.0
[2025-06-04 20:44:33] 2025-06-04 18:30:51,600 | INFO     | sum of deviations: -685630362.0000019
[2025-06-04 20:44:33] 2025-06-04 18:30:51,601 | INFO     | mean x: 1749054597.0
[2025-06-04 20:44:33] 2025-06-04 18:30:51,601 | INFO     | mean y: 2479512.770212766
[2025-06-04 20:44:33] 2025-06-04 18:30:51,601 | INFO     | -- intersect: 300481569.16451836
[2025-06-04 20:44:33] 2025-06-04 18:30:51,601 | INFO     | intersect: 300481569.16451836
[2025-06-04 20:44:33] 2025-06-04 18:30:51,602 | INFO     | chi2: 0.8329399846677065
[2025-06-04 20:44:33] 2025-06-04 18:30:51,602 | INFO     | current chi2=0.8329399846677065 (change=69.73779389541227 %)
[2025-06-04 20:44:33] 2025-06-04 18:30:51,602 | INFO     | sum of square deviations: 3772712597.5
[2025-06-04 20:44:33] 2025-06-04 18:30:51,604 | INFO     | sum of deviations: -3582300518.000002
[2025-06-04 20:44:33] 2025-06-04 18:30:51,605 | INFO     | mean x: 1749054749.5
[2025-06-04 20:44:33] 2025-06-04 18:30:51,605 | INFO     | mean y: 2481227.9043478263
[2025-06-04 20:44:33] 2025-06-04 18:30:51,605 | INFO     | -- intersect: 1663259666.0223641
[2025-06-04 20:44:33] 2025-06-04 18:30:51,605 | INFO     | intersect: 1663259666.0223641
[2025-06-04 20:44:33] 2025-06-04 18:30:51,606 | INFO     | chi2: 0.8061780467126227
[2025-06-04 20:44:33] 2025-06-04 18:30:51,606 | INFO     | current chi2=0.8061780467126227 (change=3.2129491257116407 %)
[2025-06-04 20:44:33] 2025-06-04 18:30:51,606 | INFO     | left removable region: 30
[2025-06-04 20:44:33] 2025-06-04 18:30:51,606 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 20:44:33] 2025-06-04 18:30:51,608 | INFO     | sum of deviations: 7931429901.000003
[2025-06-04 20:44:33] 2025-06-04 18:30:51,608 | INFO     | mean x: 1749055024.0
[2025-06-04 20:44:33] 2025-06-04 18:30:51,608 | INFO     | mean y: 2492954.325358852
[2025-06-04 20:44:33] 2025-06-04 18:30:51,608 | INFO     | -- intersect: -4898088619.38173
[2025-06-04 20:44:33] 2025-06-04 18:30:51,609 | INFO     | intersect: -4898088619.38173
[2025-06-04 20:44:33] 2025-06-04 18:30:51,609 | INFO     | chi2: 0.0016400290150461025
[2025-06-04 20:44:33] 2025-06-04 18:30:51,609 | INFO     | -- intersect: -4898088619.38173
[2025-06-04 20:44:33] 2025-06-04 18:30:51,609 | INFO     | current memory leak: 2.80 B/s (using 209 data points, chi2=0.00)
[2025-06-04 20:44:33] 2025-06-04 18:30:51,610 | INFO     | ..............................
[2025-06-04 20:44:33] 2025-06-04 18:30:51,610 | INFO     | . Timing measurements:
[2025-06-04 20:44:33] 2025-06-04 18:30:51,611 | INFO     | . get job = 0 s
[2025-06-04 20:44:33] 2025-06-04 18:30:51,611 | INFO     | . initial setup = 11 s
[2025-06-04 20:44:33] 2025-06-04 18:30:51,611 | INFO     | . payload setup = 178 s
[2025-06-04 20:44:33] 2025-06-04 18:30:51,611 | INFO     | . stage-in = 0 s
[2025-06-04 20:44:33] 2025-06-04 18:30:51,611 | INFO     | . payload execution = 15046 s
[2025-06-04 20:44:33] 2025-06-04 18:30:51,611 | INFO     | . stage-out = 4 s
[2025-06-04 20:44:33] 2025-06-04 18:30:51,629 | INFO     | . log creation = 1 s
[2025-06-04 20:44:33] 2025-06-04 18:30:51,630 | INFO     | ..............................
[2025-06-04 20:44:33] 2025-06-04 18:30:52,296 | INFO     | 
[2025-06-04 20:44:33] 2025-06-04 18:30:52,297 | INFO     | job summary report
[2025-06-04 20:44:33] 2025-06-04 18:30:52,297 | INFO     | --------------------------------------------------
[2025-06-04 20:44:33] 2025-06-04 18:30:52,297 | INFO     | PanDA job id: 6678213967
[2025-06-04 20:44:33] 2025-06-04 18:30:52,297 | INFO     | task id: 45006595
[2025-06-04 20:44:33] 2025-06-04 18:30:52,297 | INFO     | errors: (none)
[2025-06-04 20:44:33] 2025-06-04 18:30:52,297 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 20:44:33] 2025-06-04 18:30:52,297 | INFO     | pilot state: finished 
[2025-06-04 20:44:33] 2025-06-04 18:30:52,297 | INFO     | transexitcode: 0
[2025-06-04 20:44:33] 2025-06-04 18:30:52,298 | INFO     | exeerrorcode: 0
[2025-06-04 20:44:33] 2025-06-04 18:30:52,298 | INFO     | exeerrordiag: 
[2025-06-04 20:44:33] 2025-06-04 18:30:52,298 | INFO     | exitcode: 0
[2025-06-04 20:44:33] 2025-06-04 18:30:52,298 | INFO     | exitmsg: OK
[2025-06-04 20:44:33] 2025-06-04 18:30:52,298 | INFO     | cpuconsumptiontime: 53728 s
[2025-06-04 20:44:33] 2025-06-04 18:30:52,298 | INFO     | nevents: 400
[2025-06-04 20:44:33] 2025-06-04 18:30:52,298 | INFO     | neventsw: 0
[2025-06-04 20:44:33] 2025-06-04 18:30:52,298 | INFO     | pid: 19307
[2025-06-04 20:44:33] 2025-06-04 18:30:52,298 | INFO     | pgrp: 19307
[2025-06-04 20:44:33] 2025-06-04 18:30:52,299 | INFO     | corecount: 8
[2025-06-04 20:44:33] 2025-06-04 18:30:52,299 | INFO     | event service: False
[2025-06-04 20:44:33] 2025-06-04 18:30:52,299 | INFO     | sizes: {0: 2396513, 1: 2397369, 2: 2397397, 12: 2397397, 23: 2397425, 34: 2397453, 45: 2397609, 55: 2397637, 66: 2397665, 77: 2397693, 85: 2397955, 88: 2398263, 15
[2025-06-04 20:44:33] 2025-06-04 18:30:52,299 | INFO     | --------------------------------------------------
[2025-06-04 20:44:33] 2025-06-04 18:30:52,299 | INFO     | 
[2025-06-04 20:44:33] 2025-06-04 18:30:52,299 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-04 20:44:33] 2025-06-04 18:30:52,762 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,763 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,763 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,763 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,763 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,763 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,763 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,763 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,764 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,764 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,764 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,764 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,764 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,764 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,764 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,764 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,765 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,765 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 20:44:33] 2025-06-04 18:30:52,765 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,765 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 20:44:33] 2025-06-04 18:30:52,765 | INFO     | job 6678213967 has completed (purged errors)
[2025-06-04 20:44:33] 2025-06-04 18:30:52,765 | INFO     | overall cleanup function is called
[2025-06-04 20:44:33] 2025-06-04 18:30:53,780 | INFO     | --- collectZombieJob: --- 10, [19307]
[2025-06-04 20:44:33] 2025-06-04 18:30:53,781 | INFO     | zombie collector waiting for pid 19307
[2025-06-04 20:44:33] 2025-06-04 18:30:53,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 20:44:33] 2025-06-04 18:30:53,781 | INFO     | collected zombie processes
[2025-06-04 20:44:33] 2025-06-04 18:30:53,781 | INFO     | will attempt to kill all subprocesses of pid=19307
[2025-06-04 20:44:33] 2025-06-04 18:30:53,907 | INFO     | process IDs to be killed: [19307] (in reverse order)
[2025-06-04 20:44:33] 2025-06-04 18:30:54,546 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 20:44:33] 2025-06-04 18:30:54,546 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 20:44:33] 2025-06-04 18:30:54,550 | INFO     | did not find any defunct processes belonging to 19307
[2025-06-04 20:44:33] 2025-06-04 18:30:54,553 | INFO     | did not find any defunct processes belonging to 19307
[2025-06-04 20:44:33] 2025-06-04 18:30:54,554 | INFO     | ready for new job
[2025-06-04 20:44:33] 2025-06-04 18:30:54,554 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 20:44:33] 2025-06-04 18:30:54,556 | INFO     | **************************************
[2025-06-04 20:44:33] 2025-06-04 18:30:54,556 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 20:44:33] 2025-06-04 18:30:54,556 | INFO     | **************************************
[2025-06-04 20:44:33] 2025-06-04 18:30:54,557 | INFO     | 
[2025-06-04 20:44:33] 2025-06-04 18:30:54,557 | INFO     | pilot is running in a VM
[2025-06-04 20:44:33] 2025-06-04 18:30:54,557 | INFO     | architecture information:
[2025-06-04 20:44:33] 2025-06-04 18:30:54,562 | INFO     | executing command: cat /etc/os-release
[2025-06-04 20:44:33] 2025-06-04 18:30:54,764 | INFO     | cat /etc/os-release:
[2025-06-04 20:44:33] NAME="CentOS Linux"
[2025-06-04 20:44:33] VERSION="7 (Core)"
[2025-06-04 20:44:33] ID="centos"
[2025-06-04 20:44:33] ID_LIKE="rhel fedora"
[2025-06-04 20:44:33] VERSION_ID="7"
[2025-06-04 20:44:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 20:44:33] ANSI_COLOR="0;31"
[2025-06-04 20:44:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 20:44:33] HOME_URL="https://www.centos.org/"
[2025-06-04 20:44:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 20:44:33] 
[2025-06-04 20:44:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 20:44:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 20:44:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 20:44:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 20:44:33] 
[2025-06-04 20:44:33] 2025-06-04 18:30:54,764 | INFO     | **************************************
[2025-06-04 20:44:33] 2025-06-04 18:30:55,267 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-04 20:44:33] 2025-06-04 18:30:55,450 | INFO     | sufficient remaining disk space (496738762752 B)
[2025-06-04 20:44:33] 2025-06-04 18:30:55,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 20:44:33] 2025-06-04 18:30:55,451 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 20:44:33] 2025-06-04 18:30:55,451 | INFO     | update_server=False
[2025-06-04 20:44:33] 2025-06-04 18:30:55,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 20:44:33] 2025-06-04 18:30:55,452 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 20:44:33] 2025-06-04 18:30:55,453 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 20:44:33] 2025-06-04 18:30:55,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 20:44:33] 2025-06-04 18:30:55,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 20:44:33] 2025-06-04 18:30:55,453 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 20:44:33] 2025-06-04 18:30:55,759 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 20:44:33] 2025-06-04 18:30:55,760 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 20:44:33] 2025-06-04 18:30:55,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:44:33] 2025-06-04 18:30:55,760 | INFO     | will abort loop
[2025-06-04 20:44:33] 2025-06-04 18:30:55,789 | INFO     | all data control threads have been joined
[2025-06-04 20:44:33] 2025-06-04 18:30:55,879 | INFO     | all payload control threads have been joined
[2025-06-04 20:44:33] 2025-06-04 18:30:56,457 | INFO     | [job] retrieve thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:56,766 | INFO     | [job] job monitor thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:56,795 | INFO     | [data] control thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:56,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 20:44:33] 2025-06-04 18:30:56,885 | INFO     | [payload] control thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:56,976 | INFO     | [payload] validate_post thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:56,995 | INFO     | all job control threads have been joined
[2025-06-04 20:44:33] 2025-06-04 18:30:57,022 | INFO     | [data] copytool_in thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:57,075 | INFO     | [payload] failed_post thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:57,144 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:57,326 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:57,460 | INFO     | [data] copytool_out thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:57,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:57,706 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:57,826 | INFO     | [job] queue monitor thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:57,844 | INFO     | [job] validate thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:58,001 | INFO     | [job] control thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:30:58,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 20:44:33] 2025-06-04 18:31:02,135 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 20:44:33] 2025-06-04 18:31:02,968 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369860290368)>', '<ExcThread(monitor, started 140369555597056)>']
[2025-06-04 20:44:33] 2025-06-04 18:31:03,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 20:44:33] 2025-06-04 18:31:03,502 | INFO     | [monitor] control thread has ended
[2025-06-04 20:44:33] 2025-06-04 18:31:07,993 | INFO     | all workflow threads have been joined
[2025-06-04 20:44:33] 2025-06-04 18:31:07,994 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 20:44:33] 2025-06-04 18:31:07,994 | INFO     | traces error code: 0
[2025-06-04 20:44:33] 2025-06-04 18:31:07,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 20:44:33] 2025-06-04 18:31:08,424 [wrapper] ==== pilot stdout END ====
[2025-06-04 20:44:33] 2025-06-04 18:31:08,551 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 20:44:33] 2025-06-04 18:31:08,662 [wrapper] pilotpid: 12698
[2025-06-04 20:44:33] 2025-06-04 18:31:08,755 [wrapper] Pilot exit status: 0
[2025-06-04 20:44:33] 2025-06-04 18:31:09,082 [wrapper] pandaids: 6678213967
[2025-06-04 20:44:33] 2025-06-04 18:31:09,698 [wrapper] cleanup supervisor_pilot  3867 12699
[2025-06-04 20:44:33] 2025-06-04 18:31:09,706 [wrapper] Test setup, not cleaning
[2025-06-04 20:44:33] 2025-06-04 18:31:09,720 [wrapper] apfmon messages muted
[2025-06-04 20:44:33] 2025-06-04 18:31:09,733 [wrapper] ==== wrapper stdout END ====
[2025-06-04 20:44:33] 2025-06-04 18:31:09,865 [wrapper] ==== wrapper stderr END ====
[2025-06-04 20:44:33]  *** Error codes and diagnostics ***
[2025-06-04 20:44:33]     "exeErrorCode": 0,
[2025-06-04 20:44:33]     "exeErrorDiag": "",
[2025-06-04 20:44:33]     "pilotErrorCode": 0,
[2025-06-04 20:44:33]     "pilotErrorDiag": "",
[2025-06-04 20:44:33]  *** Listing of results directory ***
[2025-06-04 20:44:33] total 396344
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-04 20:44:33] -rwx------. 1 boinc boinc     37140 Jun  4 02:31 runpilot2-wrapper.sh
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc      5111 Jun  4 02:31 queuedata.json
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc       100 Jun  4 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 20:44:33] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 16:08 run_atlas
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc       105 Jun  4 16:08 job.xml
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc      6390 Jun  4 16:08 init_data.xml
[2025-06-04 20:44:33] -rw-r--r--. 2 boinc boinc 215977160 Jun  4 16:08 EVNT.45006593._001958.pool.root.1
[2025-06-04 20:44:33] -rw-r--r--. 2 boinc boinc     15093 Jun  4 16:08 start_atlas.sh
[2025-06-04 20:44:33] drwxrwx--x. 2 boinc boinc        68 Jun  4 16:08 shared
[2025-06-04 20:44:33] -rw-r--r--. 2 boinc boinc    508879 Jun  4 16:08 input.tar.gz
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc         0 Jun  4 16:08 boinc_lockfile
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc      2524 Jun  4 16:09 pandaJob.out
[2025-06-04 20:44:33] -rw-------. 1 boinc boinc    986819 Jun  4 16:12 agis_schedconf.cvmfs.json
[2025-06-04 20:44:33] drwx------. 4 boinc boinc      4096 Jun  4 16:12 pilot3
[2025-06-04 20:44:33] -rw-------. 1 boinc boinc 182638033 Jun  4 20:28 HITS.45006595._048807.pool.root.1
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc       531 Jun  4 20:28 boinc_task_state.xml
[2025-06-04 20:44:33] -rw-------. 1 boinc boinc      1021 Jun  4 20:29 memory_monitor_summary.json
[2025-06-04 20:44:33] -rw-------. 1 boinc boinc   1598969 Jun  4 20:29 agis_ddmendpoints.agis.ALL.json
[2025-06-04 20:44:33] -rw-------. 1 boinc boinc    385353 Jun  4 20:29 log.45006595._048807.job.log.tgz.1
[2025-06-04 20:44:33] -rw-------. 1 boinc boinc        95 Jun  4 20:30 pilot_heartbeat.json
[2025-06-04 20:44:33] -rw-------. 1 boinc boinc      7695 Jun  4 20:30 heartbeat.json
[2025-06-04 20:44:33] -rw-------. 1 boinc boinc      4725 Jun  4 20:31 pilotlog.txt
[2025-06-04 20:44:33] -rw-------. 1 boinc boinc   1323816 Jun  4 20:31 log.45006595._048807.job.log.1
[2025-06-04 20:44:33] -rw-------. 1 boinc boinc       357 Jun  4 20:31 output.list
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc       620 Jun  4 20:31 runtime_log
[2025-06-04 20:44:33] -rw-------. 1 boinc boinc   1730560 Jun  4 20:31 result.tar.gz
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc      8659 Jun  4 20:31 runtime_log.err
[2025-06-04 20:44:33] -rw-------. 1 boinc boinc       657 Jun  4 20:31 9C0NDmZDrg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0LaKDmIf18zm.diag
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc      8192 Jun  4 20:44 boinc_mmap_file
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc        28 Jun  4 20:44 wrapper_checkpoint.txt
[2025-06-04 20:44:33] -rw-r--r--. 1 boinc boinc     20526 Jun  4 20:44 stderr.txt
[2025-06-04 20:44:33] HITS file was successfully produced:
[2025-06-04 20:44:34] -rw-------. 1 boinc boinc 182638033 Jun  4 20:28 shared/HITS.pool.root.1
[2025-06-04 20:44:34]  *** Contents of shared directory: ***
[2025-06-04 20:44:34] total 391484
[2025-06-04 20:44:34] -rw-r--r--. 2 boinc boinc 215977160 Jun  4 16:08 ATLAS.root_0
[2025-06-04 20:44:34] -rw-r--r--. 2 boinc boinc     15093 Jun  4 16:08 start_atlas.sh
[2025-06-04 20:44:34] -rw-r--r--. 2 boinc boinc    508879 Jun  4 16:08 input.tar.gz
[2025-06-04 20:44:34] -rw-------. 1 boinc boinc 182638033 Jun  4 20:28 HITS.pool.root.1
[2025-06-04 20:44:34] -rw-------. 1 boinc boinc   1730560 Jun  4 20:31 result.tar.gz
20:44:35 (4337): run_atlas exited; CPU time 53945.618638
20:44:35 (4337): called boinc_finish(0)

</stderr_txt>
]]>

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