Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:24:43 (12801): wrapper (7.7.26015): starting
15:24:43 (12801): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 15:24:43] Arguments: --nthreads 8
[2025-06-04 15:24:43] Threads: 8
[2025-06-04 15:24:43] Checking for CVMFS
[2025-06-04 15:24:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:24:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:24:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:24:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:24:45] 2.11.2.0 24901 33252 90892 146780 3 60 15639824 25165825 3522 130560 0 17451203 99.786 19723298 2146 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 15:24:45] CVMFS is ok
[2025-06-04 15:24:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:24:45] Checking for apptainer binary...
[2025-06-04 15:24:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:24:45] Running /usr/bin/apptainer --version
[2025-06-04 15:24:45] apptainer version 1.3.2-1.el7
[2025-06-04 15:24:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:25:05] cg-vwn281.simple-grid.lan
[2025-06-04 15:25:05] apptainer works
[2025-06-04 15:25:05] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:25:05] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:25:06] Starting ATLAS job with PandaID=6678214333
[2025-06-04 15:25:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:30:53]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:30:54] 2025-06-04 17:25:32,958 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6678214333/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:30:54] 2025-06-04 17:25:32,958 | INFO     | extracted standard info from prmon json
[2025-06-04 19:30:54] 2025-06-04 17:25:32,959 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:30:54] 2025-06-04 17:25:32,959 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:30:54] 2025-06-04 17:25:32,959 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:30:54] 2025-06-04 17:25:32,959 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:30:54] 2025-06-04 17:25:32,966 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:30:54] 2025-06-04 17:25:32,967 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 19:30:54] 2025-06-04 17:25:32,968 | INFO     | sum of deviations: 29354754829.000023
[2025-06-04 19:30:54] 2025-06-04 17:25:32,968 | INFO     | mean x: 1749051012.5
[2025-06-04 19:30:54] 2025-06-04 17:25:32,969 | INFO     | mean y: 2475677.776785714
[2025-06-04 19:30:54] 2025-06-04 17:25:32,971 | INFO     | -- intersect: -14729707502.68863
[2025-06-04 19:30:54] 2025-06-04 17:25:32,971 | INFO     | intersect: -14729707502.68863
[2025-06-04 19:30:54] 2025-06-04 17:25:32,972 | INFO     | chi2: 6.420589799379526
[2025-06-04 19:30:54] 2025-06-04 17:25:32,972 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 19:30:54] 2025-06-04 17:25:32,974 | INFO     | sum of deviations: 43785674339.999985
[2025-06-04 19:30:54] 2025-06-04 17:25:32,974 | INFO     | mean x: 1749050860.0
[2025-06-04 19:30:54] 2025-06-04 17:25:32,974 | INFO     | mean y: 2485142.1689497717
[2025-06-04 19:30:54] 2025-06-04 17:25:32,974 | INFO     | -- intersect: -23511853464.039646
[2025-06-04 19:30:54] 2025-06-04 17:25:32,974 | INFO     | intersect: -23511853464.039646
[2025-06-04 19:30:54] 2025-06-04 17:25:32,975 | INFO     | chi2: 5.707993228487382
[2025-06-04 19:30:54] 2025-06-04 17:25:32,975 | INFO     | current chi2=5.707993228487382 (change=11.09861544123264 %)
[2025-06-04 19:30:54] 2025-06-04 17:25:32,975 | INFO     | right removable region: 218
[2025-06-04 19:30:54] 2025-06-04 17:25:32,975 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 19:30:54] 2025-06-04 17:25:32,980 | INFO     | sum of deviations: -46039427432.0
[2025-06-04 19:30:54] 2025-06-04 17:25:32,981 | INFO     | mean x: 1749051165.0
[2025-06-04 19:30:54] 2025-06-04 17:25:32,981 | INFO     | mean y: 2526004.8630136987
[2025-06-04 19:30:54] 2025-06-04 17:25:32,981 | INFO     | -- intersect: 24727208014.951694
[2025-06-04 19:30:54] 2025-06-04 17:25:32,981 | INFO     | intersect: 24727208014.951694
[2025-06-04 19:30:54] 2025-06-04 17:25:32,982 | INFO     | chi2: 1.9517950932495252
[2025-06-04 19:30:54] 2025-06-04 17:25:32,982 | INFO     | current chi2=1.9517950932495252 (change=69.60099999787958 %)
[2025-06-04 19:30:54] 2025-06-04 17:25:32,982 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 19:30:54] 2025-06-04 17:25:32,984 | INFO     | sum of deviations: -74715117512.0
[2025-06-04 19:30:54] 2025-06-04 17:25:32,984 | INFO     | mean x: 1749051317.5
[2025-06-04 19:30:54] 2025-06-04 17:25:32,984 | INFO     | mean y: 2545905.186915888
[2025-06-04 19:30:54] 2025-06-04 17:25:32,984 | INFO     | -- intersect: 43005746019.276825
[2025-06-04 19:30:54] 2025-06-04 17:25:32,984 | INFO     | intersect: 43005746019.276825
[2025-06-04 19:30:54] 2025-06-04 17:25:32,985 | INFO     | chi2: 1.029676095915427
[2025-06-04 19:30:54] 2025-06-04 17:25:32,985 | INFO     | current chi2=1.029676095915427 (change=47.24466213299425 %)
[2025-06-04 19:30:54] 2025-06-04 17:25:32,985 | INFO     | sum of square deviations: 2830787960.0
[2025-06-04 19:30:54] 2025-06-04 17:25:32,987 | INFO     | sum of deviations: -73227347764.0
[2025-06-04 19:30:54] 2025-06-04 17:25:32,987 | INFO     | mean x: 1749051470.0
[2025-06-04 19:30:54] 2025-06-04 17:25:32,987 | INFO     | mean y: 2544773.995215311
[2025-06-04 19:30:54] 2025-06-04 17:25:32,987 | INFO     | -- intersect: 45247332465.83824
[2025-06-04 19:30:54] 2025-06-04 17:25:32,987 | INFO     | intersect: 45247332465.83824
[2025-06-04 19:30:54] 2025-06-04 17:25:32,988 | INFO     | chi2: 1.0095783323566339
[2025-06-04 19:30:54] 2025-06-04 17:25:32,988 | INFO     | current chi2=1.0095783323566339 (change=1.9518529796426247 %)
[2025-06-04 19:30:54] 2025-06-04 17:25:32,991 | INFO     | left removable region: 30
[2025-06-04 19:30:54] 2025-06-04 17:25:32,992 | INFO     | sum of square deviations: 2060343747.0
[2025-06-04 19:30:54] 2025-06-04 17:25:32,993 | INFO     | sum of deviations: -38336994855.50001
[2025-06-04 19:30:54] 2025-06-04 17:25:32,993 | INFO     | mean x: 1749051744.5
[2025-06-04 19:30:54] 2025-06-04 17:25:32,993 | INFO     | mean y: 2540631.579787234
[2025-06-04 19:30:54] 2025-06-04 17:25:32,993 | INFO     | -- intersect: 32547298188.921413
[2025-06-04 19:30:54] 2025-06-04 17:25:32,993 | INFO     | intersect: 32547298188.921413
[2025-06-04 19:30:54] 2025-06-04 17:25:32,994 | INFO     | chi2: 0.19668021670861938
[2025-06-04 19:30:54] 2025-06-04 17:25:32,994 | INFO     | -- intersect: 32547298188.921413
[2025-06-04 19:30:54] 2025-06-04 17:25:32,994 | INFO     | current memory leak: -18.61 B/s (using 188 data points, chi2=0.20)
[2025-06-04 19:30:54] 2025-06-04 17:25:32,995 | INFO     | ..............................
[2025-06-04 19:30:54] 2025-06-04 17:25:32,995 | INFO     | . Timing measurements:
[2025-06-04 19:30:54] 2025-06-04 17:25:32,995 | INFO     | . get job = 0 s
[2025-06-04 19:30:54] 2025-06-04 17:25:32,995 | INFO     | . initial setup = 21 s
[2025-06-04 19:30:54] 2025-06-04 17:25:32,995 | INFO     | . payload setup = 162 s
[2025-06-04 19:30:54] 2025-06-04 17:25:32,995 | INFO     | . stage-in = 0 s
[2025-06-04 19:30:54] 2025-06-04 17:25:32,996 | INFO     | . payload execution = 13788 s
[2025-06-04 19:30:54] 2025-06-04 17:25:32,996 | INFO     | . stage-out = 3 s
[2025-06-04 19:30:54] 2025-06-04 17:25:32,999 | INFO     | . log creation = 1 s
[2025-06-04 19:30:54] 2025-06-04 17:25:32,999 | INFO     | ..............................
[2025-06-04 19:30:54] 2025-06-04 17:25:33,139 | INFO     | 
[2025-06-04 19:30:54] 2025-06-04 17:25:33,139 | INFO     | job summary report
[2025-06-04 19:30:54] 2025-06-04 17:25:33,139 | INFO     | --------------------------------------------------
[2025-06-04 19:30:54] 2025-06-04 17:25:33,139 | INFO     | PanDA job id: 6678214333
[2025-06-04 19:30:54] 2025-06-04 17:25:33,140 | INFO     | task id: 45006595
[2025-06-04 19:30:54] 2025-06-04 17:25:33,140 | INFO     | errors: (none)
[2025-06-04 19:30:54] 2025-06-04 17:25:33,140 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:30:54] 2025-06-04 17:25:33,140 | INFO     | pilot state: finished 
[2025-06-04 19:30:54] 2025-06-04 17:25:33,140 | INFO     | transexitcode: 0
[2025-06-04 19:30:54] 2025-06-04 17:25:33,140 | INFO     | exeerrorcode: 0
[2025-06-04 19:30:54] 2025-06-04 17:25:33,140 | INFO     | exeerrordiag: 
[2025-06-04 19:30:54] 2025-06-04 17:25:33,140 | INFO     | exitcode: 0
[2025-06-04 19:30:54] 2025-06-04 17:25:33,140 | INFO     | exitmsg: OK
[2025-06-04 19:30:54] 2025-06-04 17:25:33,141 | INFO     | cpuconsumptiontime: 51470 s
[2025-06-04 19:30:54] 2025-06-04 17:25:33,141 | INFO     | nevents: 400
[2025-06-04 19:30:54] 2025-06-04 17:25:33,141 | INFO     | neventsw: 0
[2025-06-04 19:30:54] 2025-06-04 17:25:33,141 | INFO     | pid: 31404
[2025-06-04 19:30:54] 2025-06-04 17:25:33,141 | INFO     | pgrp: 31404
[2025-06-04 19:30:54] 2025-06-04 17:25:33,141 | INFO     | corecount: 8
[2025-06-04 19:30:54] 2025-06-04 17:25:33,141 | INFO     | event service: False
[2025-06-04 19:30:54] 2025-06-04 17:25:33,141 | INFO     | sizes: {0: 2397171, 1: 2397370, 12: 2397370, 23: 2397398, 33: 2397426, 44: 2397482, 55: 2397638, 66: 2397666, 76: 2397694, 80: 2397956, 87: 2397984, 13954: 2427967
[2025-06-04 19:30:54] 2025-06-04 17:25:33,141 | INFO     | --------------------------------------------------
[2025-06-04 19:30:54] 2025-06-04 17:25:33,142 | INFO     | 
[2025-06-04 19:30:54] 2025-06-04 17:25:33,142 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 19:30:54] 2025-06-04 17:25:33,720 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,721 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,721 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,721 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,721 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,722 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,722 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,722 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:30:54] 2025-06-04 17:25:33,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,723 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:30:54] 2025-06-04 17:25:33,723 | INFO     | job 6678214333 has completed (purged errors)
[2025-06-04 19:30:54] 2025-06-04 17:25:33,723 | INFO     | overall cleanup function is called
[2025-06-04 19:30:54] 2025-06-04 17:25:34,732 | INFO     | --- collectZombieJob: --- 10, [31404]
[2025-06-04 19:30:54] 2025-06-04 17:25:34,732 | INFO     | zombie collector waiting for pid 31404
[2025-06-04 19:30:54] 2025-06-04 17:25:34,732 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:30:54] 2025-06-04 17:25:34,733 | INFO     | collected zombie processes
[2025-06-04 19:30:54] 2025-06-04 17:25:34,733 | INFO     | will attempt to kill all subprocesses of pid=31404
[2025-06-04 19:30:54] 2025-06-04 17:25:34,879 | INFO     | process IDs to be killed: [31404] (in reverse order)
[2025-06-04 19:30:54] 2025-06-04 17:25:35,737 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:30:54] 2025-06-04 17:25:35,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:30:54] 2025-06-04 17:25:35,741 | INFO     | did not find any defunct processes belonging to 31404
[2025-06-04 19:30:54] 2025-06-04 17:25:35,744 | INFO     | did not find any defunct processes belonging to 31404
[2025-06-04 19:30:54] 2025-06-04 17:25:35,744 | INFO     | ready for new job
[2025-06-04 19:30:54] 2025-06-04 17:25:35,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:30:54] 2025-06-04 17:25:35,747 | INFO     | **************************************
[2025-06-04 19:30:54] 2025-06-04 17:25:35,747 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:30:54] 2025-06-04 17:25:35,747 | INFO     | **************************************
[2025-06-04 19:30:54] 2025-06-04 17:25:35,747 | INFO     | 
[2025-06-04 19:30:54] 2025-06-04 17:25:35,748 | INFO     | pilot is running in a VM
[2025-06-04 19:30:54] 2025-06-04 17:25:35,748 | INFO     | architecture information:
[2025-06-04 19:30:54] 2025-06-04 17:25:35,762 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:30:54] 2025-06-04 17:25:36,062 | INFO     | cat /etc/os-release:
[2025-06-04 19:30:54] NAME="CentOS Linux"
[2025-06-04 19:30:54] VERSION="7 (Core)"
[2025-06-04 19:30:54] ID="centos"
[2025-06-04 19:30:54] ID_LIKE="rhel fedora"
[2025-06-04 19:30:54] VERSION_ID="7"
[2025-06-04 19:30:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:30:54] ANSI_COLOR="0;31"
[2025-06-04 19:30:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:30:54] HOME_URL="https://www.centos.org/"
[2025-06-04 19:30:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:30:54] 
[2025-06-04 19:30:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:30:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:30:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:30:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:30:54] 
[2025-06-04 19:30:54] 2025-06-04 17:25:36,063 | INFO     | **************************************
[2025-06-04 19:30:54] 2025-06-04 17:25:36,566 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 19:30:54] 2025-06-04 17:25:36,747 | INFO     | sufficient remaining disk space (496639148032 B)
[2025-06-04 19:30:54] 2025-06-04 17:25:36,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:30:54] 2025-06-04 17:25:36,747 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:30:54] 2025-06-04 17:25:36,747 | INFO     | update_server=False
[2025-06-04 19:30:54] 2025-06-04 17:25:36,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:30:54] 2025-06-04 17:25:36,748 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:30:54] 2025-06-04 17:25:36,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:30:54] 2025-06-04 17:25:36,997 | INFO     | all payload control threads have been joined
[2025-06-04 19:30:54] 2025-06-04 17:25:37,074 | INFO     | all data control threads have been joined
[2025-06-04 19:30:54] 2025-06-04 17:25:37,255 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:30:54] 2025-06-04 17:25:37,255 | INFO     | aborting loop
[2025-06-04 19:30:54] 2025-06-04 17:25:37,437 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:30:54] 2025-06-04 17:25:37,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:30:54] 2025-06-04 17:25:37,438 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:30:54] 2025-06-04 17:25:37,587 | INFO     | all job control threads have been joined
[2025-06-04 19:30:54] 2025-06-04 17:25:37,753 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:37,830 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:37,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:37,892 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:38,003 | INFO     | [payload] control thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:38,040 | INFO     | [job] validate thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:38,061 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:38,080 | INFO     | [data] control thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:38,153 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:30:54] 2025-06-04 17:25:38,261 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:38,593 | INFO     | [job] control thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:38,674 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:38,741 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:38,761 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:39,130 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:39,159 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:40,757 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:30:54] 2025-06-04 17:25:40,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140494061950784)>', '<ExcThread(monitor, started 140493405021952)>']
[2025-06-04 19:30:54] 2025-06-04 17:25:41,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:30:54] 2025-06-04 17:25:41,461 | INFO     | [monitor] control thread has ended
[2025-06-04 19:30:54] 2025-06-04 17:25:45,911 | INFO     | all workflow threads have been joined
[2025-06-04 19:30:54] 2025-06-04 17:25:45,911 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:30:54] 2025-06-04 17:25:45,912 | INFO     | traces error code: 0
[2025-06-04 19:30:54] 2025-06-04 17:25:45,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:30:54] 2025-06-04 17:25:46,270 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:30:54] 2025-06-04 17:25:46,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:30:54] 2025-06-04 17:25:46,437 [wrapper] pilotpid: 18782
[2025-06-04 19:30:54] 2025-06-04 17:25:46,540 [wrapper] Pilot exit status: 0
[2025-06-04 19:30:54] 2025-06-04 17:25:47,022 [wrapper] pandaids: 6678214333
[2025-06-04 19:30:54] 2025-06-04 17:25:47,865 [wrapper] cleanup supervisor_pilot  8491 18783
[2025-06-04 19:30:54] 2025-06-04 17:25:47,967 [wrapper] Test setup, not cleaning
[2025-06-04 19:30:54] 2025-06-04 17:25:48,090 [wrapper] apfmon messages muted
[2025-06-04 19:30:54] 2025-06-04 17:25:48,131 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:30:54] 2025-06-04 17:25:48,184 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:30:54]  *** Error codes and diagnostics ***
[2025-06-04 19:30:54]     "exeErrorCode": 0,
[2025-06-04 19:30:54]     "exeErrorDiag": "",
[2025-06-04 19:30:54]     "pilotErrorCode": 0,
[2025-06-04 19:30:54]     "pilotErrorDiag": "",
[2025-06-04 19:30:54]  *** Listing of results directory ***
[2025-06-04 19:30:54] total 395952
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc      5111 Jun  4 02:31 queuedata.json
[2025-06-04 19:30:54] -rwx------. 1 boinc boinc     37140 Jun  4 02:31 runpilot2-wrapper.sh
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc       100 Jun  4 15:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:30:54] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 15:24 run_atlas
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc       105 Jun  4 15:24 job.xml
[2025-06-04 19:30:54] -rw-r--r--. 2 boinc boinc 218135611 Jun  4 15:24 EVNT.45006593._001959.pool.root.1
[2025-06-04 19:30:54] drwxrwx--x. 2 boinc boinc        68 Jun  4 15:24 shared
[2025-06-04 19:30:54] -rw-r--r--. 2 boinc boinc    508882 Jun  4 15:24 input.tar.gz
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc      6390 Jun  4 15:24 init_data.xml
[2025-06-04 19:30:54] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:24 start_atlas.sh
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc         0 Jun  4 15:24 boinc_lockfile
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc      2525 Jun  4 15:25 pandaJob.out
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc    986819 Jun  4 15:28 agis_schedconf.cvmfs.json
[2025-06-04 19:30:54] drwx------. 4 boinc boinc      4096 Jun  4 15:28 pilot3
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc 180302677 Jun  4 19:22 HITS.45006595._048848.pool.root.1
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc       531 Jun  4 19:23 boinc_task_state.xml
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc      1013 Jun  4 19:23 memory_monitor_summary.json
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc   1598969 Jun  4 19:24 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc    391281 Jun  4 19:24 log.45006595._048848.job.log.tgz.1
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc        95 Jun  4 19:24 pilot_heartbeat.json
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc      7693 Jun  4 19:25 heartbeat.json
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc      4416 Jun  4 19:25 pilotlog.txt
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc   1204344 Jun  4 19:25 log.45006595._048848.job.log.1
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc       357 Jun  4 19:25 output.list
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc       620 Jun  4 19:25 runtime_log
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc   1617920 Jun  4 19:25 result.tar.gz
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc      8659 Jun  4 19:25 runtime_log.err
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc       657 Jun  4 19:25 lgLNDmcDrg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTcmKDmRdFrnm.diag
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc      8192 Jun  4 19:30 boinc_mmap_file
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc        28 Jun  4 19:30 wrapper_checkpoint.txt
[2025-06-04 19:30:54] -rw-r--r--. 1 boinc boinc     20528 Jun  4 19:30 stderr.txt
[2025-06-04 19:30:54] HITS file was successfully produced:
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc 180302677 Jun  4 19:22 shared/HITS.pool.root.1
[2025-06-04 19:30:54]  *** Contents of shared directory: ***
[2025-06-04 19:30:54] total 391200
[2025-06-04 19:30:54] -rw-r--r--. 2 boinc boinc 218135611 Jun  4 15:24 ATLAS.root_0
[2025-06-04 19:30:54] -rw-r--r--. 2 boinc boinc    508882 Jun  4 15:24 input.tar.gz
[2025-06-04 19:30:54] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:24 start_atlas.sh
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc 180302677 Jun  4 19:22 HITS.pool.root.1
[2025-06-04 19:30:54] -rw-------. 1 boinc boinc   1617920 Jun  4 19:25 result.tar.gz
19:30:55 (12801): run_atlas exited; CPU time 51673.180706
19:30:55 (12801): called boinc_finish(0)

</stderr_txt>
]]>

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