Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:08:40 (23460): wrapper (7.7.26015): starting
01:08:40 (23460): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:08:40] Arguments: --nthreads 8
[2025-06-04 01:08:40] Threads: 8
[2025-06-04 01:08:40] Checking for CVMFS
[2025-06-04 01:08:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:08:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:08:41] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:08:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:08:41] 2.11.2.0 2876 18206 71684 146768 3 58 10825221 20275200 1 130560 0 7966308 99.983 3243443 4166 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 01:08:41] CVMFS is ok
[2025-06-04 01:08:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:08:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:08:41] Further information can be found at the LHC@home message board.
[2025-06-04 01:08:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:08:41] Checking for apptainer binary...
[2025-06-04 01:08:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:08:41] Running /usr/bin/apptainer --version
[2025-06-04 01:08:41] apptainer version 1.3.2-1.el7
[2025-06-04 01:08:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:08:42] c-204-5.aglt2.org
[2025-06-04 01:08:42] apptainer works
[2025-06-04 01:08:42] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:08:42] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:08:43] Starting ATLAS job with PandaID=6678285997
[2025-06-04 01:08:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 03:05:20]  *** The last 200 lines of the pilot log: ***
[2025-06-04 03:05:20] 2025-06-04 07:05:05,953 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678285997/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 03:05:20] 2025-06-04 07:05:05,955 | INFO     | extracted standard info from prmon json
[2025-06-04 03:05:20] 2025-06-04 07:05:05,955 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 03:05:20] 2025-06-04 07:05:05,955 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 03:05:20] 2025-06-04 07:05:05,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 03:05:20] 2025-06-04 07:05:05,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 03:05:20] 2025-06-04 07:05:05,960 | INFO     | fitting pss+swap vs Time
[2025-06-04 03:05:20] 2025-06-04 07:05:05,960 | INFO     | sum of square deviations: 459366752.5
[2025-06-04 03:05:20] 2025-06-04 07:05:05,961 | INFO     | sum of deviations: 16300329841.999998
[2025-06-04 03:05:20] 2025-06-04 07:05:05,961 | INFO     | mean x: 1749017216.5
[2025-06-04 03:05:20] 2025-06-04 07:05:05,962 | INFO     | mean y: 2471568.1403508773
[2025-06-04 03:05:20] 2025-06-04 07:05:05,962 | INFO     | -- intersect: -62060264520.46398
[2025-06-04 03:05:20] 2025-06-04 07:05:05,962 | INFO     | intersect: -62060264520.46398
[2025-06-04 03:05:20] 2025-06-04 07:05:05,962 | INFO     | chi2: 1.4284506483907182
[2025-06-04 03:05:20] 2025-06-04 07:05:05,963 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 03:05:20] 2025-06-04 07:05:05,963 | INFO     | sum of deviations: 15614030432.0
[2025-06-04 03:05:20] 2025-06-04 07:05:05,963 | INFO     | mean x: 1749017064.0
[2025-06-04 03:05:20] 2025-06-04 07:05:05,964 | INFO     | mean y: 2469757.2660550456
[2025-06-04 03:05:20] 2025-06-04 07:05:05,964 | INFO     | -- intersect: -68009868411.766365
[2025-06-04 03:05:20] 2025-06-04 07:05:05,964 | INFO     | intersect: -68009868411.766365
[2025-06-04 03:05:20] 2025-06-04 07:05:05,964 | INFO     | chi2: 1.4300790262713503
[2025-06-04 03:05:20] 2025-06-04 07:05:05,964 | INFO     | current chi2=1.4300790262713503 (change=-0.11399608957205484 %)
[2025-06-04 03:05:20] 2025-06-04 07:05:05,965 | INFO     | right removable region: 108
[2025-06-04 03:05:20] 2025-06-04 07:05:05,965 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 03:05:20] 2025-06-04 07:05:05,966 | INFO     | sum of deviations: -160855840.99999973
[2025-06-04 03:05:20] 2025-06-04 07:05:05,966 | INFO     | mean x: 1749017369.0
[2025-06-04 03:05:20] 2025-06-04 07:05:05,966 | INFO     | mean y: 2514048.4311926607
[2025-06-04 03:05:20] 2025-06-04 07:05:05,966 | INFO     | -- intersect: 703177711.7941016
[2025-06-04 03:05:20] 2025-06-04 07:05:05,966 | INFO     | intersect: 703177711.7941016
[2025-06-04 03:05:20] 2025-06-04 07:05:05,966 | INFO     | chi2: 0.012694047854628956
[2025-06-04 03:05:20] 2025-06-04 07:05:05,967 | INFO     | current chi2=0.012694047854628956 (change=99.11134151754351 %)
[2025-06-04 03:05:20] 2025-06-04 07:05:05,967 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 03:05:20] 2025-06-04 07:05:05,967 | INFO     | sum of deviations: -1616693583.5
[2025-06-04 03:05:20] 2025-06-04 07:05:05,967 | INFO     | mean x: 1749017521.5
[2025-06-04 03:05:20] 2025-06-04 07:05:05,968 | INFO     | mean y: 2518231.8173076925
[2025-06-04 03:05:20] 2025-06-04 07:05:05,968 | INFO     | -- intersect: 8109955329.104856
[2025-06-04 03:05:20] 2025-06-04 07:05:05,968 | INFO     | intersect: 8109955329.104856
[2025-06-04 03:05:20] 2025-06-04 07:05:05,968 | INFO     | chi2: 0.0035636704715843967
[2025-06-04 03:05:20] 2025-06-04 07:05:05,968 | INFO     | current chi2=0.0035636704715843967 (change=71.92644527265679 %)
[2025-06-04 03:05:20] 2025-06-04 07:05:05,968 | INFO     | sum of square deviations: 300842850.0
[2025-06-04 03:05:20] 2025-06-04 07:05:05,969 | INFO     | sum of deviations: -1823412121.9999998
[2025-06-04 03:05:20] 2025-06-04 07:05:05,969 | INFO     | mean x: 1749017674.0
[2025-06-04 03:05:20] 2025-06-04 07:05:05,969 | INFO     | mean y: 2518877.1616161615
[2025-06-04 03:05:20] 2025-06-04 07:05:05,969 | INFO     | -- intersect: 10603335976.068382
[2025-06-04 03:05:20] 2025-06-04 07:05:05,969 | INFO     | intersect: 10603335976.068382
[2025-06-04 03:05:20] 2025-06-04 07:05:05,970 | INFO     | chi2: 0.002799472178690798
[2025-06-04 03:05:20] 2025-06-04 07:05:05,970 | INFO     | current chi2=0.002799472178690798 (change=21.44413460748065 %)
[2025-06-04 03:05:20] 2025-06-04 07:05:05,970 | INFO     | left removable region: 30
[2025-06-04 03:05:20] 2025-06-04 07:05:05,970 | INFO     | sum of square deviations: 147126479.5
[2025-06-04 03:05:20] 2025-06-04 07:05:05,970 | INFO     | sum of deviations: -1182231514.5
[2025-06-04 03:05:20] 2025-06-04 07:05:05,971 | INFO     | mean x: 1749017948.5
[2025-06-04 03:05:20] 2025-06-04 07:05:05,971 | INFO     | mean y: 2517039.5
[2025-06-04 03:05:20] 2025-06-04 07:05:05,971 | INFO     | -- intersect: 14056711397.782312
[2025-06-04 03:05:20] 2025-06-04 07:05:05,971 | INFO     | intersect: 14056711397.782312
[2025-06-04 03:05:20] 2025-06-04 07:05:05,971 | INFO     | chi2: 0.002507448897793823
[2025-06-04 03:05:20] 2025-06-04 07:05:05,971 | INFO     | -- intersect: 14056711397.782312
[2025-06-04 03:05:20] 2025-06-04 07:05:05,972 | INFO     | current memory leak: -8.04 B/s (using 78 data points, chi2=0.00)
[2025-06-04 03:05:20] 2025-06-04 07:05:05,972 | INFO     | ..............................
[2025-06-04 03:05:20] 2025-06-04 07:05:05,972 | INFO     | . Timing measurements:
[2025-06-04 03:05:20] 2025-06-04 07:05:05,972 | INFO     | . get job = 0 s
[2025-06-04 03:05:20] 2025-06-04 07:05:05,972 | INFO     | . initial setup = 3 s
[2025-06-04 03:05:20] 2025-06-04 07:05:05,972 | INFO     | . payload setup = 10 s
[2025-06-04 03:05:20] 2025-06-04 07:05:05,973 | INFO     | . stage-in = 0 s
[2025-06-04 03:05:20] 2025-06-04 07:05:05,973 | INFO     | . payload execution = 6930 s
[2025-06-04 03:05:20] 2025-06-04 07:05:05,973 | INFO     | . stage-out = 1 s
[2025-06-04 03:05:20] 2025-06-04 07:05:05,973 | INFO     | . log creation = 0 s
[2025-06-04 03:05:20] 2025-06-04 07:05:05,973 | INFO     | ..............................
[2025-06-04 03:05:20] 2025-06-04 07:05:06,073 | INFO     | 
[2025-06-04 03:05:20] 2025-06-04 07:05:06,073 | INFO     | job summary report
[2025-06-04 03:05:20] 2025-06-04 07:05:06,073 | INFO     | --------------------------------------------------
[2025-06-04 03:05:20] 2025-06-04 07:05:06,074 | INFO     | PanDA job id: 6678285997
[2025-06-04 03:05:20] 2025-06-04 07:05:06,074 | INFO     | task id: 45006595
[2025-06-04 03:05:20] 2025-06-04 07:05:06,074 | INFO     | errors: (none)
[2025-06-04 03:05:20] 2025-06-04 07:05:06,074 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 03:05:20] 2025-06-04 07:05:06,074 | INFO     | pilot state: finished 
[2025-06-04 03:05:20] 2025-06-04 07:05:06,074 | INFO     | transexitcode: 0
[2025-06-04 03:05:20] 2025-06-04 07:05:06,075 | INFO     | exeerrorcode: 0
[2025-06-04 03:05:20] 2025-06-04 07:05:06,075 | INFO     | exeerrordiag: 
[2025-06-04 03:05:20] 2025-06-04 07:05:06,075 | INFO     | exitcode: 0
[2025-06-04 03:05:20] 2025-06-04 07:05:06,075 | INFO     | exitmsg: OK
[2025-06-04 03:05:20] 2025-06-04 07:05:06,075 | INFO     | cpuconsumptiontime: 51213 s
[2025-06-04 03:05:20] 2025-06-04 07:05:06,076 | INFO     | nevents: 400
[2025-06-04 03:05:20] 2025-06-04 07:05:06,076 | INFO     | neventsw: 0
[2025-06-04 03:05:20] 2025-06-04 07:05:06,076 | INFO     | pid: 1130
[2025-06-04 03:05:20] 2025-06-04 07:05:06,076 | INFO     | pgrp: 1130
[2025-06-04 03:05:20] 2025-06-04 07:05:06,076 | INFO     | corecount: 8
[2025-06-04 03:05:20] 2025-06-04 07:05:06,077 | INFO     | event service: False
[2025-06-04 03:05:20] 2025-06-04 07:05:06,077 | INFO     | sizes: {0: 2405184, 1: 2405184, 6: 2405418, 11: 2405446, 6945: 2432485, 6946: 2441610, 6952: 2441724}
[2025-06-04 03:05:20] 2025-06-04 07:05:06,077 | INFO     | --------------------------------------------------
[2025-06-04 03:05:20] 2025-06-04 07:05:06,077 | INFO     | 
[2025-06-04 03:05:20] 2025-06-04 07:05:06,077 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 03:05:20] 2025-06-04 07:05:06,103 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,104 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,104 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,104 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,104 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,104 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,105 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,105 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,105 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,105 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,105 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,106 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,106 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,106 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,107 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 03:05:20] 2025-06-04 07:05:06,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,107 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 03:05:20] 2025-06-04 07:05:06,107 | INFO     | job 6678285997 has completed (purged errors)
[2025-06-04 03:05:20] 2025-06-04 07:05:06,108 | INFO     | overall cleanup function is called
[2025-06-04 03:05:20] 2025-06-04 07:05:07,116 | INFO     | --- collectZombieJob: --- 10, [1130]
[2025-06-04 03:05:20] 2025-06-04 07:05:07,117 | INFO     | zombie collector waiting for pid 1130
[2025-06-04 03:05:20] 2025-06-04 07:05:07,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 03:05:20] 2025-06-04 07:05:07,117 | INFO     | collected zombie processes
[2025-06-04 03:05:20] 2025-06-04 07:05:07,117 | INFO     | will attempt to kill all subprocesses of pid=1130
[2025-06-04 03:05:20] 2025-06-04 07:05:07,214 | INFO     | process IDs to be killed: [1130] (in reverse order)
[2025-06-04 03:05:20] 2025-06-04 07:05:07,271 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 03:05:20] 2025-06-04 07:05:07,272 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 03:05:20] 2025-06-04 07:05:07,277 | INFO     | did not find any defunct processes belonging to 1130
[2025-06-04 03:05:20] 2025-06-04 07:05:07,282 | INFO     | did not find any defunct processes belonging to 1130
[2025-06-04 03:05:20] 2025-06-04 07:05:07,282 | INFO     | ready for new job
[2025-06-04 03:05:20] 2025-06-04 07:05:07,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 03:05:20] 2025-06-04 07:05:07,285 | INFO     | **************************************
[2025-06-04 03:05:20] 2025-06-04 07:05:07,285 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 03:05:20] 2025-06-04 07:05:07,285 | INFO     | **************************************
[2025-06-04 03:05:20] 2025-06-04 07:05:07,285 | INFO     | 
[2025-06-04 03:05:20] 2025-06-04 07:05:07,286 | INFO     | architecture information:
[2025-06-04 03:05:20] 2025-06-04 07:05:07,286 | INFO     | executing command: cat /etc/os-release
[2025-06-04 03:05:20] 2025-06-04 07:05:07,305 | INFO     | cat /etc/os-release:
[2025-06-04 03:05:20] NAME="CentOS Linux"
[2025-06-04 03:05:20] VERSION="7 (Core)"
[2025-06-04 03:05:20] ID="centos"
[2025-06-04 03:05:20] ID_LIKE="rhel fedora"
[2025-06-04 03:05:20] VERSION_ID="7"
[2025-06-04 03:05:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 03:05:20] ANSI_COLOR="0;31"
[2025-06-04 03:05:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 03:05:20] HOME_URL="https://www.centos.org/"
[2025-06-04 03:05:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 03:05:20] 
[2025-06-04 03:05:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 03:05:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 03:05:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 03:05:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 03:05:20] 
[2025-06-04 03:05:20] 2025-06-04 07:05:07,306 | INFO     | **************************************
[2025-06-04 03:05:20] 2025-06-04 07:05:07,809 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 03:05:20] 2025-06-04 07:05:07,827 | INFO     | sufficient remaining disk space (18638438400 B)
[2025-06-04 03:05:20] 2025-06-04 07:05:07,828 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 03:05:20] 2025-06-04 07:05:07,828 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 03:05:20] 2025-06-04 07:05:07,828 | INFO     | update_server=False
[2025-06-04 03:05:20] 2025-06-04 07:05:07,828 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 03:05:20] 2025-06-04 07:05:07,829 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:05:20] 2025-06-04 07:05:07,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 03:05:20] 2025-06-04 07:05:07,829 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 03:05:20] 2025-06-04 07:05:07,830 | INFO     | aborting loop
[2025-06-04 03:05:20] 2025-06-04 07:05:07,831 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 03:05:20] 2025-06-04 07:05:07,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 03:05:20] 2025-06-04 07:05:07,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 03:05:20] 2025-06-04 07:05:08,227 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 03:05:20] 2025-06-04 07:05:08,351 | INFO     | all data control threads have been joined
[2025-06-04 03:05:20] 2025-06-04 07:05:08,463 | INFO     | all payload control threads have been joined
[2025-06-04 03:05:20] 2025-06-04 07:05:08,834 | INFO     | [job] retrieve thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:08,835 | INFO     | [job] queue monitor thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:08,837 | INFO     | [job] job monitor thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:08,935 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:09,023 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:09,113 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:09,357 | INFO     | [data] control thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:09,468 | INFO     | [payload] control thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:09,492 | INFO     | all job control threads have been joined
[2025-06-04 03:05:20] 2025-06-04 07:05:09,645 | INFO     | [data] copytool_in thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:09,748 | INFO     | [payload] validate_post thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:09,865 | INFO     | [job] validate thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:09,914 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:10,000 | INFO     | [payload] failed_post thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:10,233 | INFO     | [data] copytool_out thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:10,497 | INFO     | [job] control thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:10,817 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 03:05:20] 2025-06-04 07:05:14,823 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 03:05:20] 2025-06-04 07:05:15,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140140700129088)>', '<ExcThread(monitor, started 140140236216064)>']
[2025-06-04 03:05:20] 2025-06-04 07:05:15,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 03:05:20] 2025-06-04 07:05:15,862 | INFO     | [monitor] control thread has ended
[2025-06-04 03:05:20] 2025-06-04 07:05:20,452 | INFO     | all workflow threads have been joined
[2025-06-04 03:05:20] 2025-06-04 07:05:20,452 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 03:05:20] 2025-06-04 07:05:20,453 | INFO     | traces error code: 0
[2025-06-04 03:05:20] 2025-06-04 07:05:20,453 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 03:05:20] 2025-06-04 07:05:20,557 [wrapper] ==== pilot stdout END ====
[2025-06-04 03:05:20] 2025-06-04 07:05:20,562 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 03:05:20] 2025-06-04 07:05:20,566 [wrapper] pilotpid: 27056
[2025-06-04 03:05:20] 2025-06-04 07:05:20,570 [wrapper] Pilot exit status: 0
[2025-06-04 03:05:20] 2025-06-04 07:05:20,586 [wrapper] pandaids: 6678285997
[2025-06-04 03:05:20] 2025-06-04 07:05:20,625 [wrapper] cleanup supervisor_pilot  3695 27057
[2025-06-04 03:05:20] 2025-06-04 07:05:20,629 [wrapper] Test setup, not cleaning
[2025-06-04 03:05:20] 2025-06-04 07:05:20,634 [wrapper] apfmon messages muted
[2025-06-04 03:05:20] 2025-06-04 07:05:20,638 [wrapper] ==== wrapper stdout END ====
[2025-06-04 03:05:20] 2025-06-04 07:05:20,642 [wrapper] ==== wrapper stderr END ====
[2025-06-04 03:05:20]  *** Error codes and diagnostics ***
[2025-06-04 03:05:20]     "exeErrorCode": 0,
[2025-06-04 03:05:20]     "exeErrorDiag": "",
[2025-06-04 03:05:20]     "pilotErrorCode": 0,
[2025-06-04 03:05:20]     "pilotErrorDiag": "",
[2025-06-04 03:05:20]  *** Listing of results directory ***
[2025-06-04 03:05:20] total 396256
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 03:05:20] -rwx------ 1 boincer umatlas     37140 Jun  3 23:06 runpilot2-wrapper.sh
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 23:06 queuedata.json
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas       100 Jun  4 01:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 03:05:20] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 01:08 run_atlas
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas       105 Jun  4 01:08 job.xml
[2025-06-04 03:05:20] -rw-r--r-- 2 boincer umatlas 215348893 Jun  4 01:08 EVNT.45006593._002047.pool.root.1
[2025-06-04 03:05:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:08 start_atlas.sh
[2025-06-04 03:05:20] drwxrwx--x 2 boincer umatlas      4096 Jun  4 01:08 shared
[2025-06-04 03:05:20] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 01:08 input.tar.gz
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas         0 Jun  4 01:08 boinc_lockfile
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 01:08 pandaJob.out
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas    986745 Jun  4 01:08 agis_schedconf.cvmfs.json
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas   1603667 Jun  4 01:08 agis_ddmendpoints.agis.ALL.json
[2025-06-04 03:05:20] drwx------ 4 boincer umatlas      4096 Jun  4 01:08 pilot3
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas 184654295 Jun  4 03:04 HITS.45006595._051091.pool.root.1
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas        95 Jun  4 03:04 pilot_heartbeat.json
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 03:04 init_data.xml
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas       530 Jun  4 03:04 boinc_task_state.xml
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas      1062 Jun  4 03:04 memory_monitor_summary.json
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas    324519 Jun  4 03:04 log.45006595._051091.job.log.tgz.1
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas      7747 Jun  4 03:05 heartbeat.json
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas        27 Jun  4 03:05 wrapper_checkpoint.txt
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 03:05 boinc_mmap_file
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas      4476 Jun  4 03:05 pilotlog.txt
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas    639227 Jun  4 03:05 log.45006595._051091.job.log.1
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas       357 Jun  4 03:05 output.list
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas       620 Jun  4 03:05 runtime_log
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas    983040 Jun  4 03:05 result.tar.gz
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 03:05 runtime_log.err
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas       658 Jun  4 03:05 AGlMDmLdtg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmR0mKDm9BRxLn.diag
[2025-06-04 03:05:20] -rw-r--r-- 1 boincer umatlas     20809 Jun  4 03:05 stderr.txt
[2025-06-04 03:05:20] HITS file was successfully produced:
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas 184654295 Jun  4 03:04 shared/HITS.pool.root.1
[2025-06-04 03:05:20]  *** Contents of shared directory: ***
[2025-06-04 03:05:20] total 392112
[2025-06-04 03:05:20] -rw-r--r-- 2 boincer umatlas 215348893 Jun  4 01:08 ATLAS.root_0
[2025-06-04 03:05:20] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:08 start_atlas.sh
[2025-06-04 03:05:20] -rw-r--r-- 2 boincer umatlas    508877 Jun  4 01:08 input.tar.gz
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas 184654295 Jun  4 03:04 HITS.pool.root.1
[2025-06-04 03:05:20] -rw------- 1 boincer umatlas    983040 Jun  4 03:05 result.tar.gz
03:05:22 (23460): run_atlas exited; CPU time 51151.913533
03:05:22 (23460): called boinc_finish(0)

</stderr_txt>
]]>

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