Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
12:07:29 (290909): wrapper (7.7.26015): starting
12:07:29 (290909): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 12:07:29] Arguments: --nthreads 12
[2025-06-04 12:07:29] Threads: 12
[2025-06-04 12:07:29] Checking for CVMFS
[2025-06-04 12:07:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 12:07:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 12:07:29] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 12:07:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 12:07:29] 2.13.0.0 3386825 2762 48652 146788 3 56 3516293 6144001 0 130560 0 1380151 99.993 360819 2732 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 12:07:29] CVMFS is ok
[2025-06-04 12:07:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:07:29] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 12:07:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 12:07:29] Further information can be found at the LHC@home message board.
[2025-06-04 12:07:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:07:29] Checking for apptainer binary...
[2025-06-04 12:07:29] apptainer is not installed, using version from CVMFS
[2025-06-04 12:07:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:07:29] ace
[2025-06-04 12:07:29] apptainer works
[2025-06-04 12:07:29] Set ATHENA_PROC_NUMBER=12
[2025-06-04 12:07:29] Set ATHENA_CORE_NUMBER=12
[2025-06-04 12:07:29] Starting ATLAS job with PandaID=6678213906
[2025-06-04 12:07:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 13:11:13]  *** The last 200 lines of the pilot log: ***
[2025-06-04 13:11:13]  filesize=362531
[2025-06-04 13:11:13]  filetype=log
[2025-06-04 13:11:13]  guid=19550977-d2be-4e20-94ac-4ace4b8af556
[2025-06-04 13:11:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 13:11:13]  is_altstaged=None
[2025-06-04 13:11:13]  is_tar=False
[2025-06-04 13:11:13]  lfn=log.45006595._048746.job.log.tgz.1
[2025-06-04 13:11:13]  mtime=0
[2025-06-04 13:11:13]  protocol_id=None
[2025-06-04 13:11:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 13:11:13]  replicas=None
[2025-06-04 13:11:13]  scope=mc23_13p6TeV
[2025-06-04 13:11:13]  status=None
[2025-06-04 13:11:13]  status_code=0
[2025-06-04 13:11:13]  storage_token=
[2025-06-04 13:11:13]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6678213906/log.45006595._048746.job.log.tgz.1
[2025-06-04 13:11:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/5c/log.45006595._048746.job.log.tgz.1
[2025-06-04 13:11:13]  workdir=None
[2025-06-04 13:11:13] ]
[2025-06-04 13:11:13] 2025-06-04 18:10:55,657 | INFO     | transferring file log.45006595._048746.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6678213906/log.45006595._048746.job.log.tgz.1 to /var/lib/boinc
[2025-06-04 13:11:13] 2025-06-04 18:10:55,657 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6678213906/log.45006595._048746.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.450065
[2025-06-04 13:11:13] 2025-06-04 18:10:55,676 | INFO     | adding to output.list: log.45006595._048746.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/5c/log.45006595._048746.job.log.tg
[2025-06-04 13:11:13] 2025-06-04 18:10:55,676 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 13:11:13] 2025-06-04 18:10:55,676 | INFO     | summary of transferred files:
[2025-06-04 13:11:13] 2025-06-04 18:10:55,676 | INFO     |  -- lfn=log.45006595._048746.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 13:11:13] 2025-06-04 18:10:55,676 | INFO     | stage-out finished correctly
[2025-06-04 13:11:13] 2025-06-04 18:10:56,665 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 13:11:13] 2025-06-04 18:10:56,774 | INFO     | monitor loop #284: job 0:6678213906 is in state 'finished'
[2025-06-04 13:11:13] 2025-06-04 18:10:56,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:11:13] 2025-06-04 18:10:57,843 | INFO     | job 6678213906 has state=finished
[2025-06-04 13:11:13] 2025-06-04 18:10:57,843 | INFO     | preparing for final server update for job 6678213906 in state='finished'
[2025-06-04 13:11:13] 2025-06-04 18:10:57,843 | INFO     | this job has now completed (state=finished)
[2025-06-04 13:11:13] 2025-06-04 18:10:57,843 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 13:11:13] 2025-06-04 18:10:57,843 | INFO     | log transfer has been attempted: DONE
[2025-06-04 13:11:13] 2025-06-04 18:10:57,843 | INFO     | job 6678213906 has finished - writing final server update
[2025-06-04 13:11:13] 2025-06-04 18:10:57,844 | INFO     | total number of processed events: 400 (read)
[2025-06-04 13:11:13] 2025-06-04 18:10:57,845 | INFO     | executing command: lscpu
[2025-06-04 13:11:13] 2025-06-04 18:10:57,865 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 13:11:13] 2025-06-04 18:10:59,277 | INFO     | monitor loop #285: job 0:6678213906 is in state 'finished'
[2025-06-04 13:11:13] 2025-06-04 18:10:59,277 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 13:11:13] 2025-06-04 18:11:00,530 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 13:11:13] 2025-06-04 18:11:00,530 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6678213906/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 13:11:13] 2025-06-04 18:11:00,530 | INFO     | extracted standard info from prmon json
[2025-06-04 13:11:13] 2025-06-04 18:11:00,531 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 13:11:13] 2025-06-04 18:11:00,531 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 13:11:13] 2025-06-04 18:11:00,531 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 13:11:13] 2025-06-04 18:11:00,531 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 13:11:13] 2025-06-04 18:11:00,532 | INFO     | fitting pss+swap vs Time
[2025-06-04 13:11:13] 2025-06-04 18:11:00,532 | INFO     | sum of square deviations: 51573060.0
[2025-06-04 13:11:13] 2025-06-04 18:11:00,532 | INFO     | sum of deviations: -3319741329.0
[2025-06-04 13:11:13] 2025-06-04 18:11:00,532 | INFO     | mean x: 1749058832.0
[2025-06-04 13:11:13] 2025-06-04 18:11:00,532 | INFO     | mean y: 2769366.8545454545
[2025-06-04 13:11:13] 2025-06-04 18:11:00,532 | INFO     | -- intersect: 112589125333.37791
[2025-06-04 13:11:13] 2025-06-04 18:11:00,532 | INFO     | intersect: 112589125333.37791
[2025-06-04 13:11:13] 2025-06-04 18:11:00,532 | INFO     | chi2: 0.0771460551421542
[2025-06-04 13:11:13] 2025-06-04 18:11:00,532 | INFO     | -- intersect: 112589125333.37791
[2025-06-04 13:11:13] 2025-06-04 18:11:00,532 | INFO     | current memory leak: -64.37 B/s (using 55 data points, chi2=0.08)
[2025-06-04 13:11:13] 2025-06-04 18:11:00,533 | INFO     | ..............................
[2025-06-04 13:11:13] 2025-06-04 18:11:00,533 | INFO     | . Timing measurements:
[2025-06-04 13:11:13] 2025-06-04 18:11:00,533 | INFO     | . get job = 0 s
[2025-06-04 13:11:13] 2025-06-04 18:11:00,533 | INFO     | . initial setup = 3 s
[2025-06-04 13:11:13] 2025-06-04 18:11:00,533 | INFO     | . payload setup = 4 s
[2025-06-04 13:11:13] 2025-06-04 18:11:00,533 | INFO     | . stage-in = 0 s
[2025-06-04 13:11:13] 2025-06-04 18:11:00,533 | INFO     | . payload execution = 3774 s
[2025-06-04 13:11:13] 2025-06-04 18:11:00,533 | INFO     | . stage-out = 0 s
[2025-06-04 13:11:13] 2025-06-04 18:11:00,533 | INFO     | . log creation = 0 s
[2025-06-04 13:11:13] 2025-06-04 18:11:00,533 | INFO     | ..............................
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | 
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | job summary report
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | --------------------------------------------------
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | PanDA job id: 6678213906
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | task id: 45006595
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | errors: (none)
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | pilot state: finished 
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | transexitcode: 0
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | exeerrorcode: 0
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | exeerrordiag: 
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | exitcode: 0
[2025-06-04 13:11:13] 2025-06-04 18:11:00,578 | INFO     | exitmsg: OK
[2025-06-04 13:11:13] 2025-06-04 18:11:00,579 | INFO     | cpuconsumptiontime: 41078 s
[2025-06-04 13:11:13] 2025-06-04 18:11:00,579 | INFO     | nevents: 400
[2025-06-04 13:11:13] 2025-06-04 18:11:00,579 | INFO     | neventsw: 0
[2025-06-04 13:11:13] 2025-06-04 18:11:00,579 | INFO     | pid: 301108
[2025-06-04 13:11:13] 2025-06-04 18:11:00,579 | INFO     | pgrp: 301108
[2025-06-04 13:11:13] 2025-06-04 18:11:00,579 | INFO     | corecount: 12
[2025-06-04 13:11:13] 2025-06-04 18:11:00,579 | INFO     | event service: False
[2025-06-04 13:11:13] 2025-06-04 18:11:00,579 | INFO     | sizes: {0: 2397349, 3: 2397555, 11: 2397583, 3781: 2423367, 3783: 2432322, 3784: 2432378, 3787: 2432676}
[2025-06-04 13:11:13] 2025-06-04 18:11:00,579 | INFO     | --------------------------------------------------
[2025-06-04 13:11:13] 2025-06-04 18:11:00,579 | INFO     | 
[2025-06-04 13:11:13] 2025-06-04 18:11:00,579 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,595 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,596 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,596 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,596 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,596 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,596 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 13:11:13] 2025-06-04 18:11:00,596 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,596 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 13:11:13] 2025-06-04 18:11:00,596 | INFO     | job 6678213906 has completed (purged errors)
[2025-06-04 13:11:13] 2025-06-04 18:11:00,596 | INFO     | overall cleanup function is called
[2025-06-04 13:11:13] 2025-06-04 18:11:01,601 | INFO     | --- collectZombieJob: --- 10, [301108]
[2025-06-04 13:11:13] 2025-06-04 18:11:01,601 | INFO     | zombie collector waiting for pid 301108
[2025-06-04 13:11:13] 2025-06-04 18:11:01,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 13:11:13] 2025-06-04 18:11:01,601 | INFO     | collected zombie processes
[2025-06-04 13:11:13] 2025-06-04 18:11:01,601 | INFO     | will attempt to kill all subprocesses of pid=301108
[2025-06-04 13:11:13] 2025-06-04 18:11:01,668 | INFO     | process IDs to be killed: [301108] (in reverse order)
[2025-06-04 13:11:13] 2025-06-04 18:11:01,717 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 13:11:13] 2025-06-04 18:11:01,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 13:11:13] 2025-06-04 18:11:01,719 | INFO     | did not find any defunct processes belonging to 301108
[2025-06-04 13:11:13] 2025-06-04 18:11:01,721 | INFO     | did not find any defunct processes belonging to 301108
[2025-06-04 13:11:13] 2025-06-04 18:11:01,721 | INFO     | ready for new job
[2025-06-04 13:11:13] 2025-06-04 18:11:01,721 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 13:11:13] 2025-06-04 18:11:01,722 | INFO     | **************************************
[2025-06-04 13:11:13] 2025-06-04 18:11:01,722 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 13:11:13] 2025-06-04 18:11:01,722 | INFO     | **************************************
[2025-06-04 13:11:13] 2025-06-04 18:11:01,722 | INFO     | 
[2025-06-04 13:11:13] 2025-06-04 18:11:01,723 | INFO     | architecture information:
[2025-06-04 13:11:13] 2025-06-04 18:11:01,723 | INFO     | executing command: cat /etc/os-release
[2025-06-04 13:11:13] 2025-06-04 18:11:01,732 | INFO     | cat /etc/os-release:
[2025-06-04 13:11:13] NAME="CentOS Linux"
[2025-06-04 13:11:13] VERSION="7 (Core)"
[2025-06-04 13:11:13] ID="centos"
[2025-06-04 13:11:13] ID_LIKE="rhel fedora"
[2025-06-04 13:11:13] VERSION_ID="7"
[2025-06-04 13:11:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 13:11:13] ANSI_COLOR="0;31"
[2025-06-04 13:11:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 13:11:13] HOME_URL="https://www.centos.org/"
[2025-06-04 13:11:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 13:11:13] 
[2025-06-04 13:11:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 13:11:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 13:11:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 13:11:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 13:11:13] 
[2025-06-04 13:11:13] 2025-06-04 18:11:01,732 | INFO     | **************************************
[2025-06-04 13:11:13] 2025-06-04 18:11:02,233 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-06-04 13:11:13] 2025-06-04 18:11:02,246 | INFO     | sufficient remaining disk space (23686283264 B)
[2025-06-04 13:11:13] 2025-06-04 18:11:02,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 13:11:13] 2025-06-04 18:11:02,247 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 13:11:13] 2025-06-04 18:11:02,247 | INFO     | update_server=False
[2025-06-04 13:11:13] 2025-06-04 18:11:02,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 13:11:13] 2025-06-04 18:11:02,247 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 13:11:13] 2025-06-04 18:11:02,247 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 13:11:13] 2025-06-04 18:11:02,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 13:11:13] 2025-06-04 18:11:02,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 13:11:13] 2025-06-04 18:11:02,248 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:11:13] 2025-06-04 18:11:02,722 | INFO     | all data control threads have been joined
[2025-06-04 13:11:13] 2025-06-04 18:11:02,725 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 13:11:13] 2025-06-04 18:11:02,785 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 13:11:13] 2025-06-04 18:11:02,785 | INFO     | aborting loop
[2025-06-04 13:11:13] 2025-06-04 18:11:03,033 | INFO     | all payload control threads have been joined
[2025-06-04 13:11:13] 2025-06-04 18:11:03,249 | INFO     | [job] retrieve thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:03,253 | INFO     | [job] queue monitor thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:03,542 | INFO     | [payload] validate_post thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:03,726 | INFO     | [data] control thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:03,729 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 13:11:13] 2025-06-04 18:11:03,790 | INFO     | [job] job monitor thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:03,800 | INFO     | all job control threads have been joined
[2025-06-04 13:11:13] 2025-06-04 18:11:03,909 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:04,010 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:04,037 | INFO     | [payload] control thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:04,121 | INFO     | [payload] failed_post thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:04,294 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:04,505 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:04,670 | INFO     | [job] validate thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:04,735 | INFO     | [data] copytool_in thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:04,805 | INFO     | [job] control thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:05,734 | INFO     | [data] copytool_out thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:06,730 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 13:11:13] 2025-06-04 18:11:08,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140451499235136)>', '<ExcThread(monitor, started 140450505672448)>']
[2025-06-04 13:11:13] 2025-06-04 18:11:08,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 13:11:13] 2025-06-04 18:11:08,273 | INFO     | [monitor] control thread has ended
[2025-06-04 13:11:13] 2025-06-04 18:11:13,085 | INFO     | all workflow threads have been joined
[2025-06-04 13:11:13] 2025-06-04 18:11:13,086 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 13:11:13] 2025-06-04 18:11:13,086 | INFO     | traces error code: 0
[2025-06-04 13:11:13] 2025-06-04 18:11:13,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 13:11:13] 2025-06-04 18:11:13,174 [wrapper] ==== pilot stdout END ====
[2025-06-04 13:11:13] 2025-06-04 18:11:13,176 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 13:11:13] 2025-06-04 18:11:13,177 [wrapper] pilotpid: 294601
[2025-06-04 13:11:13] 2025-06-04 18:11:13,179 [wrapper] Pilot exit status: 0
[2025-06-04 13:11:13] 2025-06-04 18:11:13,186 [wrapper] pandaids: 6678213906
[2025-06-04 13:11:13] 2025-06-04 18:11:13,206 [wrapper] cleanup supervisor_pilot  312202 294602
[2025-06-04 13:11:13] 2025-06-04 18:11:13,208 [wrapper] Test setup, not cleaning
[2025-06-04 13:11:13] 2025-06-04 18:11:13,210 [wrapper] apfmon messages muted
[2025-06-04 13:11:13] 2025-06-04 18:11:13,213 [wrapper] ==== wrapper stdout END ====
[2025-06-04 13:11:13] 2025-06-04 18:11:13,215 [wrapper] ==== wrapper stderr END ====
[2025-06-04 13:11:13]  *** Error codes and diagnostics ***
[2025-06-04 13:11:13]     "exeErrorCode": 0,
[2025-06-04 13:11:13]     "exeErrorDiag": "",
[2025-06-04 13:11:13]     "pilotErrorCode": 0,
[2025-06-04 13:11:13]     "pilotErrorDiag": "",
[2025-06-04 13:11:13]  *** Listing of results directory ***
[2025-06-04 13:11:13] total 388444
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc    495897 Jun  3 18:58 pilot3.tar.gz
[2025-06-04 13:11:13] -rwx------ 1 boinc boinc     37140 Jun  3 19:20 runpilot2-wrapper.sh
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc      5111 Jun  3 19:20 queuedata.json
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 13:11:13] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:07 run_atlas
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:07 job.xml
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc      6748 Jun  4 12:07 init_data.xml
[2025-06-04 13:11:13] -rw-r--r-- 2 boinc boinc 213828592 Jun  4 12:07 EVNT.45006593._001955.pool.root.1
[2025-06-04 13:11:13] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:07 start_atlas.sh
[2025-06-04 13:11:13] drwxrwx--x 2 boinc boinc      4096 Jun  4 12:07 shared
[2025-06-04 13:11:13] -rw-r--r-- 2 boinc boinc    508877 Jun  4 12:07 input.tar.gz
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:07 boinc_lockfile
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc      2525 Jun  4 12:07 pandaJob.out
[2025-06-04 13:11:13] -rw------- 1 boinc boinc    990984 Jun  4 12:07 agis_schedconf.cvmfs.json
[2025-06-04 13:11:13] -rw------- 1 boinc boinc   1598969 Jun  4 12:07 agis_ddmendpoints.agis.ALL.json
[2025-06-04 13:11:13] drwx------ 4 boinc boinc      4096 Jun  4 12:07 pilot3
[2025-06-04 13:11:13] -rw------- 1 boinc boinc        95 Jun  4 13:10 pilot_heartbeat.json
[2025-06-04 13:11:13] -rw------- 1 boinc boinc 178618800 Jun  4 13:10 HITS.45006595._048746.pool.root.1
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc       529 Jun  4 13:10 boinc_task_state.xml
[2025-06-04 13:11:13] -rw------- 1 boinc boinc      1040 Jun  4 13:10 memory_monitor_summary.json
[2025-06-04 13:11:13] -rw------- 1 boinc boinc    362531 Jun  4 13:10 log.45006595._048746.job.log.tgz.1
[2025-06-04 13:11:13] -rw------- 1 boinc boinc      7665 Jun  4 13:11 heartbeat.json
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc      8192 Jun  4 13:11 boinc_mmap_file
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc        27 Jun  4 13:11 wrapper_checkpoint.txt
[2025-06-04 13:11:13] -rw------- 1 boinc boinc      4483 Jun  4 13:11 pilotlog.txt
[2025-06-04 13:11:13] -rw------- 1 boinc boinc    378192 Jun  4 13:11 log.45006595._048746.job.log.1
[2025-06-04 13:11:13] -rw------- 1 boinc boinc       357 Jun  4 13:11 output.list
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc       620 Jun  4 13:11 runtime_log
[2025-06-04 13:11:13] -rw------- 1 boinc boinc    757760 Jun  4 13:11 result.tar.gz
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc      8696 Jun  4 13:11 runtime_log.err
[2025-06-04 13:11:13] -rw------- 1 boinc boinc       641 Jun  4 13:11 0rOODmg2qg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmUbmKDmD6iGKn.diag
[2025-06-04 13:11:13] -rw-r--r-- 1 boinc boinc     21236 Jun  4 13:11 stderr.txt
[2025-06-04 13:11:13] HITS file was successfully produced:
[2025-06-04 13:11:13] -rw------- 1 boinc boinc 178618800 Jun  4 13:10 shared/HITS.pool.root.1
[2025-06-04 13:11:13]  *** Contents of shared directory: ***
[2025-06-04 13:11:13] total 384520
[2025-06-04 13:11:13] -rw-r--r-- 2 boinc boinc 213828592 Jun  4 12:07 ATLAS.root_0
[2025-06-04 13:11:13] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:07 start_atlas.sh
[2025-06-04 13:11:13] -rw-r--r-- 2 boinc boinc    508877 Jun  4 12:07 input.tar.gz
[2025-06-04 13:11:13] -rw------- 1 boinc boinc 178618800 Jun  4 13:10 HITS.pool.root.1
[2025-06-04 13:11:13] -rw------- 1 boinc boinc    757760 Jun  4 13:11 result.tar.gz
13:11:14 (290909): run_atlas exited; CPU time 41121.744983
13:11:14 (290909): called boinc_finish(0)

</stderr_txt>
]]>

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