Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:10:26 (30202): wrapper (7.7.26015): starting
15:10:26 (30202): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 15:10:26] Arguments: --nthreads 8
[2025-06-04 15:10:26] Threads: 8
[2025-06-04 15:10:26] Checking for CVMFS
[2025-06-04 15:10:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:10:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:10:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:10:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:10:27] 2.11.2.0 3740 33396 97668 146780 3 59 20221794 25165824 3522 130560 0 18269587 99.815 19112745 2210 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 15:10:27] CVMFS is ok
[2025-06-04 15:10:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:10:27] Checking for apptainer binary...
[2025-06-04 15:10:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:10:27] Running /usr/bin/apptainer --version
[2025-06-04 15:10:27] apptainer version 1.3.2-1.el7
[2025-06-04 15:10:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:41:04] cg-vwn234.simple-grid.lan
[2025-06-04 15:41:04] apptainer works
[2025-06-04 15:41:04] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:41:04] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:41:04] Starting ATLAS job with PandaID=6678074764
[2025-06-04 15:41:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:47:20]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:47:21] 2025-06-04 17:46:34,487 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6678074764/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 19:47:21] 2025-06-04 17:46:34,487 | INFO     | extracted standard info from prmon json
[2025-06-04 19:47:21] 2025-06-04 17:46:34,488 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 19:47:21] 2025-06-04 17:46:34,488 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:47:21] 2025-06-04 17:46:34,488 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:47:21] 2025-06-04 17:46:34,488 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:47:21] 2025-06-04 17:46:34,494 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:47:21] 2025-06-04 17:46:34,494 | INFO     | sum of square deviations: 3723716330.0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,496 | INFO     | sum of deviations: 56988258567.000015
[2025-06-04 19:47:21] 2025-06-04 17:46:34,497 | INFO     | mean x: 1749052133.0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,497 | INFO     | mean y: 2430162.4323144103
[2025-06-04 19:47:21] 2025-06-04 17:46:34,497 | INFO     | -- intersect: -26765300343.657795
[2025-06-04 19:47:21] 2025-06-04 17:46:34,497 | INFO     | intersect: -26765300343.657795
[2025-06-04 19:47:21] 2025-06-04 17:46:34,498 | INFO     | chi2: 7.7588782953240605
[2025-06-04 19:47:21] 2025-06-04 17:46:34,498 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,500 | INFO     | sum of deviations: 86516823136.00002
[2025-06-04 19:47:21] 2025-06-04 17:46:34,500 | INFO     | mean x: 1749051980.5
[2025-06-04 19:47:21] 2025-06-04 17:46:34,500 | INFO     | mean y: 2448773.3660714286
[2025-06-04 19:47:21] 2025-06-04 17:46:34,506 | INFO     | -- intersect: -43417515026.862434
[2025-06-04 19:47:21] 2025-06-04 17:46:34,506 | INFO     | intersect: -43417515026.862434
[2025-06-04 19:47:21] 2025-06-04 17:46:34,507 | INFO     | chi2: 6.23360972045018
[2025-06-04 19:47:21] 2025-06-04 17:46:34,507 | INFO     | current chi2=6.23360972045018 (change=19.658364480250885 %)
[2025-06-04 19:47:21] 2025-06-04 17:46:34,507 | INFO     | right removable region: 223
[2025-06-04 19:47:21] 2025-06-04 17:46:34,507 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,509 | INFO     | sum of deviations: -19502679629.5
[2025-06-04 19:47:21] 2025-06-04 17:46:34,510 | INFO     | mean x: 1749052285.5
[2025-06-04 19:47:21] 2025-06-04 17:46:34,510 | INFO     | mean y: 2478996.8348214286
[2025-06-04 19:47:21] 2025-06-04 17:46:34,510 | INFO     | -- intersect: 9790237729.669123
[2025-06-04 19:47:21] 2025-06-04 17:46:34,510 | INFO     | intersect: 9790237729.669123
[2025-06-04 19:47:21] 2025-06-04 17:46:34,510 | INFO     | chi2: 3.2369125997295978
[2025-06-04 19:47:21] 2025-06-04 17:46:34,511 | INFO     | current chi2=3.2369125997295978 (change=58.28117832856916 %)
[2025-06-04 19:47:21] 2025-06-04 17:46:34,511 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,513 | INFO     | sum of deviations: -57773926611.0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,513 | INFO     | mean x: 1749052438.0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,513 | INFO     | mean y: 2504407.506849315
[2025-06-04 19:47:21] 2025-06-04 17:46:34,513 | INFO     | -- intersect: 31029019793.56735
[2025-06-04 19:47:21] 2025-06-04 17:46:34,514 | INFO     | intersect: 31029019793.56735
[2025-06-04 19:47:21] 2025-06-04 17:46:34,514 | INFO     | chi2: 1.8692523865017425
[2025-06-04 19:47:21] 2025-06-04 17:46:34,514 | INFO     | current chi2=1.8692523865017425 (change=42.25199695976053 %)
[2025-06-04 19:47:21] 2025-06-04 17:46:34,515 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 19:47:21] 2025-06-04 17:46:34,516 | INFO     | sum of deviations: -61126509577.5
[2025-06-04 19:47:21] 2025-06-04 17:46:34,517 | INFO     | mean x: 1749052590.5
[2025-06-04 19:47:21] 2025-06-04 17:46:34,517 | INFO     | mean y: 2506745.0607476635
[2025-06-04 19:47:21] 2025-06-04 17:46:34,517 | INFO     | -- intersect: 35184642895.708015
[2025-06-04 19:47:21] 2025-06-04 17:46:34,517 | INFO     | intersect: 35184642895.708015
[2025-06-04 19:47:21] 2025-06-04 17:46:34,524 | INFO     | chi2: 1.843513880772377
[2025-06-04 19:47:21] 2025-06-04 17:46:34,530 | INFO     | current chi2=1.843513880772377 (change=1.3769411725901006 %)
[2025-06-04 19:47:21] 2025-06-04 17:46:34,530 | INFO     | left removable region: 30
[2025-06-04 19:47:21] 2025-06-04 17:46:34,531 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,532 | INFO     | sum of deviations: -13365084628.0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,532 | INFO     | mean x: 1749052865.0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,533 | INFO     | mean y: 2514216.1450777203
[2025-06-04 19:47:21] 2025-06-04 17:46:34,533 | INFO     | -- intersect: 10489144520.200542
[2025-06-04 19:47:21] 2025-06-04 17:46:34,533 | INFO     | intersect: 10489144520.200542
[2025-06-04 19:47:21] 2025-06-04 17:46:34,533 | INFO     | chi2: 0.1027865929910099
[2025-06-04 19:47:21] 2025-06-04 17:46:34,533 | INFO     | -- intersect: 10489144520.200542
[2025-06-04 19:47:21] 2025-06-04 17:46:34,534 | INFO     | current memory leak: -6.00 B/s (using 193 data points, chi2=0.10)
[2025-06-04 19:47:21] 2025-06-04 17:46:34,535 | INFO     | ..............................
[2025-06-04 19:47:21] 2025-06-04 17:46:34,535 | INFO     | . Timing measurements:
[2025-06-04 19:47:21] 2025-06-04 17:46:34,535 | INFO     | . get job = 0 s
[2025-06-04 19:47:21] 2025-06-04 17:46:34,535 | INFO     | . initial setup = 8 s
[2025-06-04 19:47:21] 2025-06-04 17:46:34,535 | INFO     | . payload setup = 178 s
[2025-06-04 19:47:21] 2025-06-04 17:46:34,535 | INFO     | . stage-in = 0 s
[2025-06-04 19:47:21] 2025-06-04 17:46:34,535 | INFO     | . payload execution = 14058 s
[2025-06-04 19:47:21] 2025-06-04 17:46:34,535 | INFO     | . stage-out = 6 s
[2025-06-04 19:47:21] 2025-06-04 17:46:34,535 | INFO     | . log creation = 1 s
[2025-06-04 19:47:21] 2025-06-04 17:46:34,535 | INFO     | ..............................
[2025-06-04 19:47:21] 2025-06-04 17:46:34,777 | INFO     | 
[2025-06-04 19:47:21] 2025-06-04 17:46:34,777 | INFO     | job summary report
[2025-06-04 19:47:21] 2025-06-04 17:46:34,777 | INFO     | --------------------------------------------------
[2025-06-04 19:47:21] 2025-06-04 17:46:34,777 | INFO     | PanDA job id: 6678074764
[2025-06-04 19:47:21] 2025-06-04 17:46:34,777 | INFO     | task id: 45006595
[2025-06-04 19:47:21] 2025-06-04 17:46:34,778 | INFO     | errors: (none)
[2025-06-04 19:47:21] 2025-06-04 17:46:34,778 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:47:21] 2025-06-04 17:46:34,778 | INFO     | pilot state: finished 
[2025-06-04 19:47:21] 2025-06-04 17:46:34,778 | INFO     | transexitcode: 0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,778 | INFO     | exeerrorcode: 0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,778 | INFO     | exeerrordiag: 
[2025-06-04 19:47:21] 2025-06-04 17:46:34,778 | INFO     | exitcode: 0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,778 | INFO     | exitmsg: OK
[2025-06-04 19:47:21] 2025-06-04 17:46:34,778 | INFO     | cpuconsumptiontime: 51493 s
[2025-06-04 19:47:21] 2025-06-04 17:46:34,778 | INFO     | nevents: 400
[2025-06-04 19:47:21] 2025-06-04 17:46:34,779 | INFO     | neventsw: 0
[2025-06-04 19:47:21] 2025-06-04 17:46:34,779 | INFO     | pid: 26189
[2025-06-04 19:47:21] 2025-06-04 17:46:34,779 | INFO     | pgrp: 26189
[2025-06-04 19:47:21] 2025-06-04 17:46:34,779 | INFO     | corecount: 8
[2025-06-04 19:47:21] 2025-06-04 17:46:34,779 | INFO     | event service: False
[2025-06-04 19:47:21] 2025-06-04 17:46:34,779 | INFO     | sizes: {0: 2397116, 1: 2397371, 12: 2397371, 23: 2397399, 33: 2397427, 44: 2397483, 55: 2397639, 66: 2397667, 76: 2397695, 87: 2397751, 90: 2397985, 98: 2398293, 1
[2025-06-04 19:47:21] 2025-06-04 17:46:34,779 | INFO     | --------------------------------------------------
[2025-06-04 19:47:21] 2025-06-04 17:46:34,779 | INFO     | 
[2025-06-04 19:47:21] 2025-06-04 17:46:34,779 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-06-04 19:47:21] 2025-06-04 17:46:35,068 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,069 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,069 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,069 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,069 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,070 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,070 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,070 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,070 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,070 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,070 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,070 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,071 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,071 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:47:21] 2025-06-04 17:46:35,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:47:21] 2025-06-04 17:46:35,071 | INFO     | job 6678074764 has completed (purged errors)
[2025-06-04 19:47:21] 2025-06-04 17:46:35,071 | INFO     | overall cleanup function is called
[2025-06-04 19:47:21] 2025-06-04 17:46:36,081 | INFO     | --- collectZombieJob: --- 10, [26189]
[2025-06-04 19:47:21] 2025-06-04 17:46:36,081 | INFO     | zombie collector waiting for pid 26189
[2025-06-04 19:47:21] 2025-06-04 17:46:36,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:47:21] 2025-06-04 17:46:36,081 | INFO     | collected zombie processes
[2025-06-04 19:47:21] 2025-06-04 17:46:36,081 | INFO     | will attempt to kill all subprocesses of pid=26189
[2025-06-04 19:47:21] 2025-06-04 17:46:36,224 | INFO     | process IDs to be killed: [26189] (in reverse order)
[2025-06-04 19:47:21] 2025-06-04 17:46:36,973 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:47:21] 2025-06-04 17:46:36,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:47:21] 2025-06-04 17:46:36,977 | INFO     | did not find any defunct processes belonging to 26189
[2025-06-04 19:47:21] 2025-06-04 17:46:36,980 | INFO     | did not find any defunct processes belonging to 26189
[2025-06-04 19:47:21] 2025-06-04 17:46:36,981 | INFO     | ready for new job
[2025-06-04 19:47:21] 2025-06-04 17:46:36,981 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:47:21] 2025-06-04 17:46:36,983 | INFO     | **************************************
[2025-06-04 19:47:21] 2025-06-04 17:46:36,983 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:47:21] 2025-06-04 17:46:36,983 | INFO     | **************************************
[2025-06-04 19:47:21] 2025-06-04 17:46:36,984 | INFO     | 
[2025-06-04 19:47:21] 2025-06-04 17:46:36,984 | INFO     | pilot is running in a VM
[2025-06-04 19:47:21] 2025-06-04 17:46:36,984 | INFO     | architecture information:
[2025-06-04 19:47:21] 2025-06-04 17:46:36,986 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:47:21] 2025-06-04 17:46:37,188 | INFO     | cat /etc/os-release:
[2025-06-04 19:47:21] NAME="CentOS Linux"
[2025-06-04 19:47:21] VERSION="7 (Core)"
[2025-06-04 19:47:21] ID="centos"
[2025-06-04 19:47:21] ID_LIKE="rhel fedora"
[2025-06-04 19:47:21] VERSION_ID="7"
[2025-06-04 19:47:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:47:21] ANSI_COLOR="0;31"
[2025-06-04 19:47:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:47:21] HOME_URL="https://www.centos.org/"
[2025-06-04 19:47:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:47:21] 
[2025-06-04 19:47:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:47:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:47:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:47:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:47:21] 
[2025-06-04 19:47:21] 2025-06-04 17:46:37,189 | INFO     | **************************************
[2025-06-04 19:47:21] 2025-06-04 17:46:37,693 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-06-04 19:47:21] 2025-06-04 17:46:37,864 | INFO     | sufficient remaining disk space (496652779520 B)
[2025-06-04 19:47:21] 2025-06-04 17:46:37,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:47:21] 2025-06-04 17:46:37,865 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:47:21] 2025-06-04 17:46:37,865 | INFO     | update_server=False
[2025-06-04 19:47:21] 2025-06-04 17:46:37,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:47:21] 2025-06-04 17:46:38,086 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:47:21] 2025-06-04 17:46:38,086 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:47:21] 2025-06-04 17:46:38,086 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:47:21] 2025-06-04 17:46:38,395 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:47:21] 2025-06-04 17:46:38,664 | INFO     | all data control threads have been joined
[2025-06-04 19:47:21] 2025-06-04 17:46:38,771 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:47:21] 2025-06-04 17:46:38,771 | INFO     | aborting loop
[2025-06-04 19:47:21] 2025-06-04 17:46:38,871 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:38,954 | INFO     | all job control threads have been joined
[2025-06-04 19:47:21] 2025-06-04 17:46:39,031 | INFO     | all payload control threads have been joined
[2025-06-04 19:47:21] 2025-06-04 17:46:39,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:47:21] 2025-06-04 17:46:39,131 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:39,278 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:39,366 | INFO     | [job] validate thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:39,642 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:39,650 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:39,670 | INFO     | [data] control thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:39,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:47:21] 2025-06-04 17:46:39,777 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:39,802 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:39,960 | INFO     | [job] control thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:40,020 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:40,037 | INFO     | [payload] control thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:40,091 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:40,681 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:41,083 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:42,404 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:47:21] 2025-06-04 17:46:42,808 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140097445033792)>', '<ExcThread(monitor, started 140096858744576)>']
[2025-06-04 19:47:21] 2025-06-04 17:46:43,116 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:47:21] 2025-06-04 17:46:43,116 | INFO     | [monitor] control thread has ended
[2025-06-04 19:47:21] 2025-06-04 17:46:47,834 | INFO     | all workflow threads have been joined
[2025-06-04 19:47:21] 2025-06-04 17:46:47,834 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:47:21] 2025-06-04 17:46:47,834 | INFO     | traces error code: 0
[2025-06-04 19:47:21] 2025-06-04 17:46:47,835 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:47:21] 2025-06-04 17:46:48,200 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:47:21] 2025-06-04 17:46:48,283 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:47:21] 2025-06-04 17:46:48,397 [wrapper] pilotpid: 19544
[2025-06-04 19:47:21] 2025-06-04 17:46:48,504 [wrapper] Pilot exit status: 0
[2025-06-04 19:47:21] 2025-06-04 17:46:48,820 [wrapper] pandaids: 6678074764
[2025-06-04 19:47:21] 2025-06-04 17:46:49,711 [wrapper] cleanup supervisor_pilot 14322 19545
[2025-06-04 19:47:21] 2025-06-04 17:46:49,833 [wrapper] Test setup, not cleaning
[2025-06-04 19:47:21] 2025-06-04 17:46:49,966 [wrapper] apfmon messages muted
[2025-06-04 19:47:21] 2025-06-04 17:46:50,038 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:47:21] 2025-06-04 17:46:50,112 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:47:21]  *** Error codes and diagnostics ***
[2025-06-04 19:47:21]     "exeErrorCode": 0,
[2025-06-04 19:47:21]     "exeErrorDiag": "",
[2025-06-04 19:47:21]     "pilotErrorCode": 0,
[2025-06-04 19:47:21]     "pilotErrorDiag": "",
[2025-06-04 19:47:21]  *** Listing of results directory ***
[2025-06-04 19:47:21] total 392068
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc    495897 Jun  3 23:15 pilot3.tar.gz
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc      5111 Jun  3 23:36 queuedata.json
[2025-06-04 19:47:21] -rwx------. 1 boinc boinc     37140 Jun  3 23:37 runpilot2-wrapper.sh
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc       100 Jun  4 15:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:47:21] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 15:10 run_atlas
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc       105 Jun  4 15:10 job.xml
[2025-06-04 19:47:21] -rw-r--r--. 2 boinc boinc 215736956 Jun  4 15:10 EVNT.45006593._001847.pool.root.1
[2025-06-04 19:47:21] drwxrwx--x. 2 boinc boinc        68 Jun  4 15:10 shared
[2025-06-04 19:47:21] -rw-r--r--. 2 boinc boinc    508881 Jun  4 15:10 input.tar.gz
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc      6393 Jun  4 15:10 init_data.xml
[2025-06-04 19:47:21] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:10 start_atlas.sh
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc         0 Jun  4 15:10 boinc_lockfile
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc      2525 Jun  4 15:41 pandaJob.out
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc    986819 Jun  4 15:44 agis_schedconf.cvmfs.json
[2025-06-04 19:47:21] drwx------. 4 boinc boinc      4096 Jun  4 15:44 pilot3
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc 178661392 Jun  4 19:43 HITS.45006595._046051.pool.root.1
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc       531 Jun  4 19:43 boinc_task_state.xml
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc      1013 Jun  4 19:44 memory_monitor_summary.json
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc   1598969 Jun  4 19:44 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc    390730 Jun  4 19:45 log.45006595._046051.job.log.tgz.1
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc        95 Jun  4 19:46 pilot_heartbeat.json
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc      7688 Jun  4 19:46 heartbeat.json
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc      4417 Jun  4 19:46 pilotlog.txt
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc   1234829 Jun  4 19:46 log.45006595._046051.job.log.1
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc       357 Jun  4 19:46 output.list
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc       620 Jun  4 19:46 runtime_log
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc   1648640 Jun  4 19:46 result.tar.gz
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc       657 Jun  4 19:46 sGALDmqUog7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmTFmKDmNm3qDn.diag
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc      8673 Jun  4 19:46 runtime_log.err
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc      8192 Jun  4 19:47 boinc_mmap_file
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc        28 Jun  4 19:47 wrapper_checkpoint.txt
[2025-06-04 19:47:21] -rw-r--r--. 1 boinc boinc     20526 Jun  4 19:47 stderr.txt
[2025-06-04 19:47:21] HITS file was successfully produced:
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc 178661392 Jun  4 19:43 shared/HITS.pool.root.1
[2025-06-04 19:47:21]  *** Contents of shared directory: ***
[2025-06-04 19:47:21] total 387288
[2025-06-04 19:47:21] -rw-r--r--. 2 boinc boinc 215736956 Jun  4 15:10 ATLAS.root_0
[2025-06-04 19:47:21] -rw-r--r--. 2 boinc boinc    508881 Jun  4 15:10 input.tar.gz
[2025-06-04 19:47:21] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:10 start_atlas.sh
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc 178661392 Jun  4 19:43 HITS.pool.root.1
[2025-06-04 19:47:21] -rw-------. 1 boinc boinc   1648640 Jun  4 19:46 result.tar.gz
19:47:22 (30202): run_atlas exited; CPU time 51697.424899
19:47:22 (30202): called boinc_finish(0)

</stderr_txt>
]]>

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