Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:04:47 (32611): wrapper (7.7.26015): starting
01:04:47 (32611): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 01:04:47] Arguments: --nthreads 8
[2025-06-04 01:04:47] Threads: 8
[2025-06-04 01:04:47] Checking for CVMFS
[2025-06-04 01:04:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:04:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:04:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:04:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:04:47] 2.11.2.0 2817 35238 78192 146768 3 58 13152873 20275200 1 130560 0 11775565 99.949 6226898 7761 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 01:04:47] CVMFS is ok
[2025-06-04 01:04:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:04:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:04:47] Further information can be found at the LHC@home message board.
[2025-06-04 01:04:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:04:47] Checking for apptainer binary...
[2025-06-04 01:04:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:04:47] Running /usr/bin/apptainer --version
[2025-06-04 01:04:47] apptainer version 1.3.2-1.el7
[2025-06-04 01:04:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:04:49] c-204-21.aglt2.org
[2025-06-04 01:04:49] apptainer works
[2025-06-04 01:04:49] Set ATHENA_PROC_NUMBER=8
[2025-06-04 01:04:49] Set ATHENA_CORE_NUMBER=8
[2025-06-04 01:04:49] Starting ATLAS job with PandaID=6678285914
[2025-06-04 01:04:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:12:30 (24351): wrapper (7.7.26015): starting
02:12:30 (24351): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 02:12:30] Arguments: --nthreads 8
[2025-06-04 02:12:30] Threads: 8
[2025-06-04 02:12:30] This job has been restarted, cleaning up previous attempt
[2025-06-04 02:12:30] Checking for CVMFS
[2025-06-04 02:12:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 02:12:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 02:12:31] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 02:12:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 02:12:31] 2.11.2.0 2817 35306 78240 146770 0 1 13207949 20275201 1 130560 0 11843813 99.950 6229569 7764 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 02:12:31] CVMFS is ok
[2025-06-04 02:12:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:12:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:12:31] Further information can be found at the LHC@home message board.
[2025-06-04 02:12:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:12:31] Checking for apptainer binary...
[2025-06-04 02:12:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 02:12:31] Running /usr/bin/apptainer --version
[2025-06-04 02:12:31] apptainer version 1.3.2-1.el7
[2025-06-04 02:12:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:12:33] c-204-21.aglt2.org
[2025-06-04 02:12:33] apptainer works
[2025-06-04 02:12:33] Set ATHENA_PROC_NUMBER=8
[2025-06-04 02:12:33] Set ATHENA_CORE_NUMBER=8
[2025-06-04 02:12:33] Starting ATLAS job with PandaID=6678285914
[2025-06-04 02:12:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:05:45]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:05:45] 2025-06-04 08:05:32,752 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678285914/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:05:45] 2025-06-04 08:05:32,754 | INFO     | extracted standard info from prmon json
[2025-06-04 04:05:45] 2025-06-04 08:05:32,754 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:05:45] 2025-06-04 08:05:32,754 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:05:45] 2025-06-04 08:05:32,755 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:05:45] 2025-06-04 08:05:32,755 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:05:45] 2025-06-04 08:05:32,759 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:05:45] 2025-06-04 08:05:32,759 | INFO     | sum of square deviations: 424045160.0
[2025-06-04 04:05:45] 2025-06-04 08:05:32,760 | INFO     | sum of deviations: 6339385960.000001
[2025-06-04 04:05:45] 2025-06-04 08:05:32,760 | INFO     | mean x: 1749020959.0
[2025-06-04 04:05:45] 2025-06-04 08:05:32,760 | INFO     | mean y: 2464011.261261261
[2025-06-04 04:05:45] 2025-06-04 08:05:32,761 | INFO     | -- intersect: -26145031484.80887
[2025-06-04 04:05:45] 2025-06-04 08:05:32,761 | INFO     | intersect: -26145031484.80887
[2025-06-04 04:05:45] 2025-06-04 08:05:32,761 | INFO     | chi2: 2.2728850131860687
[2025-06-04 04:05:45] 2025-06-04 08:05:32,762 | INFO     | sum of square deviations: 369281342.5
[2025-06-04 04:05:45] 2025-06-04 08:05:32,762 | INFO     | sum of deviations: 13446142251.5
[2025-06-04 04:05:45] 2025-06-04 08:05:32,762 | INFO     | mean x: 1749020806.5
[2025-06-04 04:05:45] 2025-06-04 08:05:32,763 | INFO     | mean y: 2483064.0094339624
[2025-06-04 04:05:45] 2025-06-04 08:05:32,763 | INFO     | -- intersect: -63682246865.26463
[2025-06-04 04:05:45] 2025-06-04 08:05:32,763 | INFO     | intersect: -63682246865.26463
[2025-06-04 04:05:45] 2025-06-04 08:05:32,763 | INFO     | chi2: 1.5047526880191477
[2025-06-04 04:05:45] 2025-06-04 08:05:32,764 | INFO     | current chi2=1.5047526880191477 (change=33.795476705184214 %)
[2025-06-04 04:05:45] 2025-06-04 08:05:32,764 | INFO     | sum of square deviations: 319447850.0
[2025-06-04 04:05:45] 2025-06-04 08:05:32,764 | INFO     | sum of deviations: 13143939497.999998
[2025-06-04 04:05:45] 2025-06-04 08:05:32,765 | INFO     | mean x: 1749020654.0
[2025-06-04 04:05:45] 2025-06-04 08:05:32,765 | INFO     | mean y: 2482138.5247524753
[2025-06-04 04:05:45] 2025-06-04 08:05:32,765 | INFO     | -- intersect: -71962383666.42084
[2025-06-04 04:05:45] 2025-06-04 08:05:32,765 | INFO     | intersect: -71962383666.42084
[2025-06-04 04:05:45] 2025-06-04 08:05:32,765 | INFO     | chi2: 1.5058760369241024
[2025-06-04 04:05:45] 2025-06-04 08:05:32,765 | INFO     | current chi2=1.5058760369241024 (change=-0.07465339081290921 %)
[2025-06-04 04:05:45] 2025-06-04 08:05:32,765 | INFO     | right removable region: 100
[2025-06-04 04:05:45] 2025-06-04 08:05:32,766 | INFO     | sum of square deviations: 369281342.5
[2025-06-04 04:05:45] 2025-06-04 08:05:32,766 | INFO     | sum of deviations: -10427031187.5
[2025-06-04 04:05:45] 2025-06-04 08:05:32,766 | INFO     | mean x: 1749021111.5
[2025-06-04 04:05:45] 2025-06-04 08:05:32,766 | INFO     | mean y: 2509802.349056604
[2025-06-04 04:05:45] 2025-06-04 08:05:32,767 | INFO     | -- intersect: 49387885065.94341
[2025-06-04 04:05:45] 2025-06-04 08:05:32,767 | INFO     | intersect: 49387885065.94341
[2025-06-04 04:05:45] 2025-06-04 08:05:32,767 | INFO     | chi2: 0.8346214449404578
[2025-06-04 04:05:45] 2025-06-04 08:05:32,767 | INFO     | current chi2=0.8346214449404578 (change=63.27920505883807 %)
[2025-06-04 04:05:45] 2025-06-04 08:05:32,767 | INFO     | sum of square deviations: 319447850.0
[2025-06-04 04:05:45] 2025-06-04 08:05:32,768 | INFO     | sum of deviations: -11731449362.0
[2025-06-04 04:05:45] 2025-06-04 08:05:32,768 | INFO     | mean x: 1749021264.0
[2025-06-04 04:05:45] 2025-06-04 08:05:32,768 | INFO     | mean y: 2513664.702970297
[2025-06-04 04:05:45] 2025-06-04 08:05:32,768 | INFO     | -- intersect: 64233825259.62288
[2025-06-04 04:05:45] 2025-06-04 08:05:32,768 | INFO     | intersect: 64233825259.62288
[2025-06-04 04:05:45] 2025-06-04 08:05:32,768 | INFO     | chi2: 0.808621128321833
[2025-06-04 04:05:45] 2025-06-04 08:05:32,769 | INFO     | current chi2=0.808621128321833 (change=3.1152226888298635 %)
[2025-06-04 04:05:45] 2025-06-04 08:05:32,769 | INFO     | left removable region: 20
[2025-06-04 04:05:45] 2025-06-04 08:05:32,769 | INFO     | sum of square deviations: 158737860.0
[2025-06-04 04:05:45] 2025-06-04 08:05:32,769 | INFO     | sum of deviations: -3561747361.0
[2025-06-04 04:05:45] 2025-06-04 08:05:32,769 | INFO     | mean x: 1749021233.5
[2025-06-04 04:05:45] 2025-06-04 08:05:32,770 | INFO     | mean y: 2538265.625
[2025-06-04 04:05:45] 2025-06-04 08:05:32,770 | INFO     | -- intersect: 39246936311.25564
[2025-06-04 04:05:45] 2025-06-04 08:05:32,770 | INFO     | intersect: 39246936311.25564
[2025-06-04 04:05:45] 2025-06-04 08:05:32,770 | INFO     | chi2: 0.005488464633144845
[2025-06-04 04:05:45] 2025-06-04 08:05:32,770 | INFO     | -- intersect: 39246936311.25564
[2025-06-04 04:05:45] 2025-06-04 08:05:32,770 | INFO     | current memory leak: -22.44 B/s (using 80 data points, chi2=0.01)
[2025-06-04 04:05:45] 2025-06-04 08:05:32,771 | INFO     | ..............................
[2025-06-04 04:05:45] 2025-06-04 08:05:32,771 | INFO     | . Timing measurements:
[2025-06-04 04:05:45] 2025-06-04 08:05:32,771 | INFO     | . get job = 0 s
[2025-06-04 04:05:45] 2025-06-04 08:05:32,771 | INFO     | . initial setup = 1 s
[2025-06-04 04:05:45] 2025-06-04 08:05:32,771 | INFO     | . payload setup = 12 s
[2025-06-04 04:05:45] 2025-06-04 08:05:32,771 | INFO     | . stage-in = 0 s
[2025-06-04 04:05:45] 2025-06-04 08:05:32,772 | INFO     | . payload execution = 6718 s
[2025-06-04 04:05:45] 2025-06-04 08:05:32,772 | INFO     | . stage-out = 2 s
[2025-06-04 04:05:45] 2025-06-04 08:05:32,772 | INFO     | . log creation = 0 s
[2025-06-04 04:05:45] 2025-06-04 08:05:32,772 | INFO     | ..............................
[2025-06-04 04:05:45] 2025-06-04 08:05:33,017 | INFO     | 
[2025-06-04 04:05:45] 2025-06-04 08:05:33,017 | INFO     | job summary report
[2025-06-04 04:05:45] 2025-06-04 08:05:33,018 | INFO     | --------------------------------------------------
[2025-06-04 04:05:45] 2025-06-04 08:05:33,018 | INFO     | PanDA job id: 6678285914
[2025-06-04 04:05:45] 2025-06-04 08:05:33,018 | INFO     | task id: 45006595
[2025-06-04 04:05:45] 2025-06-04 08:05:33,018 | INFO     | errors: (none)
[2025-06-04 04:05:45] 2025-06-04 08:05:33,018 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:05:45] 2025-06-04 08:05:33,019 | INFO     | pilot state: finished 
[2025-06-04 04:05:45] 2025-06-04 08:05:33,019 | INFO     | transexitcode: 0
[2025-06-04 04:05:45] 2025-06-04 08:05:33,019 | INFO     | exeerrorcode: 0
[2025-06-04 04:05:45] 2025-06-04 08:05:33,019 | INFO     | exeerrordiag: 
[2025-06-04 04:05:45] 2025-06-04 08:05:33,019 | INFO     | exitcode: 0
[2025-06-04 04:05:45] 2025-06-04 08:05:33,019 | INFO     | exitmsg: OK
[2025-06-04 04:05:45] 2025-06-04 08:05:33,020 | INFO     | cpuconsumptiontime: 50008 s
[2025-06-04 04:05:45] 2025-06-04 08:05:33,020 | INFO     | nevents: 400
[2025-06-04 04:05:45] 2025-06-04 08:05:33,020 | INFO     | neventsw: 0
[2025-06-04 04:05:45] 2025-06-04 08:05:33,020 | INFO     | pid: 2485
[2025-06-04 04:05:45] 2025-06-04 08:05:33,020 | INFO     | pgrp: 2485
[2025-06-04 04:05:45] 2025-06-04 08:05:33,021 | INFO     | corecount: 8
[2025-06-04 04:05:45] 2025-06-04 08:05:33,021 | INFO     | event service: False
[2025-06-04 04:05:45] 2025-06-04 08:05:33,021 | INFO     | sizes: {0: 2404356, 1: 2405212, 7: 2405418, 12: 2405446, 6733: 2432399, 6734: 2432398, 6737: 2441523, 6738: 2441579, 6746: 2441749}
[2025-06-04 04:05:45] 2025-06-04 08:05:33,021 | INFO     | --------------------------------------------------
[2025-06-04 04:05:45] 2025-06-04 08:05:33,021 | INFO     | 
[2025-06-04 04:05:45] 2025-06-04 08:05:33,022 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 04:05:45] 2025-06-04 08:05:33,053 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,054 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,054 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,054 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,054 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,055 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,055 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,055 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,055 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,056 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,056 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,056 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,056 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,057 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,057 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,057 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,058 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:05:45] 2025-06-04 08:05:33,058 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,058 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:05:45] 2025-06-04 08:05:33,058 | INFO     | job 6678285914 has completed (purged errors)
[2025-06-04 04:05:45] 2025-06-04 08:05:33,059 | INFO     | overall cleanup function is called
[2025-06-04 04:05:45] 2025-06-04 08:05:34,069 | INFO     | --- collectZombieJob: --- 10, [2485]
[2025-06-04 04:05:45] 2025-06-04 08:05:34,069 | INFO     | zombie collector waiting for pid 2485
[2025-06-04 04:05:45] 2025-06-04 08:05:34,069 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:05:45] 2025-06-04 08:05:34,069 | INFO     | collected zombie processes
[2025-06-04 04:05:45] 2025-06-04 08:05:34,069 | INFO     | will attempt to kill all subprocesses of pid=2485
[2025-06-04 04:05:45] 2025-06-04 08:05:34,181 | INFO     | process IDs to be killed: [2485] (in reverse order)
[2025-06-04 04:05:45] 2025-06-04 08:05:34,241 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:05:45] 2025-06-04 08:05:34,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:05:45] 2025-06-04 08:05:34,247 | INFO     | did not find any defunct processes belonging to 2485
[2025-06-04 04:05:45] 2025-06-04 08:05:34,251 | INFO     | did not find any defunct processes belonging to 2485
[2025-06-04 04:05:45] 2025-06-04 08:05:34,251 | INFO     | ready for new job
[2025-06-04 04:05:45] 2025-06-04 08:05:34,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:05:45] 2025-06-04 08:05:34,254 | INFO     | **************************************
[2025-06-04 04:05:45] 2025-06-04 08:05:34,254 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:05:45] 2025-06-04 08:05:34,254 | INFO     | **************************************
[2025-06-04 04:05:45] 2025-06-04 08:05:34,254 | INFO     | 
[2025-06-04 04:05:45] 2025-06-04 08:05:34,255 | INFO     | architecture information:
[2025-06-04 04:05:45] 2025-06-04 08:05:34,256 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:05:45] 2025-06-04 08:05:34,276 | INFO     | cat /etc/os-release:
[2025-06-04 04:05:45] NAME="CentOS Linux"
[2025-06-04 04:05:45] VERSION="7 (Core)"
[2025-06-04 04:05:45] ID="centos"
[2025-06-04 04:05:45] ID_LIKE="rhel fedora"
[2025-06-04 04:05:45] VERSION_ID="7"
[2025-06-04 04:05:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:05:45] ANSI_COLOR="0;31"
[2025-06-04 04:05:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:05:45] HOME_URL="https://www.centos.org/"
[2025-06-04 04:05:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:05:45] 
[2025-06-04 04:05:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:05:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:05:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:05:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:05:45] 
[2025-06-04 04:05:45] 2025-06-04 08:05:34,277 | INFO     | **************************************
[2025-06-04 04:05:45] 2025-06-04 08:05:34,780 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 04:05:45] 2025-06-04 08:05:34,802 | INFO     | sufficient remaining disk space (18605932544 B)
[2025-06-04 04:05:45] 2025-06-04 08:05:34,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:05:45] 2025-06-04 08:05:34,803 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:05:45] 2025-06-04 08:05:34,803 | INFO     | update_server=False
[2025-06-04 04:05:45] 2025-06-04 08:05:34,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:05:45] 2025-06-04 08:05:34,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:05:45] 2025-06-04 08:05:34,806 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 04:05:45] 2025-06-04 08:05:34,808 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:05:45] 2025-06-04 08:05:34,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:05:45] 2025-06-04 08:05:34,809 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:05:45] 2025-06-04 08:05:34,892 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:05:45] 2025-06-04 08:05:34,919 | INFO     | all data control threads have been joined
[2025-06-04 04:05:45] 2025-06-04 08:05:34,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:05:45] 2025-06-04 08:05:35,055 | INFO     | all payload control threads have been joined
[2025-06-04 04:05:45] 2025-06-04 08:05:35,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:05:45] 2025-06-04 08:05:35,730 | INFO     | aborting loop
[2025-06-04 04:05:45] 2025-06-04 08:05:35,810 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:35,811 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:35,924 | INFO     | [data] control thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:36,056 | INFO     | [payload] control thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:36,287 | INFO     | all job control threads have been joined
[2025-06-04 04:05:45] 2025-06-04 08:05:36,334 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:36,369 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:36,396 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:36,730 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:36,868 | INFO     | [job] validate thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:36,897 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:37,192 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:37,241 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:37,252 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:37,292 | INFO     | [job] control thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:37,366 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:38,975 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:05:45] 2025-06-04 08:05:40,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140288699049792)>', '<ExcThread(monitor, started 140287456311040)>']
[2025-06-04 04:05:45] 2025-06-04 08:05:40,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:05:45] 2025-06-04 08:05:40,832 | INFO     | [monitor] control thread has ended
[2025-06-04 04:05:45] 2025-06-04 08:05:45,310 | INFO     | all workflow threads have been joined
[2025-06-04 04:05:45] 2025-06-04 08:05:45,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:05:45] 2025-06-04 08:05:45,319 | INFO     | traces error code: 0
[2025-06-04 04:05:45] 2025-06-04 08:05:45,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:05:45] 2025-06-04 08:05:45,444 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:05:45] 2025-06-04 08:05:45,450 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:05:45] 2025-06-04 08:05:45,454 [wrapper] pilotpid: 28327
[2025-06-04 04:05:45] 2025-06-04 08:05:45,459 [wrapper] Pilot exit status: 0
[2025-06-04 04:05:45] 2025-06-04 08:05:45,477 [wrapper] pandaids: 6678285914 6678285914
[2025-06-04 04:05:45] 2025-06-04 08:05:45,523 [wrapper] cleanup supervisor_pilot 32178 28328
[2025-06-04 04:05:45] 2025-06-04 08:05:45,527 [wrapper] Test setup, not cleaning
[2025-06-04 04:05:45] 2025-06-04 08:05:45,532 [wrapper] apfmon messages muted
[2025-06-04 04:05:45] 2025-06-04 08:05:45,537 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:05:45] 2025-06-04 08:05:45,541 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:05:45]  *** Error codes and diagnostics ***
[2025-06-04 04:05:45]     "exeErrorCode": 0,
[2025-06-04 04:05:45]     "exeErrorDiag": "",
[2025-06-04 04:05:45]     "pilotErrorCode": 0,
[2025-06-04 04:05:45]     "pilotErrorDiag": "",
[2025-06-04 04:05:45]  *** Listing of results directory ***
[2025-06-04 04:05:45] total 600828
[2025-06-04 04:05:45] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 22:52 pilot3.tar.gz
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 23:02 queuedata.json
[2025-06-04 04:05:45] -rwx------ 1 boincer umatlas     37140 Jun  3 23:03 runpilot2-wrapper.sh
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas       100 Jun  4 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:05:45] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 01:04 run_atlas
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas       105 Jun  4 01:04 job.xml
[2025-06-04 04:05:45] -rw-r--r-- 3 boincer umatlas 213884869 Jun  4 01:04 EVNT.45006593._002044.pool.root.1
[2025-06-04 04:05:45] -rw-r--r-- 3 boincer umatlas 213884869 Jun  4 01:04 ATLAS.root_0
[2025-06-04 04:05:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:04 start_atlas.sh
[2025-06-04 04:05:45] drwxrwx--x 2 boincer umatlas      4096 Jun  4 01:04 shared
[2025-06-04 04:05:45] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 01:04 input.tar.gz
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas         0 Jun  4 01:04 boinc_lockfile
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 02:12 pandaJob.out
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas    986745 Jun  4 02:12 agis_schedconf.cvmfs.json
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas      5905 Jun  4 04:01 init_data.xml
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas 181778574 Jun  4 04:04 HITS.45006595._051008.pool.root.1
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas      1049 Jun  4 04:05 memory_monitor_summary.json
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 04:05 boinc_mmap_file
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas        28 Jun  4 04:05 wrapper_checkpoint.txt
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas       531 Jun  4 04:05 boinc_task_state.xml
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas   1603667 Jun  4 04:05 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas    311872 Jun  4 04:05 log.45006595._051008.job.log.tgz.1
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas        96 Jun  4 04:05 pilot_heartbeat.json
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas      7748 Jun  4 04:05 heartbeat.json
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas      4476 Jun  4 04:05 pilotlog.txt
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas    621495 Jun  4 04:05 log.45006595._051008.job.log.1
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas       357 Jun  4 04:05 output.list
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas       620 Jun  4 04:05 runtime_log
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas    952320 Jun  4 04:05 result.tar.gz
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas      8744 Jun  4 04:05 runtime_log.err
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas       785 Jun  4 04:05 QqIMDmIatg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvymKDmF2InTn.diag
[2025-06-04 04:05:45] -rw-r--r-- 1 boincer umatlas     22965 Jun  4 04:05 stderr.txt
[2025-06-04 04:05:45] HITS file was successfully produced:
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas 181778574 Jun  4 04:04 shared/HITS.pool.root.1
[2025-06-04 04:05:45]  *** Contents of shared directory: ***
[2025-06-04 04:05:45] total 387844
[2025-06-04 04:05:45] -rw-r--r-- 3 boincer umatlas 213884869 Jun  4 01:04 ATLAS.root_0
[2025-06-04 04:05:45] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 01:04 start_atlas.sh
[2025-06-04 04:05:45] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 01:04 input.tar.gz
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas 181778574 Jun  4 04:04 HITS.pool.root.1
[2025-06-04 04:05:45] -rw------- 1 boincer umatlas    952320 Jun  4 04:05 result.tar.gz
04:05:47 (24351): run_atlas exited; CPU time 49963.994198
04:05:47 (24351): called boinc_finish(0)

</stderr_txt>
]]>

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