Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
01:58:52 (2955331): wrapper (7.7.26015): starting
01:58:52 (2955331): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 01:58:52] Arguments: --nthreads 4
[2025-06-04 01:58:52] Threads: 4
[2025-06-04 01:58:52] Checking for CVMFS
[2025-06-04 01:58:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:58:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:58:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:58:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:58:53] 2.12.6.0 2389267 2237 54168 146771 2 187 3473865 6144001 6454 130560 0 11717728 99.998 550586 4849 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.30:3128 1
[2025-06-04 01:58:53] CVMFS is ok
[2025-06-04 01:58:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:58:53] Checking for apptainer binary...
[2025-06-04 01:58:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:58:53] Running /usr/bin/apptainer --version
[2025-06-04 01:58:53] apptainer version 1.3.4
[2025-06-04 01:58:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:58:53] Starfish-Cruncher
[2025-06-04 01:58:53] apptainer works
[2025-06-04 01:58:53] Set ATHENA_PROC_NUMBER=4
[2025-06-04 01:58:53] Set ATHENA_CORE_NUMBER=4
[2025-06-04 01:58:53] Starting ATLAS job with PandaID=6667102793
[2025-06-04 01:58:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 04:40:41]  *** The last 200 lines of the pilot log: ***
[2025-06-04 04:40:41] 2025-06-04 09:40:28,984 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6667102793/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 04:40:41] 2025-06-04 09:40:28,985 | INFO     | extracted standard info from prmon json
[2025-06-04 04:40:41] 2025-06-04 09:40:28,985 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 04:40:41] 2025-06-04 09:40:28,985 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 04:40:41] 2025-06-04 09:40:28,985 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 04:40:41] 2025-06-04 09:40:28,985 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 04:40:41] 2025-06-04 09:40:28,988 | INFO     | fitting pss+swap vs Time
[2025-06-04 04:40:41] 2025-06-04 09:40:28,988 | INFO     | sum of square deviations: 1246386160.0
[2025-06-04 04:40:41] 2025-06-04 09:40:28,988 | INFO     | sum of deviations: 7990863177.000006
[2025-06-04 04:40:41] 2025-06-04 09:40:28,989 | INFO     | mean x: 1749025185.0
[2025-06-04 04:40:41] 2025-06-04 09:40:28,989 | INFO     | mean y: 2286235.289308176
[2025-06-04 04:40:41] 2025-06-04 09:40:28,989 | INFO     | -- intersect: -11211109255.609053
[2025-06-04 04:40:41] 2025-06-04 09:40:28,989 | INFO     | intersect: -11211109255.609053
[2025-06-04 04:40:41] 2025-06-04 09:40:28,989 | INFO     | chi2: 2.171819391229225
[2025-06-04 04:40:41] 2025-06-04 09:40:28,989 | INFO     | sum of square deviations: 1132458442.5
[2025-06-04 04:40:41] 2025-06-04 09:40:28,990 | INFO     | sum of deviations: 17413305037.0
[2025-06-04 04:40:41] 2025-06-04 09:40:28,990 | INFO     | mean x: 1749025032.5
[2025-06-04 04:40:41] 2025-06-04 09:40:28,990 | INFO     | mean y: 2298509.4155844157
[2025-06-04 04:40:41] 2025-06-04 09:40:28,990 | INFO     | -- intersect: -26891674165.675617
[2025-06-04 04:40:41] 2025-06-04 09:40:28,990 | INFO     | intersect: -26891674165.675617
[2025-06-04 04:40:41] 2025-06-04 09:40:28,990 | INFO     | chi2: 1.370847094765271
[2025-06-04 04:40:41] 2025-06-04 09:40:28,990 | INFO     | current chi2=1.370847094765271 (change=36.88024426426237 %)
[2025-06-04 04:40:41] 2025-06-04 09:40:28,991 | INFO     | sum of square deviations: 1025693650.0
[2025-06-04 04:40:41] 2025-06-04 09:40:28,991 | INFO     | sum of deviations: 16720479786.000002
[2025-06-04 04:40:41] 2025-06-04 09:40:28,991 | INFO     | mean x: 1749024880.0
[2025-06-04 04:40:41] 2025-06-04 09:40:28,991 | INFO     | mean y: 2297519.5503355702
[2025-06-04 04:40:41] 2025-06-04 09:40:28,991 | INFO     | -- intersect: -28509661339.950333
[2025-06-04 04:40:41] 2025-06-04 09:40:28,991 | INFO     | intersect: -28509661339.950333
[2025-06-04 04:40:41] 2025-06-04 09:40:28,992 | INFO     | chi2: 1.372300660657756
[2025-06-04 04:40:41] 2025-06-04 09:40:28,992 | INFO     | current chi2=1.372300660657756 (change=-0.10603413743484741 %)
[2025-06-04 04:40:41] 2025-06-04 09:40:28,992 | INFO     | right removable region: 148
[2025-06-04 04:40:41] 2025-06-04 09:40:28,992 | INFO     | sum of square deviations: 1132458442.5
[2025-06-04 04:40:41] 2025-06-04 09:40:28,993 | INFO     | sum of deviations: -11505505667.0
[2025-06-04 04:40:41] 2025-06-04 09:40:28,993 | INFO     | mean x: 1749025337.5
[2025-06-04 04:40:41] 2025-06-04 09:40:28,993 | INFO     | mean y: 2311884.896103896
[2025-06-04 04:40:41] 2025-06-04 09:40:28,993 | INFO     | -- intersect: 17771989055.484936
[2025-06-04 04:40:41] 2025-06-04 09:40:28,993 | INFO     | intersect: 17771989055.484936
[2025-06-04 04:40:41] 2025-06-04 09:40:28,993 | INFO     | chi2: 0.8393100738959342
[2025-06-04 04:40:41] 2025-06-04 09:40:28,993 | INFO     | current chi2=0.8393100738959342 (change=61.35451790855896 %)
[2025-06-04 04:40:41] 2025-06-04 09:40:28,993 | INFO     | sum of square deviations: 1025693650.0
[2025-06-04 04:40:41] 2025-06-04 09:40:28,994 | INFO     | sum of deviations: -10107794489.0
[2025-06-04 04:40:41] 2025-06-04 09:40:28,994 | INFO     | mean x: 1749025490.0
[2025-06-04 04:40:41] 2025-06-04 09:40:28,994 | INFO     | mean y: 2309882.751677852
[2025-06-04 04:40:41] 2025-06-04 09:40:28,994 | INFO     | -- intersect: 17238245982.1343
[2025-06-04 04:40:41] 2025-06-04 09:40:28,994 | INFO     | intersect: 17238245982.1343
[2025-06-04 04:40:41] 2025-06-04 09:40:28,994 | INFO     | chi2: 0.8384039368716085
[2025-06-04 04:40:41] 2025-06-04 09:40:28,994 | INFO     | current chi2=0.8384039368716085 (change=0.10796212895664324 %)
[2025-06-04 04:40:41] 2025-06-04 09:40:28,994 | INFO     | left removable region: 20
[2025-06-04 04:40:41] 2025-06-04 09:40:28,995 | INFO     | sum of square deviations: 650252192.0
[2025-06-04 04:40:41] 2025-06-04 09:40:28,995 | INFO     | sum of deviations: 1562606042.5
[2025-06-04 04:40:41] 2025-06-04 09:40:28,995 | INFO     | mean x: 1749025459.5
[2025-06-04 04:40:41] 2025-06-04 09:40:28,995 | INFO     | mean y: 2319258.2421875
[2025-06-04 04:40:41] 2025-06-04 09:40:28,995 | INFO     | -- intersect: -4200723476.7541428
[2025-06-04 04:40:41] 2025-06-04 09:40:28,995 | INFO     | intersect: -4200723476.7541428
[2025-06-04 04:40:41] 2025-06-04 09:40:28,996 | INFO     | chi2: 0.0002305415021066237
[2025-06-04 04:40:41] 2025-06-04 09:40:28,996 | INFO     | -- intersect: -4200723476.7541428
[2025-06-04 04:40:41] 2025-06-04 09:40:28,996 | INFO     | current memory leak: 2.40 B/s (using 128 data points, chi2=0.00)
[2025-06-04 04:40:41] 2025-06-04 09:40:28,996 | INFO     | ..............................
[2025-06-04 04:40:41] 2025-06-04 09:40:28,996 | INFO     | . Timing measurements:
[2025-06-04 04:40:41] 2025-06-04 09:40:28,996 | INFO     | . get job = 0 s
[2025-06-04 04:40:41] 2025-06-04 09:40:28,996 | INFO     | . initial setup = 2 s
[2025-06-04 04:40:41] 2025-06-04 09:40:28,997 | INFO     | . payload setup = 4 s
[2025-06-04 04:40:41] 2025-06-04 09:40:28,997 | INFO     | . stage-in = 0 s
[2025-06-04 04:40:41] 2025-06-04 09:40:28,997 | INFO     | . payload execution = 9657 s
[2025-06-04 04:40:41] 2025-06-04 09:40:28,997 | INFO     | . stage-out = 0 s
[2025-06-04 04:40:41] 2025-06-04 09:40:28,997 | INFO     | . log creation = 0 s
[2025-06-04 04:40:41] 2025-06-04 09:40:28,997 | INFO     | ..............................
[2025-06-04 04:40:41] 2025-06-04 09:40:29,106 | INFO     | 
[2025-06-04 04:40:41] 2025-06-04 09:40:29,106 | INFO     | job summary report
[2025-06-04 04:40:41] 2025-06-04 09:40:29,106 | INFO     | --------------------------------------------------
[2025-06-04 04:40:41] 2025-06-04 09:40:29,106 | INFO     | PanDA job id: 6667102793
[2025-06-04 04:40:41] 2025-06-04 09:40:29,106 | INFO     | task id: 44871837
[2025-06-04 04:40:41] 2025-06-04 09:40:29,106 | INFO     | errors: (none)
[2025-06-04 04:40:41] 2025-06-04 09:40:29,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 04:40:41] 2025-06-04 09:40:29,106 | INFO     | pilot state: finished 
[2025-06-04 04:40:41] 2025-06-04 09:40:29,106 | INFO     | transexitcode: 0
[2025-06-04 04:40:41] 2025-06-04 09:40:29,106 | INFO     | exeerrorcode: 0
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | exeerrordiag: 
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | exitcode: 0
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | exitmsg: OK
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | cpuconsumptiontime: 37311 s
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | nevents: 400
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | neventsw: 0
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | pid: 2965926
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | pgrp: 2965926
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | corecount: 4
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | event service: False
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | sizes: {0: 2405241, 4: 2405447, 11: 2405475, 9665: 2433853, 9667: 2442808, 9669: 2442864, 9673: 2443162}
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | --------------------------------------------------
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | 
[2025-06-04 04:40:41] 2025-06-04 09:40:29,107 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-06-04 04:40:41] 2025-06-04 09:40:29,125 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,125 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,125 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,125 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,125 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,125 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,125 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,125 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,125 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,125 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,126 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,126 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,126 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,126 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,126 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,126 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 04:40:41] 2025-06-04 09:40:29,126 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,126 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 04:40:41] 2025-06-04 09:40:29,126 | INFO     | job 6667102793 has completed (purged errors)
[2025-06-04 04:40:41] 2025-06-04 09:40:29,126 | INFO     | overall cleanup function is called
[2025-06-04 04:40:41] 2025-06-04 09:40:30,134 | INFO     | --- collectZombieJob: --- 10, [2965926]
[2025-06-04 04:40:41] 2025-06-04 09:40:30,134 | INFO     | zombie collector waiting for pid 2965926
[2025-06-04 04:40:41] 2025-06-04 09:40:30,134 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 04:40:41] 2025-06-04 09:40:30,134 | INFO     | collected zombie processes
[2025-06-04 04:40:41] 2025-06-04 09:40:30,134 | INFO     | will attempt to kill all subprocesses of pid=2965926
[2025-06-04 04:40:41] 2025-06-04 09:40:30,308 | INFO     | process IDs to be killed: [2965926] (in reverse order)
[2025-06-04 04:40:41] 2025-06-04 09:40:30,369 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 04:40:41] 2025-06-04 09:40:30,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 04:40:41] 2025-06-04 09:40:30,375 | INFO     | did not find any defunct processes belonging to 2965926
[2025-06-04 04:40:41] 2025-06-04 09:40:30,379 | INFO     | did not find any defunct processes belonging to 2965926
[2025-06-04 04:40:41] 2025-06-04 09:40:30,380 | INFO     | ready for new job
[2025-06-04 04:40:41] 2025-06-04 09:40:30,380 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 04:40:41] 2025-06-04 09:40:30,381 | INFO     | **************************************
[2025-06-04 04:40:41] 2025-06-04 09:40:30,381 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 04:40:41] 2025-06-04 09:40:30,381 | INFO     | **************************************
[2025-06-04 04:40:41] 2025-06-04 09:40:30,381 | INFO     | 
[2025-06-04 04:40:41] 2025-06-04 09:40:30,383 | INFO     | architecture information:
[2025-06-04 04:40:41] 2025-06-04 09:40:30,383 | INFO     | executing command: cat /etc/os-release
[2025-06-04 04:40:41] 2025-06-04 09:40:30,396 | INFO     | cat /etc/os-release:
[2025-06-04 04:40:41] NAME="CentOS Linux"
[2025-06-04 04:40:41] VERSION="7 (Core)"
[2025-06-04 04:40:41] ID="centos"
[2025-06-04 04:40:41] ID_LIKE="rhel fedora"
[2025-06-04 04:40:41] VERSION_ID="7"
[2025-06-04 04:40:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 04:40:41] ANSI_COLOR="0;31"
[2025-06-04 04:40:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 04:40:41] HOME_URL="https://www.centos.org/"
[2025-06-04 04:40:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 04:40:41] 
[2025-06-04 04:40:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 04:40:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 04:40:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 04:40:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 04:40:41] 
[2025-06-04 04:40:41] 2025-06-04 09:40:30,396 | INFO     | **************************************
[2025-06-04 04:40:41] 2025-06-04 09:40:30,899 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-06-04 04:40:41] 2025-06-04 09:40:30,912 | INFO     | sufficient remaining disk space (1814384607232 B)
[2025-06-04 04:40:41] 2025-06-04 09:40:30,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 04:40:41] 2025-06-04 09:40:30,913 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 04:40:41] 2025-06-04 09:40:30,913 | INFO     | update_server=False
[2025-06-04 04:40:41] 2025-06-04 09:40:30,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 04:40:41] 2025-06-04 09:40:30,913 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 04:40:41] 2025-06-04 09:40:30,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:40:41] 2025-06-04 09:40:30,913 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 04:40:41] 2025-06-04 09:40:30,914 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 04:40:41] 2025-06-04 09:40:30,914 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 04:40:41] 2025-06-04 09:40:31,234 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 04:40:41] 2025-06-04 09:40:31,426 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 04:40:41] 2025-06-04 09:40:31,667 | INFO     | all data control threads have been joined
[2025-06-04 04:40:41] 2025-06-04 09:40:31,733 | INFO     | all payload control threads have been joined
[2025-06-04 04:40:41] 2025-06-04 09:40:31,852 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 04:40:41] 2025-06-04 09:40:31,853 | INFO     | aborting loop
[2025-06-04 04:40:41] 2025-06-04 09:40:31,918 | INFO     | [job] retrieve thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:31,919 | INFO     | [job] queue monitor thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:32,132 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:32,287 | INFO     | [payload] validate_post thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:32,323 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:32,336 | INFO     | all job control threads have been joined
[2025-06-04 04:40:41] 2025-06-04 09:40:32,549 | INFO     | [data] copytool_in thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:32,669 | INFO     | [data] control thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:32,738 | INFO     | [payload] control thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:32,858 | INFO     | [job] job monitor thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:32,895 | INFO     | [payload] failed_post thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:33,110 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:33,288 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:33,300 | INFO     | [job] validate thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:33,341 | INFO     | [job] control thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:33,430 | INFO     | [data] copytool_out thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:35,239 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 04:40:41] 2025-06-04 09:40:35,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140265008760640)>', '<ExcThread(monitor, started 140264538638080)>']
[2025-06-04 04:40:41] 2025-06-04 09:40:35,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 04:40:41] 2025-06-04 09:40:35,939 | INFO     | [monitor] control thread has ended
[2025-06-04 04:40:41] 2025-06-04 09:40:40,899 | INFO     | all workflow threads have been joined
[2025-06-04 04:40:41] 2025-06-04 09:40:40,899 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 04:40:41] 2025-06-04 09:40:40,899 | INFO     | traces error code: 0
[2025-06-04 04:40:41] 2025-06-04 09:40:40,899 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 04:40:41] 2025-06-04 09:40:40,979 [wrapper] ==== pilot stdout END ====
[2025-06-04 04:40:41] 2025-06-04 09:40:40,981 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 04:40:41] 2025-06-04 09:40:40,982 [wrapper] pilotpid: 2959110
[2025-06-04 04:40:41] 2025-06-04 09:40:40,985 [wrapper] Pilot exit status: 0
[2025-06-04 04:40:41] 2025-06-04 09:40:40,993 [wrapper] pandaids: 6667102793
[2025-06-04 04:40:41] 2025-06-04 09:40:41,031 [wrapper] cleanup supervisor_pilot 3242609 2959111
[2025-06-04 04:40:41] 2025-06-04 09:40:41,033 [wrapper] Test setup, not cleaning
[2025-06-04 04:40:41] 2025-06-04 09:40:41,035 [wrapper] apfmon messages muted
[2025-06-04 04:40:41] 2025-06-04 09:40:41,037 [wrapper] ==== wrapper stdout END ====
[2025-06-04 04:40:41] 2025-06-04 09:40:41,039 [wrapper] ==== wrapper stderr END ====
[2025-06-04 04:40:41]  *** Error codes and diagnostics ***
[2025-06-04 04:40:41]     "exeErrorCode": 0,
[2025-06-04 04:40:41]     "exeErrorDiag": "",
[2025-06-04 04:40:41]     "pilotErrorCode": 0,
[2025-06-04 04:40:41]     "pilotErrorDiag": "",
[2025-06-04 04:40:41]  *** Listing of results directory ***
[2025-06-04 04:40:41] total 420908
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc    495897 May 27 08:43 pilot3.tar.gz
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc      5111 May 27 09:30 queuedata.json
[2025-06-04 04:40:41] -rwx------ 1 boinc boinc     37140 May 27 09:33 runpilot2-wrapper.sh
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc       100 Jun  4 01:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 04:40:41] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 01:58 run_atlas
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc       105 Jun  4 01:58 job.xml
[2025-06-04 04:40:41] -rw-r--r-- 2 boinc boinc 227100063 Jun  4 01:58 EVNT.44871834._002705.pool.root.1
[2025-06-04 04:40:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 01:58 start_atlas.sh
[2025-06-04 04:40:41] drwxrwx--x 2 boinc boinc      4096 Jun  4 01:58 shared
[2025-06-04 04:40:41] -rw-r--r-- 2 boinc boinc    508873 Jun  4 01:58 input.tar.gz
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc      9628 Jun  4 01:58 init_data.xml
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc         0 Jun  4 01:58 boinc_lockfile
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc      2559 Jun  4 01:58 pandaJob.out
[2025-06-04 04:40:41] -rw------- 1 boinc boinc    986745 Jun  4 01:58 agis_schedconf.cvmfs.json
[2025-06-04 04:40:41] -rw------- 1 boinc boinc   1603667 Jun  4 01:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 04:40:41] drwx------ 4 boinc boinc      4096 Jun  4 01:59 pilot3
[2025-06-04 04:40:41] -rw------- 1 boinc boinc 197660914 Jun  4 04:39 HITS.44871837._068777.pool.root.1
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc       529 Jun  4 04:40 boinc_task_state.xml
[2025-06-04 04:40:41] -rw------- 1 boinc boinc      1025 Jun  4 04:40 memory_monitor_summary.json
[2025-06-04 04:40:41] -rw------- 1 boinc boinc    283336 Jun  4 04:40 log.44871837._068777.job.log.tgz.1
[2025-06-04 04:40:41] -rw------- 1 boinc boinc      7682 Jun  4 04:40 heartbeat.json
[2025-06-04 04:40:41] -rw------- 1 boinc boinc        95 Jun  4 04:40 pilot_heartbeat.json
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc        27 Jun  4 04:40 wrapper_checkpoint.txt
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc      8192 Jun  4 04:40 boinc_mmap_file
[2025-06-04 04:40:41] -rw------- 1 boinc boinc      4485 Jun  4 04:40 pilotlog.txt
[2025-06-04 04:40:41] -rw------- 1 boinc boinc    918625 Jun  4 04:40 log.44871837._068777.job.log.1
[2025-06-04 04:40:41] -rw------- 1 boinc boinc       357 Jun  4 04:40 output.list
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc       620 Jun  4 04:40 runtime_log
[2025-06-04 04:40:41] -rw------- 1 boinc boinc   1218560 Jun  4 04:40 result.tar.gz
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc      8761 Jun  4 04:40 runtime_log.err
[2025-06-04 04:40:41] -rw------- 1 boinc boinc       652 Jun  4 04:40 kf2KDmuXAe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBfZKDmVPnggm.diag
[2025-06-04 04:40:41] -rw-r--r-- 1 boinc boinc     20566 Jun  4 04:40 stderr.txt
[2025-06-04 04:40:41] HITS file was successfully produced:
[2025-06-04 04:40:41] -rw------- 1 boinc boinc 197660914 Jun  4 04:39 shared/HITS.pool.root.1
[2025-06-04 04:40:41]  *** Contents of shared directory: ***
[2025-06-04 04:40:41] total 416528
[2025-06-04 04:40:41] -rw-r--r-- 2 boinc boinc 227100063 Jun  4 01:58 ATLAS.root_0
[2025-06-04 04:40:41] -rw-r--r-- 2 boinc boinc     15093 Jun  4 01:58 start_atlas.sh
[2025-06-04 04:40:41] -rw-r--r-- 2 boinc boinc    508873 Jun  4 01:58 input.tar.gz
[2025-06-04 04:40:41] -rw------- 1 boinc boinc 197660914 Jun  4 04:39 HITS.pool.root.1
[2025-06-04 04:40:41] -rw------- 1 boinc boinc   1218560 Jun  4 04:40 result.tar.gz
04:40:42 (2955331): run_atlas exited; CPU time 37459.306572
04:40:42 (2955331): called boinc_finish(0)

</stderr_txt>
]]>

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