Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:46:00 (9569): wrapper (7.7.26015): starting
16:46:00 (9569): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 16:46:00] Arguments: --nthreads 8
[2025-06-04 16:46:00] Threads: 8
[2025-06-04 16:46:00] Checking for CVMFS
[2025-06-04 16:46:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:46:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:46:01] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:46:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:46:02] 2.11.2.0 20081 33360 95212 146782 0 59 15869900 25165824 3134 130560 0 16965861 99.814 18759302 1954 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 16:46:02] CVMFS is ok
[2025-06-04 16:46:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:46:02] Checking for apptainer binary...
[2025-06-04 16:46:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:46:02] Running /usr/bin/apptainer --version
[2025-06-04 16:46:02] apptainer version 1.3.2-1.el7
[2025-06-04 16:46:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:16:25] cg-vwn273.simple-grid.lan
[2025-06-04 17:16:25] apptainer works
[2025-06-04 17:16:25] Set ATHENA_PROC_NUMBER=8
[2025-06-04 17:16:25] Set ATHENA_CORE_NUMBER=8
[2025-06-04 17:16:25] Starting ATLAS job with PandaID=6678213921
[2025-06-04 17:16:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:22:22]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:22:22] 2025-06-04 19:14:42,275 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:22:22] 2025-06-04 19:14:42,275 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:22:22] 2025-06-04 19:14:42,275 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:22:22] 2025-06-04 19:14:42,280 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:22:22] 2025-06-04 19:14:42,280 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 21:22:22] 2025-06-04 19:14:42,282 | INFO     | sum of deviations: 45487013963.50001
[2025-06-04 21:22:22] 2025-06-04 19:14:42,283 | INFO     | mean x: 1749057603.5
[2025-06-04 21:22:22] 2025-06-04 19:14:42,283 | INFO     | mean y: 2451147.2117117117
[2025-06-04 21:22:22] 2025-06-04 19:14:42,283 | INFO     | -- intersect: -23448637358.34454
[2025-06-04 21:22:22] 2025-06-04 19:14:42,283 | INFO     | intersect: -23448637358.34454
[2025-06-04 21:22:22] 2025-06-04 19:14:42,283 | INFO     | chi2: 6.642032190307633
[2025-06-04 21:22:22] 2025-06-04 19:14:42,284 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,286 | INFO     | sum of deviations: 59166277597.00001
[2025-06-04 21:22:22] 2025-06-04 19:14:42,286 | INFO     | mean x: 1749057451.0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,286 | INFO     | mean y: 2460273.658986175
[2025-06-04 21:22:22] 2025-06-04 19:14:42,286 | INFO     | -- intersect: -32658572930.0984
[2025-06-04 21:22:22] 2025-06-04 19:14:42,286 | INFO     | intersect: -32658572930.0984
[2025-06-04 21:22:22] 2025-06-04 19:14:42,286 | INFO     | chi2: 5.934183616500374
[2025-06-04 21:22:22] 2025-06-04 19:14:42,287 | INFO     | current chi2=5.934183616500374 (change=10.657108450034086 %)
[2025-06-04 21:22:22] 2025-06-04 19:14:42,287 | INFO     | right removable region: 216
[2025-06-04 21:22:22] 2025-06-04 19:14:42,287 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,289 | INFO     | sum of deviations: -30588998085.0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,289 | INFO     | mean x: 1749057756.0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,289 | INFO     | mean y: 2502858.0875576036
[2025-06-04 21:22:22] 2025-06-04 19:14:42,289 | INFO     | -- intersect: 16888277946.82959
[2025-06-04 21:22:22] 2025-06-04 19:14:42,289 | INFO     | intersect: 16888277946.82959
[2025-06-04 21:22:22] 2025-06-04 19:14:42,290 | INFO     | chi2: 1.918818552646977
[2025-06-04 21:22:22] 2025-06-04 19:14:42,290 | INFO     | current chi2=1.918818552646977 (change=71.11097179795352 %)
[2025-06-04 21:22:22] 2025-06-04 19:14:42,290 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,292 | INFO     | sum of deviations: -57738036834.0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,292 | INFO     | mean x: 1749057908.5
[2025-06-04 21:22:22] 2025-06-04 19:14:42,292 | INFO     | mean y: 2522019.1603773586
[2025-06-04 21:22:22] 2025-06-04 19:14:42,292 | INFO     | -- intersect: 34183922927.992702
[2025-06-04 21:22:22] 2025-06-04 19:14:42,292 | INFO     | intersect: 34183922927.992702
[2025-06-04 21:22:22] 2025-06-04 19:14:42,293 | INFO     | chi2: 0.9930609321505705
[2025-06-04 21:22:22] 2025-06-04 19:14:42,293 | INFO     | current chi2=0.9930609321505705 (change=48.24623043274936 %)
[2025-06-04 21:22:22] 2025-06-04 19:14:42,293 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,295 | INFO     | sum of deviations: -54134449207.0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,295 | INFO     | mean x: 1749058061.0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,295 | INFO     | mean y: 2519296.565217391
[2025-06-04 21:22:22] 2025-06-04 19:14:42,295 | INFO     | -- intersect: 34429475258.865654
[2025-06-04 21:22:22] 2025-06-04 19:14:42,295 | INFO     | intersect: 34429475258.865654
[2025-06-04 21:22:22] 2025-06-04 19:14:42,296 | INFO     | chi2: 0.9839625478851464
[2025-06-04 21:22:22] 2025-06-04 19:14:42,296 | INFO     | current chi2=0.9839625478851464 (change=0.9161959725593724 %)
[2025-06-04 21:22:22] 2025-06-04 19:14:42,296 | INFO     | left removable region: 30
[2025-06-04 21:22:22] 2025-06-04 19:14:42,296 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 21:22:22] 2025-06-04 19:14:42,298 | INFO     | sum of deviations: -17917478637.999996
[2025-06-04 21:22:22] 2025-06-04 19:14:42,298 | INFO     | mean x: 1749058335.5
[2025-06-04 21:22:22] 2025-06-04 19:14:42,298 | INFO     | mean y: 2512405.5161290322
[2025-06-04 21:22:22] 2025-06-04 19:14:42,298 | INFO     | -- intersect: 15708906372.581776
[2025-06-04 21:22:22] 2025-06-04 19:14:42,298 | INFO     | intersect: 15708906372.581776
[2025-06-04 21:22:22] 2025-06-04 19:14:42,298 | INFO     | chi2: 0.1300273781169619
[2025-06-04 21:22:22] 2025-06-04 19:14:42,299 | INFO     | -- intersect: 15708906372.581776
[2025-06-04 21:22:22] 2025-06-04 19:14:42,299 | INFO     | current memory leak: -8.98 B/s (using 186 data points, chi2=0.13)
[2025-06-04 21:22:22] 2025-06-04 19:14:42,300 | INFO     | ..............................
[2025-06-04 21:22:22] 2025-06-04 19:14:42,300 | INFO     | . Timing measurements:
[2025-06-04 21:22:22] 2025-06-04 19:14:42,300 | INFO     | . get job = 0 s
[2025-06-04 21:22:22] 2025-06-04 19:14:42,300 | INFO     | . initial setup = 9 s
[2025-06-04 21:22:22] 2025-06-04 19:14:42,300 | INFO     | . payload setup = 160 s
[2025-06-04 21:22:22] 2025-06-04 19:14:42,300 | INFO     | . stage-in = 0 s
[2025-06-04 21:22:22] 2025-06-04 19:14:42,300 | INFO     | . payload execution = 13673 s
[2025-06-04 21:22:22] 2025-06-04 19:14:42,300 | INFO     | . stage-out = 2 s
[2025-06-04 21:22:22] 2025-06-04 19:14:42,300 | INFO     | . log creation = 0 s
[2025-06-04 21:22:22] 2025-06-04 19:14:42,300 | INFO     | ..............................
[2025-06-04 21:22:22] 2025-06-04 19:14:42,805 | INFO     | 
[2025-06-04 21:22:22] 2025-06-04 19:14:42,806 | INFO     | job summary report
[2025-06-04 21:22:22] 2025-06-04 19:14:42,806 | INFO     | --------------------------------------------------
[2025-06-04 21:22:22] 2025-06-04 19:14:42,806 | INFO     | PanDA job id: 6678213921
[2025-06-04 21:22:22] 2025-06-04 19:14:42,806 | INFO     | task id: 45006595
[2025-06-04 21:22:22] 2025-06-04 19:14:42,806 | INFO     | errors: (none)
[2025-06-04 21:22:22] 2025-06-04 19:14:42,806 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:22:22] 2025-06-04 19:14:42,806 | INFO     | pilot state: finished 
[2025-06-04 21:22:22] 2025-06-04 19:14:42,806 | INFO     | transexitcode: 0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,806 | INFO     | exeerrorcode: 0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,807 | INFO     | exeerrordiag: 
[2025-06-04 21:22:22] 2025-06-04 19:14:42,807 | INFO     | exitcode: 0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,807 | INFO     | exitmsg: OK
[2025-06-04 21:22:22] 2025-06-04 19:14:42,807 | INFO     | cpuconsumptiontime: 51328 s
[2025-06-04 21:22:22] 2025-06-04 19:14:42,807 | INFO     | nevents: 400
[2025-06-04 21:22:22] 2025-06-04 19:14:42,807 | INFO     | neventsw: 0
[2025-06-04 21:22:22] 2025-06-04 19:14:42,807 | INFO     | pid: 6598
[2025-06-04 21:22:22] 2025-06-04 19:14:42,807 | INFO     | pgrp: 6598
[2025-06-04 21:22:22] 2025-06-04 19:14:42,807 | INFO     | corecount: 8
[2025-06-04 21:22:22] 2025-06-04 19:14:42,807 | INFO     | event service: False
[2025-06-04 21:22:22] 2025-06-04 19:14:42,807 | INFO     | sizes: {0: 2397115, 1: 2397370, 12: 2397370, 23: 2397398, 34: 2397426, 44: 2397454, 55: 2397610, 66: 2397638, 77: 2397666, 82: 2397928, 87: 2397984, 13838: 2427867
[2025-06-04 21:22:22] 2025-06-04 19:14:42,808 | INFO     | --------------------------------------------------
[2025-06-04 21:22:22] 2025-06-04 19:14:42,808 | INFO     | 
[2025-06-04 21:22:22] 2025-06-04 19:14:42,808 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-06-04 21:22:22] 2025-06-04 19:14:43,168 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,168 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,168 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,169 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,169 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,169 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,169 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,169 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,169 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,169 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,170 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:22:22] 2025-06-04 19:14:43,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,170 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:22:22] 2025-06-04 19:14:43,171 | INFO     | job 6678213921 has completed (purged errors)
[2025-06-04 21:22:22] 2025-06-04 19:14:43,171 | INFO     | overall cleanup function is called
[2025-06-04 21:22:22] 2025-06-04 19:14:44,180 | INFO     | --- collectZombieJob: --- 10, [6598]
[2025-06-04 21:22:22] 2025-06-04 19:14:44,181 | INFO     | zombie collector waiting for pid 6598
[2025-06-04 21:22:22] 2025-06-04 19:14:44,181 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:22:22] 2025-06-04 19:14:44,181 | INFO     | collected zombie processes
[2025-06-04 21:22:22] 2025-06-04 19:14:44,181 | INFO     | will attempt to kill all subprocesses of pid=6598
[2025-06-04 21:22:22] 2025-06-04 19:14:44,304 | INFO     | process IDs to be killed: [6598] (in reverse order)
[2025-06-04 21:22:22] 2025-06-04 19:14:44,584 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:22:22] 2025-06-04 19:14:44,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:22:22] 2025-06-04 19:14:44,588 | INFO     | did not find any defunct processes belonging to 6598
[2025-06-04 21:22:22] 2025-06-04 19:14:44,592 | INFO     | did not find any defunct processes belonging to 6598
[2025-06-04 21:22:22] 2025-06-04 19:14:44,592 | INFO     | ready for new job
[2025-06-04 21:22:22] 2025-06-04 19:14:44,592 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:22:22] 2025-06-04 19:14:44,596 | INFO     | **************************************
[2025-06-04 21:22:22] 2025-06-04 19:14:44,596 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:22:22] 2025-06-04 19:14:44,596 | INFO     | **************************************
[2025-06-04 21:22:22] 2025-06-04 19:14:44,596 | INFO     | 
[2025-06-04 21:22:22] 2025-06-04 19:14:44,597 | INFO     | pilot is running in a VM
[2025-06-04 21:22:22] 2025-06-04 19:14:44,597 | INFO     | architecture information:
[2025-06-04 21:22:22] 2025-06-04 19:14:44,610 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:22:22] 2025-06-04 19:14:44,774 | INFO     | cat /etc/os-release:
[2025-06-04 21:22:22] NAME="CentOS Linux"
[2025-06-04 21:22:22] VERSION="7 (Core)"
[2025-06-04 21:22:22] ID="centos"
[2025-06-04 21:22:22] ID_LIKE="rhel fedora"
[2025-06-04 21:22:22] VERSION_ID="7"
[2025-06-04 21:22:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:22:22] ANSI_COLOR="0;31"
[2025-06-04 21:22:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:22:22] HOME_URL="https://www.centos.org/"
[2025-06-04 21:22:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:22:22] 
[2025-06-04 21:22:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:22:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:22:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:22:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:22:22] 
[2025-06-04 21:22:22] 2025-06-04 19:14:44,774 | INFO     | **************************************
[2025-06-04 21:22:22] 2025-06-04 19:14:45,279 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-06-04 21:22:22] 2025-06-04 19:14:45,450 | INFO     | sufficient remaining disk space (496897097728 B)
[2025-06-04 21:22:22] 2025-06-04 19:14:45,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:22:22] 2025-06-04 19:14:45,451 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:22:22] 2025-06-04 19:14:45,451 | INFO     | update_server=False
[2025-06-04 21:22:22] 2025-06-04 19:14:45,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:22:22] 2025-06-04 19:14:45,451 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 21:22:22] 2025-06-04 19:14:45,452 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:22:22] 2025-06-04 19:14:45,452 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:22:22] 2025-06-04 19:14:45,452 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:22:22] 2025-06-04 19:14:45,507 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:22:22] 2025-06-04 19:14:45,665 | INFO     | all data control threads have been joined
[2025-06-04 21:22:22] 2025-06-04 19:14:45,858 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 21:22:22] 2025-06-04 19:14:45,859 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 21:22:22] 2025-06-04 19:14:45,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:22:22] 2025-06-04 19:14:45,859 | INFO     | will abort loop
[2025-06-04 21:22:22] 2025-06-04 19:14:46,456 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:46,488 | INFO     | all payload control threads have been joined
[2025-06-04 21:22:22] 2025-06-04 19:14:46,513 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:46,534 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:46,671 | INFO     | [data] control thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:46,785 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:46,799 | INFO     | all job control threads have been joined
[2025-06-04 21:22:22] 2025-06-04 19:14:46,864 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:46,914 | INFO     | [job] validate thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:47,292 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:47,494 | INFO     | [payload] control thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:47,514 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:47,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:22:22] 2025-06-04 19:14:47,561 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:47,804 | INFO     | [job] control thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:47,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:47,959 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:48,555 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:48,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:22:22] 2025-06-04 19:14:52,646 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:22:22] 2025-06-04 19:14:52,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139821326624576)>', '<ExcThread(monitor, started 139820873524992)>']
[2025-06-04 21:22:22] 2025-06-04 19:14:53,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:22:22] 2025-06-04 19:14:53,500 | INFO     | [monitor] control thread has ended
[2025-06-04 21:22:22] 2025-06-04 19:14:57,856 | INFO     | all workflow threads have been joined
[2025-06-04 21:22:22] 2025-06-04 19:14:57,857 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:22:22] 2025-06-04 19:14:57,857 | INFO     | traces error code: 0
[2025-06-04 21:22:22] 2025-06-04 19:14:57,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:22:22] 2025-06-04 19:14:58,135 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:22:22] 2025-06-04 19:14:58,163 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:22:22] 2025-06-04 19:14:58,194 [wrapper] pilotpid: 30379
[2025-06-04 21:22:22] 2025-06-04 19:14:58,251 [wrapper] Pilot exit status: 0
[2025-06-04 21:22:22] 2025-06-04 19:14:58,596 [wrapper] pandaids: 6678213921
[2025-06-04 21:22:22] 2025-06-04 19:14:59,395 [wrapper] cleanup supervisor_pilot 16143 30380
[2025-06-04 21:22:22] 2025-06-04 19:14:59,439 [wrapper] Test setup, not cleaning
[2025-06-04 21:22:22] 2025-06-04 19:14:59,528 [wrapper] apfmon messages muted
[2025-06-04 21:22:22] 2025-06-04 19:14:59,644 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:22:22] 2025-06-04 19:14:59,743 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:22:22]  *** Error codes and diagnostics ***
[2025-06-04 21:22:22]     "exeErrorCode": 0,
[2025-06-04 21:22:22]     "exeErrorDiag": "",
[2025-06-04 21:22:22]     "pilotErrorCode": 0,
[2025-06-04 21:22:22]     "pilotErrorDiag": "",
[2025-06-04 21:22:22]  *** Listing of results directory ***
[2025-06-04 21:22:22] total 397924
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc      5111 Jun  4 02:20 queuedata.json
[2025-06-04 21:22:22] -rwx------. 1 boinc boinc     37140 Jun  4 02:22 runpilot2-wrapper.sh
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc       100 Jun  4 16:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:22:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 16:45 run_atlas
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc       105 Jun  4 16:45 job.xml
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc      6392 Jun  4 16:46 init_data.xml
[2025-06-04 21:22:22] -rw-r--r--. 2 boinc boinc 216053050 Jun  4 16:46 EVNT.45006593._001956.pool.root.1
[2025-06-04 21:22:22] -rw-r--r--. 2 boinc boinc     15093 Jun  4 16:46 start_atlas.sh
[2025-06-04 21:22:22] drwxrwx--x. 2 boinc boinc        68 Jun  4 16:46 shared
[2025-06-04 21:22:22] -rw-r--r--. 2 boinc boinc    508885 Jun  4 16:46 input.tar.gz
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc         0 Jun  4 16:46 boinc_lockfile
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc      2524 Jun  4 17:16 pandaJob.out
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc    987207 Jun  4 17:19 agis_schedconf.cvmfs.json
[2025-06-04 21:22:22] drwx------. 4 boinc boinc      4096 Jun  4 17:19 pilot3
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc 184450093 Jun  4 21:11 HITS.45006595._048761.pool.root.1
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc       531 Jun  4 21:11 boinc_task_state.xml
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc      1013 Jun  4 21:13 memory_monitor_summary.json
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc   1598969 Jun  4 21:13 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc    376126 Jun  4 21:13 log.45006595._048761.job.log.tgz.1
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc        95 Jun  4 21:13 pilot_heartbeat.json
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc      7689 Jun  4 21:14 heartbeat.json
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc      4726 Jun  4 21:14 pilotlog.txt
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc   1199555 Jun  4 21:14 log.45006595._048761.job.log.1
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc       357 Jun  4 21:15 output.list
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc       620 Jun  4 21:15 runtime_log
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc   1597440 Jun  4 21:15 result.tar.gz
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc      8673 Jun  4 21:15 runtime_log.err
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc       657 Jun  4 21:15 QrrNDmd4qg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhbmKDmc0m4yn.diag
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc        28 Jun  4 21:22 wrapper_checkpoint.txt
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc      8192 Jun  4 21:22 boinc_mmap_file
[2025-06-04 21:22:22] -rw-r--r--. 1 boinc boinc     20522 Jun  4 21:22 stderr.txt
[2025-06-04 21:22:22] HITS file was successfully produced:
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc 184450093 Jun  4 21:11 shared/HITS.pool.root.1
[2025-06-04 21:22:22]  *** Contents of shared directory: ***
[2025-06-04 21:22:22] total 393196
[2025-06-04 21:22:22] -rw-r--r--. 2 boinc boinc 216053050 Jun  4 16:46 ATLAS.root_0
[2025-06-04 21:22:22] -rw-r--r--. 2 boinc boinc     15093 Jun  4 16:46 start_atlas.sh
[2025-06-04 21:22:22] -rw-r--r--. 2 boinc boinc    508885 Jun  4 16:46 input.tar.gz
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc 184450093 Jun  4 21:11 HITS.pool.root.1
[2025-06-04 21:22:22] -rw-------. 1 boinc boinc   1597440 Jun  4 21:15 result.tar.gz
21:22:24 (9569): run_atlas exited; CPU time 51519.954114
21:22:24 (9569): called boinc_finish(0)

</stderr_txt>
]]>

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