Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:26:31 (2975227): wrapper (7.7.26015): starting
18:26:31 (2975227): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 18:26:31] Arguments: --nthreads 4
[2025-06-05 18:26:31] Threads: 4
[2025-06-05 18:26:31] Checking for CVMFS
[2025-06-05 18:26:31] No cvmfs_config command found, will try listing directly
[2025-06-05 18:26:31] CVMFS is ok
[2025-06-05 18:26:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 18:26:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 18:26:31] Further information can be found at the LHC@home message board.
[2025-06-05 18:26:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 18:26:31] Checking for apptainer binary...
[2025-06-05 18:26:31] which: no apptainer in ((null))
[2025-06-05 18:26:31] apptainer is not installed, using version from CVMFS
[2025-06-05 18:26:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 18:26:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-06-05 18:26:31] apptainer works
[2025-06-05 18:26:31] Set ATHENA_PROC_NUMBER=4
[2025-06-05 18:26:31] Set ATHENA_CORE_NUMBER=4
[2025-06-05 18:26:31] Starting ATLAS job with PandaID=6678074863
[2025-06-05 18:26:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 21:29:02]  *** The last 200 lines of the pilot log: ***
[2025-06-05 21:29:02] 2025-06-05 19:28:08,223 | INFO     | extracted standard info from prmon json
[2025-06-05 21:29:02] 2025-06-05 19:28:08,223 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 21:29:02] 2025-06-05 19:28:08,223 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 21:29:02] 2025-06-05 19:28:08,224 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 21:29:02] 2025-06-05 19:28:08,224 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 21:29:02] 2025-06-05 19:28:08,233 | INFO     | fitting pss+swap vs Time
[2025-06-05 21:29:02] 2025-06-05 19:28:08,234 | INFO     | sum of square deviations: 1748737904.5
[2025-06-05 21:29:02] 2025-06-05 19:28:08,235 | INFO     | sum of deviations: 17252688468.499996
[2025-06-05 21:29:02] 2025-06-05 19:28:08,235 | INFO     | mean x: 1749146224.5
[2025-06-05 21:29:02] 2025-06-05 19:28:08,235 | INFO     | mean y: 2320087.4101123596
[2025-06-05 21:29:02] 2025-06-05 19:28:08,235 | INFO     | -- intersect: -17254396782.222687
[2025-06-05 21:29:02] 2025-06-05 19:28:08,235 | INFO     | intersect: -17254396782.222687
[2025-06-05 21:29:02] 2025-06-05 19:28:08,236 | INFO     | chi2: 1.6827240943693311
[2025-06-05 21:29:02] 2025-06-05 19:28:08,236 | INFO     | sum of square deviations: 1605470102.0
[2025-06-05 21:29:02] 2025-06-05 19:28:08,237 | INFO     | sum of deviations: 16755798419.999994
[2025-06-05 21:29:02] 2025-06-05 19:28:08,237 | INFO     | mean x: 1749146072.0
[2025-06-05 21:29:02] 2025-06-05 19:28:08,238 | INFO     | mean y: 2319558.358381503
[2025-06-05 21:29:02] 2025-06-05 19:28:08,238 | INFO     | -- intersect: -18252980838.11502
[2025-06-05 21:29:02] 2025-06-05 19:28:08,238 | INFO     | intersect: -18252980838.11502
[2025-06-05 21:29:02] 2025-06-05 19:28:08,238 | INFO     | chi2: 1.6842547694782162
[2025-06-05 21:29:02] 2025-06-05 19:28:08,238 | INFO     | current chi2=1.6842547694782162 (change=-0.09096411669666686 %)
[2025-06-05 21:29:02] 2025-06-05 19:28:08,238 | INFO     | right removable region: 172
[2025-06-05 21:29:02] 2025-06-05 19:28:08,239 | INFO     | sum of square deviations: 1605470102.0
[2025-06-05 21:29:02] 2025-06-05 19:28:08,240 | INFO     | sum of deviations: -11814164629.999996
[2025-06-05 21:29:02] 2025-06-05 19:28:08,240 | INFO     | mean x: 1749146377.0
[2025-06-05 21:29:02] 2025-06-05 19:28:08,240 | INFO     | mean y: 2350697.352601156
[2025-06-05 21:29:02] 2025-06-05 19:28:08,240 | INFO     | -- intersect: 12873785197.505032
[2025-06-05 21:29:02] 2025-06-05 19:28:08,240 | INFO     | intersect: 12873785197.505032
[2025-06-05 21:29:02] 2025-06-05 19:28:08,241 | INFO     | chi2: 0.01868810800115815
[2025-06-05 21:29:02] 2025-06-05 19:28:08,241 | INFO     | current chi2=0.01868810800115815 (change=98.88941341817763 %)
[2025-06-05 21:29:02] 2025-06-05 19:28:08,241 | INFO     | sum of square deviations: 1470248962.0
[2025-06-05 21:29:02] 2025-06-05 19:28:08,242 | INFO     | sum of deviations: -11634292374.499996
[2025-06-05 21:29:02] 2025-06-05 19:28:08,243 | INFO     | mean x: 1749146529.5
[2025-06-05 21:29:02] 2025-06-05 19:28:08,243 | INFO     | mean y: 2350488.744047619
[2025-06-05 21:29:02] 2025-06-05 19:28:08,243 | INFO     | -- intersect: 13843599594.176153
[2025-06-05 21:29:02] 2025-06-05 19:28:08,243 | INFO     | intersect: 13843599594.176153
[2025-06-05 21:29:02] 2025-06-05 19:28:08,243 | INFO     | chi2: 0.017619990338399994
[2025-06-05 21:29:02] 2025-06-05 19:28:08,243 | INFO     | current chi2=0.017619990338399994 (change=5.7154938460969955 %)
[2025-06-05 21:29:02] 2025-06-05 19:28:08,244 | INFO     | left removable region: 20
[2025-06-05 21:29:02] 2025-06-05 19:28:08,244 | INFO     | sum of square deviations: 1088905998.0
[2025-06-05 21:29:02] 2025-06-05 19:28:08,245 | INFO     | sum of deviations: -8958347760.000002
[2025-06-05 21:29:02] 2025-06-05 19:28:08,245 | INFO     | mean x: 1749146651.5
[2025-06-05 21:29:02] 2025-06-05 19:28:08,245 | INFO     | mean y: 2347856.3157894737
[2025-06-05 21:29:02] 2025-06-05 19:28:08,245 | INFO     | -- intersect: 14392445822.675352
[2025-06-05 21:29:02] 2025-06-05 19:28:08,245 | INFO     | intersect: 14392445822.675352
[2025-06-05 21:29:02] 2025-06-05 19:28:08,246 | INFO     | chi2: 0.016468834576046355
[2025-06-05 21:29:02] 2025-06-05 19:28:08,246 | INFO     | -- intersect: 14392445822.675352
[2025-06-05 21:29:02] 2025-06-05 19:28:08,246 | INFO     | current memory leak: -8.23 B/s (using 152 data points, chi2=0.02)
[2025-06-05 21:29:02] 2025-06-05 19:28:08,247 | INFO     | ..............................
[2025-06-05 21:29:02] 2025-06-05 19:28:08,247 | INFO     | . Timing measurements:
[2025-06-05 21:29:02] 2025-06-05 19:28:08,248 | INFO     | sufficient remaining disk space (1663465160704 B)
[2025-06-05 21:29:02] 2025-06-05 19:28:08,248 | INFO     | . get job = 0 s
[2025-06-05 21:29:02] 2025-06-05 19:28:08,249 | INFO     | . initial setup = 1 s
[2025-06-05 21:29:02] 2025-06-05 19:28:08,249 | INFO     | . payload setup = 6 s
[2025-06-05 21:29:02] 2025-06-05 19:28:08,249 | INFO     | . stage-in = 0 s
[2025-06-05 21:29:02] 2025-06-05 19:28:08,249 | INFO     | . payload execution = 10854 s
[2025-06-05 21:29:02] 2025-06-05 19:28:08,249 | INFO     | . stage-out = 1 s
[2025-06-05 21:29:02] 2025-06-05 19:28:08,249 | INFO     | . log creation = 0 s
[2025-06-05 21:29:02] 2025-06-05 19:28:08,249 | INFO     | ..............................
[2025-06-05 21:29:02] 2025-06-05 19:28:08,250 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-06-05 21:29:02] 2025-06-05 19:28:08,372 | INFO     | 
[2025-06-05 21:29:02] 2025-06-05 19:28:08,373 | INFO     | job summary report
[2025-06-05 21:29:02] 2025-06-05 19:28:08,373 | INFO     | --------------------------------------------------
[2025-06-05 21:29:02] 2025-06-05 19:28:08,373 | INFO     | PanDA job id: 6678074863
[2025-06-05 21:29:02] 2025-06-05 19:28:08,373 | INFO     | task id: 45006595
[2025-06-05 21:29:02] 2025-06-05 19:28:08,373 | INFO     | errors: (none)
[2025-06-05 21:29:02] 2025-06-05 19:28:08,373 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 21:29:02] 2025-06-05 19:28:08,374 | INFO     | pilot state: finished 
[2025-06-05 21:29:02] 2025-06-05 19:28:08,374 | INFO     | transexitcode: 0
[2025-06-05 21:29:02] 2025-06-05 19:28:08,374 | INFO     | exeerrorcode: 0
[2025-06-05 21:29:02] 2025-06-05 19:28:08,374 | INFO     | exeerrordiag: 
[2025-06-05 21:29:02] 2025-06-05 19:28:08,374 | INFO     | exitcode: 0
[2025-06-05 21:29:02] 2025-06-05 19:28:08,374 | INFO     | exitmsg: OK
[2025-06-05 21:29:02] 2025-06-05 19:28:08,374 | INFO     | cpuconsumptiontime: 41476 s
[2025-06-05 21:29:02] 2025-06-05 19:28:08,375 | INFO     | nevents: 400
[2025-06-05 21:29:02] 2025-06-05 19:28:08,375 | INFO     | neventsw: 0
[2025-06-05 21:29:02] 2025-06-05 19:28:08,375 | INFO     | pid: 2987792
[2025-06-05 21:29:02] 2025-06-05 19:28:08,375 | INFO     | pgrp: 2987792
[2025-06-05 21:29:02] 2025-06-05 19:28:08,375 | INFO     | corecount: 4
[2025-06-05 21:29:02] 2025-06-05 19:28:08,375 | INFO     | event service: False
[2025-06-05 21:29:02] 2025-06-05 19:28:08,375 | INFO     | sizes: {0: 2396514, 1: 2397381, 5: 2397587, 12: 2397643, 10864: 2426542, 10865: 2435505, 10868: 2435689, 10872: 2435859}
[2025-06-05 21:29:02] 2025-06-05 19:28:08,375 | INFO     | --------------------------------------------------
[2025-06-05 21:29:02] 2025-06-05 19:28:08,376 | INFO     | 
[2025-06-05 21:29:02] 2025-06-05 19:28:08,376 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-05 21:29:02] 2025-06-05 19:28:08,376 | INFO     | size of work directory /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6678074863: 2815943 B (within 2537553920 B limit)
[2025-06-05 21:29:02] 2025-06-05 19:28:08,377 | INFO     | pfn file=/scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6678074863/HITS.45006595._046150.pool.root.1 does not exist (skip from workdir size calculation)
[2025-06-05 21:29:02] 2025-06-05 19:28:08,377 | INFO     | total size of present files: 0 B (workdir size: 2815943 B)
[2025-06-05 21:29:02] 2025-06-05 19:28:08,377 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6678074863/HITS.45006595._046150.pool.root.1 since it does not exist
[2025-06-05 21:29:02] 2025-06-05 19:28:08,398 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,399 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,399 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,399 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,401 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,401 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,401 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,401 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,401 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 21:29:02] 2025-06-05 19:28:08,402 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,402 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 21:29:02] 2025-06-05 19:28:08,402 | INFO     | job 6678074863 has completed (purged errors)
[2025-06-05 21:29:02] 2025-06-05 19:28:08,402 | INFO     | overall cleanup function is called
[2025-06-05 21:29:02] 2025-06-05 19:28:08,707 | INFO     | number of running child processes to parent process 2987792: 1
[2025-06-05 21:29:02] 2025-06-05 19:28:08,708 | INFO     | maximum number of monitored processes: 6
[2025-06-05 21:29:02] 2025-06-05 19:28:08,708 | INFO     | aborting job monitoring since job object (job id=6678074863) has expired
[2025-06-05 21:29:02] 2025-06-05 19:28:09,412 | INFO     | --- collectZombieJob: --- 10, [2987792]
[2025-06-05 21:29:02] 2025-06-05 19:28:09,413 | INFO     | zombie collector waiting for pid 2987792
[2025-06-05 21:29:02] 2025-06-05 19:28:09,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 21:29:02] 2025-06-05 19:28:09,413 | INFO     | collected zombie processes
[2025-06-05 21:29:02] 2025-06-05 19:28:09,413 | INFO     | will attempt to kill all subprocesses of pid=2987792
[2025-06-05 21:29:02] 2025-06-05 19:28:09,758 | INFO     | process IDs to be killed: [2987792] (in reverse order)
[2025-06-05 21:29:02] 2025-06-05 19:28:09,838 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 21:29:02] 2025-06-05 19:28:09,839 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 21:29:02] 2025-06-05 19:28:09,847 | INFO     | did not find any defunct processes belonging to 2987792
[2025-06-05 21:29:02] 2025-06-05 19:28:09,854 | INFO     | did not find any defunct processes belonging to 2987792
[2025-06-05 21:29:02] 2025-06-05 19:28:09,855 | INFO     | ready for new job
[2025-06-05 21:29:02] 2025-06-05 19:28:09,855 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 21:29:02] 2025-06-05 19:28:09,857 | INFO     | **************************************
[2025-06-05 21:29:02] 2025-06-05 19:28:09,857 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 21:29:02] 2025-06-05 19:28:09,857 | INFO     | **************************************
[2025-06-05 21:29:02] 2025-06-05 19:28:09,857 | INFO     | 
[2025-06-05 21:29:02] 2025-06-05 19:28:09,859 | INFO     | architecture information:
[2025-06-05 21:29:02] 2025-06-05 19:28:09,860 | INFO     | executing command: cat /etc/os-release
[2025-06-05 21:29:02] 2025-06-05 19:28:09,872 | INFO     | cat /etc/os-release:
[2025-06-05 21:29:02] NAME="CentOS Linux"
[2025-06-05 21:29:02] VERSION="7 (Core)"
[2025-06-05 21:29:02] ID="centos"
[2025-06-05 21:29:02] ID_LIKE="rhel fedora"
[2025-06-05 21:29:02] VERSION_ID="7"
[2025-06-05 21:29:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 21:29:02] ANSI_COLOR="0;31"
[2025-06-05 21:29:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 21:29:02] HOME_URL="https://www.centos.org/"
[2025-06-05 21:29:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 21:29:02] 
[2025-06-05 21:29:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 21:29:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 21:29:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 21:29:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 21:29:02] 
[2025-06-05 21:29:02] 2025-06-05 19:28:09,872 | INFO     | **************************************
[2025-06-05 21:29:02] 2025-06-05 19:28:10,374 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-05 21:29:02] 2025-06-05 19:28:10,387 | INFO     | sufficient remaining disk space (1663469355008 B)
[2025-06-05 21:29:02] 2025-06-05 19:28:10,387 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 21:29:02] 2025-06-05 19:28:10,388 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 21:29:02] 2025-06-05 19:28:10,388 | INFO     | update_server=False
[2025-06-05 21:29:02] 2025-06-05 19:28:10,388 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 21:29:02] 2025-06-05 19:28:10,388 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 21:29:02] 2025-06-05 19:28:10,388 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:29:02] 2025-06-05 19:28:10,388 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 21:29:02] 2025-06-05 19:28:10,389 | INFO     | aborting loop
[2025-06-05 21:29:02] 2025-06-05 19:28:10,847 | INFO     | all data control threads have been joined
[2025-06-05 21:29:02] 2025-06-05 19:28:10,983 | INFO     | all payload control threads have been joined
[2025-06-05 21:29:02] 2025-06-05 19:28:11,142 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 21:29:02] 2025-06-05 19:28:11,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 21:29:02] 2025-06-05 19:28:11,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 21:29:02] 2025-06-05 19:28:11,389 | INFO     | [job] retrieve thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:11,394 | INFO     | [job] job monitor thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:11,853 | INFO     | [data] control thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:11,869 | INFO     | all job control threads have been joined
[2025-06-05 21:29:02] 2025-06-05 19:28:11,955 | INFO     | [payload] failed_post thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:11,987 | INFO     | [payload] control thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:12,211 | INFO     | [job] validate thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:12,338 | INFO     | [data] copytool_in thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:12,394 | INFO     | [data] copytool_out thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:12,462 | INFO     | [payload] validate_post thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:12,714 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:12,743 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:12,758 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:12,874 | INFO     | [job] control thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:13,378 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 21:29:02] 2025-06-05 19:28:14,384 | INFO     | [job] queue monitor thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:14,393 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:21,330 | INFO     | job.realtimelogging is not enabled
[2025-06-05 21:29:02] 2025-06-05 19:28:22,335 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 21:29:02] 2025-06-05 19:28:23,738 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22519864555328)>', '<ExcThread(monitor, started 22519624988416)>']
[2025-06-05 21:29:02] 2025-06-05 19:28:24,208 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 21:29:02] 2025-06-05 19:28:24,208 | INFO     | [monitor] control thread has ended
[2025-06-05 21:29:02] 2025-06-05 19:28:28,763 | INFO     | all workflow threads have been joined
[2025-06-05 21:29:02] 2025-06-05 19:28:28,764 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 21:29:02] 2025-06-05 19:28:28,764 | INFO     | traces error code: 0
[2025-06-05 21:29:02] 2025-06-05 19:28:28,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 21:29:02] 2025-06-05 19:28:28,948 [wrapper] ==== pilot stdout END ====
[2025-06-05 21:29:02] 2025-06-05 19:28:28,950 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 21:29:02] 2025-06-05 19:28:28,953 [wrapper] pilotpid: 2978828
[2025-06-05 21:29:02] 2025-06-05 19:28:28,955 [wrapper] Pilot exit status: 0
[2025-06-05 21:29:02] 2025-06-05 19:28:28,964 [wrapper] pandaids: 6678074863
[2025-06-05 21:29:02] 2025-06-05 19:28:29,022 [wrapper] cleanup supervisor_pilot 3168637 2978829
[2025-06-05 21:29:02] 2025-06-05 19:28:29,025 [wrapper] Test setup, not cleaning
[2025-06-05 21:29:02] 2025-06-05 19:28:29,027 [wrapper] apfmon messages muted
[2025-06-05 21:29:02] 2025-06-05 19:28:29,030 [wrapper] ==== wrapper stdout END ====
[2025-06-05 21:29:02] 2025-06-05 19:28:29,033 [wrapper] ==== wrapper stderr END ====
[2025-06-05 21:29:02]  *** Error codes and diagnostics ***
[2025-06-05 21:29:02]     "exeErrorCode": 0,
[2025-06-05 21:29:02]     "exeErrorDiag": "",
[2025-06-05 21:29:02]     "pilotErrorCode": 0,
[2025-06-05 21:29:02]     "pilotErrorDiag": "",
[2025-06-05 21:29:02]  *** Listing of results directory ***
[2025-06-05 21:29:02] total 391940
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc      5111 Jun  3 23:41 queuedata.json
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc    495897 Jun  3 23:41 pilot3.tar.gz
[2025-06-05 21:29:02] -rwx------ 1 boinc boinc     37140 Jun  3 23:42 runpilot2-wrapper.sh
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc       100 Jun  5 18:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 21:29:02] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 18:26 run_atlas
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc       105 Jun  5 18:26 job.xml
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc      6422 Jun  5 18:26 init_data.xml
[2025-06-05 21:29:02] -rw-r--r-- 2 boinc boinc 215471850 Jun  5 18:26 EVNT.45006593._001851.pool.root.1
[2025-06-05 21:29:02] -rw-r--r-- 2 boinc boinc     15093 Jun  5 18:26 start_atlas.sh
[2025-06-05 21:29:02] drwxrwx--x 2 boinc boinc      4096 Jun  5 18:26 shared
[2025-06-05 21:29:02] -rw-r--r-- 2 boinc boinc    508881 Jun  5 18:26 input.tar.gz
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc         0 Jun  5 18:26 boinc_lockfile
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc      2525 Jun  5 18:26 pandaJob.out
[2025-06-05 21:29:02] -rw------- 1 boinc boinc    983229 Jun  5 18:26 agis_schedconf.cvmfs.json
[2025-06-05 21:29:02] drwx------ 4 boinc boinc      4096 Jun  5 18:26 pilot3
[2025-06-05 21:29:02] -rw------- 1 boinc boinc 179361286 Jun  5 21:27 HITS.45006595._046150.pool.root.1
[2025-06-05 21:29:02] -rw------- 1 boinc boinc        95 Jun  5 21:27 pilot_heartbeat.json
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc       528 Jun  5 21:27 boinc_task_state.xml
[2025-06-05 21:29:02] -rw------- 1 boinc boinc      1036 Jun  5 21:27 memory_monitor_summary.json
[2025-06-05 21:29:02] -rw------- 1 boinc boinc   1598969 Jun  5 21:28 agis_ddmendpoints.agis.ALL.json
[2025-06-05 21:29:02] -rw------- 1 boinc boinc    309547 Jun  5 21:28 log.45006595._046150.job.log.tgz.1
[2025-06-05 21:29:02] -rw------- 1 boinc boinc      7729 Jun  5 21:28 heartbeat.json
[2025-06-05 21:29:02] -rw------- 1 boinc boinc      4436 Jun  5 21:28 pilotlog.txt
[2025-06-05 21:29:02] -rw------- 1 boinc boinc   1030834 Jun  5 21:28 log.45006595._046150.job.log.1
[2025-06-05 21:29:02] -rw------- 1 boinc boinc       357 Jun  5 21:28 output.list
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc       620 Jun  5 21:28 runtime_log
[2025-06-05 21:29:02] -rw------- 1 boinc boinc   1361920 Jun  5 21:28 result.tar.gz
[2025-06-05 21:29:02] -rw------- 1 boinc boinc       664 Jun  5 21:28 uhbNDmNaog7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLGmKDmylhM3n.diag
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc      9026 Jun  5 21:28 runtime_log.err
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc        26 Jun  5 21:28 wrapper_checkpoint.txt
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc      8192 Jun  5 21:29 boinc_mmap_file
[2025-06-05 21:29:02] -rw-r--r-- 1 boinc boinc     21049 Jun  5 21:29 stderr.txt
[2025-06-05 21:29:02] HITS file was successfully produced:
[2025-06-05 21:29:02] -rw------- 1 boinc boinc 179361286 Jun  5 21:27 shared/HITS.pool.root.1
[2025-06-05 21:29:02]  *** Contents of shared directory: ***
[2025-06-05 21:29:02] total 387436
[2025-06-05 21:29:02] -rw-r--r-- 2 boinc boinc 215471850 Jun  5 18:26 ATLAS.root_0
[2025-06-05 21:29:02] -rw-r--r-- 2 boinc boinc     15093 Jun  5 18:26 start_atlas.sh
[2025-06-05 21:29:02] -rw-r--r-- 2 boinc boinc    508881 Jun  5 18:26 input.tar.gz
[2025-06-05 21:29:02] -rw------- 1 boinc boinc 179361286 Jun  5 21:27 HITS.pool.root.1
[2025-06-05 21:29:02] -rw------- 1 boinc boinc   1361920 Jun  5 21:28 result.tar.gz
21:29:04 (2975227): run_atlas exited; CPU time 41844.388106
21:29:04 (2975227): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN