Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:00:57 (1401569): wrapper (7.7.26015): starting
16:00:57 (1401569): wrapper: running run_atlas (--nthreads 2)
[2025-06-04 16:00:57] Arguments: --nthreads 2
[2025-06-04 16:00:57] Threads: 2
[2025-06-04 16:00:57] Checking for CVMFS
[2025-06-04 16:00:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:00:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:00:57] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:00:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:00:58] 2.9.2.0 755054 2693 59920 146781 2 56 28003084 36864001 0 130560 0 1749317 99.990 607313 34404 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 16:00:58] CVMFS is ok
[2025-06-04 16:00:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:00:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:00:58] Further information can be found at the LHC@home message board.
[2025-06-04 16:00:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:00:58] Checking for apptainer binary...
[2025-06-04 16:00:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:00:58] Running /usr/bin/apptainer --version
[2025-06-04 16:00:58] apptainer version 1.3.6-6.1
[2025-06-04 16:00:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:00:58] thA366
[2025-06-04 16:00:58] apptainer works
[2025-06-04 16:00:58] Set ATHENA_PROC_NUMBER=2
[2025-06-04 16:00:58] Set ATHENA_CORE_NUMBER=2
[2025-06-04 16:00:58] Starting ATLAS job with PandaID=6678285845
[2025-06-04 16:00:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:56:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:56:06] 2025-06-04 15:55:41,995 | INFO     | 6871s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-04 17:56:06] 2025-06-04 15:55:42,270 | INFO     | monitor loop #530: job 0:6678285845 is in state 'finished'
[2025-06-04 17:56:06] 2025-06-04 15:55:42,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:56:06] 2025-06-04 15:55:43,137 | INFO     | PID=1405189 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 17:56:06] 2025-06-04 15:55:44,775 | INFO     | monitor loop #531: job 0:6678285845 is in state 'finished'
[2025-06-04 17:56:06] 2025-06-04 15:55:44,775 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:56:06] 2025-06-04 15:55:46,302 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:56:06] 2025-06-04 15:55:46,302 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678285845/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:56:06] 2025-06-04 15:55:46,302 | INFO     | extracted standard info from prmon json
[2025-06-04 17:56:06] 2025-06-04 15:55:46,302 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:56:06] 2025-06-04 15:55:46,302 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:56:06] 2025-06-04 15:55:46,302 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:56:06] 2025-06-04 15:55:46,302 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:56:06] 2025-06-04 15:55:46,303 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:56:06] 2025-06-04 15:55:46,303 | INFO     | sum of square deviations: 435610028.0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | sum of deviations: -6176858536.0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | mean x: 1749049085.5
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | mean y: 2330777.25
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | -- intersect: 24803478774.820133
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | intersect: 24803478774.820133
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | chi2: 1.5849054828659455
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | sum of square deviations: 379832238.0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | sum of deviations: -5547303521.999997
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | mean x: 1749048933.0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | mean y: 2332499.7943925234
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | -- intersect: 25546518420.583023
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | intersect: 25546518420.583023
[2025-06-04 17:56:06] 2025-06-04 15:55:46,304 | INFO     | chi2: 1.5836388299916566
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | current chi2=1.5836388299916566 (change=0.07991977363838666 %)
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | right removable region: 106
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | sum of square deviations: 379832238.0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | sum of deviations: -19043453238.0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | mean x: 1749049238.0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | mean y: 2364903.495327103
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | -- intersect: 87693545489.41635
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | intersect: 87693545489.41635
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | chi2: 0.12346625905402564
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | current chi2=0.12346625905402564 (change=92.20986611575319 %)
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | sum of square deviations: 329031285.5
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | sum of deviations: -14039283895.0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | mean x: 1749049390.5
[2025-06-04 17:56:06] 2025-06-04 15:55:46,305 | INFO     | mean y: 2349860.0588235296
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | -- intersect: 74631730170.47984
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | intersect: 74631730170.47984
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | chi2: 0.10077663330769358
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | current chi2=0.10077663330769358 (change=18.377187354808946 %)
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | left removable region: 20
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | sum of square deviations: 197203697.5
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | sum of deviations: -6857435200.5
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | mean x: 1749049512.5
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | mean y: 2329384.0581395347
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | -- intersect: 60822658041.61216
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | intersect: 60822658041.61216
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | chi2: 0.07049638239046654
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | -- intersect: 60822658041.61216
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | current memory leak: -34.77 B/s (using 86 data points, chi2=0.07)
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | ..............................
[2025-06-04 17:56:06] 2025-06-04 15:55:46,306 | INFO     | . Timing measurements:
[2025-06-04 17:56:06] 2025-06-04 15:55:46,307 | INFO     | . get job = 0 s
[2025-06-04 17:56:06] 2025-06-04 15:55:46,307 | INFO     | . initial setup = 1 s
[2025-06-04 17:56:06] 2025-06-04 15:55:46,307 | INFO     | . payload setup = 8 s
[2025-06-04 17:56:06] 2025-06-04 15:55:46,307 | INFO     | . stage-in = 0 s
[2025-06-04 17:56:06] 2025-06-04 15:55:46,307 | INFO     | . payload execution = 6833 s
[2025-06-04 17:56:06] 2025-06-04 15:55:46,307 | INFO     | . stage-out = 0 s
[2025-06-04 17:56:06] 2025-06-04 15:55:46,307 | INFO     | . log creation = 0 s
[2025-06-04 17:56:06] 2025-06-04 15:55:46,307 | INFO     | ..............................
[2025-06-04 17:56:06] 2025-06-04 15:55:46,338 | INFO     | 
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | job summary report
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | --------------------------------------------------
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | PanDA job id: 6678285845
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | task id: 45006595
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | errors: (none)
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | pilot state: finished 
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | transexitcode: 0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | exeerrorcode: 0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | exeerrordiag: 
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | exitcode: 0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | exitmsg: OK
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | cpuconsumptiontime: 13306 s
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | nevents: 400
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | neventsw: 0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | pid: 1411651
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | pgrp: 1411651
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | corecount: 2
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | event service: False
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | sizes: {0: 2397345, 7: 2397551, 11: 2397579, 6845: 2424728, 6846: 2433675, 6847: 2433731, 6857: 2434029}
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | --------------------------------------------------
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | 
[2025-06-04 17:56:06] 2025-06-04 15:55:46,339 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 17:56:06] 2025-06-04 15:55:46,350 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | job 6678285845 has completed (purged errors)
[2025-06-04 17:56:06] 2025-06-04 15:55:46,351 | INFO     | overall cleanup function is called
[2025-06-04 17:56:06] 2025-06-04 15:55:47,357 | INFO     | --- collectZombieJob: --- 10, [1411651]
[2025-06-04 17:56:06] 2025-06-04 15:55:47,358 | INFO     | zombie collector waiting for pid 1411651
[2025-06-04 17:56:06] 2025-06-04 15:55:47,358 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:56:06] 2025-06-04 15:55:47,358 | INFO     | collected zombie processes
[2025-06-04 17:56:06] 2025-06-04 15:55:47,359 | INFO     | will attempt to kill all subprocesses of pid=1411651
[2025-06-04 17:56:06] 2025-06-04 15:55:47,391 | INFO     | process IDs to be killed: [1411651] (in reverse order)
[2025-06-04 17:56:06] 2025-06-04 15:55:47,412 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:56:06] 2025-06-04 15:55:47,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:56:06] 2025-06-04 15:55:47,413 | INFO     | did not find any defunct processes belonging to 1411651
[2025-06-04 17:56:06] 2025-06-04 15:55:47,414 | INFO     | did not find any defunct processes belonging to 1411651
[2025-06-04 17:56:06] 2025-06-04 15:55:47,414 | INFO     | ready for new job
[2025-06-04 17:56:06] 2025-06-04 15:55:47,414 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:56:06] 2025-06-04 15:55:47,415 | INFO     | **************************************
[2025-06-04 17:56:06] 2025-06-04 15:55:47,415 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:56:06] 2025-06-04 15:55:47,415 | INFO     | **************************************
[2025-06-04 17:56:06] 2025-06-04 15:55:47,415 | INFO     | 
[2025-06-04 17:56:06] 2025-06-04 15:55:47,415 | INFO     | architecture information:
[2025-06-04 17:56:06] 2025-06-04 15:55:47,415 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:56:06] 2025-06-04 15:55:47,423 | INFO     | cat /etc/os-release:
[2025-06-04 17:56:06] NAME="CentOS Linux"
[2025-06-04 17:56:06] VERSION="7 (Core)"
[2025-06-04 17:56:06] ID="centos"
[2025-06-04 17:56:06] ID_LIKE="rhel fedora"
[2025-06-04 17:56:06] VERSION_ID="7"
[2025-06-04 17:56:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:56:06] ANSI_COLOR="0;31"
[2025-06-04 17:56:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:56:06] HOME_URL="https://www.centos.org/"
[2025-06-04 17:56:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:56:06] 
[2025-06-04 17:56:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:56:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:56:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:56:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:56:06] 
[2025-06-04 17:56:06] 2025-06-04 15:55:47,423 | INFO     | **************************************
[2025-06-04 17:56:06] 2025-06-04 15:55:47,926 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 17:56:06] 2025-06-04 15:55:47,938 | INFO     | sufficient remaining disk space (491762221056 B)
[2025-06-04 17:56:06] 2025-06-04 15:55:47,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:56:06] 2025-06-04 15:55:47,938 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:56:06] 2025-06-04 15:55:47,938 | INFO     | update_server=False
[2025-06-04 17:56:06] 2025-06-04 15:55:47,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:56:06] 2025-06-04 15:55:47,939 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 17:56:06] 2025-06-04 15:55:47,939 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:56:06] 2025-06-04 15:55:47,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:56:06] 2025-06-04 15:55:47,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:56:06] 2025-06-04 15:55:47,939 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:56:06] 2025-06-04 15:55:47,954 | INFO     | all data control threads have been joined
[2025-06-04 17:56:06] 2025-06-04 15:55:48,258 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:56:06] 2025-06-04 15:55:48,284 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:56:06] 2025-06-04 15:55:48,285 | INFO     | aborting loop
[2025-06-04 17:56:06] 2025-06-04 15:55:48,944 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:48,945 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:48,948 | INFO     | all payload control threads have been joined
[2025-06-04 17:56:06] 2025-06-04 15:55:48,960 | INFO     | [data] control thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:49,070 | INFO     | all job control threads have been joined
[2025-06-04 17:56:06] 2025-06-04 15:55:49,291 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:49,562 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:49,867 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:49,905 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:49,920 | INFO     | [job] validate thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:49,940 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:49,950 | INFO     | [payload] control thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:50,076 | INFO     | [job] control thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:50,136 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:50,150 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:50,261 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:51,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:56:06] 2025-06-04 15:55:55,259 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:55:58,762 | INFO     | job.realtimelogging is not enabled
[2025-06-04 17:56:06] 2025-06-04 15:55:59,768 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:56:06] 2025-06-04 15:56:01,614 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453865277248)>', '<ExcThread(monitor, started 140453131310848)>']
[2025-06-04 17:56:06] 2025-06-04 15:56:02,013 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:56:06] 2025-06-04 15:56:02,013 | INFO     | [monitor] control thread has ended
[2025-06-04 17:56:06] 2025-06-04 15:56:06,640 | INFO     | all workflow threads have been joined
[2025-06-04 17:56:06] 2025-06-04 15:56:06,641 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:56:06] 2025-06-04 15:56:06,641 | INFO     | traces error code: 0
[2025-06-04 17:56:06] 2025-06-04 15:56:06,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:56:06] 2025-06-04 15:56:06,684 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:56:06] 2025-06-04 15:56:06,687 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:56:06] 2025-06-04 15:56:06,689 [wrapper] pilotpid: 1405189
[2025-06-04 17:56:06] 2025-06-04 15:56:06,691 [wrapper] Pilot exit status: 0
[2025-06-04 17:56:06] 2025-06-04 15:56:06,697 [wrapper] pandaids: 6678285845
[2025-06-04 17:56:06] 2025-06-04 15:56:06,709 [wrapper] cleanup supervisor_pilot 1425706 1405190
[2025-06-04 17:56:06] 2025-06-04 15:56:06,712 [wrapper] Test setup, not cleaning
[2025-06-04 17:56:06] 2025-06-04 15:56:06,714 [wrapper] apfmon messages muted
[2025-06-04 17:56:06] 2025-06-04 15:56:06,716 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:56:06] 2025-06-04 15:56:06,718 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:56:06]  *** Error codes and diagnostics ***
[2025-06-04 17:56:07]     "exeErrorCode": 0,
[2025-06-04 17:56:07]     "exeErrorDiag": "",
[2025-06-04 17:56:07]     "pilotErrorCode": 0,
[2025-06-04 17:56:07]     "pilotErrorDiag": "",
[2025-06-04 17:56:07]  *** Listing of results directory ***
[2025-06-04 17:56:07] total 392708
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc    495897 Jun  4 04:52 pilot3.tar.gz
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc      5111 Jun  4 04:55 queuedata.json
[2025-06-04 17:56:07] -rwx------ 1 boinc boinc     37140 Jun  4 04:58 runpilot2-wrapper.sh
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc       100 Jun  4 16:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:56:07] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 16:00 run_atlas
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc       105 Jun  4 16:00 job.xml
[2025-06-04 17:56:07] -rw-r--r-- 2 boinc boinc 215624260 Jun  4 16:00 EVNT.45006593._002041.pool.root.1
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc      6689 Jun  4 16:00 init_data.xml
[2025-06-04 17:56:07] drwxrwx--x 2 boinc boinc      4096 Jun  4 16:00 shared
[2025-06-04 17:56:07] -rw-r--r-- 2 boinc boinc    508881 Jun  4 16:00 input.tar.gz
[2025-06-04 17:56:07] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:00 start_atlas.sh
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc         0 Jun  4 16:00 boinc_lockfile
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc      2525 Jun  4 16:00 pandaJob.out
[2025-06-04 17:56:07] -rw------- 1 boinc boinc    986819 Jun  4 16:01 agis_schedconf.cvmfs.json
[2025-06-04 17:56:07] -rw------- 1 boinc boinc   1598969 Jun  4 16:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:56:07] drwx------ 4 boinc boinc      4096 Jun  4 16:01 pilot3
[2025-06-04 17:56:07] -rw------- 1 boinc boinc 180919481 Jun  4 17:55 HITS.45006595._050939.pool.root.1
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc       530 Jun  4 17:55 boinc_task_state.xml
[2025-06-04 17:56:07] -rw------- 1 boinc boinc      1016 Jun  4 17:55 memory_monitor_summary.json
[2025-06-04 17:56:07] -rw------- 1 boinc boinc    228866 Jun  4 17:55 log.45006595._050939.job.log.tgz.1
[2025-06-04 17:56:07] -rw------- 1 boinc boinc        95 Jun  4 17:55 pilot_heartbeat.json
[2025-06-04 17:56:07] -rw------- 1 boinc boinc      7651 Jun  4 17:55 heartbeat.json
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:55 boinc_mmap_file
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc        27 Jun  4 17:56 wrapper_checkpoint.txt
[2025-06-04 17:56:07] -rw------- 1 boinc boinc      4552 Jun  4 17:56 pilotlog.txt
[2025-06-04 17:56:07] -rw------- 1 boinc boinc    651105 Jun  4 17:56 log.45006595._050939.job.log.1
[2025-06-04 17:56:07] -rw------- 1 boinc boinc       357 Jun  4 17:56 output.list
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:56 runtime_log
[2025-06-04 17:56:07] -rw------- 1 boinc boinc    901120 Jun  4 17:56 result.tar.gz
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc      8733 Jun  4 17:56 runtime_log.err
[2025-06-04 17:56:07] -rw------- 1 boinc boinc       659 Jun  4 17:56 4DaNDmRVtg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjxmKDmwSE1nm.diag
[2025-06-04 17:56:07] -rw-r--r-- 1 boinc boinc     21135 Jun  4 17:56 stderr.txt
[2025-06-04 17:56:07] HITS file was successfully produced:
[2025-06-04 17:56:07] -rw------- 1 boinc boinc 180919481 Jun  4 17:55 shared/HITS.pool.root.1
[2025-06-04 17:56:07]  *** Contents of shared directory: ***
[2025-06-04 17:56:07] total 388656
[2025-06-04 17:56:07] -rw-r--r-- 2 boinc boinc 215624260 Jun  4 16:00 ATLAS.root_0
[2025-06-04 17:56:07] -rw-r--r-- 2 boinc boinc    508881 Jun  4 16:00 input.tar.gz
[2025-06-04 17:56:07] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:00 start_atlas.sh
[2025-06-04 17:56:07] -rw------- 1 boinc boinc 180919481 Jun  4 17:55 HITS.pool.root.1
[2025-06-04 17:56:07] -rw------- 1 boinc boinc    901120 Jun  4 17:56 result.tar.gz
17:56:08 (1401569): run_atlas exited; CPU time 13334.576404
17:56:08 (1401569): called boinc_finish(0)

</stderr_txt>
]]>

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