Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:58:53 (29008): wrapper (7.7.26015): starting
00:58:53 (29008): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 00:58:53] Arguments: --nthreads 12
[2025-06-04 00:58:53] Threads: 12
[2025-06-04 00:58:53] Checking for CVMFS
[2025-06-04 00:58:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:58:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:58:53] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:58:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:58:54] 2.11.2.0 2947 35186 84560 146768 0 58 18141787 20275200 1 130560 0 15647753 99.981 6565668 7070 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 00:58:54] CVMFS is ok
[2025-06-04 00:58:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:58:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:58:54] Further information can be found at the LHC@home message board.
[2025-06-04 00:58:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:58:54] Checking for apptainer binary...
[2025-06-04 00:58:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:58:54] Running /usr/bin/apptainer --version
[2025-06-04 00:58:54] apptainer version 1.3.2-1.el7
[2025-06-04 00:58:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:58:55] c-205-18.aglt2.org
[2025-06-04 00:58:55] apptainer works
[2025-06-04 00:58:55] Set ATHENA_PROC_NUMBER=12
[2025-06-04 00:58:55] Set ATHENA_CORE_NUMBER=12
[2025-06-04 00:58:55] Starting ATLAS job with PandaID=6667366029
[2025-06-04 00:58:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:33:11]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:33:11]  filesize=372620
[2025-06-04 02:33:11]  filetype=log
[2025-06-04 02:33:11]  guid=73dde2ef-7e16-4c01-894e-6f7e90084cd2
[2025-06-04 02:33:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 02:33:11]  is_altstaged=None
[2025-06-04 02:33:11]  is_tar=False
[2025-06-04 02:33:11]  lfn=log.44871837._071153.job.log.tgz.1
[2025-06-04 02:33:11]  mtime=0
[2025-06-04 02:33:11]  protocol_id=None
[2025-06-04 02:33:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 02:33:11]  replicas=None
[2025-06-04 02:33:11]  scope=mc23_13p6TeV
[2025-06-04 02:33:11]  status=None
[2025-06-04 02:33:11]  status_code=0
[2025-06-04 02:33:11]  storage_token=
[2025-06-04 02:33:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6667366029/log.44871837._071153.job.log.tgz.1
[2025-06-04 02:33:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/fb/log.44871837._071153.job.log.tgz.1
[2025-06-04 02:33:11]  workdir=None
[2025-06-04 02:33:11] ]
[2025-06-04 02:33:11] 2025-06-04 06:32:53,529 | INFO     | transferring file log.44871837._071153.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6667366029/log.44871837._071153.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:33:11] 2025-06-04 06:32:53,529 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6667366029/log.44871837._071153.job.log.tgz.1 /tmp/boinchome/slots/0/log.44871837._071153.job
[2025-06-04 02:33:11] 2025-06-04 06:32:53,552 | INFO     | adding to output.list: log.44871837._071153.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a2/fb/log.44871837._071153.job.log.tg
[2025-06-04 02:33:11] 2025-06-04 06:32:53,553 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:33:11] 2025-06-04 06:32:53,553 | INFO     | summary of transferred files:
[2025-06-04 02:33:11] 2025-06-04 06:32:53,553 | INFO     |  -- lfn=log.44871837._071153.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:33:11] 2025-06-04 06:32:53,553 | INFO     | stage-out finished correctly
[2025-06-04 02:33:11] 2025-06-04 06:32:54,773 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:33:11] 2025-06-04 06:32:54,798 | INFO     | monitor loop #421: job 0:6667366029 is in state 'finished'
[2025-06-04 02:33:11] 2025-06-04 06:32:54,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:33:11] 2025-06-04 06:32:54,858 | INFO     | job 6667366029 has state=finished
[2025-06-04 02:33:11] 2025-06-04 06:32:54,858 | INFO     | preparing for final server update for job 6667366029 in state='finished'
[2025-06-04 02:33:11] 2025-06-04 06:32:54,859 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:33:11] 2025-06-04 06:32:54,859 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:33:11] 2025-06-04 06:32:54,859 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:33:11] 2025-06-04 06:32:54,860 | INFO     | job 6667366029 has finished - writing final server update
[2025-06-04 02:33:11] 2025-06-04 06:32:54,860 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:33:11] 2025-06-04 06:32:54,863 | INFO     | executing command: lscpu
[2025-06-04 02:33:11] 2025-06-04 06:32:54,895 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:33:11] 2025-06-04 06:32:57,307 | INFO     | monitor loop #422: job 0:6667366029 is in state 'finished'
[2025-06-04 02:33:11] 2025-06-04 06:32:57,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:33:11] 2025-06-04 06:32:59,541 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 02:33:11] 2025-06-04 06:32:59,541 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6667366029/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:33:11] 2025-06-04 06:32:59,542 | INFO     | extracted standard info from prmon json
[2025-06-04 02:33:11] 2025-06-04 06:32:59,543 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:33:11] 2025-06-04 06:32:59,543 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:33:11] 2025-06-04 06:32:59,543 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:33:11] 2025-06-04 06:32:59,543 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:33:11] 2025-06-04 06:32:59,546 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:33:11] 2025-06-04 06:32:59,547 | INFO     | sum of square deviations: 190403570.0
[2025-06-04 02:33:11] 2025-06-04 06:32:59,547 | INFO     | sum of deviations: -2213407204.0
[2025-06-04 02:33:11] 2025-06-04 06:32:59,547 | INFO     | mean x: 1749016046.0
[2025-06-04 02:33:11] 2025-06-04 06:32:59,548 | INFO     | mean y: 2703186.317647059
[2025-06-04 02:33:11] 2025-06-04 06:32:59,548 | INFO     | -- intersect: 20334699672.139816
[2025-06-04 02:33:11] 2025-06-04 06:32:59,548 | INFO     | intersect: 20334699672.139816
[2025-06-04 02:33:11] 2025-06-04 06:32:59,548 | INFO     | chi2: 0.08169228216067967
[2025-06-04 02:33:11] 2025-06-04 06:32:59,548 | INFO     | -- intersect: 20334699672.139816
[2025-06-04 02:33:11] 2025-06-04 06:32:59,548 | INFO     | current memory leak: -11.62 B/s (using 85 data points, chi2=0.08)
[2025-06-04 02:33:11] 2025-06-04 06:32:59,549 | INFO     | ..............................
[2025-06-04 02:33:11] 2025-06-04 06:32:59,549 | INFO     | . Timing measurements:
[2025-06-04 02:33:11] 2025-06-04 06:32:59,549 | INFO     | . get job = 0 s
[2025-06-04 02:33:11] 2025-06-04 06:32:59,549 | INFO     | . initial setup = 2 s
[2025-06-04 02:33:11] 2025-06-04 06:32:59,549 | INFO     | . payload setup = 9 s
[2025-06-04 02:33:11] 2025-06-04 06:32:59,549 | INFO     | . stage-in = 0 s
[2025-06-04 02:33:11] 2025-06-04 06:32:59,549 | INFO     | . payload execution = 5594 s
[2025-06-04 02:33:11] 2025-06-04 06:32:59,550 | INFO     | . stage-out = 0 s
[2025-06-04 02:33:11] 2025-06-04 06:32:59,550 | INFO     | . log creation = 0 s
[2025-06-04 02:33:11] 2025-06-04 06:32:59,550 | INFO     | ..............................
[2025-06-04 02:33:11] 2025-06-04 06:32:59,633 | INFO     | 
[2025-06-04 02:33:11] 2025-06-04 06:32:59,634 | INFO     | job summary report
[2025-06-04 02:33:11] 2025-06-04 06:32:59,634 | INFO     | --------------------------------------------------
[2025-06-04 02:33:11] 2025-06-04 06:32:59,634 | INFO     | PanDA job id: 6667366029
[2025-06-04 02:33:11] 2025-06-04 06:32:59,634 | INFO     | task id: 44871837
[2025-06-04 02:33:11] 2025-06-04 06:32:59,634 | INFO     | errors: (none)
[2025-06-04 02:33:11] 2025-06-04 06:32:59,634 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:33:11] 2025-06-04 06:32:59,635 | INFO     | pilot state: finished 
[2025-06-04 02:33:11] 2025-06-04 06:32:59,635 | INFO     | transexitcode: 0
[2025-06-04 02:33:11] 2025-06-04 06:32:59,635 | INFO     | exeerrorcode: 0
[2025-06-04 02:33:11] 2025-06-04 06:32:59,635 | INFO     | exeerrordiag: 
[2025-06-04 02:33:11] 2025-06-04 06:32:59,635 | INFO     | exitcode: 0
[2025-06-04 02:33:11] 2025-06-04 06:32:59,635 | INFO     | exitmsg: OK
[2025-06-04 02:33:11] 2025-06-04 06:32:59,635 | INFO     | cpuconsumptiontime: 61087 s
[2025-06-04 02:33:11] 2025-06-04 06:32:59,636 | INFO     | nevents: 400
[2025-06-04 02:33:11] 2025-06-04 06:32:59,636 | INFO     | neventsw: 0
[2025-06-04 02:33:11] 2025-06-04 06:32:59,636 | INFO     | pid: 6803
[2025-06-04 02:33:11] 2025-06-04 06:32:59,636 | INFO     | pgrp: 6803
[2025-06-04 02:33:11] 2025-06-04 06:32:59,636 | INFO     | corecount: 12
[2025-06-04 02:33:11] 2025-06-04 06:32:59,636 | INFO     | event service: False
[2025-06-04 02:33:11] 2025-06-04 06:32:59,637 | INFO     | sizes: {0: 2405234, 5: 2405440, 11: 2405496, 5607: 2432040, 5608: 2432039, 5609: 2441036, 5610: 2441220, 5615: 2441390}
[2025-06-04 02:33:11] 2025-06-04 06:32:59,637 | INFO     | --------------------------------------------------
[2025-06-04 02:33:11] 2025-06-04 06:32:59,637 | INFO     | 
[2025-06-04 02:33:11] 2025-06-04 06:32:59,637 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:33:11] 2025-06-04 06:32:59,660 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,661 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,661 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,661 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,661 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,662 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,662 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,662 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,662 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,662 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,662 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,663 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,663 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,663 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,663 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,663 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,663 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,664 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:33:11] 2025-06-04 06:32:59,664 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,664 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:33:11] 2025-06-04 06:32:59,664 | INFO     | job 6667366029 has completed (purged errors)
[2025-06-04 02:33:11] 2025-06-04 06:32:59,664 | INFO     | overall cleanup function is called
[2025-06-04 02:33:11] 2025-06-04 06:33:00,673 | INFO     | --- collectZombieJob: --- 10, [6803]
[2025-06-04 02:33:11] 2025-06-04 06:33:00,673 | INFO     | zombie collector waiting for pid 6803
[2025-06-04 02:33:11] 2025-06-04 06:33:00,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:33:11] 2025-06-04 06:33:00,673 | INFO     | collected zombie processes
[2025-06-04 02:33:11] 2025-06-04 06:33:00,673 | INFO     | will attempt to kill all subprocesses of pid=6803
[2025-06-04 02:33:11] 2025-06-04 06:33:00,763 | INFO     | process IDs to be killed: [6803] (in reverse order)
[2025-06-04 02:33:11] 2025-06-04 06:33:00,814 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:33:11] 2025-06-04 06:33:00,815 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:33:11] 2025-06-04 06:33:00,819 | INFO     | did not find any defunct processes belonging to 6803
[2025-06-04 02:33:11] 2025-06-04 06:33:00,821 | INFO     | did not find any defunct processes belonging to 6803
[2025-06-04 02:33:11] 2025-06-04 06:33:00,821 | INFO     | ready for new job
[2025-06-04 02:33:11] 2025-06-04 06:33:00,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:33:11] 2025-06-04 06:33:00,822 | INFO     | **************************************
[2025-06-04 02:33:11] 2025-06-04 06:33:00,822 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:33:11] 2025-06-04 06:33:00,822 | INFO     | **************************************
[2025-06-04 02:33:11] 2025-06-04 06:33:00,822 | INFO     | 
[2025-06-04 02:33:11] 2025-06-04 06:33:00,823 | INFO     | architecture information:
[2025-06-04 02:33:11] 2025-06-04 06:33:00,823 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:33:11] 2025-06-04 06:33:00,838 | INFO     | cat /etc/os-release:
[2025-06-04 02:33:11] NAME="CentOS Linux"
[2025-06-04 02:33:11] VERSION="7 (Core)"
[2025-06-04 02:33:11] ID="centos"
[2025-06-04 02:33:11] ID_LIKE="rhel fedora"
[2025-06-04 02:33:11] VERSION_ID="7"
[2025-06-04 02:33:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:33:11] ANSI_COLOR="0;31"
[2025-06-04 02:33:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:33:11] HOME_URL="https://www.centos.org/"
[2025-06-04 02:33:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:33:11] 
[2025-06-04 02:33:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:33:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:33:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:33:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:33:11] 
[2025-06-04 02:33:11] 2025-06-04 06:33:00,838 | INFO     | **************************************
[2025-06-04 02:33:11] 2025-06-04 06:33:01,341 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:33:11] 2025-06-04 06:33:01,359 | INFO     | sufficient remaining disk space (29381099520 B)
[2025-06-04 02:33:11] 2025-06-04 06:33:01,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:33:11] 2025-06-04 06:33:01,360 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:33:11] 2025-06-04 06:33:01,360 | INFO     | update_server=False
[2025-06-04 02:33:11] 2025-06-04 06:33:01,360 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:33:11] 2025-06-04 06:33:01,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:33:11] 2025-06-04 06:33:01,361 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 02:33:11] 2025-06-04 06:33:01,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:33:11] 2025-06-04 06:33:01,362 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:33:11] 2025-06-04 06:33:01,362 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:33:11] 2025-06-04 06:33:01,362 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:33:11] 2025-06-04 06:33:01,363 | INFO     | aborting loop
[2025-06-04 02:33:11] 2025-06-04 06:33:01,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:33:11] 2025-06-04 06:33:01,650 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:33:11] 2025-06-04 06:33:02,208 | INFO     | all job control threads have been joined
[2025-06-04 02:33:11] 2025-06-04 06:33:02,283 | INFO     | all data control threads have been joined
[2025-06-04 02:33:11] 2025-06-04 06:33:02,362 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:02,366 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:02,368 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:02,370 | INFO     | all payload control threads have been joined
[2025-06-04 02:33:11] 2025-06-04 06:33:02,702 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:02,879 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:02,893 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:02,898 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:03,213 | INFO     | [job] control thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:03,288 | INFO     | [data] control thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:03,322 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:03,376 | INFO     | [payload] control thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:03,377 | INFO     | [job] validate thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:03,397 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:03,651 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:03,733 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:05,368 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:33:11] 2025-06-04 06:33:05,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140651949107008)>', '<ExcThread(monitor, started 140650758522624)>']
[2025-06-04 02:33:11] 2025-06-04 06:33:06,383 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:33:11] 2025-06-04 06:33:06,383 | INFO     | [monitor] control thread has ended
[2025-06-04 02:33:11] 2025-06-04 06:33:10,729 | INFO     | all workflow threads have been joined
[2025-06-04 02:33:11] 2025-06-04 06:33:10,729 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:33:11] 2025-06-04 06:33:10,729 | INFO     | traces error code: 0
[2025-06-04 02:33:11] 2025-06-04 06:33:10,730 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:33:11] 2025-06-04 06:33:10,816 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:33:11] 2025-06-04 06:33:10,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:33:11] 2025-06-04 06:33:10,823 [wrapper] pilotpid: 32652
[2025-06-04 02:33:11] 2025-06-04 06:33:10,827 [wrapper] Pilot exit status: 0
[2025-06-04 02:33:11] 2025-06-04 06:33:10,844 [wrapper] pandaids: 6667366029
[2025-06-04 02:33:11] 2025-06-04 06:33:10,883 [wrapper] cleanup supervisor_pilot 21683 32653
[2025-06-04 02:33:11] 2025-06-04 06:33:10,887 [wrapper] Test setup, not cleaning
[2025-06-04 02:33:11] 2025-06-04 06:33:10,891 [wrapper] apfmon messages muted
[2025-06-04 02:33:11] 2025-06-04 06:33:10,895 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:33:11] 2025-06-04 06:33:10,899 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:33:11]  *** Error codes and diagnostics ***
[2025-06-04 02:33:11]     "exeErrorCode": 0,
[2025-06-04 02:33:11]     "exeErrorDiag": "",
[2025-06-04 02:33:11]     "pilotErrorCode": 0,
[2025-06-04 02:33:11]     "pilotErrorDiag": "",
[2025-06-04 02:33:11]  *** Listing of results directory ***
[2025-06-04 02:33:11] total 418572
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas    495897 May 27 13:43 pilot3.tar.gz
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas      5111 May 27 13:46 queuedata.json
[2025-06-04 02:33:11] -rwx------ 1 boincer umatlas     37140 May 27 13:47 runpilot2-wrapper.sh
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas       100 Jun  4 00:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:33:11] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 00:58 run_atlas
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas       105 Jun  4 00:58 job.xml
[2025-06-04 02:33:11] -rw-r--r-- 2 boincer umatlas 224667255 Jun  4 00:58 EVNT.44871834._002795.pool.root.1
[2025-06-04 02:33:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 00:58 start_atlas.sh
[2025-06-04 02:33:11] drwxrwx--x 2 boincer umatlas      4096 Jun  4 00:58 shared
[2025-06-04 02:33:11] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 00:58 input.tar.gz
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas         0 Jun  4 00:58 boinc_lockfile
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas      2559 Jun  4 00:58 pandaJob.out
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas    986745 Jun  4 00:59 agis_schedconf.cvmfs.json
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas   1603667 Jun  4 00:59 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:33:11] drwx------ 4 boincer umatlas      4096 Jun  4 00:59 pilot3
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 02:27 init_data.xml
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas        95 Jun  4 02:32 pilot_heartbeat.json
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas 198317955 Jun  4 02:32 HITS.44871837._071153.pool.root.1
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas       529 Jun  4 02:32 boinc_task_state.xml
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas      1060 Jun  4 02:32 memory_monitor_summary.json
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas    372620 Jun  4 02:32 log.44871837._071153.job.log.tgz.1
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas      7748 Jun  4 02:32 heartbeat.json
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas        27 Jun  4 02:33 wrapper_checkpoint.txt
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 02:33 boinc_mmap_file
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas      4476 Jun  4 02:33 pilotlog.txt
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas    527605 Jun  4 02:33 log.44871837._071153.job.log.1
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas       357 Jun  4 02:33 output.list
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas       620 Jun  4 02:33 runtime_log
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas    921600 Jun  4 02:33 result.tar.gz
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 02:33 runtime_log.err
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas       659 Jun  4 02:33 itcMDmYZDe7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDma1ZKDmbJqMBn.diag
[2025-06-04 02:33:11] -rw-r--r-- 1 boincer umatlas     21126 Jun  4 02:33 stderr.txt
[2025-06-04 02:33:11] HITS file was successfully produced:
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas 198317955 Jun  4 02:32 shared/HITS.pool.root.1
[2025-06-04 02:33:11]  *** Contents of shared directory: ***
[2025-06-04 02:33:11] total 414496
[2025-06-04 02:33:11] -rw-r--r-- 2 boincer umatlas 224667255 Jun  4 00:58 ATLAS.root_0
[2025-06-04 02:33:11] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 00:58 start_atlas.sh
[2025-06-04 02:33:11] -rw-r--r-- 2 boincer umatlas    508884 Jun  4 00:58 input.tar.gz
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas 198317955 Jun  4 02:32 HITS.pool.root.1
[2025-06-04 02:33:11] -rw------- 1 boincer umatlas    921600 Jun  4 02:33 result.tar.gz
02:33:12 (29008): run_atlas exited; CPU time 61069.011044
02:33:12 (29008): called boinc_finish(0)

</stderr_txt>
]]>

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