Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:44:24 (29395): wrapper (7.7.26015): starting
18:44:24 (29395): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 18:44:25] Arguments: --nthreads 8
[2025-06-04 18:44:25] Threads: 8
[2025-06-04 18:44:25] Checking for CVMFS
[2025-06-04 18:44:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 18:44:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 18:44:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 18:44:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 18:44:26] 2.11.2.0 26432 33452 93256 146788 2 215 18048650 25165824 2598 130560 0 17395744 99.764 20683342 2117 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 18:44:26] CVMFS is ok
[2025-06-04 18:44:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 18:44:26] Checking for apptainer binary...
[2025-06-04 18:44:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 18:44:26] Running /usr/bin/apptainer --version
[2025-06-04 18:44:26] apptainer version 1.3.2-1.el7
[2025-06-04 18:44:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 18:44:28] cg-vwn331.simple-grid.lan
[2025-06-04 18:44:28] apptainer works
[2025-06-04 18:44:28] Set ATHENA_PROC_NUMBER=8
[2025-06-04 18:44:28] Set ATHENA_CORE_NUMBER=8
[2025-06-04 18:44:28] Starting ATLAS job with PandaID=6678212645
[2025-06-04 18:44:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:59:07]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:59:07] 2025-06-04 20:42:14,953 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:59:07] 2025-06-04 20:42:17,461 | INFO     | monitor loop #1044: job 0:6678212645 is in state 'finished'
[2025-06-05 00:59:07] 2025-06-04 20:42:17,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 00:59:07] 2025-06-04 20:42:18,799 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 00:59:07] 2025-06-04 20:42:18,800 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6678212645/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:59:07] 2025-06-04 20:42:18,801 | INFO     | extracted standard info from prmon json
[2025-06-05 00:59:07] 2025-06-04 20:42:18,801 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:59:07] 2025-06-04 20:42:18,801 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:59:07] 2025-06-04 20:42:18,801 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:59:07] 2025-06-04 20:42:18,802 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:59:07] 2025-06-04 20:42:18,807 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:59:07] 2025-06-04 20:42:18,807 | INFO     | sum of square deviations: 3579276412.5
[2025-06-05 00:59:07] 2025-06-04 20:42:18,809 | INFO     | sum of deviations: 53797671531.49998
[2025-06-05 00:59:07] 2025-06-04 20:42:18,809 | INFO     | mean x: 1749062778.5
[2025-06-05 00:59:07] 2025-06-04 20:42:18,810 | INFO     | mean y: 2441666.225663717
[2025-06-05 00:59:07] 2025-06-04 20:42:18,810 | INFO     | -- intersect: -26286532417.224144
[2025-06-05 00:59:07] 2025-06-04 20:42:18,810 | INFO     | intersect: -26286532417.224144
[2025-06-05 00:59:07] 2025-06-04 20:42:18,810 | INFO     | chi2: 5.127965760829547
[2025-06-05 00:59:07] 2025-06-04 20:42:18,820 | INFO     | sum of square deviations: 3346927870.0
[2025-06-05 00:59:07] 2025-06-04 20:42:18,822 | INFO     | sum of deviations: 67288251002.0
[2025-06-05 00:59:07] 2025-06-04 20:42:18,822 | INFO     | mean x: 1749062626.0
[2025-06-05 00:59:07] 2025-06-04 20:42:18,822 | INFO     | mean y: 2450345.185520362
[2025-06-05 00:59:07] 2025-06-04 20:42:18,822 | INFO     | -- intersect: -35161547675.633865
[2025-06-05 00:59:07] 2025-06-04 20:42:18,822 | INFO     | intersect: -35161547675.633865
[2025-06-05 00:59:07] 2025-06-04 20:42:18,823 | INFO     | chi2: 4.397189627391163
[2025-06-05 00:59:07] 2025-06-04 20:42:18,823 | INFO     | current chi2=4.397189627391163 (change=14.250799781474488 %)
[2025-06-05 00:59:07] 2025-06-04 20:42:18,823 | INFO     | right removable region: 220
[2025-06-05 00:59:07] 2025-06-04 20:42:18,824 | INFO     | sum of square deviations: 3346927870.0
[2025-06-05 00:59:07] 2025-06-04 20:42:18,825 | INFO     | sum of deviations: -18970275991.000004
[2025-06-05 00:59:07] 2025-06-04 20:42:18,826 | INFO     | mean x: 1749062931.0
[2025-06-05 00:59:07] 2025-06-04 20:42:18,826 | INFO     | mean y: 2489326.6153846155
[2025-06-05 00:59:07] 2025-06-04 20:42:18,826 | INFO     | -- intersect: 9916119920.243147
[2025-06-05 00:59:07] 2025-06-04 20:42:18,826 | INFO     | intersect: 9916119920.243147
[2025-06-05 00:59:07] 2025-06-04 20:42:18,826 | INFO     | chi2: 0.9921191219258108
[2025-06-05 00:59:07] 2025-06-04 20:42:18,826 | INFO     | current chi2=0.9921191219258108 (change=80.65277405898053 %)
[2025-06-05 00:59:07] 2025-06-04 20:42:18,827 | INFO     | sum of square deviations: 3124858590.0
[2025-06-05 00:59:07] 2025-06-04 20:42:18,829 | INFO     | sum of deviations: -27723660487.5
[2025-06-05 00:59:07] 2025-06-04 20:42:18,829 | INFO     | mean x: 1749063083.5
[2025-06-05 00:59:07] 2025-06-04 20:42:18,829 | INFO     | mean y: 2495289.1157407407
[2025-06-05 00:59:07] 2025-06-04 20:42:18,829 | INFO     | -- intersect: 15520135432.369026
[2025-06-05 00:59:07] 2025-06-04 20:42:18,829 | INFO     | intersect: 15520135432.369026
[2025-06-05 00:59:07] 2025-06-04 20:42:18,838 | INFO     | chi2: 0.9012091921750006
[2025-06-05 00:59:07] 2025-06-04 20:42:18,838 | INFO     | current chi2=0.9012091921750006 (change=9.163207092949092 %)
[2025-06-05 00:59:07] 2025-06-04 20:42:18,859 | INFO     | left removable region: 20
[2025-06-05 00:59:07] 2025-06-04 20:42:18,859 | INFO     | sum of square deviations: 2480604650.0
[2025-06-05 00:59:07] 2025-06-04 20:42:18,861 | INFO     | sum of deviations: 1300832045.4999998
[2025-06-05 00:59:07] 2025-06-04 20:42:18,861 | INFO     | mean x: 1749063205.5
[2025-06-05 00:59:07] 2025-06-04 20:42:18,861 | INFO     | mean y: 2494478.515
[2025-06-05 00:59:07] 2025-06-04 20:42:18,861 | INFO     | -- intersect: -914716358.4957875
[2025-06-05 00:59:07] 2025-06-04 20:42:18,861 | INFO     | intersect: -914716358.4957875
[2025-06-05 00:59:07] 2025-06-04 20:42:18,862 | INFO     | chi2: 0.038051317781761906
[2025-06-05 00:59:07] 2025-06-04 20:42:18,862 | INFO     | -- intersect: -914716358.4957875
[2025-06-05 00:59:07] 2025-06-04 20:42:18,862 | INFO     | current memory leak: 0.52 B/s (using 200 data points, chi2=0.04)
[2025-06-05 00:59:07] 2025-06-04 20:42:18,863 | INFO     | ..............................
[2025-06-05 00:59:07] 2025-06-04 20:42:18,863 | INFO     | . Timing measurements:
[2025-06-05 00:59:07] 2025-06-04 20:42:18,863 | INFO     | . get job = 0 s
[2025-06-05 00:59:07] 2025-06-04 20:42:18,863 | INFO     | . initial setup = 2 s
[2025-06-05 00:59:07] 2025-06-04 20:42:18,863 | INFO     | . payload setup = 165 s
[2025-06-05 00:59:07] 2025-06-04 20:42:18,863 | INFO     | . stage-in = 0 s
[2025-06-05 00:59:07] 2025-06-04 20:42:18,864 | INFO     | . payload execution = 13876 s
[2025-06-05 00:59:07] 2025-06-04 20:42:18,864 | INFO     | . stage-out = 1 s
[2025-06-05 00:59:07] 2025-06-04 20:42:18,864 | INFO     | . log creation = 0 s
[2025-06-05 00:59:07] 2025-06-04 20:42:18,864 | INFO     | ..............................
[2025-06-05 00:59:07] 2025-06-04 20:42:19,053 | INFO     | 
[2025-06-05 00:59:07] 2025-06-04 20:42:19,054 | INFO     | job summary report
[2025-06-05 00:59:07] 2025-06-04 20:42:19,054 | INFO     | --------------------------------------------------
[2025-06-05 00:59:07] 2025-06-04 20:42:19,054 | INFO     | PanDA job id: 6678212645
[2025-06-05 00:59:07] 2025-06-04 20:42:19,054 | INFO     | task id: 45006595
[2025-06-05 00:59:07] 2025-06-04 20:42:19,054 | INFO     | errors: (none)
[2025-06-05 00:59:07] 2025-06-04 20:42:19,054 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:59:07] 2025-06-04 20:42:19,054 | INFO     | pilot state: finished 
[2025-06-05 00:59:07] 2025-06-04 20:42:19,055 | INFO     | transexitcode: 0
[2025-06-05 00:59:07] 2025-06-04 20:42:19,055 | INFO     | exeerrorcode: 0
[2025-06-05 00:59:07] 2025-06-04 20:42:19,055 | INFO     | exeerrordiag: 
[2025-06-05 00:59:07] 2025-06-04 20:42:19,055 | INFO     | exitcode: 0
[2025-06-05 00:59:07] 2025-06-04 20:42:19,055 | INFO     | exitmsg: OK
[2025-06-05 00:59:07] 2025-06-04 20:42:19,055 | INFO     | cpuconsumptiontime: 51907 s
[2025-06-05 00:59:07] 2025-06-04 20:42:19,055 | INFO     | nevents: 400
[2025-06-05 00:59:07] 2025-06-04 20:42:19,055 | INFO     | neventsw: 0
[2025-06-05 00:59:07] 2025-06-04 20:42:19,055 | INFO     | pid: 14133
[2025-06-05 00:59:07] 2025-06-04 20:42:19,055 | INFO     | pgrp: 14133
[2025-06-05 00:59:07] 2025-06-04 20:42:19,055 | INFO     | corecount: 8
[2025-06-05 00:59:07] 2025-06-04 20:42:19,056 | INFO     | event service: False
[2025-06-05 00:59:07] 2025-06-04 20:42:19,056 | INFO     | sizes: {0: 2397336, 1: 2397364, 12: 2397364, 23: 2397392, 34: 2397420, 43: 2397654, 44: 2397810, 14044: 2427535, 14045: 2427534, 14048: 2436615, 14133: 2436729}
[2025-06-05 00:59:07] 2025-06-04 20:42:19,056 | INFO     | --------------------------------------------------
[2025-06-05 00:59:07] 2025-06-04 20:42:19,056 | INFO     | 
[2025-06-05 00:59:07] 2025-06-04 20:42:19,056 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-05 00:59:07] 2025-06-04 20:42:19,510 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,511 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,511 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,511 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,511 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,511 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,512 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,512 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,512 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,512 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:59:07] 2025-06-04 20:42:19,512 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,512 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:59:07] 2025-06-04 20:42:19,513 | INFO     | job 6678212645 has completed (purged errors)
[2025-06-05 00:59:07] 2025-06-04 20:42:19,513 | INFO     | overall cleanup function is called
[2025-06-05 00:59:07] 2025-06-04 20:42:20,521 | INFO     | --- collectZombieJob: --- 10, [14133]
[2025-06-05 00:59:07] 2025-06-04 20:42:20,522 | INFO     | zombie collector waiting for pid 14133
[2025-06-05 00:59:07] 2025-06-04 20:42:20,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:59:07] 2025-06-04 20:42:20,522 | INFO     | collected zombie processes
[2025-06-05 00:59:07] 2025-06-04 20:42:20,522 | INFO     | will attempt to kill all subprocesses of pid=14133
[2025-06-05 00:59:07] 2025-06-04 20:42:20,640 | INFO     | process IDs to be killed: [14133] (in reverse order)
[2025-06-05 00:59:07] 2025-06-04 20:42:21,473 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:59:07] 2025-06-04 20:42:21,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:59:07] 2025-06-04 20:42:21,477 | INFO     | did not find any defunct processes belonging to 14133
[2025-06-05 00:59:07] 2025-06-04 20:42:21,481 | INFO     | did not find any defunct processes belonging to 14133
[2025-06-05 00:59:07] 2025-06-04 20:42:21,481 | INFO     | ready for new job
[2025-06-05 00:59:07] 2025-06-04 20:42:21,482 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:59:07] 2025-06-04 20:42:21,484 | INFO     | **************************************
[2025-06-05 00:59:07] 2025-06-04 20:42:21,484 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:59:07] 2025-06-04 20:42:21,484 | INFO     | **************************************
[2025-06-05 00:59:07] 2025-06-04 20:42:21,484 | INFO     | 
[2025-06-05 00:59:07] 2025-06-04 20:42:21,485 | INFO     | pilot is running in a VM
[2025-06-05 00:59:07] 2025-06-04 20:42:21,485 | INFO     | architecture information:
[2025-06-05 00:59:07] 2025-06-04 20:42:21,489 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:59:07] 2025-06-04 20:42:21,677 | INFO     | cat /etc/os-release:
[2025-06-05 00:59:07] NAME="CentOS Linux"
[2025-06-05 00:59:07] VERSION="7 (Core)"
[2025-06-05 00:59:07] ID="centos"
[2025-06-05 00:59:07] ID_LIKE="rhel fedora"
[2025-06-05 00:59:07] VERSION_ID="7"
[2025-06-05 00:59:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:59:07] ANSI_COLOR="0;31"
[2025-06-05 00:59:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:59:07] HOME_URL="https://www.centos.org/"
[2025-06-05 00:59:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:59:07] 
[2025-06-05 00:59:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:59:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:59:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:59:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:59:07] 
[2025-06-05 00:59:07] 2025-06-04 20:42:21,678 | INFO     | **************************************
[2025-06-05 00:59:07] 2025-06-04 20:42:22,181 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-05 00:59:07] 2025-06-04 20:42:22,375 | INFO     | sufficient remaining disk space (497292410880 B)
[2025-06-05 00:59:07] 2025-06-04 20:42:22,375 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:59:07] 2025-06-04 20:42:22,376 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:59:07] 2025-06-04 20:42:22,376 | INFO     | update_server=False
[2025-06-05 00:59:07] 2025-06-04 20:42:22,376 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:59:07] 2025-06-04 20:42:22,376 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-05 00:59:07] 2025-06-04 20:42:22,377 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:59:07] 2025-06-04 20:42:22,377 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:59:07] 2025-06-04 20:42:22,377 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:59:07] 2025-06-04 20:42:22,386 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:59:07] 2025-06-04 20:42:22,457 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:59:07] 2025-06-04 20:42:22,474 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-05 00:59:07] 2025-06-04 20:42:22,475 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-05 00:59:07] 2025-06-04 20:42:22,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:59:07] 2025-06-04 20:42:22,475 | INFO     | will abort loop
[2025-06-05 00:59:07] 2025-06-04 20:42:22,481 | INFO     | all data control threads have been joined
[2025-06-05 00:59:07] 2025-06-04 20:42:22,804 | INFO     | all payload control threads have been joined
[2025-06-05 00:59:07] 2025-06-04 20:42:23,212 | INFO     | all job control threads have been joined
[2025-06-05 00:59:07] 2025-06-04 20:42:23,382 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:23,390 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:23,482 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:23,487 | INFO     | [data] control thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:23,688 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:23,696 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:23,811 | INFO     | [payload] control thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:24,067 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:59:07] 2025-06-04 20:42:24,219 | INFO     | [job] control thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:24,356 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:24,465 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:24,771 | INFO     | [job] validate thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:24,811 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:24,966 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:25,074 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:26,395 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:32,482 | INFO     | job.realtimelogging is not enabled
[2025-06-05 00:59:07] 2025-06-04 20:42:33,489 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:59:07] 2025-06-04 20:42:35,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140023944349504)>', '<ExcThread(monitor, started 140023357753088)>']
[2025-06-05 00:59:07] 2025-06-04 20:42:36,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:59:07] 2025-06-04 20:42:36,459 | INFO     | [monitor] control thread has ended
[2025-06-05 00:59:07] 2025-06-04 20:42:40,507 | INFO     | all workflow threads have been joined
[2025-06-05 00:59:07] 2025-06-04 20:42:40,508 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:59:07] 2025-06-04 20:42:40,508 | INFO     | traces error code: 0
[2025-06-05 00:59:07] 2025-06-04 20:42:40,508 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:59:07] 2025-06-04 20:42:40,834 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:59:07] 2025-06-04 20:42:40,887 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:59:07] 2025-06-04 20:42:40,971 [wrapper] pilotpid: 5260
[2025-06-05 00:59:07] 2025-06-04 20:42:41,020 [wrapper] Pilot exit status: 0
[2025-06-05 00:59:07] 2025-06-04 20:42:41,457 [wrapper] pandaids: 6678212645
[2025-06-05 00:59:07] 2025-06-04 20:42:42,101 [wrapper] cleanup supervisor_pilot 12401 5261
[2025-06-05 00:59:07] 2025-06-04 20:42:42,174 [wrapper] Test setup, not cleaning
[2025-06-05 00:59:07] 2025-06-04 20:42:42,230 [wrapper] apfmon messages muted
[2025-06-05 00:59:07] 2025-06-04 20:42:42,325 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:59:07] 2025-06-04 20:42:42,417 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:59:07]  *** Error codes and diagnostics ***
[2025-06-05 00:59:07]     "exeErrorCode": 0,
[2025-06-05 00:59:07]     "exeErrorDiag": "",
[2025-06-05 00:59:07]     "pilotErrorCode": 0,
[2025-06-05 00:59:07]     "pilotErrorDiag": "",
[2025-06-05 00:59:07]  *** Listing of results directory ***
[2025-06-05 00:59:07] total 394760
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:42 pilot3.tar.gz
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc      5111 Jun  4 01:46 queuedata.json
[2025-06-05 00:59:07] -rwx------. 1 boinc boinc     37140 Jun  4 01:46 runpilot2-wrapper.sh
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc       100 Jun  4 18:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:59:07] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 18:44 run_atlas
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc       105 Jun  4 18:44 job.xml
[2025-06-05 00:59:07] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:44 start_atlas.sh
[2025-06-05 00:59:07] drwxrwx--x. 2 boinc boinc        68 Jun  4 18:44 shared
[2025-06-05 00:59:07] -rw-r--r--. 2 boinc boinc    508878 Jun  4 18:44 input.tar.gz
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc      6390 Jun  4 18:44 init_data.xml
[2025-06-05 00:59:07] -rw-r--r--. 2 boinc boinc 215047511 Jun  4 18:44 EVNT.45006593._001946.pool.root.1
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc         0 Jun  4 18:44 boinc_lockfile
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc      2522 Jun  4 18:44 pandaJob.out
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc    990984 Jun  4 18:44 agis_schedconf.cvmfs.json
[2025-06-05 00:59:07] drwx------. 4 boinc boinc      4096 Jun  4 18:44 pilot3
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc 182186219 Jun  4 22:40 HITS.45006595._048504.pool.root.1
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc       531 Jun  4 22:40 boinc_task_state.xml
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc      1015 Jun  4 22:40 memory_monitor_summary.json
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc   1598969 Jun  4 22:40 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc    371170 Jun  4 22:40 log.45006595._048504.job.log.tgz.1
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc        95 Jun  4 22:41 pilot_heartbeat.json
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc      7684 Jun  4 22:42 heartbeat.json
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc      4797 Jun  4 22:42 pilotlog.txt
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc   1216693 Jun  4 22:42 log.45006595._048504.job.log.1
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc       357 Jun  4 22:42 output.list
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc       620 Jun  4 22:42 runtime_log
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc   1607680 Jun  4 22:42 result.tar.gz
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc       656 Jun  4 22:42 95kKDmOWqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfXmKDmZV0sJm.diag
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc      8659 Jun  4 22:42 runtime_log.err
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc      8192 Jun  5 00:59 boinc_mmap_file
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc        28 Jun  5 00:59 wrapper_checkpoint.txt
[2025-06-05 00:59:07] -rw-r--r--. 1 boinc boinc     20739 Jun  5 00:59 stderr.txt
[2025-06-05 00:59:07] HITS file was successfully produced:
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc 182186219 Jun  4 22:40 shared/HITS.pool.root.1
[2025-06-05 00:59:07]  *** Contents of shared directory: ***
[2025-06-05 00:59:07] total 390016
[2025-06-05 00:59:07] -rw-r--r--. 2 boinc boinc     15093 Jun  4 18:44 start_atlas.sh
[2025-06-05 00:59:07] -rw-r--r--. 2 boinc boinc    508878 Jun  4 18:44 input.tar.gz
[2025-06-05 00:59:07] -rw-r--r--. 2 boinc boinc 215047511 Jun  4 18:44 ATLAS.root_0
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc 182186219 Jun  4 22:40 HITS.pool.root.1
[2025-06-05 00:59:07] -rw-------. 1 boinc boinc   1607680 Jun  4 22:42 result.tar.gz
00:59:09 (29395): run_atlas exited; CPU time 52100.007892
00:59:09 (29395): called boinc_finish(0)

</stderr_txt>
]]>

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