Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:40:38 (20260): wrapper (7.7.26015): starting
14:40:38 (20260): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 14:40:38] Arguments: --nthreads 8
[2025-06-04 14:40:38] Threads: 8
[2025-06-04 14:40:38] Checking for CVMFS
[2025-06-04 14:40:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:40:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:40:39] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:40:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:40:40] 2.11.2.0 320 33417 98640 146780 3 59 15168755 25165824 3521 130560 0 18468060 99.783 20187651 2170 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 14:40:40] CVMFS is ok
[2025-06-04 14:40:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:40:40] Checking for apptainer binary...
[2025-06-04 14:40:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:40:40] Running /usr/bin/apptainer --version
[2025-06-04 14:40:40] apptainer version 1.3.2-1.el7
[2025-06-04 14:40:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:57:40] cg-vwn219.simple-grid.lan
[2025-06-04 14:57:40] apptainer works
[2025-06-04 14:57:40] Set ATHENA_PROC_NUMBER=8
[2025-06-04 14:57:40] Set ATHENA_CORE_NUMBER=8
[2025-06-04 14:57:40] Starting ATLAS job with PandaID=6678213876
[2025-06-04 14:57:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:03:29]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:03:29] 2025-06-04 17:02:38,583 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:03:29] 2025-06-04 17:02:38,584 | INFO     | sum of square deviations: 3675146117.0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,586 | INFO     | sum of deviations: 88328597220.5
[2025-06-04 19:03:29] 2025-06-04 17:02:38,586 | INFO     | mean x: 1749049517.5
[2025-06-04 19:03:29] 2025-06-04 17:02:38,593 | INFO     | mean y: 2414050.1622807016
[2025-06-04 19:03:29] 2025-06-04 17:02:38,594 | INFO     | -- intersect: -42034306513.2306
[2025-06-04 19:03:29] 2025-06-04 17:02:38,594 | INFO     | intersect: -42034306513.2306
[2025-06-04 19:03:29] 2025-06-04 17:02:38,594 | INFO     | chi2: 6.407852445392755
[2025-06-04 19:03:29] 2025-06-04 17:02:38,595 | INFO     | sum of square deviations: 3438620752.0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,597 | INFO     | sum of deviations: 101112970052.99998
[2025-06-04 19:03:29] 2025-06-04 17:02:38,597 | INFO     | mean x: 1749049365.0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,597 | INFO     | mean y: 2422120.6278026905
[2025-06-04 19:03:29] 2025-06-04 17:02:38,597 | INFO     | -- intersect: -51428540704.104095
[2025-06-04 19:03:29] 2025-06-04 17:02:38,597 | INFO     | intersect: -51428540704.104095
[2025-06-04 19:03:29] 2025-06-04 17:02:38,598 | INFO     | chi2: 5.688482084180413
[2025-06-04 19:03:29] 2025-06-04 17:02:38,598 | INFO     | current chi2=5.688482084180413 (change=11.226387738212802 %)
[2025-06-04 19:03:29] 2025-06-04 17:02:38,598 | INFO     | right removable region: 222
[2025-06-04 19:03:29] 2025-06-04 17:02:38,598 | INFO     | sum of square deviations: 3438620752.0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,600 | INFO     | sum of deviations: 10804935611.999996
[2025-06-04 19:03:29] 2025-06-04 17:02:38,601 | INFO     | mean x: 1749049670.0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,601 | INFO     | mean y: 2463984.659192825
[2025-06-04 19:03:29] 2025-06-04 17:02:38,601 | INFO     | -- intersect: -5493451508.652482
[2025-06-04 19:03:29] 2025-06-04 17:02:38,601 | INFO     | intersect: -5493451508.652482
[2025-06-04 19:03:29] 2025-06-04 17:02:38,601 | INFO     | chi2: 1.71323511505864
[2025-06-04 19:03:29] 2025-06-04 17:02:38,601 | INFO     | current chi2=1.71323511505864 (change=73.26350552453098 %)
[2025-06-04 19:03:29] 2025-06-04 17:02:38,602 | INFO     | sum of square deviations: 3212467674.5
[2025-06-04 19:03:29] 2025-06-04 17:02:38,604 | INFO     | sum of deviations: -17674027394.0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,604 | INFO     | mean x: 1749049822.5
[2025-06-04 19:03:29] 2025-06-04 17:02:38,604 | INFO     | mean y: 2483034.908256881
[2025-06-04 19:03:29] 2025-06-04 17:02:38,604 | INFO     | -- intersect: 9625227170.737486
[2025-06-04 19:03:29] 2025-06-04 17:02:38,604 | INFO     | intersect: 9625227170.737486
[2025-06-04 19:03:29] 2025-06-04 17:02:38,605 | INFO     | chi2: 0.8571968731053831
[2025-06-04 19:03:29] 2025-06-04 17:02:38,605 | INFO     | current chi2=0.8571968731053831 (change=49.96618586842103 %)
[2025-06-04 19:03:29] 2025-06-04 17:02:38,605 | INFO     | sum of square deviations: 2996454322.0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,607 | INFO     | sum of deviations: -14229965076.0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,607 | INFO     | mean x: 1749049975.0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,607 | INFO     | mean y: 2480564.896713615
[2025-06-04 19:03:29] 2025-06-04 17:02:38,607 | INFO     | -- intersect: 8308604198.317037
[2025-06-04 19:03:29] 2025-06-04 17:02:38,608 | INFO     | intersect: 8308604198.317037
[2025-06-04 19:03:29] 2025-06-04 17:02:38,608 | INFO     | chi2: 0.835346908789101
[2025-06-04 19:03:29] 2025-06-04 17:02:38,608 | INFO     | current chi2=0.835346908789101 (change=2.549001868978568 %)
[2025-06-04 19:03:29] 2025-06-04 17:02:38,608 | INFO     | left removable region: 30
[2025-06-04 19:03:29] 2025-06-04 17:02:38,609 | INFO     | sum of square deviations: 2194675568.0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,631 | INFO     | sum of deviations: 4147849513.0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,632 | INFO     | mean x: 1749050249.5
[2025-06-04 19:03:29] 2025-06-04 17:02:38,632 | INFO     | mean y: 2487553.0833333335
[2025-06-04 19:03:29] 2025-06-04 17:02:38,632 | INFO     | -- intersect: -3303147836.211301
[2025-06-04 19:03:29] 2025-06-04 17:02:38,632 | INFO     | intersect: -3303147836.211301
[2025-06-04 19:03:29] 2025-06-04 17:02:38,632 | INFO     | chi2: 0.00032265604607628883
[2025-06-04 19:03:29] 2025-06-04 17:02:38,633 | INFO     | -- intersect: -3303147836.211301
[2025-06-04 19:03:29] 2025-06-04 17:02:38,633 | INFO     | current memory leak: 1.89 B/s (using 192 data points, chi2=0.00)
[2025-06-04 19:03:29] 2025-06-04 17:02:38,634 | INFO     | ..............................
[2025-06-04 19:03:29] 2025-06-04 17:02:38,634 | INFO     | . Timing measurements:
[2025-06-04 19:03:29] 2025-06-04 17:02:38,634 | INFO     | . get job = 0 s
[2025-06-04 19:03:29] 2025-06-04 17:02:38,634 | INFO     | . initial setup = 11 s
[2025-06-04 19:03:29] 2025-06-04 17:02:38,634 | INFO     | . payload setup = 180 s
[2025-06-04 19:03:29] 2025-06-04 17:02:38,634 | INFO     | . stage-in = 0 s
[2025-06-04 19:03:29] 2025-06-04 17:02:38,634 | INFO     | . payload execution = 14018 s
[2025-06-04 19:03:29] 2025-06-04 17:02:38,634 | INFO     | . stage-out = 3 s
[2025-06-04 19:03:29] 2025-06-04 17:02:38,634 | INFO     | . log creation = 0 s
[2025-06-04 19:03:29] 2025-06-04 17:02:38,635 | INFO     | ..............................
[2025-06-04 19:03:29] 2025-06-04 17:02:38,838 | INFO     | 
[2025-06-04 19:03:29] 2025-06-04 17:02:38,839 | INFO     | job summary report
[2025-06-04 19:03:29] 2025-06-04 17:02:38,839 | INFO     | --------------------------------------------------
[2025-06-04 19:03:29] 2025-06-04 17:02:38,839 | INFO     | PanDA job id: 6678213876
[2025-06-04 19:03:29] 2025-06-04 17:02:38,839 | INFO     | task id: 45006595
[2025-06-04 19:03:29] 2025-06-04 17:02:38,839 | INFO     | errors: (none)
[2025-06-04 19:03:29] 2025-06-04 17:02:38,839 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:03:29] 2025-06-04 17:02:38,839 | INFO     | pilot state: finished 
[2025-06-04 19:03:29] 2025-06-04 17:02:38,839 | INFO     | transexitcode: 0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,840 | INFO     | exeerrorcode: 0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,840 | INFO     | exeerrordiag: 
[2025-06-04 19:03:29] 2025-06-04 17:02:38,840 | INFO     | exitcode: 0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,840 | INFO     | exitmsg: OK
[2025-06-04 19:03:29] 2025-06-04 17:02:38,840 | INFO     | cpuconsumptiontime: 50697 s
[2025-06-04 19:03:29] 2025-06-04 17:02:38,840 | INFO     | nevents: 400
[2025-06-04 19:03:29] 2025-06-04 17:02:38,840 | INFO     | neventsw: 0
[2025-06-04 19:03:29] 2025-06-04 17:02:38,840 | INFO     | pid: 9946
[2025-06-04 19:03:29] 2025-06-04 17:02:38,840 | INFO     | pgrp: 9946
[2025-06-04 19:03:29] 2025-06-04 17:02:38,840 | INFO     | corecount: 8
[2025-06-04 19:03:29] 2025-06-04 17:02:38,840 | INFO     | event service: False
[2025-06-04 19:03:29] 2025-06-04 17:02:38,841 | INFO     | sizes: {0: 2397171, 1: 2397370, 12: 2397370, 23: 2397398, 33: 2397426, 44: 2397482, 55: 2397638, 66: 2397666, 76: 2397694, 87: 2397750, 91: 2397984, 98: 2398292, 1
[2025-06-04 19:03:29] 2025-06-04 17:02:38,841 | INFO     | --------------------------------------------------
[2025-06-04 19:03:29] 2025-06-04 17:02:38,841 | INFO     | 
[2025-06-04 19:03:29] 2025-06-04 17:02:38,841 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-04 19:03:29] 2025-06-04 17:02:39,319 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,319 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,319 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,319 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,320 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,320 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,320 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,320 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,320 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,321 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:03:29] 2025-06-04 17:02:39,321 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,321 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:03:29] 2025-06-04 17:02:39,321 | INFO     | job 6678213876 has completed (purged errors)
[2025-06-04 19:03:29] 2025-06-04 17:02:39,321 | INFO     | overall cleanup function is called
[2025-06-04 19:03:29] 2025-06-04 17:02:40,331 | INFO     | --- collectZombieJob: --- 10, [9946]
[2025-06-04 19:03:29] 2025-06-04 17:02:40,332 | INFO     | zombie collector waiting for pid 9946
[2025-06-04 19:03:29] 2025-06-04 17:02:40,332 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:03:29] 2025-06-04 17:02:40,332 | INFO     | collected zombie processes
[2025-06-04 19:03:29] 2025-06-04 17:02:40,332 | INFO     | will attempt to kill all subprocesses of pid=9946
[2025-06-04 19:03:29] 2025-06-04 17:02:40,461 | INFO     | process IDs to be killed: [9946] (in reverse order)
[2025-06-04 19:03:29] 2025-06-04 17:02:41,282 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:03:29] 2025-06-04 17:02:41,282 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:03:29] 2025-06-04 17:02:41,285 | INFO     | did not find any defunct processes belonging to 9946
[2025-06-04 19:03:29] 2025-06-04 17:02:41,289 | INFO     | did not find any defunct processes belonging to 9946
[2025-06-04 19:03:29] 2025-06-04 17:02:41,289 | INFO     | ready for new job
[2025-06-04 19:03:29] 2025-06-04 17:02:41,290 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:03:29] 2025-06-04 17:02:41,292 | INFO     | **************************************
[2025-06-04 19:03:29] 2025-06-04 17:02:41,292 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:03:29] 2025-06-04 17:02:41,292 | INFO     | **************************************
[2025-06-04 19:03:29] 2025-06-04 17:02:41,292 | INFO     | 
[2025-06-04 19:03:29] 2025-06-04 17:02:41,293 | INFO     | pilot is running in a VM
[2025-06-04 19:03:29] 2025-06-04 17:02:41,293 | INFO     | architecture information:
[2025-06-04 19:03:29] 2025-06-04 17:02:41,295 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:03:29] 2025-06-04 17:02:41,485 | INFO     | PID=3346 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 19:03:29] 2025-06-04 17:02:41,485 | INFO     | .. there are 9 such processes running
[2025-06-04 19:03:29] 2025-06-04 17:02:41,521 | INFO     | cat /etc/os-release:
[2025-06-04 19:03:29] NAME="CentOS Linux"
[2025-06-04 19:03:29] VERSION="7 (Core)"
[2025-06-04 19:03:29] ID="centos"
[2025-06-04 19:03:29] ID_LIKE="rhel fedora"
[2025-06-04 19:03:29] VERSION_ID="7"
[2025-06-04 19:03:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:03:29] ANSI_COLOR="0;31"
[2025-06-04 19:03:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:03:29] HOME_URL="https://www.centos.org/"
[2025-06-04 19:03:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:03:29] 
[2025-06-04 19:03:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:03:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:03:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:03:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:03:29] 
[2025-06-04 19:03:29] 2025-06-04 17:02:41,521 | INFO     | **************************************
[2025-06-04 19:03:29] 2025-06-04 17:02:42,024 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-04 19:03:29] 2025-06-04 17:02:42,181 | INFO     | sufficient remaining disk space (496829988864 B)
[2025-06-04 19:03:29] 2025-06-04 17:02:42,181 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:03:29] 2025-06-04 17:02:42,181 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:03:29] 2025-06-04 17:02:42,181 | INFO     | update_server=False
[2025-06-04 19:03:29] 2025-06-04 17:02:42,182 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:03:29] 2025-06-04 17:02:42,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:03:29] 2025-06-04 17:02:42,182 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:03:29] 2025-06-04 17:02:42,182 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:03:29] 2025-06-04 17:02:42,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:03:29] 2025-06-04 17:02:42,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:03:29] 2025-06-04 17:02:42,634 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 19:03:29] 2025-06-04 17:02:42,635 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 19:03:29] 2025-06-04 17:02:42,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:03:29] 2025-06-04 17:02:42,635 | INFO     | will abort loop
[2025-06-04 19:03:29] 2025-06-04 17:02:42,722 | INFO     | all data control threads have been joined
[2025-06-04 19:03:29] 2025-06-04 17:02:42,813 | INFO     | all payload control threads have been joined
[2025-06-04 19:03:29] 2025-06-04 17:02:43,187 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:43,497 | INFO     | all job control threads have been joined
[2025-06-04 19:03:29] 2025-06-04 17:02:43,640 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:43,694 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:43,728 | INFO     | [data] control thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:43,738 | INFO     | [job] validate thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:43,819 | INFO     | [payload] control thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:43,833 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:43,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:03:29] 2025-06-04 17:02:43,907 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:44,188 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:44,295 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:44,357 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:44,501 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:44,503 | INFO     | [job] control thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:44,859 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:45,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:03:29] 2025-06-04 17:02:49,646 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:52,337 | INFO     | job.realtimelogging is not enabled
[2025-06-04 19:03:29] 2025-06-04 17:02:53,343 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:03:29] 2025-06-04 17:02:53,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139680655329088)>', '<ExcThread(monitor, started 139680355956480)>']
[2025-06-04 19:03:29] 2025-06-04 17:02:54,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:03:29] 2025-06-04 17:02:54,252 | INFO     | [monitor] control thread has ended
[2025-06-04 19:03:29] 2025-06-04 17:02:58,401 | INFO     | all workflow threads have been joined
[2025-06-04 19:03:29] 2025-06-04 17:02:58,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:03:29] 2025-06-04 17:02:58,402 | INFO     | traces error code: 0
[2025-06-04 19:03:29] 2025-06-04 17:02:58,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:03:29] 2025-06-04 17:02:58,680 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:03:29] 2025-06-04 17:02:58,817 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:03:29] 2025-06-04 17:02:58,897 [wrapper] pilotpid: 3346
[2025-06-04 19:03:29] 2025-06-04 17:02:58,961 [wrapper] Pilot exit status: 0
[2025-06-04 19:03:29] 2025-06-04 17:02:59,273 [wrapper] pandaids: 6678213876
[2025-06-04 19:03:29] 2025-06-04 17:02:59,604 [wrapper] cleanup supervisor_pilot 16206 3347
[2025-06-04 19:03:29] 2025-06-04 17:02:59,667 [wrapper] Test setup, not cleaning
[2025-06-04 19:03:29] 2025-06-04 17:02:59,695 [wrapper] apfmon messages muted
[2025-06-04 19:03:29] 2025-06-04 17:02:59,777 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:03:29] 2025-06-04 17:02:59,894 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:03:29]  *** Error codes and diagnostics ***
[2025-06-04 19:03:29]     "exeErrorCode": 0,
[2025-06-04 19:03:29]     "exeErrorDiag": "",
[2025-06-04 19:03:29]     "pilotErrorCode": 0,
[2025-06-04 19:03:29]     "pilotErrorDiag": "",
[2025-06-04 19:03:29]  *** Listing of results directory ***
[2025-06-04 19:03:29] total 389076
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:58 pilot3.tar.gz
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc      5111 Jun  4 02:00 queuedata.json
[2025-06-04 19:03:29] -rwx------. 1 boinc boinc     37140 Jun  4 02:01 runpilot2-wrapper.sh
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc       100 Jun  4 14:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:03:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 14:40 run_atlas
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc       105 Jun  4 14:40 job.xml
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc      6392 Jun  4 14:40 init_data.xml
[2025-06-04 19:03:29] -rw-r--r--. 2 boinc boinc 212907999 Jun  4 14:40 EVNT.45006593._001954.pool.root.1
[2025-06-04 19:03:29] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:40 start_atlas.sh
[2025-06-04 19:03:29] drwxrwx--x. 2 boinc boinc        68 Jun  4 14:40 shared
[2025-06-04 19:03:29] -rw-r--r--. 2 boinc boinc    508882 Jun  4 14:40 input.tar.gz
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc         0 Jun  4 14:40 boinc_lockfile
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc      2525 Jun  4 14:57 pandaJob.out
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc    986811 Jun  4 15:01 agis_schedconf.cvmfs.json
[2025-06-04 19:03:29] drwx------. 4 boinc boinc      4096 Jun  4 15:01 pilot3
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc 178426763 Jun  4 19:00 HITS.45006595._048716.pool.root.1
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc       531 Jun  4 19:00 boinc_task_state.xml
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc      1019 Jun  4 19:01 memory_monitor_summary.json
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc   1598969 Jun  4 19:01 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc    388159 Jun  4 19:01 log.45006595._048716.job.log.tgz.1
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc        95 Jun  4 19:01 pilot_heartbeat.json
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc      7692 Jun  4 19:02 heartbeat.json
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc      5188 Jun  4 19:02 pilotlog.txt
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc   1238240 Jun  4 19:02 log.45006595._048716.job.log.1
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc       357 Jun  4 19:03 output.list
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc       620 Jun  4 19:03 runtime_log
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc   1648640 Jun  4 19:03 result.tar.gz
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc      8659 Jun  4 19:03 runtime_log.err
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc       656 Jun  4 19:03 ftIODmWkqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0amKDm9xN14n.diag
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc      8192 Jun  4 19:03 boinc_mmap_file
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc        28 Jun  4 19:03 wrapper_checkpoint.txt
[2025-06-04 19:03:29] -rw-r--r--. 1 boinc boinc     20622 Jun  4 19:03 stderr.txt
[2025-06-04 19:03:29] HITS file was successfully produced:
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc 178426763 Jun  4 19:00 shared/HITS.pool.root.1
[2025-06-04 19:03:29]  *** Contents of shared directory: ***
[2025-06-04 19:03:29] total 384296
[2025-06-04 19:03:29] -rw-r--r--. 2 boinc boinc 212907999 Jun  4 14:40 ATLAS.root_0
[2025-06-04 19:03:29] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:40 start_atlas.sh
[2025-06-04 19:03:29] -rw-r--r--. 2 boinc boinc    508882 Jun  4 14:40 input.tar.gz
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc 178426763 Jun  4 19:00 HITS.pool.root.1
[2025-06-04 19:03:29] -rw-------. 1 boinc boinc   1648640 Jun  4 19:03 result.tar.gz
19:03:30 (20260): run_atlas exited; CPU time 50896.376392
19:03:30 (20260): called boinc_finish(0)

</stderr_txt>
]]>

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