Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 11:59:32 (1718378): Detected: vboxwrapper 26206
2025-06-04 11:59:32 (1718378): Detected: BOINC client v8.2.2
2025-06-04 11:59:32 (1718378): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-06-04 11:59:32 (1718378): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 11:59:32 (1718378): Create VM. (boinc_1adef44bab60d69f, slot#2)
2025-06-04 11:59:32 (1718378): Setting Memory Size for VM. (4800MB)
2025-06-04 11:59:32 (1718378): Setting CPU Count for VM. (8)
2025-06-04 11:59:32 (1718378): Setting Chipset Options for VM.
2025-06-04 11:59:33 (1718378): Setting Graphics Controller Options for VM.
2025-06-04 11:59:33 (1718378): Setting Boot Options for VM.
2025-06-04 11:59:33 (1718378): Setting Network Configuration for NAT.
2025-06-04 11:59:33 (1718378): Enabling VM Network Access.
2025-06-04 11:59:33 (1718378): Disabling USB Support for VM.
2025-06-04 11:59:33 (1718378): Disabling COM Port Support for VM.
2025-06-04 11:59:33 (1718378): Disabling LPT Port Support for VM.
2025-06-04 11:59:33 (1718378): Disabling Audio Support for VM.
2025-06-04 11:59:33 (1718378): Disabling Clipboard Support for VM.
2025-06-04 11:59:33 (1718378): Disabling Drag and Drop Support for VM.
2025-06-04 11:59:33 (1718378): Adding storage controller(s) to VM.
2025-06-04 11:59:33 (1718378): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 11:59:33 (1718378): Adding VirtualBox Guest Additions to VM.
2025-06-04 11:59:34 (1718378): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 11:59:34 (1718378): forwarding host port 46431 to guest port 80
2025-06-04 11:59:34 (1718378): Enabling remote desktop for VM.
2025-06-04 11:59:34 (1718378): Required extension pack not installed, remote desktop not enabled.
2025-06-04 11:59:34 (1718378): Enabling shared directory for VM.
2025-06-04 11:59:34 (1718378): Starting VM using VBoxManage interface. (boinc_1adef44bab60d69f, slot#2)
2025-06-04 11:59:35 (1718378): Successfully started VM. (PID = '1718897')
2025-06-04 11:59:35 (1718378): Reporting VM Process ID to BOINC.
2025-06-04 11:59:35 (1718378): Guest Log: BIOS: VirtualBox 7.1.8
2025-06-04 11:59:35 (1718378): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 11:59:35 (1718378): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 11:59:35 (1718378): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 11:59:35 (1718378): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 11:59:35 (1718378): Detected: Web Application Enabled (http://localhost:46431)
2025-06-04 11:59:35 (1718378): Preference change detected
2025-06-04 11:59:35 (1718378): Setting CPU throttle for VM. (100%)
2025-06-04 11:59:35 (1718378): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 11:59:37 (1718378): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 11:59:37 (1718378): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 11:59:40 (1718378): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 11:59:40 (1718378): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 11:59:40 (1718378): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 11:59:48 (1718378): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 11:59:48 (1718378): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 11:59:54 (1718378): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 11:59:54 (1718378): Guest Log: 00:00:00.000182 main     Log opened 2025-06-04T04:59:52.811168000Z
2025-06-04 11:59:54 (1718378): Guest Log: 00:00:00.000302 main     OS Product: Linux
2025-06-04 11:59:54 (1718378): Guest Log: 00:00:00.000516 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 11:59:54 (1718378): Guest Log: 00:00:00.000547 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 11:59:54 (1718378): Guest Log: 00:00:00.000569 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 11:59:54 (1718378): Guest Log: 00:00:00.000570 main     Process ID: 1377
2025-06-04 11:59:54 (1718378): Guest Log: 00:00:00.000571 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 11:59:54 (1718378): Guest Log: 00:00:00.001313 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 11:59:54 (1718378): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 11:59:54 (1718378): Guest Log: [INFO] Mounting shared directory
2025-06-04 11:59:54 (1718378): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 12:00:03 (1718378): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 12:00:03 (1718378): Guest Log: [INFO] Detected branch: prod
2025-06-04 12:00:04 (1718378): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 12:00:04 (1718378): Guest Log: Copying input files
2025-06-04 12:00:05 (1718378): Guest Log: Copied input files into RunAtlas.
2025-06-04 12:00:05 (1718378): Guest Log: Detected user-configured HTTP proxy at http://192.168.11.114:3128 - will set in /etc/cvmfs/default.local
2025-06-04 12:00:18 (1718378): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 12:00:18 (1718378): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 12:00:18 (1718378): Guest Log: 2.6.3.0 1655 0 31632 146768 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.11.114:3128 1
2025-06-04 12:00:19 (1718378): Guest Log: copied the webapp to /var/www
2025-06-04 12:00:19 (1718378): Guest Log: ATHENA_PROC_NUMBER=8
2025-06-04 12:00:19 (1718378): Guest Log: ATHENA_CORE_NUMBER=8
2025-06-04 12:00:19 (1718378): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 12:00:19 (1718378): Guest Log:  *** Starting ATLAS job. (PandaID=6678213730 taskID=45006595) ***
2025-06-04 12:08:33 (1718378): Guest Log:  *** Job finished ***
2025-06-04 12:08:33 (1718378): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:20,738 | INFO     | [payload] validate_post thread has finished
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:21,918 | INFO     | [data] copytool_out thread has finished
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:23,456 | INFO     | [data] queue_monitor thread has finished
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:23,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139838058358592)>', '<ExcThread(monitor, started 139837441021696)>']
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:24,750 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:24,750 | INFO     | [monitor] control thread has ended
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,004 | INFO     | all workflow threads have been joined
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,004 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,004 | INFO     | traces error code: 0
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,004 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,088 [wrapper] ==== pilot stdout END ====
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,095 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,103 [wrapper] pilotpid: 6001
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,109 [wrapper] Pilot exit status: 0
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,131 [wrapper] pandaids: 6678213730
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,169 [wrapper] cleanup supervisor_pilot  6007 6002
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,175 [wrapper] Test setup, not cleaning
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,181 [wrapper] apfmon messages muted
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,187 [wrapper] ==== wrapper stdout END ====
2025-06-04 12:08:33 (1718378): Guest Log: 2025-06-04 05:08:29,193 [wrapper] ==== wrapper stderr END ====
2025-06-04 12:08:33 (1718378): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 12:08:33 (1718378): Guest Log:     "exeErrorCode": 65,
2025-06-04 12:08:33 (1718378): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
2025-06-04 12:08:33 (1718378): Guest Log:     "pilotErrorCode": 1305,
2025-06-04 12:08:33 (1718378): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
2025-06-04 12:08:33 (1718378): Guest Log:  *** Listing of results directory ***
2025-06-04 12:08:33 (1718378): Guest Log: total 3976
2025-06-04 12:08:33 (1718378): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Jun  3 23:42 pilot3.tar.gz
2025-06-04 12:08:33 (1718378): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Jun  3 23:50 queuedata.json
2025-06-04 12:08:33 (1718378): Guest Log: -rwx------. 1 atlas atlas   37140 Jun  3 23:50 runpilot2-wrapper.sh
2025-06-04 12:08:33 (1718378): Guest Log: -rw-r--r--. 1 atlas atlas   15093 Jun  4 05:00 start_atlas.sh
2025-06-04 12:08:33 (1718378): Guest Log: -rw-r--r--. 1 atlas atlas    6983 Jun  4 05:00 init_data.xml
2025-06-04 12:08:33 (1718378): Guest Log: -rw-r--r--. 1 atlas atlas  508881 Jun  4 05:00 input.tar.gz
2025-06-04 12:08:33 (1718378): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Jun  4 05:00 EVNT.45006593._001948.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 12:08:33 (1718378): Guest Log: -rw-r--r--. 1 atlas atlas    2525 Jun  4 05:00 pandaJob.out
2025-06-04 12:08:33 (1718378): Guest Log: -rw-------. 1 atlas atlas  986745 Jun  4 05:00 agis_schedconf.cvmfs.json
2025-06-04 12:08:33 (1718378): Guest Log: -rw-------. 1 atlas atlas 1603667 Jun  4 05:00 agis_ddmendpoints.agis.ALL.json
2025-06-04 12:08:33 (1718378): Guest Log: drwx------. 4 atlas atlas    4096 Jun  4 05:00 pilot3
2025-06-04 12:08:33 (1718378): Guest Log: -rw-------. 1 atlas atlas    1020 Jun  4 05:06 memory_monitor_summary.json
2025-06-04 12:08:33 (1718378): Guest Log: -rw-------. 1 atlas atlas   56601 Jun  4 05:06 log.45006595._048570.job.log.tgz.1
2025-06-04 12:08:33 (1718378): Guest Log: -rw-------. 1 atlas atlas      95 Jun  4 05:07 pilot_heartbeat.json
2025-06-04 12:08:33 (1718378): Guest Log: -rw-------. 1 atlas atlas   11019 Jun  4 05:08 heartbeat.json
2025-06-04 12:08:33 (1718378): Guest Log: -rw-------. 1 atlas atlas    4536 Jun  4 05:08 pilotlog.txt
2025-06-04 12:08:33 (1718378): Guest Log: -rw-------. 1 atlas atlas   94677 Jun  4 05:08 log.45006595._048570.job.log.1
2025-06-04 12:08:33 (1718378): Guest Log: -rw-------. 1 atlas atlas     188 Jun  4 05:08 output.list
2025-06-04 12:08:33 (1718378): Guest Log: -rw-r--r--. 1 atlas atlas     620 Jun  4 05:08 runtime_log
2025-06-04 12:08:33 (1718378): Guest Log: -rw-------. 1 atlas atlas  174080 Jun  4 05:08 result.tar.gz
2025-06-04 12:08:33 (1718378): Guest Log: -rw-r--r--. 1 atlas atlas    8420 Jun  4 05:08 runtime_log.err
2025-06-04 12:08:33 (1718378): Guest Log: -rw-------. 1 atlas atlas     640 Jun  4 05:08 Dh1NDm5Zqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVZmKDmh0Bgvm.diag
2025-06-04 12:08:33 (1718378): Guest Log: Looking for outputfile HITS.45006595._048570.pool.root.1
2025-06-04 12:08:33 (1718378): Guest Log: No HITS file was produced
2025-06-04 12:08:33 (1718378): Guest Log: Successfully finished the ATLAS job!
2025-06-04 12:08:33 (1718378): Guest Log: Copying the results back to the shared directory!
2025-06-04 12:08:34 (1718378): Guest Log:  *** Contents of shared directory: ***
2025-06-04 12:08:34 (1718378): Guest Log: total 211264
2025-06-04 12:08:34 (1718378): Guest Log: -rw-r--r--. 1 root root 215613929 Jun  4 04:59 ATLAS.root_0
2025-06-04 12:08:34 (1718378): Guest Log: -rw-r--r--. 1 root root      6983 Jun  4 04:59 init_data.xml
2025-06-04 12:08:34 (1718378): Guest Log: -rw-r--r--. 1 root root    508881 Jun  4 04:59 input.tar.gz
2025-06-04 12:08:34 (1718378): Guest Log: -rw-r--r--. 1 root root    174080 Jun  4  2025 result.tar.gz
2025-06-04 12:08:34 (1718378): Guest Log: -rw-r--r--. 1 root root     15093 Jun  4 04:59 start_atlas.sh
2025-06-04 12:08:34 (1718378): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 12:08:34 (1718378): VM Completion File Detected.
2025-06-04 12:08:34 (1718378): Powering off VM.
2025-06-04 12:08:34 (1718378): Successfully stopped VM.
2025-06-04 12:08:34 (1718378): Deregistering VM. (boinc_1adef44bab60d69f, slot#2)
2025-06-04 12:08:34 (1718378): Removing network bandwidth throttle group from VM.
2025-06-04 12:08:34 (1718378): Removing VM from VirtualBox.
12:08:39 (1718378): called boinc_finish(0)

</stderr_txt>
]]>

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