Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:54:17 (5219): wrapper (7.7.26015): starting
14:54:17 (5219): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 14:54:17] Arguments: --nthreads 8
[2025-06-04 14:54:17] Threads: 8
[2025-06-04 14:54:17] Checking for CVMFS
[2025-06-04 14:54:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:54:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:54:18] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:54:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:54:19] 2.11.2.0 19466 33234 89888 146780 1 59 14824224 25165824 3909 130560 0 17263458 99.836 18490435 2000 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 14:54:19] CVMFS is ok
[2025-06-04 14:54:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:54:19] Checking for apptainer binary...
[2025-06-04 14:54:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:54:19] Running /usr/bin/apptainer --version
[2025-06-04 14:54:19] apptainer version 1.3.2-1.el7
[2025-06-04 14:54:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:24:52] cg-vwn426.simple-grid.lan
[2025-06-04 15:24:52] apptainer works
[2025-06-04 15:24:52] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:24:52] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:24:52] Starting ATLAS job with PandaID=6678213719
[2025-06-04 15:24:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 19:31:11]  *** The last 200 lines of the pilot log: ***
[2025-06-04 19:31:11] 2025-06-04 17:28:41,651 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 19:31:11] 2025-06-04 17:28:41,651 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 19:31:11] 2025-06-04 17:28:41,651 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 19:31:11] 2025-06-04 17:28:41,656 | INFO     | fitting pss+swap vs Time
[2025-06-04 19:31:11] 2025-06-04 17:28:41,657 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 19:31:11] 2025-06-04 17:28:41,659 | INFO     | sum of deviations: 56811970946.00005
[2025-06-04 19:31:11] 2025-06-04 17:28:41,659 | INFO     | mean x: 1749051086.0
[2025-06-04 19:31:11] 2025-06-04 17:28:41,659 | INFO     | mean y: 2459669.9162995596
[2025-06-04 19:31:11] 2025-06-04 17:28:41,659 | INFO     | -- intersect: -27394021387.719955
[2025-06-04 19:31:11] 2025-06-04 17:28:41,659 | INFO     | intersect: -27394021387.719955
[2025-06-04 19:31:11] 2025-06-04 17:28:41,676 | INFO     | chi2: 7.740824775728958
[2025-06-04 19:31:11] 2025-06-04 17:28:41,676 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 19:31:11] 2025-06-04 17:28:41,678 | INFO     | sum of deviations: 70682545738.0
[2025-06-04 19:31:11] 2025-06-04 17:28:41,678 | INFO     | mean x: 1749050933.5
[2025-06-04 19:31:11] 2025-06-04 17:28:41,679 | INFO     | mean y: 2468517.720720721
[2025-06-04 19:31:11] 2025-06-04 17:28:41,679 | INFO     | -- intersect: -36438180588.59582
[2025-06-04 19:31:11] 2025-06-04 17:28:41,679 | INFO     | intersect: -36438180588.59582
[2025-06-04 19:31:11] 2025-06-04 17:28:41,679 | INFO     | chi2: 7.044087015226756
[2025-06-04 19:31:11] 2025-06-04 17:28:41,679 | INFO     | current chi2=7.044087015226756 (change=9.000820722448017 %)
[2025-06-04 19:31:11] 2025-06-04 17:28:41,679 | INFO     | right removable region: 221
[2025-06-04 19:31:11] 2025-06-04 17:28:41,680 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 19:31:11] 2025-06-04 17:28:41,681 | INFO     | sum of deviations: -23284871596.5
[2025-06-04 19:31:11] 2025-06-04 17:28:41,682 | INFO     | mean x: 1749051238.5
[2025-06-04 19:31:11] 2025-06-04 17:28:41,682 | INFO     | mean y: 2511733.9954954954
[2025-06-04 19:31:11] 2025-06-04 17:28:41,682 | INFO     | -- intersect: 12007115903.790575
[2025-06-04 19:31:11] 2025-06-04 17:28:41,682 | INFO     | intersect: 12007115903.790575
[2025-06-04 19:31:11] 2025-06-04 17:28:41,682 | INFO     | chi2: 2.681721399537591
[2025-06-04 19:31:11] 2025-06-04 17:28:41,682 | INFO     | current chi2=2.681721399537591 (change=65.35612835539155 %)
[2025-06-04 19:31:11] 2025-06-04 17:28:41,683 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 19:31:11] 2025-06-04 17:28:41,684 | INFO     | sum of deviations: -66059811042.000015
[2025-06-04 19:31:11] 2025-06-04 17:28:41,685 | INFO     | mean x: 1749051391.0
[2025-06-04 19:31:11] 2025-06-04 17:28:41,685 | INFO     | mean y: 2540693.248847926
[2025-06-04 19:31:11] 2025-06-04 17:28:41,685 | INFO     | -- intersect: 36468823415.1266
[2025-06-04 19:31:11] 2025-06-04 17:28:41,685 | INFO     | intersect: 36468823415.1266
[2025-06-04 19:31:11] 2025-06-04 17:28:41,685 | INFO     | chi2: 1.067562178826337
[2025-06-04 19:31:11] 2025-06-04 17:28:41,685 | INFO     | current chi2=1.067562178826337 (change=60.19116008805327 %)
[2025-06-04 19:31:11] 2025-06-04 17:28:41,686 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 19:31:11] 2025-06-04 17:28:41,687 | INFO     | sum of deviations: -69626046478.0
[2025-06-04 19:31:11] 2025-06-04 17:28:41,687 | INFO     | mean x: 1749051543.5
[2025-06-04 19:31:11] 2025-06-04 17:28:41,688 | INFO     | mean y: 2543193.0
[2025-06-04 19:31:11] 2025-06-04 17:28:41,688 | INFO     | -- intersect: 41221595279.02219
[2025-06-04 19:31:11] 2025-06-04 17:28:41,688 | INFO     | intersect: 41221595279.02219
[2025-06-04 19:31:11] 2025-06-04 17:28:41,688 | INFO     | chi2: 1.0135780397479042
[2025-06-04 19:31:11] 2025-06-04 17:28:41,688 | INFO     | current chi2=1.0135780397479042 (change=5.056767666477489 %)
[2025-06-04 19:31:11] 2025-06-04 17:28:41,688 | INFO     | left removable region: 30
[2025-06-04 19:31:11] 2025-06-04 17:28:41,689 | INFO     | sum of square deviations: 2160561440.0
[2025-06-04 19:31:11] 2025-06-04 17:28:41,690 | INFO     | sum of deviations: -35415493765.0
[2025-06-04 19:31:11] 2025-06-04 17:28:41,690 | INFO     | mean x: 1749051818.0
[2025-06-04 19:31:11] 2025-06-04 17:28:41,690 | INFO     | mean y: 2539633.1884816755
[2025-06-04 19:31:11] 2025-06-04 17:28:41,690 | INFO     | -- intersect: 28672649451.977486
[2025-06-04 19:31:11] 2025-06-04 17:28:41,690 | INFO     | intersect: 28672649451.977486
[2025-06-04 19:31:11] 2025-06-04 17:28:41,691 | INFO     | chi2: 0.19833268435946025
[2025-06-04 19:31:11] 2025-06-04 17:28:41,691 | INFO     | -- intersect: 28672649451.977486
[2025-06-04 19:31:11] 2025-06-04 17:28:41,691 | INFO     | current memory leak: -16.39 B/s (using 191 data points, chi2=0.20)
[2025-06-04 19:31:11] 2025-06-04 17:28:41,692 | INFO     | ..............................
[2025-06-04 19:31:11] 2025-06-04 17:28:41,692 | INFO     | . Timing measurements:
[2025-06-04 19:31:11] 2025-06-04 17:28:41,692 | INFO     | . get job = 0 s
[2025-06-04 19:31:11] 2025-06-04 17:28:41,692 | INFO     | . initial setup = 9 s
[2025-06-04 19:31:11] 2025-06-04 17:28:41,692 | INFO     | . payload setup = 164 s
[2025-06-04 19:31:11] 2025-06-04 17:28:41,692 | INFO     | . stage-in = 0 s
[2025-06-04 19:31:11] 2025-06-04 17:28:41,692 | INFO     | . payload execution = 13973 s
[2025-06-04 19:31:11] 2025-06-04 17:28:41,692 | INFO     | . stage-out = 3 s
[2025-06-04 19:31:11] 2025-06-04 17:28:41,693 | INFO     | . log creation = 1 s
[2025-06-04 19:31:11] 2025-06-04 17:28:41,693 | INFO     | ..............................
[2025-06-04 19:31:11] 2025-06-04 17:28:42,119 | INFO     | 
[2025-06-04 19:31:11] 2025-06-04 17:28:42,160 | INFO     | job summary report
[2025-06-04 19:31:11] 2025-06-04 17:28:42,160 | INFO     | --------------------------------------------------
[2025-06-04 19:31:11] 2025-06-04 17:28:42,160 | INFO     | PanDA job id: 6678213719
[2025-06-04 19:31:11] 2025-06-04 17:28:42,160 | INFO     | task id: 45006595
[2025-06-04 19:31:11] 2025-06-04 17:28:42,160 | INFO     | errors: (none)
[2025-06-04 19:31:11] 2025-06-04 17:28:42,160 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 19:31:11] 2025-06-04 17:28:42,160 | INFO     | pilot state: finished 
[2025-06-04 19:31:11] 2025-06-04 17:28:42,160 | INFO     | transexitcode: 0
[2025-06-04 19:31:11] 2025-06-04 17:28:42,161 | INFO     | exeerrorcode: 0
[2025-06-04 19:31:11] 2025-06-04 17:28:42,161 | INFO     | exeerrordiag: 
[2025-06-04 19:31:11] 2025-06-04 17:28:42,161 | INFO     | exitcode: 0
[2025-06-04 19:31:11] 2025-06-04 17:28:42,161 | INFO     | exitmsg: OK
[2025-06-04 19:31:11] 2025-06-04 17:28:42,161 | INFO     | cpuconsumptiontime: 50668 s
[2025-06-04 19:31:11] 2025-06-04 17:28:42,161 | INFO     | nevents: 400
[2025-06-04 19:31:11] 2025-06-04 17:28:42,161 | INFO     | neventsw: 0
[2025-06-04 19:31:11] 2025-06-04 17:28:42,161 | INFO     | pid: 3434
[2025-06-04 19:31:11] 2025-06-04 17:28:42,161 | INFO     | pgrp: 3434
[2025-06-04 19:31:11] 2025-06-04 17:28:42,161 | INFO     | corecount: 8
[2025-06-04 19:31:11] 2025-06-04 17:28:42,161 | INFO     | event service: False
[2025-06-04 19:31:11] 2025-06-04 17:28:42,161 | INFO     | sizes: {0: 2397171, 1: 2397370, 12: 2397370, 23: 2397398, 33: 2397426, 44: 2397482, 55: 2397638, 66: 2397666, 76: 2397694, 87: 2397750, 92: 2397984, 98: 2398292, 1
[2025-06-04 19:31:11] 2025-06-04 17:28:42,162 | INFO     | --------------------------------------------------
[2025-06-04 19:31:11] 2025-06-04 17:28:42,162 | INFO     | 
[2025-06-04 19:31:11] 2025-06-04 17:28:42,162 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-04 19:31:11] 2025-06-04 17:28:42,174 | INFO     | PID=29234 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 19:31:11] 2025-06-04 17:28:42,174 | INFO     | .. there are 9 such processes running
[2025-06-04 19:31:11] 2025-06-04 17:28:42,655 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,655 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,655 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,655 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,656 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,656 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,656 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,656 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,656 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,656 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,657 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,657 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,657 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 19:31:11] 2025-06-04 17:28:42,657 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,657 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 19:31:11] 2025-06-04 17:28:42,657 | INFO     | job 6678213719 has completed (purged errors)
[2025-06-04 19:31:11] 2025-06-04 17:28:42,657 | INFO     | overall cleanup function is called
[2025-06-04 19:31:11] 2025-06-04 17:28:43,666 | INFO     | --- collectZombieJob: --- 10, [3434]
[2025-06-04 19:31:11] 2025-06-04 17:28:43,667 | INFO     | zombie collector waiting for pid 3434
[2025-06-04 19:31:11] 2025-06-04 17:28:43,667 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 19:31:11] 2025-06-04 17:28:43,667 | INFO     | collected zombie processes
[2025-06-04 19:31:11] 2025-06-04 17:28:43,667 | INFO     | will attempt to kill all subprocesses of pid=3434
[2025-06-04 19:31:11] 2025-06-04 17:28:43,775 | INFO     | process IDs to be killed: [3434] (in reverse order)
[2025-06-04 19:31:11] 2025-06-04 17:28:44,231 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 19:31:11] 2025-06-04 17:28:44,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 19:31:11] 2025-06-04 17:28:44,235 | INFO     | did not find any defunct processes belonging to 3434
[2025-06-04 19:31:11] 2025-06-04 17:28:44,238 | INFO     | did not find any defunct processes belonging to 3434
[2025-06-04 19:31:11] 2025-06-04 17:28:44,238 | INFO     | ready for new job
[2025-06-04 19:31:11] 2025-06-04 17:28:44,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 19:31:11] 2025-06-04 17:28:44,240 | INFO     | **************************************
[2025-06-04 19:31:11] 2025-06-04 17:28:44,241 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 19:31:11] 2025-06-04 17:28:44,241 | INFO     | **************************************
[2025-06-04 19:31:11] 2025-06-04 17:28:44,241 | INFO     | 
[2025-06-04 19:31:11] 2025-06-04 17:28:44,241 | INFO     | pilot is running in a VM
[2025-06-04 19:31:11] 2025-06-04 17:28:44,241 | INFO     | architecture information:
[2025-06-04 19:31:11] 2025-06-04 17:28:44,249 | INFO     | executing command: cat /etc/os-release
[2025-06-04 19:31:11] 2025-06-04 17:28:44,404 | INFO     | cat /etc/os-release:
[2025-06-04 19:31:11] NAME="CentOS Linux"
[2025-06-04 19:31:11] VERSION="7 (Core)"
[2025-06-04 19:31:11] ID="centos"
[2025-06-04 19:31:11] ID_LIKE="rhel fedora"
[2025-06-04 19:31:11] VERSION_ID="7"
[2025-06-04 19:31:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 19:31:11] ANSI_COLOR="0;31"
[2025-06-04 19:31:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 19:31:11] HOME_URL="https://www.centos.org/"
[2025-06-04 19:31:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 19:31:11] 
[2025-06-04 19:31:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 19:31:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 19:31:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 19:31:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 19:31:11] 
[2025-06-04 19:31:11] 2025-06-04 17:28:44,404 | INFO     | **************************************
[2025-06-04 19:31:11] 2025-06-04 17:28:44,908 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-04 19:31:11] 2025-06-04 17:28:45,069 | INFO     | sufficient remaining disk space (496334012416 B)
[2025-06-04 19:31:11] 2025-06-04 17:28:45,069 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 19:31:11] 2025-06-04 17:28:45,070 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 19:31:11] 2025-06-04 17:28:45,070 | INFO     | update_server=False
[2025-06-04 19:31:11] 2025-06-04 17:28:45,070 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 19:31:11] 2025-06-04 17:28:45,071 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 19:31:11] 2025-06-04 17:28:45,071 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 19:31:11] 2025-06-04 17:28:45,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 19:31:11] 2025-06-04 17:28:45,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 19:31:11] 2025-06-04 17:28:45,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 19:31:11] 2025-06-04 17:28:45,613 | INFO     | all job control threads have been joined
[2025-06-04 19:31:11] 2025-06-04 17:28:45,631 | INFO     | all payload control threads have been joined
[2025-06-04 19:31:11] 2025-06-04 17:28:45,885 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:31:11] 2025-06-04 17:28:45,885 | INFO     | aborting loop
[2025-06-04 19:31:11] 2025-06-04 17:28:46,079 | INFO     | [job] retrieve thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:46,123 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:46,127 | INFO     | all data control threads have been joined
[2025-06-04 19:31:11] 2025-06-04 17:28:46,213 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:46,278 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:46,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:46,620 | INFO     | [job] control thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:46,636 | INFO     | [payload] control thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:46,645 | INFO     | [job] validate thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:46,851 | INFO     | [payload] failed_post thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:46,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 19:31:11] 2025-06-04 17:28:46,891 | INFO     | [job] job monitor thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:46,994 | INFO     | [data] copytool_in thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:47,133 | INFO     | [data] control thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:47,260 | INFO     | [payload] validate_post thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:47,404 | INFO     | [data] copytool_out thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:47,877 | INFO     | [job] queue monitor thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:47,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 19:31:11] 2025-06-04 17:28:51,971 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 19:31:11] 2025-06-04 17:28:53,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139807216830272)>', '<ExcThread(monitor, started 139806461904640)>']
[2025-06-04 19:31:11] 2025-06-04 17:28:54,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 19:31:11] 2025-06-04 17:28:54,128 | INFO     | [monitor] control thread has ended
[2025-06-04 19:31:11] 2025-06-04 17:28:58,420 | INFO     | all workflow threads have been joined
[2025-06-04 19:31:11] 2025-06-04 17:28:58,420 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 19:31:11] 2025-06-04 17:28:58,420 | INFO     | traces error code: 0
[2025-06-04 19:31:11] 2025-06-04 17:28:58,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 19:31:11] 2025-06-04 17:28:58,757 [wrapper] ==== pilot stdout END ====
[2025-06-04 19:31:11] 2025-06-04 17:28:58,806 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 19:31:11] 2025-06-04 17:28:58,876 [wrapper] pilotpid: 29234
[2025-06-04 19:31:11] 2025-06-04 17:28:58,921 [wrapper] Pilot exit status: 0
[2025-06-04 19:31:11] 2025-06-04 17:28:59,224 [wrapper] pandaids: 6678213719
[2025-06-04 19:31:11] 2025-06-04 17:28:59,671 [wrapper] cleanup supervisor_pilot  8683 29235
[2025-06-04 19:31:11] 2025-06-04 17:28:59,768 [wrapper] Test setup, not cleaning
[2025-06-04 19:31:11] 2025-06-04 17:28:59,878 [wrapper] apfmon messages muted
[2025-06-04 19:31:11] 2025-06-04 17:28:59,953 [wrapper] ==== wrapper stdout END ====
[2025-06-04 19:31:11] 2025-06-04 17:29:00,063 [wrapper] ==== wrapper stderr END ====
[2025-06-04 19:31:11]  *** Error codes and diagnostics ***
[2025-06-04 19:31:11]     "exeErrorCode": 0,
[2025-06-04 19:31:11]     "exeErrorDiag": "",
[2025-06-04 19:31:11]     "pilotErrorCode": 0,
[2025-06-04 19:31:11]     "pilotErrorDiag": "",
[2025-06-04 19:31:11]  *** Listing of results directory ***
[2025-06-04 19:31:11] total 395992
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:42 pilot3.tar.gz
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc      5111 Jun  4 01:50 queuedata.json
[2025-06-04 19:31:11] -rwx------. 1 boinc boinc     37140 Jun  4 01:50 runpilot2-wrapper.sh
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc       100 Jun  4 14:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 19:31:11] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 14:54 run_atlas
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc       105 Jun  4 14:54 job.xml
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc      6391 Jun  4 14:54 init_data.xml
[2025-06-04 19:31:11] -rw-r--r--. 2 boinc boinc 215613929 Jun  4 14:54 EVNT.45006593._001948.pool.root.1
[2025-06-04 19:31:11] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:54 start_atlas.sh
[2025-06-04 19:31:11] drwxrwx--x. 2 boinc boinc        68 Jun  4 14:54 shared
[2025-06-04 19:31:11] -rw-r--r--. 2 boinc boinc    508880 Jun  4 14:54 input.tar.gz
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc         0 Jun  4 14:54 boinc_lockfile
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc      2525 Jun  4 15:24 pandaJob.out
[2025-06-04 19:31:11] -rw-------. 1 boinc boinc    986819 Jun  4 15:27 agis_schedconf.cvmfs.json
[2025-06-04 19:31:11] drwx------. 4 boinc boinc      4096 Jun  4 15:28 pilot3
[2025-06-04 19:31:11] -rw-------. 1 boinc boinc 182842662 Jun  4 19:26 HITS.45006595._048559.pool.root.1
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc       530 Jun  4 19:26 boinc_task_state.xml
[2025-06-04 19:31:11] -rw-------. 1 boinc boinc      1017 Jun  4 19:26 memory_monitor_summary.json
[2025-06-04 19:31:11] -rw-------. 1 boinc boinc   1598969 Jun  4 19:26 agis_ddmendpoints.agis.ALL.json
[2025-06-04 19:31:11] -rw-------. 1 boinc boinc    379012 Jun  4 19:27 log.45006595._048559.job.log.tgz.1
[2025-06-04 19:31:11] -rw-------. 1 boinc boinc        95 Jun  4 19:28 pilot_heartbeat.json
[2025-06-04 19:31:11] -rw-------. 1 boinc boinc      7704 Jun  4 19:28 heartbeat.json
[2025-06-04 19:31:11] -rw-------. 1 boinc boinc      4539 Jun  4 19:28 pilotlog.txt
[2025-06-04 19:31:11] -rw-------. 1 boinc boinc   1228763 Jun  4 19:29 log.45006595._048559.job.log.1
[2025-06-04 19:31:11] -rw-------. 1 boinc boinc       357 Jun  4 19:29 output.list
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc       620 Jun  4 19:29 runtime_log
[2025-06-04 19:31:11] -rw-------. 1 boinc boinc   1628160 Jun  4 19:29 result.tar.gz
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc      8659 Jun  4 19:29 runtime_log.err
[2025-06-04 19:31:11] -rw-------. 1 boinc boinc       657 Jun  4 19:29 gPoNDm5Zqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKZmKDmWstK2n.diag
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc      8192 Jun  4 19:31 boinc_mmap_file
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc        28 Jun  4 19:31 wrapper_checkpoint.txt
[2025-06-04 19:31:11] -rw-r--r--. 1 boinc boinc     20594 Jun  4 19:31 stderr.txt
[2025-06-04 19:31:12] HITS file was successfully produced:
[2025-06-04 19:31:12] -rw-------. 1 boinc boinc 182842662 Jun  4 19:26 shared/HITS.pool.root.1
[2025-06-04 19:31:12]  *** Contents of shared directory: ***
[2025-06-04 19:31:12] total 391232
[2025-06-04 19:31:12] -rw-r--r--. 2 boinc boinc 215613929 Jun  4 14:54 ATLAS.root_0
[2025-06-04 19:31:12] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:54 start_atlas.sh
[2025-06-04 19:31:12] -rw-r--r--. 2 boinc boinc    508880 Jun  4 14:54 input.tar.gz
[2025-06-04 19:31:12] -rw-------. 1 boinc boinc 182842662 Jun  4 19:26 HITS.pool.root.1
[2025-06-04 19:31:12] -rw-------. 1 boinc boinc   1628160 Jun  4 19:29 result.tar.gz
19:31:13 (5219): run_atlas exited; CPU time 50872.216156
19:31:13 (5219): called boinc_finish(0)

</stderr_txt>
]]>

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