Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:38:42 (3923645): wrapper (7.7.26015): starting
01:38:42 (3923645): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 01:38:42] Arguments: --nthreads 12
[2025-06-04 01:38:42] Threads: 12
[2025-06-04 01:38:42] Checking for CVMFS
[2025-06-04 01:38:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:38:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:38:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:38:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:38:43] 2.12.6.0 665990 22893 423912 146769 3 152 27979707 32935936 4794 16776704 1 80409486 99.620 77912144 33718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 01:38:43] CVMFS is ok
[2025-06-04 01:38:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:38:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:38:43] Further information can be found at the LHC@home message board.
[2025-06-04 01:38:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:38:43] Checking for apptainer binary...
[2025-06-04 01:38:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:38:43] Running /usr/bin/apptainer --version
[2025-06-04 01:38:43] apptainer version 1.4.1-1.el9
[2025-06-04 01:38:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:38:43] c6-6-39-1.aglt2.org
[2025-06-04 01:38:43] apptainer works
[2025-06-04 01:38:43] Set ATHENA_PROC_NUMBER=12
[2025-06-04 01:38:43] Set ATHENA_CORE_NUMBER=12
[2025-06-04 01:38:43] Starting ATLAS job with PandaID=6678213712
[2025-06-04 01:38:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:22:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:22:46]  is_tar=False
[2025-06-04 02:22:46]  lfn=log.45006595._048552.job.log.tgz.1
[2025-06-04 02:22:46]  mtime=0
[2025-06-04 02:22:46]  protocol_id=None
[2025-06-04 02:22:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 02:22:46]  replicas=None
[2025-06-04 02:22:46]  scope=mc23_13p6TeV
[2025-06-04 02:22:46]  status=None
[2025-06-04 02:22:46]  status_code=0
[2025-06-04 02:22:46]  storage_token=
[2025-06-04 02:22:46]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678213712/log.45006595._048552.job.log.tgz.1
[2025-06-04 02:22:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/27/log.45006595._048552.job.log.tgz.1
[2025-06-04 02:22:46]  workdir=None
[2025-06-04 02:22:46] ]
[2025-06-04 02:22:46] 2025-06-04 06:22:22,464 | INFO     | transferring file log.45006595._048552.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678213712/log.45006595._048552.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:22:46] 2025-06-04 06:22:22,464 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678213712/log.45006595._048552.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._048552.job
[2025-06-04 02:22:46] 2025-06-04 06:22:22,476 | INFO     | adding to output.list: log.45006595._048552.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/27/log.45006595._048552.job.log.tg
[2025-06-04 02:22:46] 2025-06-04 06:22:22,477 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:22:46] 2025-06-04 06:22:22,477 | INFO     | summary of transferred files:
[2025-06-04 02:22:46] 2025-06-04 06:22:22,477 | INFO     |  -- lfn=log.45006595._048552.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:22:46] 2025-06-04 06:22:22,477 | INFO     | stage-out finished correctly
[2025-06-04 02:22:46] 2025-06-04 06:22:24,035 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:22:46] 2025-06-04 06:22:24,080 | INFO     | job 6678213712 has state=finished
[2025-06-04 02:22:46] 2025-06-04 06:22:24,080 | INFO     | preparing for final server update for job 6678213712 in state='finished'
[2025-06-04 02:22:46] 2025-06-04 06:22:24,081 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:22:46] 2025-06-04 06:22:24,081 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:22:46] 2025-06-04 06:22:24,081 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:22:46] 2025-06-04 06:22:24,081 | INFO     | job 6678213712 has finished - writing final server update
[2025-06-04 02:22:46] 2025-06-04 06:22:24,081 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:22:46] 2025-06-04 06:22:24,095 | INFO     | executing command: lscpu
[2025-06-04 02:22:46] 2025-06-04 06:22:24,156 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:22:46] 2025-06-04 06:22:24,276 | INFO     | PID=3927298 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 02:22:46] 2025-06-04 06:22:24,276 | INFO     | .. there are 8 such processes running
[2025-06-04 02:22:46] 2025-06-04 06:22:26,178 | WARNING  | process 3933877 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 02:22:46] 2025-06-04 06:22:26,178 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678213712/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:22:46] 2025-06-04 06:22:26,301 | INFO     | number of running child processes to parent process 3933877: 1
[2025-06-04 02:22:46] 2025-06-04 06:22:26,301 | INFO     | maximum number of monitored processes: 6
[2025-06-04 02:22:46] 2025-06-04 06:22:26,516 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 02:22:46] 2025-06-04 06:22:26,516 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678213712/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:22:46] 2025-06-04 06:22:26,517 | INFO     | extracted standard info from prmon json
[2025-06-04 02:22:46] 2025-06-04 06:22:26,517 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:22:46] 2025-06-04 06:22:26,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:22:46] 2025-06-04 06:22:26,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:22:46] 2025-06-04 06:22:26,517 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:22:46] 2025-06-04 06:22:26,518 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:22:46] 2025-06-04 06:22:26,518 | INFO     | sum of square deviations: 14456085.0
[2025-06-04 02:22:46] 2025-06-04 06:22:26,518 | INFO     | sum of deviations: 2473109274.9999995
[2025-06-04 02:22:46] 2025-06-04 06:22:26,518 | INFO     | mean x: 1749016923.5
[2025-06-04 02:22:46] 2025-06-04 06:22:26,518 | INFO     | mean y: 2396867.1666666665
[2025-06-04 02:22:46] 2025-06-04 06:22:26,518 | INFO     | -- intersect: -299214851484.6391
[2025-06-04 02:22:46] 2025-06-04 06:22:26,518 | INFO     | intersect: -299214851484.6391
[2025-06-04 02:22:46] 2025-06-04 06:22:26,518 | INFO     | chi2: 0.8487457129148513
[2025-06-04 02:22:46] 2025-06-04 06:22:26,518 | INFO     | -- intersect: -299214851484.6391
[2025-06-04 02:22:46] 2025-06-04 06:22:26,518 | INFO     | current memory leak: 171.08 B/s (using 36 data points, chi2=0.85)
[2025-06-04 02:22:46] 2025-06-04 06:22:26,519 | INFO     | ..............................
[2025-06-04 02:22:46] 2025-06-04 06:22:26,519 | INFO     | . Timing measurements:
[2025-06-04 02:22:46] 2025-06-04 06:22:26,519 | INFO     | . get job = 0 s
[2025-06-04 02:22:46] 2025-06-04 06:22:26,519 | INFO     | . initial setup = 2 s
[2025-06-04 02:22:46] 2025-06-04 06:22:26,519 | INFO     | . payload setup = 4 s
[2025-06-04 02:22:46] 2025-06-04 06:22:26,519 | INFO     | . stage-in = 0 s
[2025-06-04 02:22:46] 2025-06-04 06:22:26,519 | INFO     | . payload execution = 2590 s
[2025-06-04 02:22:46] 2025-06-04 06:22:26,519 | INFO     | . stage-out = 0 s
[2025-06-04 02:22:46] 2025-06-04 06:22:26,519 | INFO     | . log creation = 0 s
[2025-06-04 02:22:46] 2025-06-04 06:22:26,519 | INFO     | ..............................
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | 
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | job summary report
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | --------------------------------------------------
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | PanDA job id: 6678213712
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | task id: 45006595
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | errors: (none)
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | pilot state: finished 
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | transexitcode: 0
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | exeerrorcode: 0
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | exeerrordiag: 
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | exitcode: 0
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | exitmsg: OK
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | cpuconsumptiontime: 23840 s
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | nevents: 400
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | neventsw: 0
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | pid: 3933877
[2025-06-04 02:22:46] 2025-06-04 06:22:26,565 | INFO     | pgrp: 3933877
[2025-06-04 02:22:46] 2025-06-04 06:22:26,566 | INFO     | corecount: 12
[2025-06-04 02:22:46] 2025-06-04 06:22:26,566 | INFO     | event service: False
[2025-06-04 02:22:46] 2025-06-04 06:22:26,566 | INFO     | sizes: {0: 2404356, 1: 2405212, 3: 2405418, 11: 2405446, 2598: 2439539, 2600: 2439539, 2603: 2439837}
[2025-06-04 02:22:46] 2025-06-04 06:22:26,566 | INFO     | --------------------------------------------------
[2025-06-04 02:22:46] 2025-06-04 06:22:26,566 | INFO     | 
[2025-06-04 02:22:46] 2025-06-04 06:22:26,566 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:22:46] 2025-06-04 06:22:26,578 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,578 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,578 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | job 6678213712 has completed (purged errors)
[2025-06-04 02:22:46] 2025-06-04 06:22:26,579 | INFO     | overall cleanup function is called
[2025-06-04 02:22:46] 2025-06-04 06:22:27,586 | INFO     | --- collectZombieJob: --- 10, [3933877]
[2025-06-04 02:22:46] 2025-06-04 06:22:27,587 | INFO     | zombie collector waiting for pid 3933877
[2025-06-04 02:22:46] 2025-06-04 06:22:27,587 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:22:46] 2025-06-04 06:22:27,587 | INFO     | collected zombie processes
[2025-06-04 02:22:46] 2025-06-04 06:22:27,587 | INFO     | will attempt to kill all subprocesses of pid=3933877
[2025-06-04 02:22:46] 2025-06-04 06:22:27,710 | INFO     | process IDs to be killed: [3933877] (in reverse order)
[2025-06-04 02:22:46] 2025-06-04 06:22:27,761 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:22:46] 2025-06-04 06:22:27,762 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:22:46] 2025-06-04 06:22:27,768 | INFO     | did not find any defunct processes belonging to 3933877
[2025-06-04 02:22:46] 2025-06-04 06:22:27,774 | INFO     | did not find any defunct processes belonging to 3933877
[2025-06-04 02:22:46] 2025-06-04 06:22:27,774 | INFO     | ready for new job
[2025-06-04 02:22:46] 2025-06-04 06:22:27,774 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:22:46] 2025-06-04 06:22:27,776 | INFO     | **************************************
[2025-06-04 02:22:46] 2025-06-04 06:22:27,776 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:22:46] 2025-06-04 06:22:27,776 | INFO     | **************************************
[2025-06-04 02:22:46] 2025-06-04 06:22:27,776 | INFO     | 
[2025-06-04 02:22:46] 2025-06-04 06:22:27,790 | INFO     | architecture information:
[2025-06-04 02:22:46] 2025-06-04 06:22:27,790 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:22:46] 2025-06-04 06:22:27,798 | INFO     | cat /etc/os-release:
[2025-06-04 02:22:46] NAME="CentOS Linux"
[2025-06-04 02:22:46] VERSION="7 (Core)"
[2025-06-04 02:22:46] ID="centos"
[2025-06-04 02:22:46] ID_LIKE="rhel fedora"
[2025-06-04 02:22:46] VERSION_ID="7"
[2025-06-04 02:22:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:22:46] ANSI_COLOR="0;31"
[2025-06-04 02:22:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:22:46] HOME_URL="https://www.centos.org/"
[2025-06-04 02:22:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:22:46] 
[2025-06-04 02:22:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:22:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:22:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:22:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:22:46] 
[2025-06-04 02:22:46] 2025-06-04 06:22:27,799 | INFO     | **************************************
[2025-06-04 02:22:46] 2025-06-04 06:22:28,301 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:22:46] 2025-06-04 06:22:28,311 | INFO     | sufficient remaining disk space (76376178688 B)
[2025-06-04 02:22:46] 2025-06-04 06:22:28,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:22:46] 2025-06-04 06:22:28,311 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:22:46] 2025-06-04 06:22:28,311 | INFO     | update_server=False
[2025-06-04 02:22:46] 2025-06-04 06:22:28,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:22:46] 2025-06-04 06:22:28,311 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:22:46] 2025-06-04 06:22:28,312 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 02:22:46] 2025-06-04 06:22:28,312 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:22:46] 2025-06-04 06:22:28,312 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:22:46] 2025-06-04 06:22:28,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:22:46] 2025-06-04 06:22:28,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:22:46] 2025-06-04 06:22:28,804 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 02:22:46] 2025-06-04 06:22:28,804 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 02:22:46] 2025-06-04 06:22:28,804 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:22:46] 2025-06-04 06:22:28,805 | INFO     | will abort loop
[2025-06-04 02:22:46] 2025-06-04 06:22:29,311 | INFO     | all data control threads have been joined
[2025-06-04 02:22:46] 2025-06-04 06:22:29,313 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:29,318 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:29,418 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:29,626 | INFO     | all job control threads have been joined
[2025-06-04 02:22:46] 2025-06-04 06:22:29,751 | INFO     | all payload control threads have been joined
[2025-06-04 02:22:46] 2025-06-04 06:22:29,810 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:30,021 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:30,086 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:22:46] 2025-06-04 06:22:30,170 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:30,317 | INFO     | [data] control thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:30,317 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:30,409 | INFO     | [job] validate thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:30,480 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:30,518 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:30,589 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:30,632 | INFO     | [job] control thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:30,756 | INFO     | [payload] control thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:34,091 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:38,630 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:22:46] 2025-06-04 06:22:39,635 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:22:46] 2025-06-04 06:22:41,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139887758665536)>', '<ExcThread(monitor, started 139887135151872)>']
[2025-06-04 02:22:46] 2025-06-04 06:22:41,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:22:46] 2025-06-04 06:22:41,376 | INFO     | [monitor] control thread has ended
[2025-06-04 02:22:46] 2025-06-04 06:22:46,399 | INFO     | all workflow threads have been joined
[2025-06-04 02:22:46] 2025-06-04 06:22:46,399 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:22:46] 2025-06-04 06:22:46,400 | INFO     | traces error code: 0
[2025-06-04 02:22:46] 2025-06-04 06:22:46,400 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:22:46] 2025-06-04 06:22:46,513 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:22:46] 2025-06-04 06:22:46,515 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:22:46] 2025-06-04 06:22:46,517 [wrapper] pilotpid: 3927298
[2025-06-04 02:22:46] 2025-06-04 06:22:46,519 [wrapper] Pilot exit status: 0
[2025-06-04 02:22:46] 2025-06-04 06:22:46,526 [wrapper] pandaids: 6678213712
[2025-06-04 02:22:46] 2025-06-04 06:22:46,560 [wrapper] cleanup supervisor_pilot 3990000 3927299
[2025-06-04 02:22:46] 2025-06-04 06:22:46,563 [wrapper] Test setup, not cleaning
[2025-06-04 02:22:46] 2025-06-04 06:22:46,564 [wrapper] apfmon messages muted
[2025-06-04 02:22:46] 2025-06-04 06:22:46,566 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:22:46] 2025-06-04 06:22:46,568 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:22:46]  *** Error codes and diagnostics ***
[2025-06-04 02:22:46]     "exeErrorCode": 0,
[2025-06-04 02:22:46]     "exeErrorDiag": "",
[2025-06-04 02:22:46]     "pilotErrorCode": 0,
[2025-06-04 02:22:46]     "pilotErrorDiag": "",
[2025-06-04 02:22:46]  *** Listing of results directory ***
[2025-06-04 02:22:46] total 389124
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 19:42 pilot3.tar.gz
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 19:50 queuedata.json
[2025-06-04 02:22:46] -rwx------. 1 boincer umatlas     37140 Jun  3 19:50 runpilot2-wrapper.sh
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas       100 Jun  4 01:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:22:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 01:38 run_atlas
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas       105 Jun  4 01:38 job.xml
[2025-06-04 02:22:46] -rw-r--r--. 2 boincer umatlas 213976228 Jun  4 01:38 EVNT.45006593._001947.pool.root.1
[2025-06-04 02:22:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 01:38 start_atlas.sh
[2025-06-04 02:22:46] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 01:38 shared
[2025-06-04 02:22:46] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 01:38 input.tar.gz
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas         0 Jun  4 01:38 boinc_lockfile
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 01:38 pandaJob.out
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas    986745 Jun  4 01:38 agis_schedconf.cvmfs.json
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas   1603667 Jun  4 01:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:22:46] drwx------. 4 boincer umatlas      4096 Jun  4 01:38 pilot3
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas      6842 Jun  4 02:18 init_data.xml
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas       529 Jun  4 02:21 boinc_task_state.xml
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas 179379286 Jun  4 02:21 HITS.45006595._048552.pool.root.1
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas      1028 Jun  4 02:22 memory_monitor_summary.json
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas    358316 Jun  4 02:22 log.45006595._048552.job.log.tgz.1
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 02:22 boinc_mmap_file
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas        27 Jun  4 02:22 wrapper_checkpoint.txt
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas      7711 Jun  4 02:22 heartbeat.json
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas        95 Jun  4 02:22 pilot_heartbeat.json
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas      4734 Jun  4 02:22 pilotlog.txt
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas    282486 Jun  4 02:22 log.45006595._048552.job.log.1
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas       357 Jun  4 02:22 output.list
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas       620 Jun  4 02:22 runtime_log
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas    655360 Jun  4 02:22 result.tar.gz
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas       652 Jun  4 02:22 xrjNDm5Zqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGZmKDm3xFT5m.diag
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 02:22 runtime_log.err
[2025-06-04 02:22:46] -rw-r--r--. 1 boincer umatlas     21551 Jun  4 02:22 stderr.txt
[2025-06-04 02:22:46] HITS file was successfully produced:
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas 179379286 Jun  4 02:21 shared/HITS.pool.root.1
[2025-06-04 02:22:46]  *** Contents of shared directory: ***
[2025-06-04 02:22:46] total 385300
[2025-06-04 02:22:46] -rw-r--r--. 2 boincer umatlas 213976228 Jun  4 01:38 ATLAS.root_0
[2025-06-04 02:22:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 01:38 start_atlas.sh
[2025-06-04 02:22:46] -rw-r--r--. 2 boincer umatlas    508884 Jun  4 01:38 input.tar.gz
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas 179379286 Jun  4 02:21 HITS.pool.root.1
[2025-06-04 02:22:46] -rw-------. 1 boincer umatlas    655360 Jun  4 02:22 result.tar.gz
02:22:47 (3923645): run_atlas exited; CPU time 23878.670098
02:22:47 (3923645): called boinc_finish(0)

</stderr_txt>
]]>

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