Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:30:10 (83563): wrapper (7.7.26015): starting
01:30:10 (83563): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 01:30:10] Arguments: --nthreads 12
[2025-06-04 01:30:10] Threads: 12
[2025-06-04 01:30:10] Checking for CVMFS
[2025-06-04 01:30:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 01:30:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 01:30:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 01:30:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 01:30:10] 2.12.6.0 1448327 22853 395332 146769 2 70 38075832 40960001 5016 16776704 0 110896533 99.740 81983818 34427 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 01:30:10] CVMFS is ok
[2025-06-04 01:30:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 01:30:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 01:30:10] Further information can be found at the LHC@home message board.
[2025-06-04 01:30:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 01:30:10] Checking for apptainer binary...
[2025-06-04 01:30:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 01:30:10] Running /usr/bin/apptainer --version
[2025-06-04 01:30:10] apptainer version 1.4.1-1.el9
[2025-06-04 01:30:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 01:30:10] c6-5-37-3.aglt2.org
[2025-06-04 01:30:10] apptainer works
[2025-06-04 01:30:10] Set ATHENA_PROC_NUMBER=12
[2025-06-04 01:30:10] Set ATHENA_CORE_NUMBER=12
[2025-06-04 01:30:10] Starting ATLAS job with PandaID=6678213771
[2025-06-04 01:30:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:08:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:08:47]  guid=fcb911ed-e80e-455e-947f-8cf6579f424b
[2025-06-04 02:08:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 02:08:47]  is_altstaged=None
[2025-06-04 02:08:47]  is_tar=False
[2025-06-04 02:08:47]  lfn=log.45006595._048611.job.log.tgz.1
[2025-06-04 02:08:47]  mtime=0
[2025-06-04 02:08:47]  protocol_id=None
[2025-06-04 02:08:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 02:08:47]  replicas=None
[2025-06-04 02:08:47]  scope=mc23_13p6TeV
[2025-06-04 02:08:47]  status=None
[2025-06-04 02:08:47]  status_code=0
[2025-06-04 02:08:47]  storage_token=
[2025-06-04 02:08:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678213771/log.45006595._048611.job.log.tgz.1
[2025-06-04 02:08:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/ab/log.45006595._048611.job.log.tgz.1
[2025-06-04 02:08:47]  workdir=None
[2025-06-04 02:08:47] ]
[2025-06-04 02:08:47] 2025-06-04 06:08:28,893 | INFO     | transferring file log.45006595._048611.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678213771/log.45006595._048611.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:08:47] 2025-06-04 06:08:28,893 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678213771/log.45006595._048611.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._048611.job
[2025-06-04 02:08:47] 2025-06-04 06:08:28,906 | INFO     | adding to output.list: log.45006595._048611.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9c/ab/log.45006595._048611.job.log.tg
[2025-06-04 02:08:47] 2025-06-04 06:08:28,907 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:08:47] 2025-06-04 06:08:28,907 | INFO     | summary of transferred files:
[2025-06-04 02:08:47] 2025-06-04 06:08:28,907 | INFO     |  -- lfn=log.45006595._048611.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:08:47] 2025-06-04 06:08:28,907 | INFO     | stage-out finished correctly
[2025-06-04 02:08:47] 2025-06-04 06:08:29,566 | INFO     | monitor loop #175: job 0:6678213771 is in state 'finished'
[2025-06-04 02:08:47] 2025-06-04 06:08:29,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:08:47] 2025-06-04 06:08:31,509 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:08:47] 2025-06-04 06:08:31,588 | INFO     | job 6678213771 has state=finished
[2025-06-04 02:08:47] 2025-06-04 06:08:31,589 | INFO     | preparing for final server update for job 6678213771 in state='finished'
[2025-06-04 02:08:47] 2025-06-04 06:08:31,638 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 02:08:47] 2025-06-04 06:08:31,639 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:08:47] 2025-06-04 06:08:31,639 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:08:47] 2025-06-04 06:08:31,639 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:08:47] 2025-06-04 06:08:31,639 | INFO     | job 6678213771 has finished - writing final server update
[2025-06-04 02:08:47] 2025-06-04 06:08:31,639 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:08:47] 2025-06-04 06:08:31,654 | INFO     | executing command: lscpu
[2025-06-04 02:08:47] 2025-06-04 06:08:31,704 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:08:47] 2025-06-04 06:08:32,075 | INFO     | monitor loop #176: job 0:6678213771 is in state 'finished'
[2025-06-04 02:08:47] 2025-06-04 06:08:32,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:08:47] 2025-06-04 06:08:34,323 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-04 02:08:47] 2025-06-04 06:08:34,323 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678213771/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:08:47] 2025-06-04 06:08:34,324 | INFO     | extracted standard info from prmon json
[2025-06-04 02:08:47] 2025-06-04 06:08:34,324 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:08:47] 2025-06-04 06:08:34,324 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:08:47] 2025-06-04 06:08:34,324 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:08:47] 2025-06-04 06:08:34,324 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:08:47] 2025-06-04 06:08:34,325 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:08:47] 2025-06-04 06:08:34,325 | INFO     | sum of square deviations: 9228080.0
[2025-06-04 02:08:47] 2025-06-04 06:08:34,325 | INFO     | sum of deviations: 3509267353.0
[2025-06-04 02:08:47] 2025-06-04 06:08:34,325 | INFO     | mean x: 1749016259.0
[2025-06-04 02:08:47] 2025-06-04 06:08:34,325 | INFO     | mean y: 2636374.6129032257
[2025-06-04 02:08:47] 2025-06-04 06:08:34,325 | INFO     | -- intersect: -665115747685.2231
[2025-06-04 02:08:47] 2025-06-04 06:08:34,325 | INFO     | intersect: -665115747685.2231
[2025-06-04 02:08:47] 2025-06-04 06:08:34,325 | INFO     | chi2: 0.6431517902279373
[2025-06-04 02:08:47] 2025-06-04 06:08:34,326 | INFO     | -- intersect: -665115747685.2231
[2025-06-04 02:08:47] 2025-06-04 06:08:34,326 | INFO     | current memory leak: 380.28 B/s (using 31 data points, chi2=0.64)
[2025-06-04 02:08:47] 2025-06-04 06:08:34,326 | INFO     | ..............................
[2025-06-04 02:08:47] 2025-06-04 06:08:34,326 | INFO     | . Timing measurements:
[2025-06-04 02:08:47] 2025-06-04 06:08:34,326 | INFO     | . get job = 0 s
[2025-06-04 02:08:47] 2025-06-04 06:08:34,326 | INFO     | . initial setup = 2 s
[2025-06-04 02:08:47] 2025-06-04 06:08:34,326 | INFO     | . payload setup = 4 s
[2025-06-04 02:08:47] 2025-06-04 06:08:34,326 | INFO     | . stage-in = 0 s
[2025-06-04 02:08:47] 2025-06-04 06:08:34,326 | INFO     | . payload execution = 2269 s
[2025-06-04 02:08:47] 2025-06-04 06:08:34,326 | INFO     | . stage-out = 0 s
[2025-06-04 02:08:47] 2025-06-04 06:08:34,326 | INFO     | . log creation = 0 s
[2025-06-04 02:08:47] 2025-06-04 06:08:34,326 | INFO     | ..............................
[2025-06-04 02:08:47] 2025-06-04 06:08:34,372 | INFO     | 
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | job summary report
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | --------------------------------------------------
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | PanDA job id: 6678213771
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | task id: 45006595
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | errors: (none)
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | pilot state: finished 
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | transexitcode: 0
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | exeerrorcode: 0
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | exeerrordiag: 
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | exitcode: 0
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | exitmsg: OK
[2025-06-04 02:08:47] 2025-06-04 06:08:34,373 | INFO     | cpuconsumptiontime: 20426 s
[2025-06-04 02:08:47] 2025-06-04 06:08:34,374 | INFO     | nevents: 400
[2025-06-04 02:08:47] 2025-06-04 06:08:34,374 | INFO     | neventsw: 0
[2025-06-04 02:08:47] 2025-06-04 06:08:34,374 | INFO     | pid: 93761
[2025-06-04 02:08:47] 2025-06-04 06:08:34,374 | INFO     | pgrp: 93761
[2025-06-04 02:08:47] 2025-06-04 06:08:34,374 | INFO     | corecount: 12
[2025-06-04 02:08:47] 2025-06-04 06:08:34,374 | INFO     | event service: False
[2025-06-04 02:08:47] 2025-06-04 06:08:34,374 | INFO     | sizes: {0: 2405184, 3: 2405390, 11: 2405418, 2277: 2430452, 2278: 2439393, 2281: 2439449, 2283: 2439747}
[2025-06-04 02:08:47] 2025-06-04 06:08:34,374 | INFO     | --------------------------------------------------
[2025-06-04 02:08:47] 2025-06-04 06:08:34,374 | INFO     | 
[2025-06-04 02:08:47] 2025-06-04 06:08:34,374 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:08:47] 2025-06-04 06:08:34,388 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,388 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,388 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | job 6678213771 has completed (purged errors)
[2025-06-04 02:08:47] 2025-06-04 06:08:34,389 | INFO     | overall cleanup function is called
[2025-06-04 02:08:47] 2025-06-04 06:08:35,397 | INFO     | --- collectZombieJob: --- 10, [93761]
[2025-06-04 02:08:47] 2025-06-04 06:08:35,398 | INFO     | zombie collector waiting for pid 93761
[2025-06-04 02:08:47] 2025-06-04 06:08:35,398 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:08:47] 2025-06-04 06:08:35,398 | INFO     | collected zombie processes
[2025-06-04 02:08:47] 2025-06-04 06:08:35,398 | INFO     | will attempt to kill all subprocesses of pid=93761
[2025-06-04 02:08:47] 2025-06-04 06:08:35,586 | INFO     | process IDs to be killed: [93761] (in reverse order)
[2025-06-04 02:08:47] 2025-06-04 06:08:35,637 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:08:47] 2025-06-04 06:08:35,637 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:08:47] 2025-06-04 06:08:35,647 | INFO     | did not find any defunct processes belonging to 93761
[2025-06-04 02:08:47] 2025-06-04 06:08:35,656 | INFO     | did not find any defunct processes belonging to 93761
[2025-06-04 02:08:47] 2025-06-04 06:08:35,657 | INFO     | ready for new job
[2025-06-04 02:08:47] 2025-06-04 06:08:35,657 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:08:47] 2025-06-04 06:08:35,658 | INFO     | **************************************
[2025-06-04 02:08:47] 2025-06-04 06:08:35,658 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:08:47] 2025-06-04 06:08:35,658 | INFO     | **************************************
[2025-06-04 02:08:47] 2025-06-04 06:08:35,659 | INFO     | 
[2025-06-04 02:08:47] 2025-06-04 06:08:35,672 | INFO     | architecture information:
[2025-06-04 02:08:47] 2025-06-04 06:08:35,672 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:08:47] 2025-06-04 06:08:35,682 | INFO     | cat /etc/os-release:
[2025-06-04 02:08:47] NAME="CentOS Linux"
[2025-06-04 02:08:47] VERSION="7 (Core)"
[2025-06-04 02:08:47] ID="centos"
[2025-06-04 02:08:47] ID_LIKE="rhel fedora"
[2025-06-04 02:08:47] VERSION_ID="7"
[2025-06-04 02:08:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:08:47] ANSI_COLOR="0;31"
[2025-06-04 02:08:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:08:47] HOME_URL="https://www.centos.org/"
[2025-06-04 02:08:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:08:47] 
[2025-06-04 02:08:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:08:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:08:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:08:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:08:47] 
[2025-06-04 02:08:47] 2025-06-04 06:08:35,682 | INFO     | **************************************
[2025-06-04 02:08:47] 2025-06-04 06:08:36,184 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:08:47] 2025-06-04 06:08:36,195 | INFO     | sufficient remaining disk space (75348574208 B)
[2025-06-04 02:08:47] 2025-06-04 06:08:36,195 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:08:47] 2025-06-04 06:08:36,195 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:08:47] 2025-06-04 06:08:36,196 | INFO     | update_server=False
[2025-06-04 02:08:47] 2025-06-04 06:08:36,196 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:08:47] 2025-06-04 06:08:36,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:08:47] 2025-06-04 06:08:36,196 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:08:47] 2025-06-04 06:08:36,196 | INFO     | aborting loop
[2025-06-04 02:08:47] 2025-06-04 06:08:36,362 | INFO     | all data control threads have been joined
[2025-06-04 02:08:47] 2025-06-04 06:08:36,460 | INFO     | PID=87229 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 02:08:47] 2025-06-04 06:08:36,460 | INFO     | .. there are 8 such processes running
[2025-06-04 02:08:47] 2025-06-04 06:08:36,460 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:08:47] 2025-06-04 06:08:36,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:08:47] 2025-06-04 06:08:36,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:08:47] 2025-06-04 06:08:36,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:08:47] 2025-06-04 06:08:37,200 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:37,202 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:37,202 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:37,344 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:37,368 | INFO     | [data] control thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:37,554 | INFO     | [job] validate thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:37,578 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:37,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:08:47] 2025-06-04 06:08:37,663 | INFO     | all payload control threads have been joined
[2025-06-04 02:08:47] 2025-06-04 06:08:37,681 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:37,762 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:37,864 | INFO     | all job control threads have been joined
[2025-06-04 02:08:47] 2025-06-04 06:08:38,000 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:38,420 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:38,466 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:38,668 | INFO     | [payload] control thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:38,866 | INFO     | [job] control thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:38,969 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:41,599 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:08:47] 2025-06-04 06:08:41,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139855577921344)>', '<ExcThread(monitor, started 139854864180992)>']
[2025-06-04 02:08:47] 2025-06-04 06:08:42,487 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:08:47] 2025-06-04 06:08:42,488 | INFO     | [monitor] control thread has ended
[2025-06-04 02:08:47] 2025-06-04 06:08:46,900 | INFO     | all workflow threads have been joined
[2025-06-04 02:08:47] 2025-06-04 06:08:46,901 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:08:47] 2025-06-04 06:08:46,901 | INFO     | traces error code: 0
[2025-06-04 02:08:47] 2025-06-04 06:08:46,901 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:08:47] 2025-06-04 06:08:47,017 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:08:47] 2025-06-04 06:08:47,019 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:08:47] 2025-06-04 06:08:47,021 [wrapper] pilotpid: 87229
[2025-06-04 02:08:47] 2025-06-04 06:08:47,022 [wrapper] Pilot exit status: 0
[2025-06-04 02:08:47] 2025-06-04 06:08:47,029 [wrapper] pandaids: 6678213771
[2025-06-04 02:08:47] 2025-06-04 06:08:47,064 [wrapper] cleanup supervisor_pilot  148759 87230
[2025-06-04 02:08:47] 2025-06-04 06:08:47,066 [wrapper] Test setup, not cleaning
[2025-06-04 02:08:47] 2025-06-04 06:08:47,068 [wrapper] apfmon messages muted
[2025-06-04 02:08:47] 2025-06-04 06:08:47,070 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:08:47] 2025-06-04 06:08:47,072 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:08:47]  *** Error codes and diagnostics ***
[2025-06-04 02:08:47]     "exeErrorCode": 0,
[2025-06-04 02:08:47]     "exeErrorDiag": "",
[2025-06-04 02:08:47]     "pilotErrorCode": 0,
[2025-06-04 02:08:47]     "pilotErrorDiag": "",
[2025-06-04 02:08:47]  *** Listing of results directory ***
[2025-06-04 02:08:47] total 377760
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 19:53 pilot3.tar.gz
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 19:55 queuedata.json
[2025-06-04 02:08:47] -rwx------. 1 boincer umatlas     37140 Jun  3 19:55 runpilot2-wrapper.sh
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas       100 Jun  4 01:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:08:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 01:30 run_atlas
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas       105 Jun  4 01:30 job.xml
[2025-06-04 02:08:47] -rw-r--r--. 2 boincer umatlas 214078148 Jun  4 01:30 EVNT.45006593._001950.pool.root.1
[2025-06-04 02:08:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 01:30 start_atlas.sh
[2025-06-04 02:08:47] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 01:30 shared
[2025-06-04 02:08:47] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 01:30 input.tar.gz
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas         0 Jun  4 01:30 boinc_lockfile
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas      2525 Jun  4 01:30 pandaJob.out
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas    986745 Jun  4 01:30 agis_schedconf.cvmfs.json
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas   1603667 Jun  4 01:30 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:08:47] drwx------. 4 boincer umatlas      4096 Jun  4 01:30 pilot3
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas      6841 Jun  4 02:03 init_data.xml
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas        95 Jun  4 02:07 pilot_heartbeat.json
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas 167737089 Jun  4 02:08 HITS.45006595._048611.pool.root.1
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas       529 Jun  4 02:08 boinc_task_state.xml
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas      1027 Jun  4 02:08 memory_monitor_summary.json
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 02:08 boinc_mmap_file
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas    332513 Jun  4 02:08 log.45006595._048611.job.log.tgz.1
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas        27 Jun  4 02:08 wrapper_checkpoint.txt
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas      7709 Jun  4 02:08 heartbeat.json
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas      4745 Jun  4 02:08 pilotlog.txt
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas    254098 Jun  4 02:08 log.45006595._048611.job.log.1
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas       357 Jun  4 02:08 output.list
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas       620 Jun  4 02:08 runtime_log
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas    604160 Jun  4 02:08 result.tar.gz
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas      8666 Jun  4 02:08 runtime_log.err
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas       650 Jun  4 02:08 21nLDmoeqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmXamKDm0eWygm.diag
[2025-06-04 02:08:47] -rw-r--r--. 1 boincer umatlas     21352 Jun  4 02:08 stderr.txt
[2025-06-04 02:08:47] HITS file was successfully produced:
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas 167737089 Jun  4 02:08 shared/HITS.pool.root.1
[2025-06-04 02:08:47]  *** Contents of shared directory: ***
[2025-06-04 02:08:47] total 373984
[2025-06-04 02:08:47] -rw-r--r--. 2 boincer umatlas 214078148 Jun  4 01:30 ATLAS.root_0
[2025-06-04 02:08:47] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 01:30 start_atlas.sh
[2025-06-04 02:08:47] -rw-r--r--. 2 boincer umatlas    508883 Jun  4 01:30 input.tar.gz
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas 167737089 Jun  4 02:08 HITS.pool.root.1
[2025-06-04 02:08:47] -rw-------. 1 boincer umatlas    604160 Jun  4 02:08 result.tar.gz
02:08:48 (83563): run_atlas exited; CPU time 20457.932334
02:08:48 (83563): called boinc_finish(0)

</stderr_txt>
]]>

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