Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:44:40 (1434596): wrapper (7.7.26015): starting
00:44:40 (1434596): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 00:44:40] Arguments: --nthreads 4
[2025-06-06 00:44:40] Threads: 4
[2025-06-06 00:44:40] Checking for CVMFS
[2025-06-06 00:44:40] No cvmfs_config command found, will try listing directly
[2025-06-06 00:44:40] CVMFS is ok
[2025-06-06 00:44:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 00:44:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 00:44:40] Further information can be found at the LHC@home message board.
[2025-06-06 00:44:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 00:44:40] Checking for apptainer binary...
[2025-06-06 00:44:40] which: no apptainer in ((null))
[2025-06-06 00:44:40] apptainer is not installed, using version from CVMFS
[2025-06-06 00:44:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 00:44:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-06-06 00:44:40] apptainer works
[2025-06-06 00:44:40] Set ATHENA_PROC_NUMBER=4
[2025-06-06 00:44:40] Set ATHENA_CORE_NUMBER=4
[2025-06-06 00:44:40] Starting ATLAS job with PandaID=6678213766
[2025-06-06 00:44:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 03:00:02]  *** The last 200 lines of the pilot log: ***
[2025-06-06 03:00:02] 2025-06-06 00:59:26,576 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6678213766/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:00:02] 2025-06-06 00:59:26,673 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 03:00:02] 2025-06-06 00:59:27,301 | INFO     | number of running child processes to parent process 1446396: 1
[2025-06-06 03:00:02] 2025-06-06 00:59:27,301 | INFO     | maximum number of monitored processes: 6
[2025-06-06 03:00:02] 2025-06-06 00:59:29,804 | INFO     | monitor loop #560: job 0:6678213766 is in state 'finished'
[2025-06-06 03:00:02] 2025-06-06 00:59:29,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:00:02] 2025-06-06 00:59:32,307 | INFO     | monitor loop #561: job 0:6678213766 is in state 'finished'
[2025-06-06 03:00:02] 2025-06-06 00:59:32,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 03:00:02] 2025-06-06 00:59:32,773 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 03:00:02] 2025-06-06 00:59:32,773 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6678213766/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 03:00:02] 2025-06-06 00:59:32,774 | INFO     | extracted standard info from prmon json
[2025-06-06 03:00:02] 2025-06-06 00:59:32,774 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 03:00:02] 2025-06-06 00:59:32,774 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 03:00:02] 2025-06-06 00:59:32,775 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 03:00:02] 2025-06-06 00:59:32,775 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 03:00:02] 2025-06-06 00:59:32,777 | INFO     | fitting pss+swap vs Time
[2025-06-06 03:00:02] 2025-06-06 00:59:32,778 | INFO     | sum of square deviations: 713140813.0
[2025-06-06 03:00:02] 2025-06-06 00:59:32,778 | INFO     | sum of deviations: 16265930539.0
[2025-06-06 03:00:02] 2025-06-06 00:59:32,778 | INFO     | mean x: 1749167522.5
[2025-06-06 03:00:02] 2025-06-06 00:59:32,779 | INFO     | mean y: 2298542.3181818184
[2025-06-06 03:00:02] 2025-06-06 00:59:32,779 | INFO     | -- intersect: -39894222458.02978
[2025-06-06 03:00:02] 2025-06-06 00:59:32,779 | INFO     | intersect: -39894222458.02978
[2025-06-06 03:00:02] 2025-06-06 00:59:32,779 | INFO     | chi2: 1.710439761225122
[2025-06-06 03:00:02] 2025-06-06 00:59:32,779 | INFO     | sum of square deviations: 635130048.0
[2025-06-06 03:00:02] 2025-06-06 00:59:32,780 | INFO     | sum of deviations: 15677909571.0
[2025-06-06 03:00:02] 2025-06-06 00:59:32,780 | INFO     | mean x: 1749167370.0
[2025-06-06 03:00:02] 2025-06-06 00:59:32,780 | INFO     | mean y: 2297392.307086614
[2025-06-06 03:00:02] 2025-06-06 00:59:32,780 | INFO     | -- intersect: -43175139949.47634
[2025-06-06 03:00:02] 2025-06-06 00:59:32,780 | INFO     | intersect: -43175139949.47634
[2025-06-06 03:00:02] 2025-06-06 00:59:32,781 | INFO     | chi2: 1.7132337400157018
[2025-06-06 03:00:02] 2025-06-06 00:59:32,781 | INFO     | current chi2=1.7132337400157018 (change=-0.1633485641481185 %)
[2025-06-06 03:00:02] 2025-06-06 00:59:32,781 | INFO     | right removable region: 126
[2025-06-06 03:00:02] 2025-06-06 00:59:32,781 | INFO     | sum of square deviations: 635130048.0
[2025-06-06 03:00:02] 2025-06-06 00:59:32,782 | INFO     | sum of deviations: -4805706758.000001
[2025-06-06 03:00:02] 2025-06-06 00:59:32,782 | INFO     | mean x: 1749167675.0
[2025-06-06 03:00:02] 2025-06-06 00:59:32,782 | INFO     | mean y: 2339098.8267716537
[2025-06-06 03:00:02] 2025-06-06 00:59:32,782 | INFO     | -- intersect: 13237403229.539494
[2025-06-06 03:00:02] 2025-06-06 00:59:32,782 | INFO     | intersect: 13237403229.539494
[2025-06-06 03:00:02] 2025-06-06 00:59:32,782 | INFO     | chi2: 0.011575092303461383
[2025-06-06 03:00:02] 2025-06-06 00:59:32,782 | INFO     | current chi2=0.011575092303461383 (change=99.32326805270414 %)
[2025-06-06 03:00:02] 2025-06-06 00:59:32,783 | INFO     | sum of square deviations: 563026370.5
[2025-06-06 03:00:02] 2025-06-06 00:59:32,783 | INFO     | sum of deviations: -4074997121.500001
[2025-06-06 03:00:02] 2025-06-06 00:59:32,783 | INFO     | mean x: 1749167827.5
[2025-06-06 03:00:02] 2025-06-06 00:59:32,783 | INFO     | mean y: 2337540.8114754097
[2025-06-06 03:00:02] 2025-06-06 00:59:32,783 | INFO     | -- intersect: 12662230994.38624
[2025-06-06 03:00:02] 2025-06-06 00:59:32,784 | INFO     | intersect: 12662230994.38624
[2025-06-06 03:00:02] 2025-06-06 00:59:32,784 | INFO     | chi2: 0.011301557990391847
[2025-06-06 03:00:02] 2025-06-06 00:59:32,784 | INFO     | current chi2=0.011301557990391847 (change=2.363128568639917 %)
[2025-06-06 03:00:02] 2025-06-06 00:59:32,784 | INFO     | left removable region: 20
[2025-06-06 03:00:02] 2025-06-06 00:59:32,786 | INFO     | sum of square deviations: 369281342.5
[2025-06-06 03:00:02] 2025-06-06 00:59:32,787 | INFO     | sum of deviations: -1636080969.5
[2025-06-06 03:00:02] 2025-06-06 00:59:32,787 | INFO     | mean x: 1749167949.5
[2025-06-06 03:00:02] 2025-06-06 00:59:32,787 | INFO     | mean y: 2332136.5754716983
[2025-06-06 03:00:02] 2025-06-06 00:59:32,787 | INFO     | -- intersect: 7751925915.839548
[2025-06-06 03:00:02] 2025-06-06 00:59:32,787 | INFO     | intersect: 7751925915.839548
[2025-06-06 03:00:02] 2025-06-06 00:59:32,787 | INFO     | chi2: 0.007433733622137675
[2025-06-06 03:00:02] 2025-06-06 00:59:32,788 | INFO     | -- intersect: 7751925915.839548
[2025-06-06 03:00:02] 2025-06-06 00:59:32,788 | INFO     | current memory leak: -4.43 B/s (using 106 data points, chi2=0.01)
[2025-06-06 03:00:02] 2025-06-06 00:59:32,788 | INFO     | ..............................
[2025-06-06 03:00:02] 2025-06-06 00:59:32,788 | INFO     | . Timing measurements:
[2025-06-06 03:00:02] 2025-06-06 00:59:32,788 | INFO     | . get job = 0 s
[2025-06-06 03:00:02] 2025-06-06 00:59:32,788 | INFO     | . initial setup = 1 s
[2025-06-06 03:00:02] 2025-06-06 00:59:32,789 | INFO     | . payload setup = 9 s
[2025-06-06 03:00:02] 2025-06-06 00:59:32,789 | INFO     | . stage-in = 0 s
[2025-06-06 03:00:02] 2025-06-06 00:59:32,789 | INFO     | . payload execution = 8035 s
[2025-06-06 03:00:02] 2025-06-06 00:59:32,789 | INFO     | . stage-out = 0 s
[2025-06-06 03:00:02] 2025-06-06 00:59:32,789 | INFO     | . log creation = 0 s
[2025-06-06 03:00:02] 2025-06-06 00:59:32,789 | INFO     | ..............................
[2025-06-06 03:00:02] 2025-06-06 00:59:32,887 | INFO     | 
[2025-06-06 03:00:02] 2025-06-06 00:59:32,887 | INFO     | job summary report
[2025-06-06 03:00:02] 2025-06-06 00:59:32,887 | INFO     | --------------------------------------------------
[2025-06-06 03:00:02] 2025-06-06 00:59:32,887 | INFO     | PanDA job id: 6678213766
[2025-06-06 03:00:02] 2025-06-06 00:59:32,888 | INFO     | task id: 45006595
[2025-06-06 03:00:02] 2025-06-06 00:59:32,888 | INFO     | errors: (none)
[2025-06-06 03:00:02] 2025-06-06 00:59:32,888 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 03:00:02] 2025-06-06 00:59:32,888 | INFO     | pilot state: finished 
[2025-06-06 03:00:02] 2025-06-06 00:59:32,888 | INFO     | transexitcode: 0
[2025-06-06 03:00:02] 2025-06-06 00:59:32,888 | INFO     | exeerrorcode: 0
[2025-06-06 03:00:02] 2025-06-06 00:59:32,888 | INFO     | exeerrordiag: 
[2025-06-06 03:00:02] 2025-06-06 00:59:32,888 | INFO     | exitcode: 0
[2025-06-06 03:00:02] 2025-06-06 00:59:32,888 | INFO     | exitmsg: OK
[2025-06-06 03:00:02] 2025-06-06 00:59:32,888 | INFO     | cpuconsumptiontime: 30420 s
[2025-06-06 03:00:02] 2025-06-06 00:59:32,888 | INFO     | nevents: 400
[2025-06-06 03:00:02] 2025-06-06 00:59:32,889 | INFO     | neventsw: 0
[2025-06-06 03:00:02] 2025-06-06 00:59:32,889 | INFO     | pid: 1446396
[2025-06-06 03:00:02] 2025-06-06 00:59:32,889 | INFO     | pgrp: 1446396
[2025-06-06 03:00:02] 2025-06-06 00:59:32,889 | INFO     | corecount: 4
[2025-06-06 03:00:02] 2025-06-06 00:59:32,889 | INFO     | event service: False
[2025-06-06 03:00:02] 2025-06-06 00:59:32,889 | INFO     | sizes: {0: 2397352, 1: 2397352, 7: 2397586, 11: 2397614, 8049: 2425600, 8050: 2434565, 8053: 2434749, 8062: 2434919}
[2025-06-06 03:00:02] 2025-06-06 00:59:32,889 | INFO     | --------------------------------------------------
[2025-06-06 03:00:02] 2025-06-06 00:59:32,889 | INFO     | 
[2025-06-06 03:00:02] 2025-06-06 00:59:32,889 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-06-06 03:00:02] 2025-06-06 00:59:32,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,927 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,928 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,929 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 03:00:02] 2025-06-06 00:59:32,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,929 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 03:00:02] 2025-06-06 00:59:32,929 | INFO     | job 6678213766 has completed (purged errors)
[2025-06-06 03:00:02] 2025-06-06 00:59:32,929 | INFO     | overall cleanup function is called
[2025-06-06 03:00:02] 2025-06-06 00:59:33,935 | INFO     | --- collectZombieJob: --- 10, [1446396]
[2025-06-06 03:00:02] 2025-06-06 00:59:33,935 | INFO     | zombie collector waiting for pid 1446396
[2025-06-06 03:00:02] 2025-06-06 00:59:33,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 03:00:02] 2025-06-06 00:59:33,936 | INFO     | collected zombie processes
[2025-06-06 03:00:02] 2025-06-06 00:59:33,936 | INFO     | will attempt to kill all subprocesses of pid=1446396
[2025-06-06 03:00:02] 2025-06-06 00:59:34,618 | INFO     | process IDs to be killed: [1446396] (in reverse order)
[2025-06-06 03:00:02] 2025-06-06 00:59:34,864 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 03:00:02] 2025-06-06 00:59:34,864 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 03:00:02] 2025-06-06 00:59:34,890 | INFO     | did not find any defunct processes belonging to 1446396
[2025-06-06 03:00:02] 2025-06-06 00:59:34,916 | INFO     | did not find any defunct processes belonging to 1446396
[2025-06-06 03:00:02] 2025-06-06 00:59:34,917 | INFO     | ready for new job
[2025-06-06 03:00:02] 2025-06-06 00:59:34,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 03:00:02] 2025-06-06 00:59:34,919 | INFO     | **************************************
[2025-06-06 03:00:02] 2025-06-06 00:59:34,919 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 03:00:02] 2025-06-06 00:59:34,919 | INFO     | **************************************
[2025-06-06 03:00:02] 2025-06-06 00:59:34,919 | INFO     | 
[2025-06-06 03:00:02] 2025-06-06 00:59:34,928 | INFO     | architecture information:
[2025-06-06 03:00:02] 2025-06-06 00:59:34,928 | INFO     | executing command: cat /etc/os-release
[2025-06-06 03:00:02] 2025-06-06 00:59:34,954 | INFO     | cat /etc/os-release:
[2025-06-06 03:00:02] NAME="CentOS Linux"
[2025-06-06 03:00:02] VERSION="7 (Core)"
[2025-06-06 03:00:02] ID="centos"
[2025-06-06 03:00:02] ID_LIKE="rhel fedora"
[2025-06-06 03:00:02] VERSION_ID="7"
[2025-06-06 03:00:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 03:00:02] ANSI_COLOR="0;31"
[2025-06-06 03:00:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 03:00:02] HOME_URL="https://www.centos.org/"
[2025-06-06 03:00:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 03:00:02] 
[2025-06-06 03:00:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 03:00:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 03:00:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 03:00:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 03:00:02] 
[2025-06-06 03:00:02] 2025-06-06 00:59:34,954 | INFO     | **************************************
[2025-06-06 03:00:02] 2025-06-06 00:59:35,457 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-06-06 03:00:02] 2025-06-06 00:59:35,484 | INFO     | sufficient remaining disk space (3273897541632 B)
[2025-06-06 03:00:02] 2025-06-06 00:59:35,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 03:00:02] 2025-06-06 00:59:35,485 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 03:00:02] 2025-06-06 00:59:35,485 | INFO     | update_server=False
[2025-06-06 03:00:02] 2025-06-06 00:59:35,485 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 03:00:02] 2025-06-06 00:59:35,632 | INFO     | all data control threads have been joined
[2025-06-06 03:00:02] 2025-06-06 00:59:35,815 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:00:02] 2025-06-06 00:59:35,815 | INFO     | aborting loop
[2025-06-06 03:00:02] 2025-06-06 00:59:35,833 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 03:00:02] 2025-06-06 00:59:35,972 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 03:00:02] 2025-06-06 00:59:35,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 03:00:02] 2025-06-06 00:59:35,972 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 03:00:02] 2025-06-06 00:59:36,486 | INFO     | [job] retrieve thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:36,498 | INFO     | [payload] validate_post thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:36,637 | INFO     | [data] control thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:36,705 | INFO     | [job] validate thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:36,774 | INFO     | all job control threads have been joined
[2025-06-06 03:00:02] 2025-06-06 00:59:36,820 | INFO     | [job] job monitor thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:36,831 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:36,891 | INFO     | all payload control threads have been joined
[2025-06-06 03:00:02] 2025-06-06 00:59:37,001 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:37,303 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:37,398 | INFO     | [payload] failed_post thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:37,616 | INFO     | [data] copytool_in thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:37,680 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:37,779 | INFO     | [job] control thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:37,839 | INFO     | [data] copytool_out thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:37,897 | INFO     | [payload] control thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:37,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 03:00:02] 2025-06-06 00:59:38,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 03:00:02] 2025-06-06 00:59:38,899 | INFO     | [job] queue monitor thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:42,814 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 03:00:02] 2025-06-06 00:59:44,805 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22580599838528)>', '<ExcThread(monitor, started 22580362708736)>']
[2025-06-06 03:00:02] 2025-06-06 00:59:45,017 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 03:00:02] 2025-06-06 00:59:45,017 | INFO     | [monitor] control thread has ended
[2025-06-06 03:00:02] 2025-06-06 00:59:49,816 | INFO     | all workflow threads have been joined
[2025-06-06 03:00:02] 2025-06-06 00:59:49,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 03:00:02] 2025-06-06 00:59:49,817 | INFO     | traces error code: 0
[2025-06-06 03:00:02] 2025-06-06 00:59:49,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 03:00:02] 2025-06-06 00:59:50,027 [wrapper] ==== pilot stdout END ====
[2025-06-06 03:00:02] 2025-06-06 00:59:50,032 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 03:00:02] 2025-06-06 00:59:50,035 [wrapper] pilotpid: 1438503
[2025-06-06 03:00:02] 2025-06-06 00:59:50,039 [wrapper] Pilot exit status: 0
[2025-06-06 03:00:02] 2025-06-06 00:59:50,052 [wrapper] pandaids: 6678213766
[2025-06-06 03:00:02] 2025-06-06 00:59:50,209 [wrapper] cleanup supervisor_pilot 1885191 1438504
[2025-06-06 03:00:02] 2025-06-06 00:59:50,213 [wrapper] Test setup, not cleaning
[2025-06-06 03:00:02] 2025-06-06 00:59:50,216 [wrapper] apfmon messages muted
[2025-06-06 03:00:02] 2025-06-06 00:59:50,221 [wrapper] ==== wrapper stdout END ====
[2025-06-06 03:00:02] 2025-06-06 00:59:50,224 [wrapper] ==== wrapper stderr END ====
[2025-06-06 03:00:02]  *** Error codes and diagnostics ***
[2025-06-06 03:00:02]     "exeErrorCode": 0,
[2025-06-06 03:00:02]     "exeErrorDiag": "",
[2025-06-06 03:00:02]     "pilotErrorCode": 0,
[2025-06-06 03:00:02]     "pilotErrorDiag": "",
[2025-06-06 03:00:02]  *** Listing of results directory ***
[2025-06-06 03:00:02] total 387972
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:53 pilot3.tar.gz
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:55 queuedata.json
[2025-06-06 03:00:02] -rwx------ 1 boinc boinc     37140 Jun  4 01:55 runpilot2-wrapper.sh
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc       100 Jun  6 00:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 03:00:02] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 00:44 run_atlas
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc       105 Jun  6 00:44 job.xml
[2025-06-06 03:00:02] -rw-r--r-- 2 boinc boinc 214078148 Jun  6 00:44 EVNT.45006593._001950.pool.root.1
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc      6687 Jun  6 00:44 init_data.xml
[2025-06-06 03:00:02] -rw-r--r-- 2 boinc boinc     15093 Jun  6 00:44 start_atlas.sh
[2025-06-06 03:00:02] drwxrwx--x 2 boinc boinc      4096 Jun  6 00:44 shared
[2025-06-06 03:00:02] -rw-r--r-- 2 boinc boinc    508881 Jun  6 00:44 input.tar.gz
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc         0 Jun  6 00:44 boinc_lockfile
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc      2524 Jun  6 00:44 pandaJob.out
[2025-06-06 03:00:02] -rw------- 1 boinc boinc    987721 Jun  6 00:44 agis_schedconf.cvmfs.json
[2025-06-06 03:00:02] -rw------- 1 boinc boinc   1598969 Jun  6 00:44 agis_ddmendpoints.agis.ALL.json
[2025-06-06 03:00:02] drwx------ 4 boinc boinc      4096 Jun  6 00:44 pilot3
[2025-06-06 03:00:02] -rw------- 1 boinc boinc        95 Jun  6 02:58 pilot_heartbeat.json
[2025-06-06 03:00:02] -rw------- 1 boinc boinc 177312240 Jun  6 02:58 HITS.45006595._048606.pool.root.1
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc       528 Jun  6 02:59 boinc_task_state.xml
[2025-06-06 03:00:02] -rw------- 1 boinc boinc      1026 Jun  6 02:59 memory_monitor_summary.json
[2025-06-06 03:00:02] -rw------- 1 boinc boinc    263240 Jun  6 02:59 log.45006595._048606.job.log.tgz.1
[2025-06-06 03:00:02] -rw------- 1 boinc boinc      7697 Jun  6 02:59 heartbeat.json
[2025-06-06 03:00:02] -rw------- 1 boinc boinc      4365 Jun  6 02:59 pilotlog.txt
[2025-06-06 03:00:02] -rw------- 1 boinc boinc    764144 Jun  6 02:59 log.45006595._048606.job.log.1
[2025-06-06 03:00:02] -rw------- 1 boinc boinc       357 Jun  6 02:59 output.list
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc       620 Jun  6 02:59 runtime_log
[2025-06-06 03:00:02] -rw------- 1 boinc boinc   1044480 Jun  6 02:59 result.tar.gz
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc      9040 Jun  6 02:59 runtime_log.err
[2025-06-06 03:00:02] -rw------- 1 boinc boinc       662 Jun  6 02:59 isbLDmoeqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSamKDmAL6Gdn.diag
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc        27 Jun  6 03:00 wrapper_checkpoint.txt
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc      8192 Jun  6 03:00 boinc_mmap_file
[2025-06-06 03:00:02] -rw-r--r-- 1 boinc boinc     20993 Jun  6 03:00 stderr.txt
[2025-06-06 03:00:02] HITS file was successfully produced:
[2025-06-06 03:00:02] -rw------- 1 boinc boinc 177312240 Jun  6 02:58 shared/HITS.pool.root.1
[2025-06-06 03:00:02]  *** Contents of shared directory: ***
[2025-06-06 03:00:02] total 383768
[2025-06-06 03:00:02] -rw-r--r-- 2 boinc boinc 214078148 Jun  6 00:44 ATLAS.root_0
[2025-06-06 03:00:02] -rw-r--r-- 2 boinc boinc     15093 Jun  6 00:44 start_atlas.sh
[2025-06-06 03:00:02] -rw-r--r-- 2 boinc boinc    508881 Jun  6 00:44 input.tar.gz
[2025-06-06 03:00:02] -rw------- 1 boinc boinc 177312240 Jun  6 02:58 HITS.pool.root.1
[2025-06-06 03:00:02] -rw------- 1 boinc boinc   1044480 Jun  6 02:59 result.tar.gz
03:00:03 (1434596): run_atlas exited; CPU time 30858.075118
03:00:03 (1434596): called boinc_finish(0)

</stderr_txt>
]]>

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