Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:58:22 (2363642): wrapper (7.7.26015): starting
15:58:22 (2363642): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 15:58:22] Arguments: --nthreads 8
[2025-06-04 15:58:22] Threads: 8
[2025-06-04 15:58:22] Checking for CVMFS
[2025-06-04 15:58:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:58:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:58:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:58:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:58:22] 2.12.7.0 1328384 2657 73368 146781 3 56 3007128 4096001 0 65024 0 2568005 99.993 606413 2342 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-04 15:58:22] CVMFS is ok
[2025-06-04 15:58:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 15:58:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 15:58:22] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-04 15:58:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-04 15:58:22] Further information can be found at the LHC@home message board.
[2025-06-04 15:58:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:58:22] Checking for apptainer binary...
[2025-06-04 15:58:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:58:22] Running /usr/bin/apptainer --version
[2025-06-04 15:58:22] apptainer version 1.3.6-1.el8
[2025-06-04 15:58:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:58:22] localhost.localdomain
[2025-06-04 15:58:22] apptainer works
[2025-06-04 15:58:22] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:58:22] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:58:22] Starting ATLAS job with PandaID=6678212595
[2025-06-04 15:58:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:08:22]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:08:22]  is_tar=False
[2025-06-04 17:08:22]  lfn=log.45006595._048454.job.log.tgz.1
[2025-06-04 17:08:22]  mtime=0
[2025-06-04 17:08:22]  protocol_id=None
[2025-06-04 17:08:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 17:08:22]  replicas=None
[2025-06-04 17:08:22]  scope=mc23_13p6TeV
[2025-06-04 17:08:22]  status=None
[2025-06-04 17:08:22]  status_code=0
[2025-06-04 17:08:22]  storage_token=
[2025-06-04 17:08:22]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6678212595/log.45006595._048454.job.log.tgz.1
[2025-06-04 17:08:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/b2/log.45006595._048454.job.log.tgz.1
[2025-06-04 17:08:22]  workdir=None
[2025-06-04 17:08:22] ]
[2025-06-04 17:08:22] 2025-06-04 15:07:53,533 | INFO     | transferring file log.45006595._048454.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6678212595/log.45006595._048454.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-06-04 17:08:22] 2025-06-04 15:07:53,533 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6678212595/log.45006595._048454.job.log.tgz.1 /var/lib/boinc/slots/0/log.45006595._048454.job
[2025-06-04 17:08:22] 2025-06-04 15:07:53,545 | INFO     | adding to output.list: log.45006595._048454.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/b2/log.45006595._048454.job.log.tg
[2025-06-04 17:08:22] 2025-06-04 15:07:53,545 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 17:08:22] 2025-06-04 15:07:53,546 | INFO     | summary of transferred files:
[2025-06-04 17:08:22] 2025-06-04 15:07:53,546 | INFO     |  -- lfn=log.45006595._048454.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 17:08:22] 2025-06-04 15:07:53,546 | INFO     | stage-out finished correctly
[2025-06-04 17:08:22] 2025-06-04 15:07:55,013 | INFO     | PID=2367291 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 17:08:22] 2025-06-04 15:07:55,705 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 17:08:22] 2025-06-04 15:07:57,151 | INFO     | job 6678212595 has state=finished
[2025-06-04 17:08:22] 2025-06-04 15:07:57,151 | INFO     | preparing for final server update for job 6678212595 in state='finished'
[2025-06-04 17:08:22] 2025-06-04 15:07:57,151 | INFO     | this job has now completed (state=finished)
[2025-06-04 17:08:22] 2025-06-04 15:07:57,151 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 17:08:22] 2025-06-04 15:07:57,151 | INFO     | log transfer has been attempted: DONE
[2025-06-04 17:08:22] 2025-06-04 15:07:57,152 | INFO     | job 6678212595 has finished - writing final server update
[2025-06-04 17:08:22] 2025-06-04 15:07:57,152 | INFO     | total number of processed events: 400 (read)
[2025-06-04 17:08:22] 2025-06-04 15:07:57,153 | INFO     | executing command: lscpu
[2025-06-04 17:08:22] 2025-06-04 15:07:57,168 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:08:22] 2025-06-04 15:07:59,464 | WARNING  | process 2373728 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 17:08:22] 2025-06-04 15:07:59,464 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678212595/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:08:22] 2025-06-04 15:07:59,547 | INFO     | number of running child processes to parent process 2373728: 1
[2025-06-04 17:08:22] 2025-06-04 15:07:59,547 | INFO     | maximum number of monitored processes: 6
[2025-06-04 17:08:22] 2025-06-04 15:08:02,050 | INFO     | monitor loop #311: job 0:6678212595 is in state 'finished'
[2025-06-04 17:08:22] 2025-06-04 15:08:02,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:08:22] 2025-06-04 15:08:03,654 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:08:22] 2025-06-04 15:08:03,654 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6678212595/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:08:22] 2025-06-04 15:08:03,655 | INFO     | extracted standard info from prmon json
[2025-06-04 17:08:22] 2025-06-04 15:08:03,655 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:08:22] 2025-06-04 15:08:03,655 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:08:22] 2025-06-04 15:08:03,655 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:08:22] 2025-06-04 15:08:03,655 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:08:22] 2025-06-04 15:08:03,656 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:08:22] 2025-06-04 15:08:03,657 | INFO     | sum of square deviations: 70364110.0
[2025-06-04 17:08:22] 2025-06-04 15:08:03,657 | INFO     | sum of deviations: -11531143234.999998
[2025-06-04 17:08:22] 2025-06-04 15:08:03,657 | INFO     | mean x: 1749047667.0
[2025-06-04 17:08:22] 2025-06-04 15:08:03,657 | INFO     | mean y: 2749392.6885245903
[2025-06-04 17:08:22] 2025-06-04 15:08:03,657 | INFO     | -- intersect: 286633521430.01807
[2025-06-04 17:08:22] 2025-06-04 15:08:03,657 | INFO     | intersect: 286633521430.01807
[2025-06-04 17:08:22] 2025-06-04 15:08:03,657 | INFO     | chi2: 0.09755026343331501
[2025-06-04 17:08:22] 2025-06-04 15:08:03,657 | INFO     | -- intersect: 286633521430.01807
[2025-06-04 17:08:22] 2025-06-04 15:08:03,657 | INFO     | current memory leak: -163.88 B/s (using 61 data points, chi2=0.10)
[2025-06-04 17:08:22] 2025-06-04 15:08:03,658 | INFO     | ..............................
[2025-06-04 17:08:22] 2025-06-04 15:08:03,658 | INFO     | . Timing measurements:
[2025-06-04 17:08:22] 2025-06-04 15:08:03,658 | INFO     | . get job = 0 s
[2025-06-04 17:08:22] 2025-06-04 15:08:03,658 | INFO     | . initial setup = 1 s
[2025-06-04 17:08:22] 2025-06-04 15:08:03,658 | INFO     | . payload setup = 4 s
[2025-06-04 17:08:22] 2025-06-04 15:08:03,658 | INFO     | . stage-in = 0 s
[2025-06-04 17:08:22] 2025-06-04 15:08:03,658 | INFO     | . payload execution = 4141 s
[2025-06-04 17:08:22] 2025-06-04 15:08:03,658 | INFO     | . stage-out = 0 s
[2025-06-04 17:08:22] 2025-06-04 15:08:03,658 | INFO     | . log creation = 0 s
[2025-06-04 17:08:22] 2025-06-04 15:08:03,658 | INFO     | ..............................
[2025-06-04 17:08:22] 2025-06-04 15:08:03,716 | INFO     | 
[2025-06-04 17:08:22] 2025-06-04 15:08:03,716 | INFO     | job summary report
[2025-06-04 17:08:22] 2025-06-04 15:08:03,716 | INFO     | --------------------------------------------------
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | PanDA job id: 6678212595
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | task id: 45006595
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | errors: (none)
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | pilot state: finished 
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | transexitcode: 0
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | exeerrorcode: 0
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | exeerrordiag: 
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | exitcode: 0
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | exitmsg: OK
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | cpuconsumptiontime: 29458 s
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | nevents: 400
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | neventsw: 0
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | pid: 2373728
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | pgrp: 2373728
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | corecount: 8
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | event service: False
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | sizes: {0: 2397165, 1: 2397364, 3: 2397570, 11: 2397598, 4149: 2423468, 4150: 2432409, 4152: 2432593, 4160: 2432763}
[2025-06-04 17:08:22] 2025-06-04 15:08:03,717 | INFO     | --------------------------------------------------
[2025-06-04 17:08:22] 2025-06-04 15:08:03,718 | INFO     | 
[2025-06-04 17:08:22] 2025-06-04 15:08:03,718 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-06-04 17:08:22] 2025-06-04 15:08:03,732 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,732 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,732 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,733 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:08:22] 2025-06-04 15:08:03,734 | INFO     | job 6678212595 has completed (purged errors)
[2025-06-04 17:08:22] 2025-06-04 15:08:03,734 | INFO     | overall cleanup function is called
[2025-06-04 17:08:22] 2025-06-04 15:08:04,741 | INFO     | --- collectZombieJob: --- 10, [2373728]
[2025-06-04 17:08:22] 2025-06-04 15:08:04,741 | INFO     | zombie collector waiting for pid 2373728
[2025-06-04 17:08:22] 2025-06-04 15:08:04,741 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:08:22] 2025-06-04 15:08:04,741 | INFO     | collected zombie processes
[2025-06-04 17:08:22] 2025-06-04 15:08:04,741 | INFO     | will attempt to kill all subprocesses of pid=2373728
[2025-06-04 17:08:22] 2025-06-04 15:08:04,812 | INFO     | process IDs to be killed: [2373728] (in reverse order)
[2025-06-04 17:08:22] 2025-06-04 15:08:04,841 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:08:22] 2025-06-04 15:08:04,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:08:22] 2025-06-04 15:08:04,843 | INFO     | did not find any defunct processes belonging to 2373728
[2025-06-04 17:08:22] 2025-06-04 15:08:04,845 | INFO     | did not find any defunct processes belonging to 2373728
[2025-06-04 17:08:22] 2025-06-04 15:08:04,845 | INFO     | ready for new job
[2025-06-04 17:08:22] 2025-06-04 15:08:04,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:08:22] 2025-06-04 15:08:04,846 | INFO     | **************************************
[2025-06-04 17:08:22] 2025-06-04 15:08:04,846 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:08:22] 2025-06-04 15:08:04,846 | INFO     | **************************************
[2025-06-04 17:08:22] 2025-06-04 15:08:04,846 | INFO     | 
[2025-06-04 17:08:22] 2025-06-04 15:08:04,847 | INFO     | pilot is running in a VM
[2025-06-04 17:08:22] 2025-06-04 15:08:04,847 | INFO     | architecture information:
[2025-06-04 17:08:22] 2025-06-04 15:08:04,847 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:08:22] 2025-06-04 15:08:04,858 | INFO     | cat /etc/os-release:
[2025-06-04 17:08:22] NAME="CentOS Linux"
[2025-06-04 17:08:22] VERSION="7 (Core)"
[2025-06-04 17:08:22] ID="centos"
[2025-06-04 17:08:22] ID_LIKE="rhel fedora"
[2025-06-04 17:08:22] VERSION_ID="7"
[2025-06-04 17:08:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:08:22] ANSI_COLOR="0;31"
[2025-06-04 17:08:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:08:22] HOME_URL="https://www.centos.org/"
[2025-06-04 17:08:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:08:22] 
[2025-06-04 17:08:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:08:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:08:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:08:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:08:22] 
[2025-06-04 17:08:22] 2025-06-04 15:08:04,858 | INFO     | **************************************
[2025-06-04 17:08:22] 2025-06-04 15:08:05,361 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-06-04 17:08:22] 2025-06-04 15:08:05,374 | INFO     | sufficient remaining disk space (41490055168 B)
[2025-06-04 17:08:22] 2025-06-04 15:08:05,374 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:08:22] 2025-06-04 15:08:05,374 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:08:22] 2025-06-04 15:08:05,374 | INFO     | update_server=False
[2025-06-04 17:08:22] 2025-06-04 15:08:05,374 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:08:22] 2025-06-04 15:08:05,375 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:08:22] 2025-06-04 15:08:05,375 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 17:08:22] 2025-06-04 15:08:05,375 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:08:22] 2025-06-04 15:08:05,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:08:22] 2025-06-04 15:08:05,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:08:22] 2025-06-04 15:08:05,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:08:22] 2025-06-04 15:08:05,559 | INFO     | aborting loop
[2025-06-04 17:08:22] 2025-06-04 15:08:05,851 | INFO     | all data control threads have been joined
[2025-06-04 17:08:22] 2025-06-04 15:08:06,257 | INFO     | all job control threads have been joined
[2025-06-04 17:08:22] 2025-06-04 15:08:06,269 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:08:22] 2025-06-04 15:08:06,379 | INFO     | all payload control threads have been joined
[2025-06-04 17:08:22] 2025-06-04 15:08:06,380 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:06,380 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:06,564 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:06,619 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:08:22] 2025-06-04 15:08:06,661 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:06,856 | INFO     | [data] control thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:06,859 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:06,921 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:06,977 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:07,260 | INFO     | [job] control thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:07,315 | INFO     | [job] validate thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:07,385 | INFO     | [payload] control thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:07,489 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:07,510 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:08,625 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:10,275 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:15,781 | INFO     | job.realtimelogging is not enabled
[2025-06-04 17:08:22] 2025-06-04 15:08:16,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:08:22] 2025-06-04 15:08:17,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139904299341632)>', '<ExcThread(monitor, started 139904072451840)>']
[2025-06-04 17:08:22] 2025-06-04 15:08:17,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:08:22] 2025-06-04 15:08:17,427 | INFO     | [monitor] control thread has ended
[2025-06-04 17:08:22] 2025-06-04 15:08:22,451 | INFO     | all workflow threads have been joined
[2025-06-04 17:08:22] 2025-06-04 15:08:22,451 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:08:22] 2025-06-04 15:08:22,451 | INFO     | traces error code: 0
[2025-06-04 17:08:22] 2025-06-04 15:08:22,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:08:22] 2025-06-04 15:08:22,528 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:08:22] 2025-06-04 15:08:22,531 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:08:22] 2025-06-04 15:08:22,533 [wrapper] pilotpid: 2367291
[2025-06-04 17:08:22] 2025-06-04 15:08:22,535 [wrapper] Pilot exit status: 0
[2025-06-04 17:08:22] 2025-06-04 15:08:22,544 [wrapper] pandaids: 6678212595
[2025-06-04 17:08:22] 2025-06-04 15:08:22,569 [wrapper] cleanup supervisor_pilot 2385095 2367292
[2025-06-04 17:08:22] 2025-06-04 15:08:22,572 [wrapper] Test setup, not cleaning
[2025-06-04 17:08:22] 2025-06-04 15:08:22,574 [wrapper] apfmon messages muted
[2025-06-04 17:08:22] 2025-06-04 15:08:22,577 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:08:22] 2025-06-04 15:08:22,580 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:08:22]  *** Error codes and diagnostics ***
[2025-06-04 17:08:22]     "exeErrorCode": 0,
[2025-06-04 17:08:22]     "exeErrorDiag": "",
[2025-06-04 17:08:22]     "pilotErrorCode": 0,
[2025-06-04 17:08:22]     "pilotErrorDiag": "",
[2025-06-04 17:08:22]  *** Listing of results directory ***
[2025-06-04 17:08:22] total 389248
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:42 pilot3.tar.gz
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc      5111 Jun  4 01:46 queuedata.json
[2025-06-04 17:08:22] -rwx------. 1 boinc boinc     37140 Jun  4 01:46 runpilot2-wrapper.sh
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc       100 Jun  4 15:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:08:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 15:58 run_atlas
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc       105 Jun  4 15:58 job.xml
[2025-06-04 17:08:22] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:58 start_atlas.sh
[2025-06-04 17:08:22] drwxrwx--x. 2 boinc boinc        68 Jun  4 15:58 shared
[2025-06-04 17:08:22] -rw-r--r--. 2 boinc boinc    508877 Jun  4 15:58 input.tar.gz
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc      6076 Jun  4 15:58 init_data.xml
[2025-06-04 17:08:22] -rw-r--r--. 2 boinc boinc 213450175 Jun  4 15:58 EVNT.45006593._001944.pool.root.1
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc         0 Jun  4 15:58 boinc_lockfile
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc      2522 Jun  4 15:58 pandaJob.out
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc    986819 Jun  4 15:58 agis_schedconf.cvmfs.json
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc   1598969 Jun  4 15:58 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:08:22] drwx------. 4 boinc boinc      4096 Jun  4 15:58 pilot3
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc        95 Jun  4 17:07 pilot_heartbeat.json
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc 179949855 Jun  4 17:07 HITS.45006595._048454.pool.root.1
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc       529 Jun  4 17:07 boinc_task_state.xml
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc      1034 Jun  4 17:07 memory_monitor_summary.json
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc    281533 Jun  4 17:07 log.45006595._048454.job.log.tgz.1
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc      7730 Jun  4 17:08 heartbeat.json
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc      8192 Jun  4 17:08 boinc_mmap_file
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc        27 Jun  4 17:08 wrapper_checkpoint.txt
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc      4610 Jun  4 17:08 pilotlog.txt
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc    404408 Jun  4 17:08 log.45006595._048454.job.log.1
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc       357 Jun  4 17:08 output.list
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc       620 Jun  4 17:08 runtime_log
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc    706560 Jun  4 17:08 result.tar.gz
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc      8662 Jun  4 17:08 runtime_log.err
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc       663 Jun  4 17:08 jriKDmOWqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdXmKDm2WJhEn.diag
[2025-06-04 17:08:22] -rw-r--r--. 1 boinc boinc     21750 Jun  4 17:08 stderr.txt
[2025-06-04 17:08:22] HITS file was successfully produced:
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc 179949855 Jun  4 17:07 shared/HITS.pool.root.1
[2025-06-04 17:08:22]  *** Contents of shared directory: ***
[2025-06-04 17:08:22] total 385392
[2025-06-04 17:08:22] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:58 start_atlas.sh
[2025-06-04 17:08:22] -rw-r--r--. 2 boinc boinc    508877 Jun  4 15:58 input.tar.gz
[2025-06-04 17:08:22] -rw-r--r--. 2 boinc boinc 213450175 Jun  4 15:58 ATLAS.root_0
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc 179949855 Jun  4 17:07 HITS.pool.root.1
[2025-06-04 17:08:22] -rw-------. 1 boinc boinc    706560 Jun  4 17:08 result.tar.gz
17:08:24 (2363642): run_atlas exited; CPU time 29483.226114
17:08:24 (2363642): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN