Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:39:37 (1202764): wrapper (7.7.26015): starting
16:39:37 (1202764): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 16:39:37] Arguments: --nthreads 3
[2025-06-04 16:39:37] Threads: 3
[2025-06-04 16:39:37] Checking for CVMFS
[2025-06-04 16:39:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:39:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:39:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:39:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:39:37] 2.9.2.0 323842 2583 83040 146782 1 56 26233951 36864001 0 130560 0 2400309 99.993 602538 43868 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 16:39:37] CVMFS is ok
[2025-06-04 16:39:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:39:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:39:37] Further information can be found at the LHC@home message board.
[2025-06-04 16:39:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:39:37] Checking for apptainer binary...
[2025-06-04 16:39:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:39:37] Running /usr/bin/apptainer --version
[2025-06-04 16:39:37] apptainer version 1.3.6-6.1
[2025-06-04 16:39:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:39:37] thA331b
[2025-06-04 16:39:37] apptainer works
[2025-06-04 16:39:37] Set ATHENA_PROC_NUMBER=3
[2025-06-04 16:39:37] Set ATHENA_CORE_NUMBER=3
[2025-06-04 16:39:37] Starting ATLAS job with PandaID=6678156249
[2025-06-04 16:39:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:52:25]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:52:25]  filesize=211234
[2025-06-04 17:52:25]  filetype=log
[2025-06-04 17:52:25]  guid=bead7266-40f9-4187-91d4-80c0eac82fe8
[2025-06-04 17:52:25]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 17:52:25]  is_altstaged=None
[2025-06-04 17:52:25]  is_tar=False
[2025-06-04 17:52:25]  lfn=log.45006595._048236.job.log.tgz.1
[2025-06-04 17:52:25]  mtime=0
[2025-06-04 17:52:25]  protocol_id=None
[2025-06-04 17:52:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 17:52:25]  replicas=None
[2025-06-04 17:52:25]  scope=mc23_13p6TeV
[2025-06-04 17:52:25]  status=None
[2025-06-04 17:52:25]  status_code=0
[2025-06-04 17:52:25]  storage_token=
[2025-06-04 17:52:25]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678156249/log.45006595._048236.job.log.tgz.1
[2025-06-04 17:52:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/92/log.45006595._048236.job.log.tgz.1
[2025-06-04 17:52:25]  workdir=None
[2025-06-04 17:52:25] ]
[2025-06-04 17:52:25] 2025-06-04 15:52:08,371 | INFO     | transferring file log.45006595._048236.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678156249/log.45006595._048236.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 17:52:25] 2025-06-04 15:52:08,372 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678156249/log.45006595._048236.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0482
[2025-06-04 17:52:25] 2025-06-04 15:52:08,384 | INFO     | adding to output.list: log.45006595._048236.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/92/log.45006595._048236.job.log.tg
[2025-06-04 17:52:25] 2025-06-04 15:52:08,384 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 17:52:25] 2025-06-04 15:52:08,384 | INFO     | summary of transferred files:
[2025-06-04 17:52:25] 2025-06-04 15:52:08,384 | INFO     |  -- lfn=log.45006595._048236.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 17:52:25] 2025-06-04 15:52:08,385 | INFO     | stage-out finished correctly
[2025-06-04 17:52:25] 2025-06-04 15:52:08,597 | INFO     | monitor loop #337: job 0:6678156249 is in state 'finished'
[2025-06-04 17:52:25] 2025-06-04 15:52:08,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:25] 2025-06-04 15:52:09,741 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 17:52:25] 2025-06-04 15:52:10,225 | INFO     | job 6678156249 has state=finished
[2025-06-04 17:52:25] 2025-06-04 15:52:10,225 | INFO     | preparing for final server update for job 6678156249 in state='finished'
[2025-06-04 17:52:25] 2025-06-04 15:52:10,226 | INFO     | this job has now completed (state=finished)
[2025-06-04 17:52:25] 2025-06-04 15:52:10,226 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 17:52:25] 2025-06-04 15:52:10,226 | INFO     | log transfer has been attempted: DONE
[2025-06-04 17:52:25] 2025-06-04 15:52:10,226 | INFO     | job 6678156249 has finished - writing final server update
[2025-06-04 17:52:25] 2025-06-04 15:52:10,226 | INFO     | total number of processed events: 400 (read)
[2025-06-04 17:52:25] 2025-06-04 15:52:10,227 | INFO     | executing command: lscpu
[2025-06-04 17:52:25] 2025-06-04 15:52:10,244 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:52:25] 2025-06-04 15:52:11,100 | INFO     | monitor loop #338: job 0:6678156249 is in state 'finished'
[2025-06-04 17:52:25] 2025-06-04 15:52:11,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 17:52:25] 2025-06-04 15:52:13,537 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:52:25] 2025-06-04 15:52:13,537 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678156249/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:52:25] 2025-06-04 15:52:13,537 | INFO     | extracted standard info from prmon json
[2025-06-04 17:52:25] 2025-06-04 15:52:13,537 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:52:25] 2025-06-04 15:52:13,537 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:52:25] 2025-06-04 15:52:13,538 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:52:25] 2025-06-04 15:52:13,538 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:52:25] 2025-06-04 15:52:13,538 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:52:25] 2025-06-04 15:52:13,538 | INFO     | sum of square deviations: 81266640.0
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | sum of deviations: -2406315708.5
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | mean x: 1749050228.5
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | mean y: 2369572.609375
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | -- intersect: 51791972782.42664
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | intersect: 51791972782.42664
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | chi2: 0.0798465992165037
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | -- intersect: 51791972782.42664
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | current memory leak: -29.61 B/s (using 64 data points, chi2=0.08)
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | ..............................
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | . Timing measurements:
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | . get job = 0 s
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | . initial setup = 1 s
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | . payload setup = 3 s
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | . stage-in = 0 s
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | . payload execution = 4324 s
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | . stage-out = 0 s
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | . log creation = 0 s
[2025-06-04 17:52:25] 2025-06-04 15:52:13,539 | INFO     | ..............................
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | 
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | job summary report
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | --------------------------------------------------
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | PanDA job id: 6678156249
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | task id: 45006595
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | errors: (none)
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | pilot state: finished 
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | transexitcode: 0
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | exeerrorcode: 0
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | exeerrordiag: 
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | exitcode: 0
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | exitmsg: OK
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | cpuconsumptiontime: 12415 s
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | nevents: 400
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | neventsw: 0
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | pid: 1212892
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | pgrp: 1212892
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | corecount: 3
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | event service: False
[2025-06-04 17:52:25] 2025-06-04 15:52:13,972 | INFO     | sizes: {0: 2397343, 2: 2397549, 11: 2397577, 4331: 2423660, 4333: 2432607, 4334: 2432663, 4338: 2432961}
[2025-06-04 17:52:25] 2025-06-04 15:52:13,973 | INFO     | --------------------------------------------------
[2025-06-04 17:52:25] 2025-06-04 15:52:13,973 | INFO     | 
[2025-06-04 17:52:25] 2025-06-04 15:52:13,973 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 17:52:25] 2025-06-04 15:52:13,988 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,988 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,988 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,988 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | job 6678156249 has completed (purged errors)
[2025-06-04 17:52:25] 2025-06-04 15:52:13,989 | INFO     | overall cleanup function is called
[2025-06-04 17:52:25] 2025-06-04 15:52:14,996 | INFO     | --- collectZombieJob: --- 10, [1212892]
[2025-06-04 17:52:25] 2025-06-04 15:52:14,996 | INFO     | zombie collector waiting for pid 1212892
[2025-06-04 17:52:25] 2025-06-04 15:52:14,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:52:25] 2025-06-04 15:52:14,996 | INFO     | collected zombie processes
[2025-06-04 17:52:25] 2025-06-04 15:52:14,996 | INFO     | will attempt to kill all subprocesses of pid=1212892
[2025-06-04 17:52:25] 2025-06-04 15:52:15,037 | INFO     | process IDs to be killed: [1212892] (in reverse order)
[2025-06-04 17:52:25] 2025-06-04 15:52:15,060 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:52:25] 2025-06-04 15:52:15,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:52:25] 2025-06-04 15:52:15,061 | INFO     | did not find any defunct processes belonging to 1212892
[2025-06-04 17:52:25] 2025-06-04 15:52:15,062 | INFO     | did not find any defunct processes belonging to 1212892
[2025-06-04 17:52:25] 2025-06-04 15:52:15,062 | INFO     | ready for new job
[2025-06-04 17:52:25] 2025-06-04 15:52:15,062 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:52:25] 2025-06-04 15:52:15,063 | INFO     | **************************************
[2025-06-04 17:52:25] 2025-06-04 15:52:15,063 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:52:25] 2025-06-04 15:52:15,063 | INFO     | **************************************
[2025-06-04 17:52:25] 2025-06-04 15:52:15,063 | INFO     | 
[2025-06-04 17:52:25] 2025-06-04 15:52:15,063 | INFO     | architecture information:
[2025-06-04 17:52:25] 2025-06-04 15:52:15,063 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:52:25] 2025-06-04 15:52:15,071 | INFO     | cat /etc/os-release:
[2025-06-04 17:52:25] NAME="CentOS Linux"
[2025-06-04 17:52:25] VERSION="7 (Core)"
[2025-06-04 17:52:25] ID="centos"
[2025-06-04 17:52:25] ID_LIKE="rhel fedora"
[2025-06-04 17:52:25] VERSION_ID="7"
[2025-06-04 17:52:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:52:25] ANSI_COLOR="0;31"
[2025-06-04 17:52:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:52:25] HOME_URL="https://www.centos.org/"
[2025-06-04 17:52:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:52:25] 
[2025-06-04 17:52:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:52:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:52:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:52:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:52:25] 
[2025-06-04 17:52:25] 2025-06-04 15:52:15,072 | INFO     | **************************************
[2025-06-04 17:52:25] 2025-06-04 15:52:15,575 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 17:52:25] 2025-06-04 15:52:15,587 | INFO     | sufficient remaining disk space (233298722816 B)
[2025-06-04 17:52:25] 2025-06-04 15:52:15,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:52:25] 2025-06-04 15:52:15,588 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:52:25] 2025-06-04 15:52:15,588 | INFO     | update_server=False
[2025-06-04 17:52:25] 2025-06-04 15:52:15,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:52:25] 2025-06-04 15:52:15,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:52:25] 2025-06-04 15:52:15,588 | INFO     | aborting loop
[2025-06-04 17:52:25] 2025-06-04 15:52:15,588 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 17:52:25] 2025-06-04 15:52:15,588 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:52:25] 2025-06-04 15:52:15,588 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:52:25] 2025-06-04 15:52:15,588 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:52:25] 2025-06-04 15:52:15,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:52:25] 2025-06-04 15:52:15,811 | INFO     | all job control threads have been joined
[2025-06-04 17:52:25] 2025-06-04 15:52:16,294 | INFO     | all payload control threads have been joined
[2025-06-04 17:52:25] 2025-06-04 15:52:16,426 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:52:25] 2025-06-04 15:52:16,452 | INFO     | all data control threads have been joined
[2025-06-04 17:52:25] 2025-06-04 15:52:16,593 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:16,594 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:16,594 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:16,640 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:16,814 | INFO     | [job] control thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:16,970 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:17,300 | INFO     | [payload] control thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:17,427 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:17,457 | INFO     | [data] control thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:17,479 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:17,817 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:17,825 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:17,989 | INFO     | [job] validate thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:18,433 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:18,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:52:25] 2025-06-04 15:52:19,589 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:19,787 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:52:25] 2025-06-04 15:52:20,500 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482980689728)>', '<ExcThread(monitor, started 140482625640192)>']
[2025-06-04 17:52:25] 2025-06-04 15:52:20,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:52:25] 2025-06-04 15:52:20,616 | INFO     | [monitor] control thread has ended
[2025-06-04 17:52:25] 2025-06-04 15:52:25,518 | INFO     | all workflow threads have been joined
[2025-06-04 17:52:25] 2025-06-04 15:52:25,518 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:52:25] 2025-06-04 15:52:25,518 | INFO     | traces error code: 0
[2025-06-04 17:52:25] 2025-06-04 15:52:25,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:52:25] 2025-06-04 15:52:25,569 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:52:25] 2025-06-04 15:52:25,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:52:25] 2025-06-04 15:52:25,574 [wrapper] pilotpid: 1206402
[2025-06-04 17:52:25] 2025-06-04 15:52:25,576 [wrapper] Pilot exit status: 0
[2025-06-04 17:52:25] 2025-06-04 15:52:25,583 [wrapper] pandaids: 6678156249
[2025-06-04 17:52:25] 2025-06-04 15:52:25,598 [wrapper] cleanup supervisor_pilot 1222302 1206403
[2025-06-04 17:52:25] 2025-06-04 15:52:25,600 [wrapper] Test setup, not cleaning
[2025-06-04 17:52:25] 2025-06-04 15:52:25,602 [wrapper] apfmon messages muted
[2025-06-04 17:52:25] 2025-06-04 15:52:25,605 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:52:25] 2025-06-04 15:52:25,607 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:52:25]  *** Error codes and diagnostics ***
[2025-06-04 17:52:25]     "exeErrorCode": 0,
[2025-06-04 17:52:25]     "exeErrorDiag": "",
[2025-06-04 17:52:25]     "pilotErrorCode": 0,
[2025-06-04 17:52:25]     "pilotErrorDiag": "",
[2025-06-04 17:52:25]  *** Listing of results directory ***
[2025-06-04 17:52:25] total 393508
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:42 pilot3.tar.gz
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:43 queuedata.json
[2025-06-04 17:52:25] -rwx------ 1 boinc boinc     37140 Jun  4 01:43 runpilot2-wrapper.sh
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc       100 Jun  4 16:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:52:25] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 16:39 run_atlas
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc       105 Jun  4 16:39 job.xml
[2025-06-04 17:52:25] -rw-r--r-- 2 boinc boinc 213849285 Jun  4 16:39 EVNT.45006593._001937.pool.root.1
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc      6923 Jun  4 16:39 init_data.xml
[2025-06-04 17:52:25] drwxrwx--x 2 boinc boinc      4096 Jun  4 16:39 shared
[2025-06-04 17:52:25] -rw-r--r-- 2 boinc boinc    508878 Jun  4 16:39 input.tar.gz
[2025-06-04 17:52:25] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:39 start_atlas.sh
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc         0 Jun  4 16:39 boinc_lockfile
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc      2524 Jun  4 16:39 pandaJob.out
[2025-06-04 17:52:25] -rw------- 1 boinc boinc    986819 Jun  4 16:39 agis_schedconf.cvmfs.json
[2025-06-04 17:52:25] -rw------- 1 boinc boinc   1598969 Jun  4 16:39 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:52:25] drwx------ 4 boinc boinc      4096 Jun  4 16:39 pilot3
[2025-06-04 17:52:25] -rw------- 1 boinc boinc 183993204 Jun  4 17:51 HITS.45006595._048236.pool.root.1
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc       529 Jun  4 17:51 boinc_task_state.xml
[2025-06-04 17:52:25] -rw------- 1 boinc boinc        95 Jun  4 17:52 pilot_heartbeat.json
[2025-06-04 17:52:25] -rw------- 1 boinc boinc      1019 Jun  4 17:52 memory_monitor_summary.json
[2025-06-04 17:52:25] -rw------- 1 boinc boinc    211234 Jun  4 17:52 log.45006595._048236.job.log.tgz.1
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:52 boinc_mmap_file
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc        27 Jun  4 17:52 wrapper_checkpoint.txt
[2025-06-04 17:52:25] -rw------- 1 boinc boinc      7653 Jun  4 17:52 heartbeat.json
[2025-06-04 17:52:25] -rw------- 1 boinc boinc      4480 Jun  4 17:52 pilotlog.txt
[2025-06-04 17:52:25] -rw------- 1 boinc boinc    429826 Jun  4 17:52 log.45006595._048236.job.log.1
[2025-06-04 17:52:25] -rw------- 1 boinc boinc       357 Jun  4 17:52 output.list
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:52 runtime_log
[2025-06-04 17:52:25] -rw------- 1 boinc boinc    655360 Jun  4 17:52 result.tar.gz
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc      8738 Jun  4 17:52 runtime_log.err
[2025-06-04 17:52:25] -rw------- 1 boinc boinc       659 Jun  4 17:52 mShLDmTTqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQXmKDmSy2iKo.diag
[2025-06-04 17:52:25] -rw-r--r-- 1 boinc boinc     21125 Jun  4 17:52 stderr.txt
[2025-06-04 17:52:25] HITS file was successfully produced:
[2025-06-04 17:52:25] -rw------- 1 boinc boinc 183993204 Jun  4 17:51 shared/HITS.pool.root.1
[2025-06-04 17:52:25]  *** Contents of shared directory: ***
[2025-06-04 17:52:25] total 389688
[2025-06-04 17:52:25] -rw-r--r-- 2 boinc boinc 213849285 Jun  4 16:39 ATLAS.root_0
[2025-06-04 17:52:25] -rw-r--r-- 2 boinc boinc    508878 Jun  4 16:39 input.tar.gz
[2025-06-04 17:52:25] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:39 start_atlas.sh
[2025-06-04 17:52:25] -rw------- 1 boinc boinc 183993204 Jun  4 17:51 HITS.pool.root.1
[2025-06-04 17:52:25] -rw------- 1 boinc boinc    655360 Jun  4 17:52 result.tar.gz
17:52:27 (1202764): run_atlas exited; CPU time 12426.701232
17:52:27 (1202764): called boinc_finish(0)

</stderr_txt>
]]>

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