Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:34:05 (13218): wrapper (7.7.26015): starting
17:34:05 (13218): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 17:34:05] Arguments: --nthreads 8
[2025-06-04 17:34:05] Threads: 8
[2025-06-04 17:34:05] Checking for CVMFS
[2025-06-04 17:34:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 17:34:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 17:34:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 17:34:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 17:34:07] 2.11.2.0 6418 33406 93768 146786 1 16 23448331 25165825 3521 130560 0 17428498 99.746 20851887 2197 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 17:34:07] CVMFS is ok
[2025-06-04 17:34:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 17:34:07] Checking for apptainer binary...
[2025-06-04 17:34:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 17:34:07] Running /usr/bin/apptainer --version
[2025-06-04 17:34:07] apptainer version 1.3.2-1.el7
[2025-06-04 17:34:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 17:34:14] cg-vwn357.simple-grid.lan
[2025-06-04 17:34:14] apptainer works
[2025-06-04 17:34:14] Set ATHENA_PROC_NUMBER=8
[2025-06-04 17:34:14] Set ATHENA_CORE_NUMBER=8
[2025-06-04 17:34:14] Starting ATLAS job with PandaID=6678156175
[2025-06-04 17:34:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 21:39:06]  *** The last 200 lines of the pilot log: ***
[2025-06-04 21:39:07] 2025-06-04 19:38:38,693 | INFO     | extracted standard info from prmon json
[2025-06-04 21:39:07] 2025-06-04 19:38:38,693 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 21:39:07] 2025-06-04 19:38:38,694 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 21:39:07] 2025-06-04 19:38:38,694 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 21:39:07] 2025-06-04 19:38:38,694 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 21:39:07] 2025-06-04 19:38:38,699 | INFO     | fitting pss+swap vs Time
[2025-06-04 21:39:07] 2025-06-04 19:38:38,700 | INFO     | sum of square deviations: 3723716330.0
[2025-06-04 21:39:07] 2025-06-04 19:38:38,702 | INFO     | sum of deviations: 98666537908.0
[2025-06-04 21:39:07] 2025-06-04 19:38:38,702 | INFO     | mean x: 1749058900.0
[2025-06-04 21:39:07] 2025-06-04 19:38:38,702 | INFO     | mean y: 2434194.92139738
[2025-06-04 21:39:07] 2025-06-04 19:38:38,702 | INFO     | -- intersect: -46342016071.024284
[2025-06-04 21:39:07] 2025-06-04 19:38:38,703 | INFO     | intersect: -46342016071.024284
[2025-06-04 21:39:07] 2025-06-04 19:38:38,703 | INFO     | chi2: 6.13147592508623
[2025-06-04 21:39:07] 2025-06-04 19:38:38,703 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 21:39:07] 2025-06-04 19:38:38,705 | INFO     | sum of deviations: 96379328816.99998
[2025-06-04 21:39:07] 2025-06-04 19:38:38,705 | INFO     | mean x: 1749058747.5
[2025-06-04 21:39:07] 2025-06-04 19:38:38,706 | INFO     | mean y: 2432733.0089285714
[2025-06-04 21:39:07] 2025-06-04 19:38:38,706 | INFO     | -- intersect: -48367387232.41538
[2025-06-04 21:39:07] 2025-06-04 19:38:38,706 | INFO     | intersect: -48367387232.41538
[2025-06-04 21:39:07] 2025-06-04 19:38:38,706 | INFO     | chi2: 6.142681426386432
[2025-06-04 21:39:07] 2025-06-04 19:38:38,706 | INFO     | current chi2=6.142681426386432 (change=-0.18275373559499059 %)
[2025-06-04 21:39:07] 2025-06-04 19:38:38,706 | INFO     | right removable region: 223
[2025-06-04 21:39:07] 2025-06-04 19:38:38,707 | INFO     | sum of square deviations: 3485088600.0
[2025-06-04 21:39:07] 2025-06-04 19:38:38,708 | INFO     | sum of deviations: 20651077585.500008
[2025-06-04 21:39:07] 2025-06-04 19:38:38,709 | INFO     | mean x: 1749059052.5
[2025-06-04 21:39:07] 2025-06-04 19:38:38,709 | INFO     | mean y: 2484007.9151785714
[2025-06-04 21:39:07] 2025-06-04 19:38:38,709 | INFO     | -- intersect: -10361658296.759266
[2025-06-04 21:39:07] 2025-06-04 19:38:38,709 | INFO     | intersect: -10361658296.759266
[2025-06-04 21:39:07] 2025-06-04 19:38:38,710 | INFO     | chi2: 1.3829266437312784
[2025-06-04 21:39:07] 2025-06-04 19:38:38,710 | INFO     | current chi2=1.3829266437312784 (change=77.44545260182475 %)
[2025-06-04 21:39:07] 2025-06-04 19:38:38,710 | INFO     | sum of square deviations: 3256879670.0
[2025-06-04 21:39:07] 2025-06-04 19:38:38,712 | INFO     | sum of deviations: -15844142806.000004
[2025-06-04 21:39:07] 2025-06-04 19:38:38,712 | INFO     | mean x: 1749059205.0
[2025-06-04 21:39:07] 2025-06-04 19:38:38,713 | INFO     | mean y: 2508229.1187214614
[2025-06-04 21:39:07] 2025-06-04 19:38:38,713 | INFO     | -- intersect: 8511371505.65753
[2025-06-04 21:39:07] 2025-06-04 19:38:38,713 | INFO     | intersect: 8511371505.65753
[2025-06-04 21:39:07] 2025-06-04 19:38:38,713 | INFO     | chi2: 0.12086969628868133
[2025-06-04 21:39:07] 2025-06-04 19:38:38,713 | INFO     | current chi2=0.12086969628868133 (change=91.25986205873058 %)
[2025-06-04 21:39:07] 2025-06-04 19:38:38,714 | INFO     | sum of square deviations: 3038856977.5
[2025-06-04 21:39:07] 2025-06-04 19:38:38,716 | INFO     | sum of deviations: -13188450526.999998
[2025-06-04 21:39:07] 2025-06-04 19:38:38,716 | INFO     | mean x: 1749059357.5
[2025-06-04 21:39:07] 2025-06-04 19:38:38,716 | INFO     | mean y: 2506332.7102803737
[2025-06-04 21:39:07] 2025-06-04 19:38:38,716 | INFO     | -- intersect: 7593315303.30954
[2025-06-04 21:39:07] 2025-06-04 19:38:38,716 | INFO     | intersect: 7593315303.30954
[2025-06-04 21:39:07] 2025-06-04 19:38:38,717 | INFO     | chi2: 0.10313112243744148
[2025-06-04 21:39:07] 2025-06-04 19:38:38,717 | INFO     | current chi2=0.10313112243744148 (change=14.675782595559442 %)
[2025-06-04 21:39:07] 2025-06-04 19:38:38,717 | INFO     | left removable region: 30
[2025-06-04 21:39:07] 2025-06-04 19:38:38,717 | INFO     | sum of square deviations: 2229146912.0
[2025-06-04 21:39:07] 2025-06-04 19:38:38,719 | INFO     | sum of deviations: 3738306248.9999995
[2025-06-04 21:39:07] 2025-06-04 19:38:38,719 | INFO     | mean x: 1749059632.0
[2025-06-04 21:39:07] 2025-06-04 19:38:38,719 | INFO     | mean y: 2493198.1554404143
[2025-06-04 21:39:07] 2025-06-04 19:38:38,719 | INFO     | -- intersect: -2930700893.7103357
[2025-06-04 21:39:07] 2025-06-04 19:38:38,719 | INFO     | intersect: -2930700893.7103357
[2025-06-04 21:39:07] 2025-06-04 19:38:38,720 | INFO     | chi2: 0.000422280531128532
[2025-06-04 21:39:07] 2025-06-04 19:38:38,720 | INFO     | -- intersect: -2930700893.7103357
[2025-06-04 21:39:07] 2025-06-04 19:38:38,720 | INFO     | current memory leak: 1.68 B/s (using 193 data points, chi2=0.00)
[2025-06-04 21:39:07] 2025-06-04 19:38:38,721 | INFO     | ..............................
[2025-06-04 21:39:07] 2025-06-04 19:38:38,721 | INFO     | . Timing measurements:
[2025-06-04 21:39:07] 2025-06-04 19:38:38,721 | INFO     | . get job = 0 s
[2025-06-04 21:39:07] 2025-06-04 19:38:38,721 | INFO     | . initial setup = 10 s
[2025-06-04 21:39:07] 2025-06-04 19:38:38,721 | INFO     | . payload setup = 161 s
[2025-06-04 21:39:07] 2025-06-04 19:38:38,721 | INFO     | . stage-in = 0 s
[2025-06-04 21:39:07] 2025-06-04 19:38:38,721 | INFO     | . payload execution = 14099 s
[2025-06-04 21:39:07] 2025-06-04 19:38:38,721 | INFO     | . stage-out = 1 s
[2025-06-04 21:39:07] 2025-06-04 19:38:38,721 | INFO     | . log creation = 0 s
[2025-06-04 21:39:07] 2025-06-04 19:38:38,722 | INFO     | ..............................
[2025-06-04 21:39:07] 2025-06-04 19:38:39,100 | INFO     | 
[2025-06-04 21:39:07] 2025-06-04 19:38:39,100 | INFO     | job summary report
[2025-06-04 21:39:07] 2025-06-04 19:38:39,100 | INFO     | --------------------------------------------------
[2025-06-04 21:39:07] 2025-06-04 19:38:39,101 | INFO     | PanDA job id: 6678156175
[2025-06-04 21:39:07] 2025-06-04 19:38:39,101 | INFO     | task id: 45006595
[2025-06-04 21:39:07] 2025-06-04 19:38:39,101 | INFO     | errors: (none)
[2025-06-04 21:39:07] 2025-06-04 19:38:39,101 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 21:39:07] 2025-06-04 19:38:39,101 | INFO     | pilot state: finished 
[2025-06-04 21:39:07] 2025-06-04 19:38:39,101 | INFO     | transexitcode: 0
[2025-06-04 21:39:07] 2025-06-04 19:38:39,101 | INFO     | exeerrorcode: 0
[2025-06-04 21:39:07] 2025-06-04 19:38:39,101 | INFO     | exeerrordiag: 
[2025-06-04 21:39:07] 2025-06-04 19:38:39,101 | INFO     | exitcode: 0
[2025-06-04 21:39:07] 2025-06-04 19:38:39,101 | INFO     | exitmsg: OK
[2025-06-04 21:39:07] 2025-06-04 19:38:39,102 | INFO     | cpuconsumptiontime: 52720 s
[2025-06-04 21:39:07] 2025-06-04 19:38:39,102 | INFO     | nevents: 400
[2025-06-04 21:39:07] 2025-06-04 19:38:39,102 | INFO     | neventsw: 0
[2025-06-04 21:39:07] 2025-06-04 19:38:39,102 | INFO     | pid: 30216
[2025-06-04 21:39:07] 2025-06-04 19:38:39,102 | INFO     | pgrp: 30216
[2025-06-04 21:39:07] 2025-06-04 19:38:39,102 | INFO     | corecount: 8
[2025-06-04 21:39:07] 2025-06-04 19:38:39,102 | INFO     | event service: False
[2025-06-04 21:39:07] 2025-06-04 19:38:39,102 | INFO     | sizes: {0: 2397116, 1: 2397371, 12: 2397371, 23: 2397399, 33: 2397427, 44: 2397483, 55: 2397639, 66: 2397667, 76: 2397695, 87: 2397751, 90: 2397985, 98: 2398293, 1
[2025-06-04 21:39:07] 2025-06-04 19:38:39,102 | INFO     | --------------------------------------------------
[2025-06-04 21:39:07] 2025-06-04 19:38:39,102 | INFO     | 
[2025-06-04 21:39:07] 2025-06-04 19:38:39,103 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-06-04 21:39:07] 2025-06-04 19:38:39,236 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,237 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,237 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,237 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,237 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,237 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,237 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,237 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,237 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,237 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,237 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,238 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,238 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,238 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,238 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,238 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,238 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 21:39:07] 2025-06-04 19:38:39,238 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,238 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 21:39:07] 2025-06-04 19:38:39,238 | INFO     | job 6678156175 has completed (purged errors)
[2025-06-04 21:39:07] 2025-06-04 19:38:39,239 | INFO     | overall cleanup function is called
[2025-06-04 21:39:07] 2025-06-04 19:38:40,248 | INFO     | --- collectZombieJob: --- 10, [30216]
[2025-06-04 21:39:07] 2025-06-04 19:38:40,249 | INFO     | zombie collector waiting for pid 30216
[2025-06-04 21:39:07] 2025-06-04 19:38:40,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 21:39:07] 2025-06-04 19:38:40,249 | INFO     | collected zombie processes
[2025-06-04 21:39:07] 2025-06-04 19:38:40,249 | INFO     | will attempt to kill all subprocesses of pid=30216
[2025-06-04 21:39:07] 2025-06-04 19:38:40,364 | INFO     | process IDs to be killed: [30216] (in reverse order)
[2025-06-04 21:39:07] 2025-06-04 19:38:40,445 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 21:39:07] 2025-06-04 19:38:40,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 21:39:07] 2025-06-04 19:38:40,449 | INFO     | did not find any defunct processes belonging to 30216
[2025-06-04 21:39:07] 2025-06-04 19:38:40,453 | INFO     | did not find any defunct processes belonging to 30216
[2025-06-04 21:39:07] 2025-06-04 19:38:40,453 | INFO     | ready for new job
[2025-06-04 21:39:07] 2025-06-04 19:38:40,454 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 21:39:07] 2025-06-04 19:38:40,456 | INFO     | **************************************
[2025-06-04 21:39:07] 2025-06-04 19:38:40,456 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 21:39:07] 2025-06-04 19:38:40,457 | INFO     | **************************************
[2025-06-04 21:39:07] 2025-06-04 19:38:40,457 | INFO     | 
[2025-06-04 21:39:07] 2025-06-04 19:38:40,457 | INFO     | pilot is running in a VM
[2025-06-04 21:39:07] 2025-06-04 19:38:40,458 | INFO     | architecture information:
[2025-06-04 21:39:07] 2025-06-04 19:38:40,458 | INFO     | executing command: cat /etc/os-release
[2025-06-04 21:39:07] 2025-06-04 19:38:40,524 | INFO     | cat /etc/os-release:
[2025-06-04 21:39:07] NAME="CentOS Linux"
[2025-06-04 21:39:07] VERSION="7 (Core)"
[2025-06-04 21:39:07] ID="centos"
[2025-06-04 21:39:07] ID_LIKE="rhel fedora"
[2025-06-04 21:39:07] VERSION_ID="7"
[2025-06-04 21:39:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 21:39:07] ANSI_COLOR="0;31"
[2025-06-04 21:39:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 21:39:07] HOME_URL="https://www.centos.org/"
[2025-06-04 21:39:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 21:39:07] 
[2025-06-04 21:39:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 21:39:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 21:39:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 21:39:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 21:39:07] 
[2025-06-04 21:39:07] 2025-06-04 19:38:40,524 | INFO     | **************************************
[2025-06-04 21:39:07] 2025-06-04 19:38:41,028 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-06-04 21:39:07] 2025-06-04 19:38:41,214 | INFO     | sufficient remaining disk space (497000906752 B)
[2025-06-04 21:39:07] 2025-06-04 19:38:41,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 21:39:07] 2025-06-04 19:38:41,215 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 21:39:07] 2025-06-04 19:38:41,215 | INFO     | update_server=False
[2025-06-04 21:39:07] 2025-06-04 19:38:41,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 21:39:07] 2025-06-04 19:38:41,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:39:07] 2025-06-04 19:38:41,215 | INFO     | aborting loop
[2025-06-04 21:39:07] 2025-06-04 19:38:41,217 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 21:39:07] 2025-06-04 19:38:41,223 | INFO     | all job control threads have been joined
[2025-06-04 21:39:07] 2025-06-04 19:38:41,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 21:39:07] 2025-06-04 19:38:41,417 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 21:39:07] 2025-06-04 19:38:41,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 21:39:07] 2025-06-04 19:38:41,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 21:39:07] 2025-06-04 19:38:41,577 | INFO     | all payload control threads have been joined
[2025-06-04 21:39:07] 2025-06-04 19:38:41,988 | INFO     | all data control threads have been joined
[2025-06-04 21:39:07] 2025-06-04 19:38:42,221 | INFO     | [job] retrieve thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:42,221 | INFO     | [job] job monitor thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:42,231 | INFO     | [job] control thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:42,255 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:42,375 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:42,582 | INFO     | [payload] control thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:42,994 | INFO     | [data] control thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:43,096 | INFO     | [payload] failed_post thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:43,299 | INFO     | [data] copytool_in thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:43,337 | INFO     | [data] copytool_out thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:43,388 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:43,446 | INFO     | [payload] validate_post thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:43,609 | INFO     | [job] validate thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:43,874 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 21:39:07] 2025-06-04 19:38:44,880 | INFO     | [job] queue monitor thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:45,227 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:51,524 | INFO     | job.realtimelogging is not enabled
[2025-06-04 21:39:07] 2025-06-04 19:38:52,529 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 21:39:07] 2025-06-04 19:38:53,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140062488708928)>', '<ExcThread(monitor, started 140061693699840)>']
[2025-06-04 21:39:07] 2025-06-04 19:38:53,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 21:39:07] 2025-06-04 19:38:53,491 | INFO     | [monitor] control thread has ended
[2025-06-04 21:39:07] 2025-06-04 19:38:58,269 | INFO     | all workflow threads have been joined
[2025-06-04 21:39:07] 2025-06-04 19:38:58,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 21:39:07] 2025-06-04 19:38:58,270 | INFO     | traces error code: 0
[2025-06-04 21:39:07] 2025-06-04 19:38:58,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 21:39:07] 2025-06-04 19:38:58,583 [wrapper] ==== pilot stdout END ====
[2025-06-04 21:39:07] 2025-06-04 19:38:58,598 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 21:39:07] 2025-06-04 19:38:58,607 [wrapper] pilotpid: 17662
[2025-06-04 21:39:07] 2025-06-04 19:38:58,619 [wrapper] Pilot exit status: 0
[2025-06-04 21:39:07] 2025-06-04 19:38:58,926 [wrapper] pandaids: 6678156175
[2025-06-04 21:39:07] 2025-06-04 19:38:59,357 [wrapper] cleanup supervisor_pilot 20087 17663
[2025-06-04 21:39:07] 2025-06-04 19:38:59,388 [wrapper] Test setup, not cleaning
[2025-06-04 21:39:07] 2025-06-04 19:38:59,464 [wrapper] apfmon messages muted
[2025-06-04 21:39:07] 2025-06-04 19:38:59,546 [wrapper] ==== wrapper stdout END ====
[2025-06-04 21:39:07] 2025-06-04 19:38:59,632 [wrapper] ==== wrapper stderr END ====
[2025-06-04 21:39:07]  *** Error codes and diagnostics ***
[2025-06-04 21:39:07]     "exeErrorCode": 0,
[2025-06-04 21:39:07]     "exeErrorDiag": "",
[2025-06-04 21:39:07]     "pilotErrorCode": 0,
[2025-06-04 21:39:07]     "pilotErrorDiag": "",
[2025-06-04 21:39:07]  *** Listing of results directory ***
[2025-06-04 21:39:07] total 401360
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:42 pilot3.tar.gz
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc      5111 Jun  4 01:43 queuedata.json
[2025-06-04 21:39:07] -rwx------. 1 boinc boinc     37140 Jun  4 01:43 runpilot2-wrapper.sh
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc       100 Jun  4 17:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 21:39:07] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 17:34 run_atlas
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc       105 Jun  4 17:34 job.xml
[2025-06-04 21:39:07] -rw-r--r--. 2 boinc boinc 218512154 Jun  4 17:34 EVNT.45006593._001934.pool.root.1
[2025-06-04 21:39:07] drwxrwx--x. 2 boinc boinc        68 Jun  4 17:34 shared
[2025-06-04 21:39:07] -rw-r--r--. 2 boinc boinc    508879 Jun  4 17:34 input.tar.gz
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc      6393 Jun  4 17:34 init_data.xml
[2025-06-04 21:39:07] -rw-r--r--. 2 boinc boinc     15093 Jun  4 17:34 start_atlas.sh
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc         0 Jun  4 17:34 boinc_lockfile
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc      2525 Jun  4 17:34 pandaJob.out
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc    990989 Jun  4 17:37 agis_schedconf.cvmfs.json
[2025-06-04 21:39:07] drwx------. 4 boinc boinc      4096 Jun  4 17:37 pilot3
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc 185443618 Jun  4 21:37 HITS.45006595._048162.pool.root.1
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc       531 Jun  4 21:37 boinc_task_state.xml
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc        95 Jun  4 21:38 pilot_heartbeat.json
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc      1016 Jun  4 21:38 memory_monitor_summary.json
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc   1598969 Jun  4 21:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc    376021 Jun  4 21:38 log.45006595._048162.job.log.tgz.1
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc      7691 Jun  4 21:38 heartbeat.json
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc      4489 Jun  4 21:38 pilotlog.txt
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc   1231518 Jun  4 21:38 log.45006595._048162.job.log.1
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc       357 Jun  4 21:39 output.list
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc       620 Jun  4 21:39 runtime_log
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc   1628160 Jun  4 21:39 result.tar.gz
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc      8673 Jun  4 21:39 runtime_log.err
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc       657 Jun  4 21:39 OWsKDm7Sqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoVmKDm1yEAFo.diag
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc      8192 Jun  4 21:39 boinc_mmap_file
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc        28 Jun  4 21:39 wrapper_checkpoint.txt
[2025-06-04 21:39:07] -rw-r--r--. 1 boinc boinc     20478 Jun  4 21:39 stderr.txt
[2025-06-04 21:39:07] HITS file was successfully produced:
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc 185443618 Jun  4 21:37 shared/HITS.pool.root.1
[2025-06-04 21:39:07]  *** Contents of shared directory: ***
[2025-06-04 21:39:07] total 396600
[2025-06-04 21:39:07] -rw-r--r--. 2 boinc boinc 218512154 Jun  4 17:34 ATLAS.root_0
[2025-06-04 21:39:07] -rw-r--r--. 2 boinc boinc    508879 Jun  4 17:34 input.tar.gz
[2025-06-04 21:39:07] -rw-r--r--. 2 boinc boinc     15093 Jun  4 17:34 start_atlas.sh
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc 185443618 Jun  4 21:37 HITS.pool.root.1
[2025-06-04 21:39:07] -rw-------. 1 boinc boinc   1628160 Jun  4 21:39 result.tar.gz
21:39:08 (13218): run_atlas exited; CPU time 52917.052617
21:39:08 (13218): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN