Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:38:21 (176438): wrapper (7.7.26015): starting
16:38:21 (176438): wrapper: running run_atlas (--nthreads 3)
[2025-06-04 16:38:21] Arguments: --nthreads 3
[2025-06-04 16:38:21] Threads: 3
[2025-06-04 16:38:21] Checking for CVMFS
[2025-06-04 16:38:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 16:38:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 16:38:21] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 16:38:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 16:38:21] 2.9.2.0 2927 517 68900 146782 3 55 26385416 36864000 0 130560 0 466920 99.993 84739 10723 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-04 16:38:21] CVMFS is ok
[2025-06-04 16:38:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 16:38:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 16:38:21] Further information can be found at the LHC@home message board.
[2025-06-04 16:38:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 16:38:21] Checking for apptainer binary...
[2025-06-04 16:38:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 16:38:21] Running /usr/bin/apptainer --version
[2025-06-04 16:38:21] apptainer version 1.3.6-6.1
[2025-06-04 16:38:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 16:38:21] magicA246b
[2025-06-04 16:38:21] apptainer works
[2025-06-04 16:38:21] Set ATHENA_PROC_NUMBER=3
[2025-06-04 16:38:21] Set ATHENA_CORE_NUMBER=3
[2025-06-04 16:38:21] Starting ATLAS job with PandaID=6678213796
[2025-06-04 16:38:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 17:52:58]  *** The last 200 lines of the pilot log: ***
[2025-06-04 17:52:58]  filesize=216760
[2025-06-04 17:52:58]  filetype=log
[2025-06-04 17:52:58]  guid=c8d9b10f-10ea-4226-9186-e5d815857ad8
[2025-06-04 17:52:58]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-04 17:52:58]  is_altstaged=None
[2025-06-04 17:52:58]  is_tar=False
[2025-06-04 17:52:58]  lfn=log.45006595._048636.job.log.tgz.1
[2025-06-04 17:52:58]  mtime=0
[2025-06-04 17:52:58]  protocol_id=None
[2025-06-04 17:52:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 17:52:58]  replicas=None
[2025-06-04 17:52:58]  scope=mc23_13p6TeV
[2025-06-04 17:52:58]  status=None
[2025-06-04 17:52:58]  status_code=0
[2025-06-04 17:52:58]  storage_token=
[2025-06-04 17:52:58]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6678213796/log.45006595._048636.job.log.tgz.1
[2025-06-04 17:52:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/22/log.45006595._048636.job.log.tgz.1
[2025-06-04 17:52:58]  workdir=None
[2025-06-04 17:52:58] ]
[2025-06-04 17:52:58] 2025-06-04 15:52:33,824 | INFO     | transferring file log.45006595._048636.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6678213796/log.45006595._048636.job.log.tgz.1 to /local/data/boinc/
[2025-06-04 17:52:58] 2025-06-04 15:52:33,824 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6678213796/log.45006595._048636.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0486
[2025-06-04 17:52:58] 2025-06-04 15:52:33,838 | INFO     | adding to output.list: log.45006595._048636.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/22/log.45006595._048636.job.log.tg
[2025-06-04 17:52:58] 2025-06-04 15:52:33,838 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 17:52:58] 2025-06-04 15:52:33,838 | INFO     | summary of transferred files:
[2025-06-04 17:52:58] 2025-06-04 15:52:33,838 | INFO     |  -- lfn=log.45006595._048636.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 17:52:58] 2025-06-04 15:52:33,838 | INFO     | stage-out finished correctly
[2025-06-04 17:52:58] 2025-06-04 15:52:33,935 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 17:52:58] 2025-06-04 15:52:35,593 | INFO     | job 6678213796 has state=finished
[2025-06-04 17:52:58] 2025-06-04 15:52:35,593 | INFO     | preparing for final server update for job 6678213796 in state='finished'
[2025-06-04 17:52:58] 2025-06-04 15:52:35,593 | INFO     | this job has now completed (state=finished)
[2025-06-04 17:52:58] 2025-06-04 15:52:35,593 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 17:52:58] 2025-06-04 15:52:35,594 | INFO     | log transfer has been attempted: DONE
[2025-06-04 17:52:58] 2025-06-04 15:52:35,594 | INFO     | job 6678213796 has finished - writing final server update
[2025-06-04 17:52:58] 2025-06-04 15:52:35,594 | INFO     | total number of processed events: 400 (read)
[2025-06-04 17:52:58] 2025-06-04 15:52:35,595 | INFO     | executing command: lscpu
[2025-06-04 17:52:58] 2025-06-04 15:52:35,611 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 17:52:58] 2025-06-04 15:52:37,768 | WARNING  | process 186572 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 17:52:58] 2025-06-04 15:52:37,768 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678213796/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:52:58] 2025-06-04 15:52:37,819 | INFO     | number of running child processes to parent process 186572: 1
[2025-06-04 17:52:58] 2025-06-04 15:52:37,819 | INFO     | maximum number of monitored processes: 6
[2025-06-04 17:52:58] 2025-06-04 15:52:39,189 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 17:52:58] 2025-06-04 15:52:39,189 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6678213796/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 17:52:58] 2025-06-04 15:52:39,189 | INFO     | extracted standard info from prmon json
[2025-06-04 17:52:58] 2025-06-04 15:52:39,189 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 17:52:58] 2025-06-04 15:52:39,189 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 17:52:58] 2025-06-04 15:52:39,190 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 17:52:58] 2025-06-04 15:52:39,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 17:52:58] 2025-06-04 15:52:39,190 | INFO     | fitting pss+swap vs Time
[2025-06-04 17:52:58] 2025-06-04 15:52:39,190 | INFO     | sum of square deviations: 89127252.5
[2025-06-04 17:52:58] 2025-06-04 15:52:39,190 | INFO     | sum of deviations: -4656241508.0
[2025-06-04 17:52:58] 2025-06-04 15:52:39,190 | INFO     | mean x: 1749050215.5
[2025-06-04 17:52:58] 2025-06-04 15:52:39,190 | INFO     | mean y: 2382211.3333333335
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | -- intersect: 91377354338.82536
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | intersect: 91377354338.82536
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | chi2: 0.10784421144064794
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | -- intersect: 91377354338.82536
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | current memory leak: -52.24 B/s (using 66 data points, chi2=0.11)
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | ..............................
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | . Timing measurements:
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | . get job = 0 s
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | . initial setup = 1 s
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | . payload setup = 3 s
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | . stage-in = 0 s
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | . payload execution = 4426 s
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | . stage-out = 0 s
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | . log creation = 0 s
[2025-06-04 17:52:58] 2025-06-04 15:52:39,191 | INFO     | ..............................
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | 
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | job summary report
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | --------------------------------------------------
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | PanDA job id: 6678213796
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | task id: 45006595
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | errors: (none)
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | pilot state: finished 
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | transexitcode: 0
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | exeerrorcode: 0
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | exeerrordiag: 
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | exitcode: 0
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | exitmsg: OK
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | cpuconsumptiontime: 12675 s
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | nevents: 400
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | neventsw: 0
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | pid: 186572
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | pgrp: 186572
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | corecount: 3
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | event service: False
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | sizes: {0: 2397174, 1: 2397373, 3: 2397579, 11: 2397607, 4432: 2423741, 4433: 2432872, 4438: 2432986}
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | --------------------------------------------------
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | 
[2025-06-04 17:52:58] 2025-06-04 15:52:39,223 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-04 17:52:58] 2025-06-04 15:52:39,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | job 6678213796 has completed (purged errors)
[2025-06-04 17:52:58] 2025-06-04 15:52:39,236 | INFO     | overall cleanup function is called
[2025-06-04 17:52:58] 2025-06-04 15:52:40,243 | INFO     | --- collectZombieJob: --- 10, [186572]
[2025-06-04 17:52:58] 2025-06-04 15:52:40,243 | INFO     | zombie collector waiting for pid 186572
[2025-06-04 17:52:58] 2025-06-04 15:52:40,243 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 17:52:58] 2025-06-04 15:52:40,243 | INFO     | collected zombie processes
[2025-06-04 17:52:58] 2025-06-04 15:52:40,243 | INFO     | will attempt to kill all subprocesses of pid=186572
[2025-06-04 17:52:58] 2025-06-04 15:52:40,284 | INFO     | process IDs to be killed: [186572] (in reverse order)
[2025-06-04 17:52:58] 2025-06-04 15:52:40,308 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 17:52:58] 2025-06-04 15:52:40,309 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 17:52:58] 2025-06-04 15:52:40,310 | INFO     | did not find any defunct processes belonging to 186572
[2025-06-04 17:52:58] 2025-06-04 15:52:40,311 | INFO     | did not find any defunct processes belonging to 186572
[2025-06-04 17:52:58] 2025-06-04 15:52:40,311 | INFO     | ready for new job
[2025-06-04 17:52:58] 2025-06-04 15:52:40,311 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 17:52:58] 2025-06-04 15:52:40,311 | INFO     | **************************************
[2025-06-04 17:52:58] 2025-06-04 15:52:40,311 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 17:52:58] 2025-06-04 15:52:40,311 | INFO     | **************************************
[2025-06-04 17:52:58] 2025-06-04 15:52:40,311 | INFO     | 
[2025-06-04 17:52:58] 2025-06-04 15:52:40,312 | INFO     | architecture information:
[2025-06-04 17:52:58] 2025-06-04 15:52:40,312 | INFO     | executing command: cat /etc/os-release
[2025-06-04 17:52:58] 2025-06-04 15:52:40,321 | INFO     | cat /etc/os-release:
[2025-06-04 17:52:58] NAME="CentOS Linux"
[2025-06-04 17:52:58] VERSION="7 (Core)"
[2025-06-04 17:52:58] ID="centos"
[2025-06-04 17:52:58] ID_LIKE="rhel fedora"
[2025-06-04 17:52:58] VERSION_ID="7"
[2025-06-04 17:52:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 17:52:58] ANSI_COLOR="0;31"
[2025-06-04 17:52:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 17:52:58] HOME_URL="https://www.centos.org/"
[2025-06-04 17:52:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 17:52:58] 
[2025-06-04 17:52:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 17:52:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 17:52:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 17:52:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 17:52:58] 
[2025-06-04 17:52:58] 2025-06-04 15:52:40,321 | INFO     | **************************************
[2025-06-04 17:52:58] 2025-06-04 15:52:40,824 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-04 17:52:58] 2025-06-04 15:52:40,838 | INFO     | sufficient remaining disk space (374108848128 B)
[2025-06-04 17:52:58] 2025-06-04 15:52:40,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 17:52:58] 2025-06-04 15:52:40,838 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 17:52:58] 2025-06-04 15:52:40,838 | INFO     | update_server=False
[2025-06-04 17:52:58] 2025-06-04 15:52:40,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 17:52:58] 2025-06-04 15:52:40,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 17:52:58] 2025-06-04 15:52:40,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:52:58] 2025-06-04 15:52:41,163 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 17:52:58] 2025-06-04 15:52:41,163 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 17:52:58] 2025-06-04 15:52:41,163 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 17:52:58] 2025-06-04 15:52:41,328 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 17:52:58] 2025-06-04 15:52:41,328 | INFO     | aborting loop
[2025-06-04 17:52:58] 2025-06-04 15:52:41,404 | INFO     | all payload control threads have been joined
[2025-06-04 17:52:58] 2025-06-04 15:52:41,535 | INFO     | all data control threads have been joined
[2025-06-04 17:52:58] 2025-06-04 15:52:41,840 | INFO     | [job] retrieve thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:41,844 | INFO     | [job] queue monitor thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:41,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 17:52:58] 2025-06-04 15:52:42,053 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:42,131 | INFO     | [data] copytool_in thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:42,331 | INFO     | [job] job monitor thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:42,343 | INFO     | all job control threads have been joined
[2025-06-04 17:52:58] 2025-06-04 15:52:42,345 | INFO     | [job] validate thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:42,410 | INFO     | [payload] control thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:42,478 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:42,478 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:42,540 | INFO     | [data] control thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:42,582 | INFO     | [payload] validate_post thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:43,166 | INFO     | [payload] failed_post thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:43,345 | INFO     | [job] control thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:43,883 | INFO     | [data] copytool_out thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:44,845 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:51,446 | INFO     | job.realtimelogging is not enabled
[2025-06-04 17:52:58] 2025-06-04 15:52:52,452 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 17:52:58] 2025-06-04 15:52:53,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047967450944)>', '<ExcThread(monitor, started 140047686797056)>']
[2025-06-04 17:52:58] 2025-06-04 15:52:53,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 17:52:58] 2025-06-04 15:52:53,228 | INFO     | [monitor] control thread has ended
[2025-06-04 17:52:58] 2025-06-04 15:52:58,238 | INFO     | all workflow threads have been joined
[2025-06-04 17:52:58] 2025-06-04 15:52:58,239 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 17:52:58] 2025-06-04 15:52:58,239 | INFO     | traces error code: 0
[2025-06-04 17:52:58] 2025-06-04 15:52:58,239 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 17:52:58] 2025-06-04 15:52:58,289 [wrapper] ==== pilot stdout END ====
[2025-06-04 17:52:58] 2025-06-04 15:52:58,292 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 17:52:58] 2025-06-04 15:52:58,295 [wrapper] pilotpid: 180071
[2025-06-04 17:52:58] 2025-06-04 15:52:58,297 [wrapper] Pilot exit status: 0
[2025-06-04 17:52:58] 2025-06-04 15:52:58,305 [wrapper] pandaids: 6678213796
[2025-06-04 17:52:58] 2025-06-04 15:52:58,321 [wrapper] cleanup supervisor_pilot  196001 180072
[2025-06-04 17:52:58] 2025-06-04 15:52:58,324 [wrapper] Test setup, not cleaning
[2025-06-04 17:52:58] 2025-06-04 15:52:58,327 [wrapper] apfmon messages muted
[2025-06-04 17:52:58] 2025-06-04 15:52:58,329 [wrapper] ==== wrapper stdout END ====
[2025-06-04 17:52:58] 2025-06-04 15:52:58,331 [wrapper] ==== wrapper stderr END ====
[2025-06-04 17:52:58]  *** Error codes and diagnostics ***
[2025-06-04 17:52:58]     "exeErrorCode": 0,
[2025-06-04 17:52:58]     "exeErrorDiag": "",
[2025-06-04 17:52:58]     "pilotErrorCode": 0,
[2025-06-04 17:52:58]     "pilotErrorDiag": "",
[2025-06-04 17:52:58]  *** Listing of results directory ***
[2025-06-04 17:52:58] total 392580
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:53 pilot3.tar.gz
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:54 queuedata.json
[2025-06-04 17:52:58] -rwx------ 1 boinc boinc     37140 Jun  4 01:55 runpilot2-wrapper.sh
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc       100 Jun  4 16:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 17:52:58] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 16:38 run_atlas
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc       105 Jun  4 16:38 job.xml
[2025-06-04 17:52:58] -rw-r--r-- 2 boinc boinc 214868394 Jun  4 16:38 EVNT.45006593._001951.pool.root.1
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc      6932 Jun  4 16:38 init_data.xml
[2025-06-04 17:52:58] drwxrwx--x 2 boinc boinc      4096 Jun  4 16:38 shared
[2025-06-04 17:52:58] -rw-r--r-- 2 boinc boinc    508887 Jun  4 16:38 input.tar.gz
[2025-06-04 17:52:58] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:38 start_atlas.sh
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc         0 Jun  4 16:38 boinc_lockfile
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc      2525 Jun  4 16:38 pandaJob.out
[2025-06-04 17:52:58] -rw------- 1 boinc boinc    986819 Jun  4 16:38 agis_schedconf.cvmfs.json
[2025-06-04 17:52:58] -rw------- 1 boinc boinc   1598969 Jun  4 16:38 agis_ddmendpoints.agis.ALL.json
[2025-06-04 17:52:58] drwx------ 4 boinc boinc      4096 Jun  4 16:38 pilot3
[2025-06-04 17:52:58] -rw------- 1 boinc boinc        95 Jun  4 17:51 pilot_heartbeat.json
[2025-06-04 17:52:58] -rw------- 1 boinc boinc 181990164 Jun  4 17:52 HITS.45006595._048636.pool.root.1
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc       529 Jun  4 17:52 boinc_task_state.xml
[2025-06-04 17:52:58] -rw------- 1 boinc boinc      1012 Jun  4 17:52 memory_monitor_summary.json
[2025-06-04 17:52:58] -rw------- 1 boinc boinc    216760 Jun  4 17:52 log.45006595._048636.job.log.tgz.1
[2025-06-04 17:52:58] -rw------- 1 boinc boinc      7646 Jun  4 17:52 heartbeat.json
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc      8192 Jun  4 17:52 boinc_mmap_file
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc        27 Jun  4 17:52 wrapper_checkpoint.txt
[2025-06-04 17:52:58] -rw------- 1 boinc boinc      4429 Jun  4 17:52 pilotlog.txt
[2025-06-04 17:52:58] -rw------- 1 boinc boinc    436340 Jun  4 17:52 log.45006595._048636.job.log.1
[2025-06-04 17:52:58] -rw------- 1 boinc boinc       357 Jun  4 17:52 output.list
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc       620 Jun  4 17:52 runtime_log
[2025-06-04 17:52:58] -rw------- 1 boinc boinc    675840 Jun  4 17:52 result.tar.gz
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc      8753 Jun  4 17:52 runtime_log.err
[2025-06-04 17:52:58] -rw------- 1 boinc boinc       662 Jun  4 17:52 7TBNDmMeqg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmuKaKDmdARbQn.diag
[2025-06-04 17:52:58] -rw-r--r-- 1 boinc boinc     21069 Jun  4 17:52 stderr.txt
[2025-06-04 17:52:58] HITS file was successfully produced:
[2025-06-04 17:52:58] -rw------- 1 boinc boinc 181990164 Jun  4 17:52 shared/HITS.pool.root.1
[2025-06-04 17:52:58]  *** Contents of shared directory: ***
[2025-06-04 17:52:58] total 388748
[2025-06-04 17:52:58] -rw-r--r-- 2 boinc boinc 214868394 Jun  4 16:38 ATLAS.root_0
[2025-06-04 17:52:58] -rw-r--r-- 2 boinc boinc    508887 Jun  4 16:38 input.tar.gz
[2025-06-04 17:52:58] -rw-r--r-- 2 boinc boinc     15093 Jun  4 16:38 start_atlas.sh
[2025-06-04 17:52:58] -rw------- 1 boinc boinc 181990164 Jun  4 17:52 HITS.pool.root.1
[2025-06-04 17:52:58] -rw------- 1 boinc boinc    675840 Jun  4 17:52 result.tar.gz
17:53:00 (176438): run_atlas exited; CPU time 12686.655349
17:53:00 (176438): called boinc_finish(0)

</stderr_txt>
]]>

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