Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:46:33 (25065): wrapper (7.7.26015): starting
14:46:33 (25065): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 14:46:33] Arguments: --nthreads 8
[2025-06-04 14:46:33] Threads: 8
[2025-06-04 14:46:33] Checking for CVMFS
[2025-06-04 14:46:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:46:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:46:35] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:46:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:46:36] 2.11.2.0 25379 33338 99344 146780 1 59 19072292 25165825 3908 130560 0 17475715 99.850 18476131 2606 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 14:46:36] CVMFS is ok
[2025-06-04 14:46:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:46:36] Checking for apptainer binary...
[2025-06-04 14:46:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:46:36] Running /usr/bin/apptainer --version
[2025-06-04 14:46:37] apptainer version 1.3.2-1.el7
[2025-06-04 14:46:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:46:44] cg-vwn336.simple-grid.lan
[2025-06-04 14:46:44] apptainer works
[2025-06-04 14:46:44] Set ATHENA_PROC_NUMBER=8
[2025-06-04 14:46:44] Set ATHENA_CORE_NUMBER=8
[2025-06-04 14:46:45] Starting ATLAS job with PandaID=6678212665
[2025-06-04 14:46:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:53:05]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:53:05] 2025-06-04 16:45:10,300 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:53:05] 2025-06-04 16:45:10,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:53:05] 2025-06-04 16:45:10,300 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:53:05] 2025-06-04 16:45:10,300 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:53:05] 2025-06-04 16:45:10,305 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:53:05] 2025-06-04 16:45:10,306 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 18:53:05] 2025-06-04 16:45:10,308 | INFO     | sum of deviations: 80530482270.5
[2025-06-04 18:53:05] 2025-06-04 16:45:10,308 | INFO     | mean x: 1749048619.5
[2025-06-04 18:53:05] 2025-06-04 16:45:10,308 | INFO     | mean y: 2419205.346846847
[2025-06-04 18:53:05] 2025-06-04 16:45:10,308 | INFO     | -- intersect: -41515315246.332214
[2025-06-04 18:53:05] 2025-06-04 16:45:10,308 | INFO     | intersect: -41515315246.332214
[2025-06-04 18:53:05] 2025-06-04 16:45:10,309 | INFO     | chi2: 7.320011053146233
[2025-06-04 18:53:05] 2025-06-04 16:45:10,309 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 18:53:05] 2025-06-04 16:45:10,311 | INFO     | sum of deviations: 93160412009.00002
[2025-06-04 18:53:05] 2025-06-04 16:45:10,311 | INFO     | mean x: 1749048467.0
[2025-06-04 18:53:05] 2025-06-04 16:45:10,311 | INFO     | mean y: 2427617.465437788
[2025-06-04 18:53:05] 2025-06-04 16:45:10,311 | INFO     | -- intersect: -51423820654.86467
[2025-06-04 18:53:05] 2025-06-04 16:45:10,311 | INFO     | intersect: -51423820654.86467
[2025-06-04 18:53:05] 2025-06-04 16:45:10,312 | INFO     | chi2: 6.617184528986972
[2025-06-04 18:53:05] 2025-06-04 16:45:10,312 | INFO     | current chi2=6.617184528986972 (change=9.601440749972326 %)
[2025-06-04 18:53:05] 2025-06-04 16:45:10,312 | INFO     | right removable region: 216
[2025-06-04 18:53:05] 2025-06-04 16:45:10,312 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 18:53:05] 2025-06-04 16:45:10,314 | INFO     | sum of deviations: 4129161674.999996
[2025-06-04 18:53:05] 2025-06-04 16:45:10,314 | INFO     | mean x: 1749048772.0
[2025-06-04 18:53:05] 2025-06-04 16:45:10,314 | INFO     | mean y: 2471153.456221198
[2025-06-04 18:53:05] 2025-06-04 16:45:10,314 | INFO     | -- intersect: -2276901875.334802
[2025-06-04 18:53:05] 2025-06-04 16:45:10,314 | INFO     | intersect: -2276901875.334802
[2025-06-04 18:53:05] 2025-06-04 16:45:10,315 | INFO     | chi2: 2.4032077002013903
[2025-06-04 18:53:05] 2025-06-04 16:45:10,315 | INFO     | current chi2=2.4032077002013903 (change=67.16934328714626 %)
[2025-06-04 18:53:05] 2025-06-04 16:45:10,315 | INFO     | sum of square deviations: 2954447953.0
[2025-06-04 18:53:05] 2025-06-04 16:45:10,317 | INFO     | sum of deviations: -34071181255.000008
[2025-06-04 18:53:05] 2025-06-04 16:45:10,317 | INFO     | mean x: 1749048924.5
[2025-06-04 18:53:05] 2025-06-04 16:45:10,317 | INFO     | mean y: 2498197.113207547
[2025-06-04 18:53:05] 2025-06-04 16:45:10,317 | INFO     | -- intersect: 20172818973.957954
[2025-06-04 18:53:05] 2025-06-04 16:45:10,318 | INFO     | intersect: 20172818973.957954
[2025-06-04 18:53:05] 2025-06-04 16:45:10,318 | INFO     | chi2: 0.9462111660374528
[2025-06-04 18:53:05] 2025-06-04 16:45:10,318 | INFO     | current chi2=0.9462111660374528 (change=60.62715819535034 %)
[2025-06-04 18:53:05] 2025-06-04 16:45:10,319 | INFO     | sum of square deviations: 2750295288.0
[2025-06-04 18:53:05] 2025-06-04 16:45:10,320 | INFO     | sum of deviations: -32304193767.0
[2025-06-04 18:53:05] 2025-06-04 16:45:10,320 | INFO     | mean x: 1749049077.0
[2025-06-04 18:53:05] 2025-06-04 16:45:10,320 | INFO     | mean y: 2496824.198067633
[2025-06-04 18:53:05] 2025-06-04 16:45:10,321 | INFO     | -- intersect: 20546334621.51625
[2025-06-04 18:53:05] 2025-06-04 16:45:10,321 | INFO     | intersect: 20546334621.51625
[2025-06-04 18:53:05] 2025-06-04 16:45:10,321 | INFO     | chi2: 0.9218058114809429
[2025-06-04 18:53:05] 2025-06-04 16:45:10,321 | INFO     | current chi2=0.9218058114809429 (change=2.5792714599548416 %)
[2025-06-04 18:53:05] 2025-06-04 16:45:10,321 | INFO     | left removable region: 30
[2025-06-04 18:53:05] 2025-06-04 16:45:10,321 | INFO     | sum of square deviations: 1995283922.5
[2025-06-04 18:53:05] 2025-06-04 16:45:10,323 | INFO     | sum of deviations: 4045454790.9999995
[2025-06-04 18:53:05] 2025-06-04 16:45:10,323 | INFO     | mean x: 1749049351.5
[2025-06-04 18:53:05] 2025-06-04 16:45:10,323 | INFO     | mean y: 2488466.9032258065
[2025-06-04 18:53:05] 2025-06-04 16:45:10,323 | INFO     | -- intersect: -3543723678.1109967
[2025-06-04 18:53:05] 2025-06-04 16:45:10,323 | INFO     | intersect: -3543723678.1109967
[2025-06-04 18:53:05] 2025-06-04 16:45:10,323 | INFO     | chi2: 0.00044907235121328053
[2025-06-04 18:53:05] 2025-06-04 16:45:10,324 | INFO     | -- intersect: -3543723678.1109967
[2025-06-04 18:53:05] 2025-06-04 16:45:10,324 | INFO     | current memory leak: 2.03 B/s (using 186 data points, chi2=0.00)
[2025-06-04 18:53:05] 2025-06-04 16:45:10,325 | INFO     | ..............................
[2025-06-04 18:53:05] 2025-06-04 16:45:10,325 | INFO     | . Timing measurements:
[2025-06-04 18:53:05] 2025-06-04 16:45:10,325 | INFO     | . get job = 0 s
[2025-06-04 18:53:05] 2025-06-04 16:45:10,325 | INFO     | . initial setup = 11 s
[2025-06-04 18:53:05] 2025-06-04 16:45:10,325 | INFO     | . payload setup = 161 s
[2025-06-04 18:53:05] 2025-06-04 16:45:10,325 | INFO     | . stage-in = 0 s
[2025-06-04 18:53:05] 2025-06-04 16:45:10,325 | INFO     | . payload execution = 13683 s
[2025-06-04 18:53:05] 2025-06-04 16:45:10,325 | INFO     | . stage-out = 3 s
[2025-06-04 18:53:05] 2025-06-04 16:45:10,325 | INFO     | . log creation = 1 s
[2025-06-04 18:53:05] 2025-06-04 16:45:10,326 | INFO     | ..............................
[2025-06-04 18:53:05] 2025-06-04 16:45:10,782 | INFO     | 
[2025-06-04 18:53:05] 2025-06-04 16:45:10,782 | INFO     | job summary report
[2025-06-04 18:53:05] 2025-06-04 16:45:10,782 | INFO     | --------------------------------------------------
[2025-06-04 18:53:05] 2025-06-04 16:45:10,782 | INFO     | PanDA job id: 6678212665
[2025-06-04 18:53:05] 2025-06-04 16:45:10,782 | INFO     | task id: 45006595
[2025-06-04 18:53:05] 2025-06-04 16:45:10,783 | INFO     | errors: (none)
[2025-06-04 18:53:05] 2025-06-04 16:45:10,783 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:53:05] 2025-06-04 16:45:10,783 | INFO     | pilot state: finished 
[2025-06-04 18:53:05] 2025-06-04 16:45:10,783 | INFO     | transexitcode: 0
[2025-06-04 18:53:05] 2025-06-04 16:45:10,783 | INFO     | exeerrorcode: 0
[2025-06-04 18:53:05] 2025-06-04 16:45:10,783 | INFO     | exeerrordiag: 
[2025-06-04 18:53:05] 2025-06-04 16:45:10,783 | INFO     | exitcode: 0
[2025-06-04 18:53:05] 2025-06-04 16:45:10,783 | INFO     | exitmsg: OK
[2025-06-04 18:53:05] 2025-06-04 16:45:10,783 | INFO     | cpuconsumptiontime: 51162 s
[2025-06-04 18:53:05] 2025-06-04 16:45:10,784 | INFO     | nevents: 400
[2025-06-04 18:53:05] 2025-06-04 16:45:10,784 | INFO     | neventsw: 0
[2025-06-04 18:53:05] 2025-06-04 16:45:10,784 | INFO     | pid: 10978
[2025-06-04 18:53:05] 2025-06-04 16:45:10,784 | INFO     | pgrp: 10978
[2025-06-04 18:53:05] 2025-06-04 16:45:10,784 | INFO     | corecount: 8
[2025-06-04 18:53:05] 2025-06-04 16:45:10,784 | INFO     | event service: False
[2025-06-04 18:53:05] 2025-06-04 16:45:10,784 | INFO     | sizes: {0: 2397115, 1: 2397370, 2: 2397370, 12: 2397398, 23: 2397426, 34: 2397454, 44: 2397610, 55: 2397638, 66: 2397666, 77: 2397694, 83: 2397956, 87: 2398292, 13
[2025-06-04 18:53:05] 2025-06-04 16:45:10,784 | INFO     | --------------------------------------------------
[2025-06-04 18:53:05] 2025-06-04 16:45:10,784 | INFO     | 
[2025-06-04 18:53:05] 2025-06-04 16:45:10,785 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-04 18:53:05] 2025-06-04 16:45:11,292 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,293 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,293 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,293 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,295 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,295 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:53:05] 2025-06-04 16:45:11,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,295 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:53:05] 2025-06-04 16:45:11,295 | INFO     | job 6678212665 has completed (purged errors)
[2025-06-04 18:53:05] 2025-06-04 16:45:11,295 | INFO     | overall cleanup function is called
[2025-06-04 18:53:05] 2025-06-04 16:45:12,143 | INFO     | PID=32766 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 18:53:05] 2025-06-04 16:45:12,143 | INFO     | .. there are 9 such processes running
[2025-06-04 18:53:05] 2025-06-04 16:45:12,305 | INFO     | --- collectZombieJob: --- 10, [10978]
[2025-06-04 18:53:05] 2025-06-04 16:45:12,305 | INFO     | zombie collector waiting for pid 10978
[2025-06-04 18:53:05] 2025-06-04 16:45:12,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:53:05] 2025-06-04 16:45:12,305 | INFO     | collected zombie processes
[2025-06-04 18:53:05] 2025-06-04 16:45:12,306 | INFO     | will attempt to kill all subprocesses of pid=10978
[2025-06-04 18:53:05] 2025-06-04 16:45:12,415 | INFO     | process IDs to be killed: [10978] (in reverse order)
[2025-06-04 18:53:05] 2025-06-04 16:45:13,197 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:53:05] 2025-06-04 16:45:13,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:53:05] 2025-06-04 16:45:13,200 | INFO     | did not find any defunct processes belonging to 10978
[2025-06-04 18:53:05] 2025-06-04 16:45:13,204 | INFO     | did not find any defunct processes belonging to 10978
[2025-06-04 18:53:05] 2025-06-04 16:45:13,204 | INFO     | ready for new job
[2025-06-04 18:53:05] 2025-06-04 16:45:13,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:53:05] 2025-06-04 16:45:13,206 | INFO     | **************************************
[2025-06-04 18:53:05] 2025-06-04 16:45:13,207 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:53:05] 2025-06-04 16:45:13,207 | INFO     | **************************************
[2025-06-04 18:53:05] 2025-06-04 16:45:13,207 | INFO     | 
[2025-06-04 18:53:05] 2025-06-04 16:45:13,207 | INFO     | pilot is running in a VM
[2025-06-04 18:53:05] 2025-06-04 16:45:13,207 | INFO     | architecture information:
[2025-06-04 18:53:05] 2025-06-04 16:45:13,209 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:53:05] 2025-06-04 16:45:13,400 | INFO     | cat /etc/os-release:
[2025-06-04 18:53:05] NAME="CentOS Linux"
[2025-06-04 18:53:05] VERSION="7 (Core)"
[2025-06-04 18:53:05] ID="centos"
[2025-06-04 18:53:05] ID_LIKE="rhel fedora"
[2025-06-04 18:53:05] VERSION_ID="7"
[2025-06-04 18:53:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:53:05] ANSI_COLOR="0;31"
[2025-06-04 18:53:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:53:05] HOME_URL="https://www.centos.org/"
[2025-06-04 18:53:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:53:05] 
[2025-06-04 18:53:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:53:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:53:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:53:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:53:05] 
[2025-06-04 18:53:05] 2025-06-04 16:45:13,400 | INFO     | **************************************
[2025-06-04 18:53:05] 2025-06-04 16:45:13,904 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-04 18:53:05] 2025-06-04 16:45:14,086 | INFO     | sufficient remaining disk space (496522756096 B)
[2025-06-04 18:53:05] 2025-06-04 16:45:14,086 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:53:05] 2025-06-04 16:45:14,086 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:53:05] 2025-06-04 16:45:14,087 | INFO     | update_server=False
[2025-06-04 18:53:05] 2025-06-04 16:45:14,087 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:53:05] 2025-06-04 16:45:14,088 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:53:05] 2025-06-04 16:45:14,152 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:53:05] 2025-06-04 16:45:14,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:53:05] 2025-06-04 16:45:14,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:53:05] 2025-06-04 16:45:14,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:53:05] 2025-06-04 16:45:14,374 | INFO     | aborting loop
[2025-06-04 18:53:05] 2025-06-04 16:45:14,798 | INFO     | all data control threads have been joined
[2025-06-04 18:53:05] 2025-06-04 16:45:14,908 | INFO     | all job control threads have been joined
[2025-06-04 18:53:05] 2025-06-04 16:45:15,093 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:15,135 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:15,314 | INFO     | [job] validate thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:15,367 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:15,380 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:15,446 | INFO     | all payload control threads have been joined
[2025-06-04 18:53:05] 2025-06-04 16:45:15,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:53:05] 2025-06-04 16:45:15,611 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:15,693 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:15,804 | INFO     | [data] control thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:15,882 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:15,900 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:15,914 | INFO     | [job] control thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:16,095 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:16,446 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:16,453 | INFO     | [payload] control thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:16,476 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:16,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:53:05] 2025-06-04 16:45:20,795 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:53:05] 2025-06-04 16:45:22,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139894216464192)>', '<ExcThread(monitor, started 139893762144000)>']
[2025-06-04 18:53:05] 2025-06-04 16:45:23,206 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:53:05] 2025-06-04 16:45:23,206 | INFO     | [monitor] control thread has ended
[2025-06-04 18:53:05] 2025-06-04 16:45:27,544 | INFO     | all workflow threads have been joined
[2025-06-04 18:53:05] 2025-06-04 16:45:27,544 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:53:05] 2025-06-04 16:45:27,544 | INFO     | traces error code: 0
[2025-06-04 18:53:05] 2025-06-04 16:45:27,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:53:05] 2025-06-04 16:45:27,823 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:53:05] 2025-06-04 16:45:27,863 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:53:05] 2025-06-04 16:45:27,925 [wrapper] pilotpid: 32766
[2025-06-04 18:53:05] 2025-06-04 16:45:28,040 [wrapper] Pilot exit status: 0
[2025-06-04 18:53:05] 2025-06-04 16:45:28,396 [wrapper] pandaids: 6678212665
[2025-06-04 18:53:05] 2025-06-04 16:45:29,288 [wrapper] cleanup supervisor_pilot 19839 32767
[2025-06-04 18:53:05] 2025-06-04 16:45:29,343 [wrapper] Test setup, not cleaning
[2025-06-04 18:53:05] 2025-06-04 16:45:29,452 [wrapper] apfmon messages muted
[2025-06-04 18:53:05] 2025-06-04 16:45:29,531 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:53:05] 2025-06-04 16:45:29,639 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:53:05]  *** Error codes and diagnostics ***
[2025-06-04 18:53:05]     "exeErrorCode": 0,
[2025-06-04 18:53:05]     "exeErrorDiag": "",
[2025-06-04 18:53:05]     "pilotErrorCode": 0,
[2025-06-04 18:53:05]     "pilotErrorDiag": "",
[2025-06-04 18:53:05]  *** Listing of results directory ***
[2025-06-04 18:53:05] total 392516
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:42 pilot3.tar.gz
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc      5111 Jun  4 01:46 queuedata.json
[2025-06-04 18:53:05] -rwx------. 1 boinc boinc     37140 Jun  4 01:47 runpilot2-wrapper.sh
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc       100 Jun  4 14:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:53:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 14:46 run_atlas
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc       105 Jun  4 14:46 job.xml
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc      6391 Jun  4 14:46 init_data.xml
[2025-06-04 18:53:05] -rw-r--r--. 2 boinc boinc 215047511 Jun  4 14:46 EVNT.45006593._001946.pool.root.1
[2025-06-04 18:53:05] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:46 start_atlas.sh
[2025-06-04 18:53:05] drwxrwx--x. 2 boinc boinc        68 Jun  4 14:46 shared
[2025-06-04 18:53:05] -rw-r--r--. 2 boinc boinc    508887 Jun  4 14:46 input.tar.gz
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc         0 Jun  4 14:46 boinc_lockfile
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc      2525 Jun  4 14:46 pandaJob.out
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc    986811 Jun  4 14:49 agis_schedconf.cvmfs.json
[2025-06-04 18:53:05] drwx------. 4 boinc boinc      4096 Jun  4 14:49 pilot3
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc 179895517 Jun  4 18:42 HITS.45006595._048524.pool.root.1
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc       531 Jun  4 18:42 boinc_task_state.xml
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc      1014 Jun  4 18:43 memory_monitor_summary.json
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc   1598969 Jun  4 18:43 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc    392314 Jun  4 18:43 log.45006595._048524.job.log.tgz.1
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc      7688 Jun  4 18:45 heartbeat.json
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc        95 Jun  4 18:45 pilot_heartbeat.json
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc      4416 Jun  4 18:45 pilotlog.txt
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc   1199235 Jun  4 18:45 log.45006595._048524.job.log.1
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc       357 Jun  4 18:45 output.list
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc       620 Jun  4 18:45 runtime_log
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc   1607680 Jun  4 18:45 result.tar.gz
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc       656 Jun  4 18:45 xXgMDmMXqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkXmKDmH8Orfm.diag
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc      8659 Jun  4 18:45 runtime_log.err
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc      8192 Jun  4 18:53 boinc_mmap_file
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc        28 Jun  4 18:53 wrapper_checkpoint.txt
[2025-06-04 18:53:05] -rw-r--r--. 1 boinc boinc     20594 Jun  4 18:53 stderr.txt
[2025-06-04 18:53:05] HITS file was successfully produced:
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc 179895517 Jun  4 18:42 shared/HITS.pool.root.1
[2025-06-04 18:53:05]  *** Contents of shared directory: ***
[2025-06-04 18:53:05] total 387776
[2025-06-04 18:53:05] -rw-r--r--. 2 boinc boinc 215047511 Jun  4 14:46 ATLAS.root_0
[2025-06-04 18:53:05] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:46 start_atlas.sh
[2025-06-04 18:53:05] -rw-r--r--. 2 boinc boinc    508887 Jun  4 14:46 input.tar.gz
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc 179895517 Jun  4 18:42 HITS.pool.root.1
[2025-06-04 18:53:05] -rw-------. 1 boinc boinc   1607680 Jun  4 18:45 result.tar.gz
18:53:07 (25065): run_atlas exited; CPU time 51356.567309
18:53:07 (25065): called boinc_finish(0)

</stderr_txt>
]]>

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