Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-06-04 04:17:02 (34447): Detected: vboxwrapper 26206
2025-06-04 04:17:02 (34447): Detected: BOINC client v8.0.2
2025-06-04 04:17:02 (34447): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-06-04 04:17:02 (34447): Detected: Sandbox Configuration Enabled
2025-06-04 04:17:02 (34447): Successfully copied 'init_data.xml' to the shared directory.
2025-06-04 04:17:02 (34447): Create VM. (boinc_564e933fa8be790e, slot#2)
2025-06-04 04:17:02 (34447): Setting Memory Size for VM. (4400MB)
2025-06-04 04:17:02 (34447): Setting CPU Count for VM. (4)
2025-06-04 04:17:02 (34447): Setting Chipset Options for VM.
2025-06-04 04:17:02 (34447): Setting Graphics Controller Options for VM.
2025-06-04 04:17:02 (34447): Setting Boot Options for VM.
2025-06-04 04:17:02 (34447): Setting Network Configuration for NAT.
2025-06-04 04:17:02 (34447): Enabling VM Network Access.
2025-06-04 04:17:02 (34447): Disabling USB Support for VM.
2025-06-04 04:17:02 (34447): Disabling COM Port Support for VM.
2025-06-04 04:17:02 (34447): Disabling Audio Support for VM.
2025-06-04 04:17:02 (34447): Disabling Clipboard Support for VM.
2025-06-04 04:17:02 (34447): Disabling Drag and Drop Support for VM.
2025-06-04 04:17:03 (34447): Adding storage controller(s) to VM.
2025-06-04 04:17:03 (34447): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-06-04 04:17:04 (34447): Adding VirtualBox Guest Additions to VM.
2025-06-04 04:17:04 (34447): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-06-04 04:17:04 (34447): forwarding host port 54026 to guest port 80
2025-06-04 04:17:04 (34447): Enabling remote desktop for VM.
2025-06-04 04:17:04 (34447): Required extension pack not installed, remote desktop not enabled.
2025-06-04 04:17:04 (34447): Enabling shared directory for VM.
2025-06-04 04:17:04 (34447): Starting VM using VBoxManage interface. (boinc_564e933fa8be790e, slot#2)
2025-06-04 04:17:07 (34447): Successfully started VM. (PID = '34518')
2025-06-04 04:17:07 (34447): Reporting VM Process ID to BOINC.
2025-06-04 04:17:07 (34447): Guest Log: BIOS: VirtualBox 7.1.4
2025-06-04 04:17:07 (34447): Guest Log: CPUID EDX: 0x178bfbff
2025-06-04 04:17:07 (34447): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-06-04 04:17:07 (34447): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-06-04 04:17:07 (34447): VM state change detected. (old = 'poweredoff', new = 'running')
2025-06-04 04:17:07 (34447): Detected: Web Application Enabled (http://localhost:54026)
2025-06-04 04:17:07 (34447): Preference change detected
2025-06-04 04:17:07 (34447): Setting CPU throttle for VM. (100%)
2025-06-04 04:17:07 (34447): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-06-04 04:17:09 (34447): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-06-04 04:17:09 (34447): Guest Log: BIOS: Booting from Hard Disk...
2025-06-04 04:17:12 (34447): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-06-04 04:17:12 (34447): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-06-04 04:17:12 (34447): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-06-04 04:17:19 (34447): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-06-04 04:17:19 (34447): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-06-04 04:17:27 (34447): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-06-04 04:17:27 (34447): Guest Log: 00:00:00.000104 main     Log opened 2025-06-04T08:17:25.445685000Z
2025-06-04 04:17:27 (34447): Guest Log: 00:00:00.000191 main     OS Product: Linux
2025-06-04 04:17:27 (34447): Guest Log: 00:00:00.000231 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-06-04 04:17:27 (34447): Guest Log: 00:00:00.000266 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-06-04 04:17:27 (34447): Guest Log: 00:00:00.000303 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-06-04 04:17:27 (34447): Guest Log: 00:00:00.000304 main     Process ID: 1302
2025-06-04 04:17:27 (34447): Guest Log: 00:00:00.000305 main     Package type: LINUX_64BITS_GENERIC
2025-06-04 04:17:27 (34447): Guest Log: 00:00:00.001786 main     5.2.32 r132073 started. Verbose level = 0
2025-06-04 04:17:48 (34447): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-06-04 04:17:48 (34447): Guest Log: [INFO] Mounting shared directory
2025-06-04 04:17:48 (34447): Guest Log: [INFO] Checking for init_data.xml
2025-06-04 04:18:36 (34447): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-06-04 04:18:36 (34447): Guest Log: [INFO] Detected branch: prod
2025-06-04 04:18:42 (34447): Guest Log: This is the prod version of the ATLAS job wrapper
2025-06-04 04:18:42 (34447): Guest Log: Copying input files
2025-06-04 04:18:43 (34447): Guest Log: Copied input files into RunAtlas.
2025-06-04 04:18:43 (34447): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-06-04 04:18:43 (34447): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-06-04 04:18:43 (34447): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-06-04 04:18:43 (34447): Guest Log: Further information can be found at the LHC@home message board.
2025-06-04 04:19:38 (34447): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-06-04 04:19:44 (34447): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-06-04 04:19:44 (34447): Guest Log: 2.6.3.0 1609 1 32216 146773 4 1 3117617 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-06-04 04:19:45 (34447): Guest Log: copied the webapp to /var/www
2025-06-04 04:19:45 (34447): Guest Log: ATHENA_PROC_NUMBER=4
2025-06-04 04:19:45 (34447): Guest Log: ATHENA_CORE_NUMBER=4
2025-06-04 04:19:50 (34447): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-06-04 04:19:50 (34447): Guest Log:  *** Starting ATLAS job. (PandaID=6678213783 taskID=45006595) ***
2025-06-04 05:56:42 (34447): Status Report: Elapsed Time: '6000.000000'
2025-06-04 05:56:42 (34447): Status Report: CPU Time: '19108.750000'
2025-06-04 06:00:01 (34447): VM state change detected. (old = 'running', new = 'paused')
2025-06-04 07:00:02 (34447): VM state change detected. (old = 'paused', new = 'running')
2025-06-04 07:00:05 (34447): Guest Log: 01:42:09.136591 timesync vgsvcTimeSyncWorker: Radical host time change: 3 602 164 000 000ns (HostNow=1 749 034 768 635 000 000 ns HostLast=1 749 031 166 471 000 000 ns)
2025-06-04 07:00:15 (34447): Guest Log: 01:42:19.150781 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 604 108 163 000ns (GuestNow=1 749 034 778 669 752 000 ns GuestLast=1 749 031 174 561 589 000 ns fSetTimeLastLoop=true )
2025-06-04 07:02:47 (34447): Guest Log:  *** Job finished ***
2025-06-04 07:02:47 (34447): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:00,789 | INFO     | [data] copytool_out thread has finished
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:00,938 | INFO     | [payload] failed_post thread has finished
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:02,617 | INFO     | [data] queue_monitor thread has finished
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:03,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140501483259712)>', '<ExcThread(monitor, started 140501013468928)>']
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:04,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:04,641 | INFO     | [monitor] control thread has ended
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:08,712 | INFO     | all workflow threads have been joined
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:08,713 | INFO     | end of generic workflow (traces error code: 0)
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:08,713 | INFO     | traces error code: 0
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:08,713 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:08,818 [wrapper] ==== pilot stdout END ====
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:08,826 [wrapper] ==== wrapper stdout RESUME ====
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:08,832 [wrapper] pilotpid: 5969
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:08,841 [wrapper] Pilot exit status: 0
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:09,010 [wrapper] pandaids: 6678213783
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:09,058 [wrapper] cleanup supervisor_pilot  2192 5970
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:09,066 [wrapper] Test setup, not cleaning
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:09,073 [wrapper] apfmon messages muted
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:09,080 [wrapper] ==== wrapper stdout END ====
2025-06-04 07:02:47 (34447): Guest Log: 2025-06-04 11:02:09,086 [wrapper] ==== wrapper stderr END ====
2025-06-04 07:02:47 (34447): Guest Log:  *** Error codes and diagnostics ***
2025-06-04 07:02:47 (34447): Guest Log:     "exeErrorCode": 0,
2025-06-04 07:02:47 (34447): Guest Log:     "exeErrorDiag": "",
2025-06-04 07:02:47 (34447): Guest Log:     "pilotErrorCode": 0,
2025-06-04 07:02:47 (34447): Guest Log:     "pilotErrorDiag": "",
2025-06-04 07:02:47 (34447): Guest Log:  *** Listing of results directory ***
2025-06-04 07:02:47 (34447): Guest Log: total 181356
2025-06-04 07:02:47 (34447): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Jun  3 23:53 pilot3.tar.gz
2025-06-04 07:02:47 (34447): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jun  3 23:54 queuedata.json
2025-06-04 07:02:47 (34447): Guest Log: -rwx------. 1 atlas atlas     37140 Jun  3 23:55 runpilot2-wrapper.sh
2025-06-04 07:02:47 (34447): Guest Log: -rw-r-----. 1 atlas atlas     15093 Jun  4 08:18 start_atlas.sh
2025-06-04 07:02:47 (34447): Guest Log: -rw-r-----. 1 atlas atlas    508878 Jun  4 08:18 input.tar.gz
2025-06-04 07:02:47 (34447): Guest Log: -rw-r--r--. 1 atlas atlas      8646 Jun  4 08:18 init_data.xml
2025-06-04 07:02:47 (34447): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jun  4 08:18 EVNT.45006593._001950.pool.root.1 -> /data/./ATLAS.root_0
2025-06-04 07:02:47 (34447): Guest Log: -rw-r--r--. 1 atlas atlas      2525 Jun  4 08:19 pandaJob.out
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas    986774 Jun  4 08:23 agis_schedconf.cvmfs.json
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas   1603667 Jun  4 08:23 agis_ddmendpoints.agis.ALL.json
2025-06-04 07:02:47 (34447): Guest Log: drwx------. 4 atlas atlas      4096 Jun  4 08:23 pilot3
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas 180470669 Jun  4 11:00 HITS.45006595._048623.pool.root.1
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas      1032 Jun  4 11:01 memory_monitor_summary.json
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas    255297 Jun  4 11:01 log.45006595._048623.job.log.tgz.1
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas        97 Jun  4 11:01 pilot_heartbeat.json
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas      7696 Jun  4 11:01 heartbeat.json
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas      4536 Jun  4 11:02 pilotlog.txt
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas    478382 Jun  4 11:02 log.45006595._048623.job.log.1
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas       357 Jun  4 11:02 output.list
2025-06-04 07:02:47 (34447): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jun  4 11:02 runtime_log
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas    757760 Jun  4 11:02 result.tar.gz
2025-06-04 07:02:47 (34447): Guest Log: -rw-r--r--. 1 atlas atlas      8624 Jun  4 11:02 runtime_log.err
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas       667 Jun  4 11:02 pQNLDmMeqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMamKDmmKr1Jo.diag
2025-06-04 07:02:47 (34447): Guest Log: Looking for outputfile HITS.45006595._048623.pool.root.1
2025-06-04 07:02:47 (34447): Guest Log: HITS file was successfully produced
2025-06-04 07:02:47 (34447): Guest Log: -rw-------. 1 atlas atlas 180470669 Jun  4 11:00 /home/atlas/RunAtlas/HITS.45006595._048623.pool.root.1
2025-06-04 07:02:47 (34447): Guest Log: Successfully finished the ATLAS job!
2025-06-04 07:02:47 (34447): Guest Log: Copying the results back to the shared directory!
2025-06-04 07:02:47 (34447): Guest Log:  *** Contents of shared directory: ***
2025-06-04 07:02:47 (34447): Guest Log: total 210332
2025-06-04 07:02:47 (34447): Guest Log: -rw-rw----. 1 root root 214078148 Jun  4 08:17 ATLAS.root_0
2025-06-04 07:02:47 (34447): Guest Log: -rw-rw-r--. 1 root root      8646 Jun  4 08:17 init_data.xml
2025-06-04 07:02:47 (34447): Guest Log: -rw-rw----. 1 root root    508878 Jun  4 08:17 input.tar.gz
2025-06-04 07:02:47 (34447): Guest Log: -rw-r--r--. 1 root root    757760 Jun  4  2025 result.tar.gz
2025-06-04 07:02:47 (34447): Guest Log: -rw-rw----. 1 root root     15093 Jun  4 08:17 start_atlas.sh
2025-06-04 07:02:47 (34447): Guest Log:  *** Success! Shutting down the machine. ***
2025-06-04 07:02:47 (34447): VM Completion File Detected.
2025-06-04 07:02:47 (34447): Powering off VM.
2025-06-04 07:02:47 (34447): Successfully stopped VM.
2025-06-04 07:02:47 (34447): Deregistering VM. (boinc_564e933fa8be790e, slot#2)
2025-06-04 07:02:47 (34447): Removing network bandwidth throttle group from VM.
2025-06-04 07:02:47 (34447): Removing VM from VirtualBox.
07:02:52 (34447): called boinc_finish(0)

</stderr_txt>
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