Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:56:40 (32600): wrapper (7.7.26015): starting
00:56:40 (32600): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:56:40] Arguments: --nthreads 8
[2025-06-04 00:56:40] Threads: 8
[2025-06-04 00:56:40] Checking for CVMFS
[2025-06-04 00:56:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:56:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:56:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:56:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:56:40] 2.11.2.0 2853 35230 93436 146768 3 58 12585698 20275201 1 130560 0 11603696 99.957 6850693 7855 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 00:56:40] CVMFS is ok
[2025-06-04 00:56:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:56:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:56:40] Further information can be found at the LHC@home message board.
[2025-06-04 00:56:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:56:40] Checking for apptainer binary...
[2025-06-04 00:56:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:56:40] Running /usr/bin/apptainer --version
[2025-06-04 00:56:40] apptainer version 1.3.2-1.el7
[2025-06-04 00:56:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:56:42] c-204-7.aglt2.org
[2025-06-04 00:56:42] apptainer works
[2025-06-04 00:56:42] Set ATHENA_PROC_NUMBER=8
[2025-06-04 00:56:42] Set ATHENA_CORE_NUMBER=8
[2025-06-04 00:56:42] Starting ATLAS job with PandaID=6678212689
[2025-06-04 00:56:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:46:53]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:46:53] 2025-06-04 06:46:37,261 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678212689/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:46:53] 2025-06-04 06:46:37,262 | INFO     | extracted standard info from prmon json
[2025-06-04 02:46:53] 2025-06-04 06:46:37,262 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:46:53] 2025-06-04 06:46:37,262 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:46:53] 2025-06-04 06:46:37,263 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:46:53] 2025-06-04 06:46:37,263 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:46:53] 2025-06-04 06:46:37,266 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:46:53] 2025-06-04 06:46:37,267 | INFO     | sum of square deviations: 390582207.0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,267 | INFO     | sum of deviations: -800179242.500001
[2025-06-04 02:46:53] 2025-06-04 06:46:37,268 | INFO     | mean x: 1749016315.5
[2025-06-04 02:46:53] 2025-06-04 06:46:37,268 | INFO     | mean y: 2454351.342592593
[2025-06-04 02:46:53] 2025-06-04 06:46:37,268 | INFO     | -- intersect: 3585634858.2235236
[2025-06-04 02:46:53] 2025-06-04 06:46:37,268 | INFO     | intersect: 3585634858.2235236
[2025-06-04 02:46:53] 2025-06-04 06:46:37,269 | INFO     | chi2: 2.313555989093675
[2025-06-04 02:46:53] 2025-06-04 06:46:37,269 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,270 | INFO     | sum of deviations: 6124240301.999999
[2025-06-04 02:46:53] 2025-06-04 06:46:37,270 | INFO     | mean x: 1749016163.0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,270 | INFO     | mean y: 2473968.7378640776
[2025-06-04 02:46:53] 2025-06-04 06:46:37,270 | INFO     | -- intersect: -31612795389.302406
[2025-06-04 02:46:53] 2025-06-04 06:46:37,270 | INFO     | intersect: -31612795389.302406
[2025-06-04 02:46:53] 2025-06-04 06:46:37,271 | INFO     | chi2: 1.5549471546926485
[2025-06-04 02:46:53] 2025-06-04 06:46:37,271 | INFO     | current chi2=1.5549471546926485 (change=32.78973311980265 %)
[2025-06-04 02:46:53] 2025-06-04 06:46:37,271 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 02:46:53] 2025-06-04 06:46:37,272 | INFO     | sum of deviations: 5886410634.999999
[2025-06-04 02:46:53] 2025-06-04 06:46:37,272 | INFO     | mean x: 1749016010.5
[2025-06-04 02:46:53] 2025-06-04 06:46:37,272 | INFO     | mean y: 2473196.9591836734
[2025-06-04 02:46:53] 2025-06-04 06:46:37,272 | INFO     | -- intersect: -35277878973.180565
[2025-06-04 02:46:53] 2025-06-04 06:46:37,272 | INFO     | intersect: -35277878973.180565
[2025-06-04 02:46:53] 2025-06-04 06:46:37,273 | INFO     | chi2: 1.55834334151504
[2025-06-04 02:46:53] 2025-06-04 06:46:37,273 | INFO     | current chi2=1.55834334151504 (change=-0.21841171979010454 %)
[2025-06-04 02:46:53] 2025-06-04 06:46:37,273 | INFO     | right removable region: 97
[2025-06-04 02:46:53] 2025-06-04 06:46:37,273 | INFO     | sum of square deviations: 338804492.0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,274 | INFO     | sum of deviations: -16044583620.999996
[2025-06-04 02:46:53] 2025-06-04 06:46:37,274 | INFO     | mean x: 1749016468.0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,274 | INFO     | mean y: 2498224.9708737866
[2025-06-04 02:46:53] 2025-06-04 06:46:37,274 | INFO     | -- intersect: 82829738234.91757
[2025-06-04 02:46:53] 2025-06-04 06:46:37,274 | INFO     | intersect: 82829738234.91757
[2025-06-04 02:46:53] 2025-06-04 06:46:37,275 | INFO     | chi2: 0.8897736625756374
[2025-06-04 02:46:53] 2025-06-04 06:46:37,275 | INFO     | current chi2=0.8897736625756374 (change=61.5408632092711 %)
[2025-06-04 02:46:53] 2025-06-04 06:46:37,275 | INFO     | sum of square deviations: 291817564.5
[2025-06-04 02:46:53] 2025-06-04 06:46:37,275 | INFO     | sum of deviations: -12727962320.0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,276 | INFO     | mean x: 1749016620.5
[2025-06-04 02:46:53] 2025-06-04 06:46:37,276 | INFO     | mean y: 2487426.7959183673
[2025-06-04 02:46:53] 2025-06-04 06:46:37,276 | INFO     | -- intersect: 76287880600.16585
[2025-06-04 02:46:53] 2025-06-04 06:46:37,276 | INFO     | intersect: 76287880600.16585
[2025-06-04 02:46:53] 2025-06-04 06:46:37,276 | INFO     | chi2: 0.8806674815548319
[2025-06-04 02:46:53] 2025-06-04 06:46:37,276 | INFO     | current chi2=0.8806674815548319 (change=1.0234266762230022 %)
[2025-06-04 02:46:53] 2025-06-04 06:46:37,276 | INFO     | left removable region: 20
[2025-06-04 02:46:53] 2025-06-04 06:46:37,277 | INFO     | sum of square deviations: 141539398.0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,277 | INFO     | sum of deviations: 409889988.0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,277 | INFO     | mean x: 1749016590.0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,277 | INFO     | mean y: 2483624.1688311687
[2025-06-04 02:46:53] 2025-06-04 06:46:37,277 | INFO     | -- intersect: -5062568221.585812
[2025-06-04 02:46:53] 2025-06-04 06:46:37,278 | INFO     | intersect: -5062568221.585812
[2025-06-04 02:46:53] 2025-06-04 06:46:37,278 | INFO     | chi2: 0.000123170546703337
[2025-06-04 02:46:53] 2025-06-04 06:46:37,278 | INFO     | -- intersect: -5062568221.585812
[2025-06-04 02:46:53] 2025-06-04 06:46:37,278 | INFO     | current memory leak: 2.90 B/s (using 77 data points, chi2=0.00)
[2025-06-04 02:46:53] 2025-06-04 06:46:37,278 | INFO     | ..............................
[2025-06-04 02:46:53] 2025-06-04 06:46:37,279 | INFO     | . Timing measurements:
[2025-06-04 02:46:53] 2025-06-04 06:46:37,279 | INFO     | . get job = 0 s
[2025-06-04 02:46:53] 2025-06-04 06:46:37,279 | INFO     | . initial setup = 2 s
[2025-06-04 02:46:53] 2025-06-04 06:46:37,279 | INFO     | . payload setup = 11 s
[2025-06-04 02:46:53] 2025-06-04 06:46:37,279 | INFO     | . stage-in = 0 s
[2025-06-04 02:46:53] 2025-06-04 06:46:37,279 | INFO     | . payload execution = 6539 s
[2025-06-04 02:46:53] 2025-06-04 06:46:37,279 | INFO     | . stage-out = 0 s
[2025-06-04 02:46:53] 2025-06-04 06:46:37,279 | INFO     | . log creation = 0 s
[2025-06-04 02:46:53] 2025-06-04 06:46:37,279 | INFO     | ..............................
[2025-06-04 02:46:53] 2025-06-04 06:46:37,608 | INFO     | 
[2025-06-04 02:46:53] 2025-06-04 06:46:37,608 | INFO     | job summary report
[2025-06-04 02:46:53] 2025-06-04 06:46:37,608 | INFO     | --------------------------------------------------
[2025-06-04 02:46:53] 2025-06-04 06:46:37,609 | INFO     | PanDA job id: 6678212689
[2025-06-04 02:46:53] 2025-06-04 06:46:37,609 | INFO     | task id: 45006595
[2025-06-04 02:46:53] 2025-06-04 06:46:37,609 | INFO     | errors: (none)
[2025-06-04 02:46:53] 2025-06-04 06:46:37,609 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:46:53] 2025-06-04 06:46:37,609 | INFO     | pilot state: finished 
[2025-06-04 02:46:53] 2025-06-04 06:46:37,609 | INFO     | transexitcode: 0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,610 | INFO     | exeerrorcode: 0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,610 | INFO     | exeerrordiag: 
[2025-06-04 02:46:53] 2025-06-04 06:46:37,610 | INFO     | exitcode: 0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,610 | INFO     | exitmsg: OK
[2025-06-04 02:46:53] 2025-06-04 06:46:37,610 | INFO     | cpuconsumptiontime: 48717 s
[2025-06-04 02:46:53] 2025-06-04 06:46:37,610 | INFO     | nevents: 400
[2025-06-04 02:46:53] 2025-06-04 06:46:37,611 | INFO     | neventsw: 0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,611 | INFO     | pid: 10479
[2025-06-04 02:46:53] 2025-06-04 06:46:37,611 | INFO     | pgrp: 10479
[2025-06-04 02:46:53] 2025-06-04 06:46:37,611 | INFO     | corecount: 8
[2025-06-04 02:46:53] 2025-06-04 06:46:37,611 | INFO     | event service: False
[2025-06-04 02:46:53] 2025-06-04 06:46:37,611 | INFO     | sizes: {0: 2405013, 1: 2405212, 7: 2405418, 12: 2405446, 6555: 2432342, 6556: 2441283, 6557: 2441467, 6562: 2441637}
[2025-06-04 02:46:53] 2025-06-04 06:46:37,611 | INFO     | --------------------------------------------------
[2025-06-04 02:46:53] 2025-06-04 06:46:37,612 | INFO     | 
[2025-06-04 02:46:53] 2025-06-04 06:46:37,612 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:46:53] 2025-06-04 06:46:37,640 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,641 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,641 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,641 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,644 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:46:53] 2025-06-04 06:46:37,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,644 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:46:53] 2025-06-04 06:46:37,644 | INFO     | job 6678212689 has completed (purged errors)
[2025-06-04 02:46:53] 2025-06-04 06:46:37,644 | INFO     | overall cleanup function is called
[2025-06-04 02:46:53] 2025-06-04 06:46:38,653 | INFO     | --- collectZombieJob: --- 10, [10479]
[2025-06-04 02:46:53] 2025-06-04 06:46:38,653 | INFO     | zombie collector waiting for pid 10479
[2025-06-04 02:46:53] 2025-06-04 06:46:38,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:46:53] 2025-06-04 06:46:38,653 | INFO     | collected zombie processes
[2025-06-04 02:46:53] 2025-06-04 06:46:38,653 | INFO     | will attempt to kill all subprocesses of pid=10479
[2025-06-04 02:46:53] 2025-06-04 06:46:38,744 | INFO     | process IDs to be killed: [10479] (in reverse order)
[2025-06-04 02:46:53] 2025-06-04 06:46:38,805 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:46:53] 2025-06-04 06:46:38,806 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:46:53] 2025-06-04 06:46:38,810 | INFO     | did not find any defunct processes belonging to 10479
[2025-06-04 02:46:53] 2025-06-04 06:46:38,813 | INFO     | did not find any defunct processes belonging to 10479
[2025-06-04 02:46:53] 2025-06-04 06:46:38,813 | INFO     | ready for new job
[2025-06-04 02:46:53] 2025-06-04 06:46:38,813 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:46:53] 2025-06-04 06:46:38,815 | INFO     | **************************************
[2025-06-04 02:46:53] 2025-06-04 06:46:38,815 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:46:53] 2025-06-04 06:46:38,815 | INFO     | **************************************
[2025-06-04 02:46:53] 2025-06-04 06:46:38,815 | INFO     | 
[2025-06-04 02:46:53] 2025-06-04 06:46:38,816 | INFO     | architecture information:
[2025-06-04 02:46:53] 2025-06-04 06:46:38,816 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:46:53] 2025-06-04 06:46:38,836 | INFO     | cat /etc/os-release:
[2025-06-04 02:46:53] NAME="CentOS Linux"
[2025-06-04 02:46:53] VERSION="7 (Core)"
[2025-06-04 02:46:53] ID="centos"
[2025-06-04 02:46:53] ID_LIKE="rhel fedora"
[2025-06-04 02:46:53] VERSION_ID="7"
[2025-06-04 02:46:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:46:53] ANSI_COLOR="0;31"
[2025-06-04 02:46:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:46:53] HOME_URL="https://www.centos.org/"
[2025-06-04 02:46:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:46:53] 
[2025-06-04 02:46:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:46:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:46:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:46:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:46:53] 
[2025-06-04 02:46:53] 2025-06-04 06:46:38,836 | INFO     | **************************************
[2025-06-04 02:46:53] 2025-06-04 06:46:39,340 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:46:53] 2025-06-04 06:46:39,360 | INFO     | sufficient remaining disk space (18648924160 B)
[2025-06-04 02:46:53] 2025-06-04 06:46:39,360 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:46:53] 2025-06-04 06:46:39,361 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:46:53] 2025-06-04 06:46:39,361 | INFO     | update_server=False
[2025-06-04 02:46:53] 2025-06-04 06:46:39,361 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:46:53] 2025-06-04 06:46:39,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:46:53] 2025-06-04 06:46:39,362 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:46:53] 2025-06-04 06:46:39,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:46:53] 2025-06-04 06:46:39,813 | INFO     | aborting loop
[2025-06-04 02:46:53] 2025-06-04 06:46:40,007 | INFO     | all data control threads have been joined
[2025-06-04 02:46:53] 2025-06-04 06:46:40,204 | INFO     | all payload control threads have been joined
[2025-06-04 02:46:53] 2025-06-04 06:46:40,367 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:40,368 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:40,471 | INFO     | PID=3939 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-04 02:46:53] 2025-06-04 06:46:40,471 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:46:53] 2025-06-04 06:46:40,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:46:53] 2025-06-04 06:46:40,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:46:53] 2025-06-04 06:46:40,497 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:40,677 | INFO     | all job control threads have been joined
[2025-06-04 02:46:53] 2025-06-04 06:46:40,737 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:40,777 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:40,782 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:40,819 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:40,974 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:41,009 | INFO     | [data] control thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:41,210 | INFO     | [payload] control thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:41,357 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:41,368 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:41,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:41,392 | INFO     | [job] validate thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:41,682 | INFO     | [job] control thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:42,095 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:46:53] 2025-06-04 06:46:46,101 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:46:53] 2025-06-04 06:46:48,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354995611456)>', '<ExcThread(monitor, started 140354263168768)>']
[2025-06-04 02:46:53] 2025-06-04 06:46:48,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:46:53] 2025-06-04 06:46:48,507 | INFO     | [monitor] control thread has ended
[2025-06-04 02:46:53] 2025-06-04 06:46:53,211 | INFO     | all workflow threads have been joined
[2025-06-04 02:46:53] 2025-06-04 06:46:53,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:46:53] 2025-06-04 06:46:53,212 | INFO     | traces error code: 0
[2025-06-04 02:46:53] 2025-06-04 06:46:53,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:46:53] 2025-06-04 06:46:53,322 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:46:53] 2025-06-04 06:46:53,327 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:46:53] 2025-06-04 06:46:53,332 [wrapper] pilotpid: 3939
[2025-06-04 02:46:53] 2025-06-04 06:46:53,338 [wrapper] Pilot exit status: 0
[2025-06-04 02:46:53] 2025-06-04 06:46:53,356 [wrapper] pandaids: 6678212689
[2025-06-04 02:46:53] 2025-06-04 06:46:53,399 [wrapper] cleanup supervisor_pilot 14490 3940
[2025-06-04 02:46:53] 2025-06-04 06:46:53,403 [wrapper] Test setup, not cleaning
[2025-06-04 02:46:53] 2025-06-04 06:46:53,408 [wrapper] apfmon messages muted
[2025-06-04 02:46:53] 2025-06-04 06:46:53,412 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:46:53] 2025-06-04 06:46:53,417 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:46:53]  *** Error codes and diagnostics ***
[2025-06-04 02:46:53]     "exeErrorCode": 0,
[2025-06-04 02:46:53]     "exeErrorDiag": "",
[2025-06-04 02:46:53]     "pilotErrorCode": 0,
[2025-06-04 02:46:53]     "pilotErrorDiag": "",
[2025-06-04 02:46:53]  *** Listing of results directory ***
[2025-06-04 02:46:53] total 385396
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 19:42 pilot3.tar.gz
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 19:50 queuedata.json
[2025-06-04 02:46:53] -rwx------ 1 boincer umatlas     37140 Jun  3 19:50 runpilot2-wrapper.sh
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas       100 Jun  4 00:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:46:53] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 00:56 run_atlas
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas       105 Jun  4 00:56 job.xml
[2025-06-04 02:46:53] -rw-r--r-- 2 boincer umatlas 213976228 Jun  4 00:56 EVNT.45006593._001947.pool.root.1
[2025-06-04 02:46:53] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 00:56 start_atlas.sh
[2025-06-04 02:46:53] drwxrwx--x 2 boincer umatlas      4096 Jun  4 00:56 shared
[2025-06-04 02:46:53] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 00:56 input.tar.gz
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas         0 Jun  4 00:56 boinc_lockfile
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 00:56 pandaJob.out
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas    986745 Jun  4 00:56 agis_schedconf.cvmfs.json
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas   1603667 Jun  4 00:56 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:46:53] drwx------ 4 boincer umatlas      4096 Jun  4 00:56 pilot3
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 02:37 init_data.xml
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas 174955837 Jun  4 02:45 HITS.45006595._048548.pool.root.1
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas       529 Jun  4 02:46 boinc_task_state.xml
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas      1051 Jun  4 02:46 memory_monitor_summary.json
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas        95 Jun  4 02:46 pilot_heartbeat.json
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas    331765 Jun  4 02:46 log.45006595._048548.job.log.tgz.1
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas      7744 Jun  4 02:46 heartbeat.json
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 02:46 boinc_mmap_file
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas        27 Jun  4 02:46 wrapper_checkpoint.txt
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas      4669 Jun  4 02:46 pilotlog.txt
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas    607627 Jun  4 02:46 log.45006595._048548.job.log.1
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas       357 Jun  4 02:46 output.list
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas       620 Jun  4 02:46 runtime_log
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas    962560 Jun  4 02:46 result.tar.gz
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 02:46 runtime_log.err
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas       657 Jun  4 02:46 QI7MDmwZqg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCZmKDmfykoRn.diag
[2025-06-04 02:46:53] -rw-r--r-- 1 boincer umatlas     20898 Jun  4 02:46 stderr.txt
[2025-06-04 02:46:53] HITS file was successfully produced:
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas 174955837 Jun  4 02:45 shared/HITS.pool.root.1
[2025-06-04 02:46:53]  *** Contents of shared directory: ***
[2025-06-04 02:46:53] total 381280
[2025-06-04 02:46:53] -rw-r--r-- 2 boincer umatlas 213976228 Jun  4 00:56 ATLAS.root_0
[2025-06-04 02:46:53] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 00:56 start_atlas.sh
[2025-06-04 02:46:53] -rw-r--r-- 2 boincer umatlas    508882 Jun  4 00:56 input.tar.gz
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas 174955837 Jun  4 02:45 HITS.pool.root.1
[2025-06-04 02:46:53] -rw------- 1 boincer umatlas    962560 Jun  4 02:46 result.tar.gz
02:46:55 (32600): run_atlas exited; CPU time 48673.390301
02:46:55 (32600): called boinc_finish(0)

</stderr_txt>
]]>

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