Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:37:49 (1131946): wrapper (7.7.26015): starting
21:37:49 (1131946): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 21:37:49] Arguments: --nthreads 12
[2025-06-03 21:37:49] Threads: 12
[2025-06-03 21:37:49] Checking for CVMFS
[2025-06-03 21:37:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 21:37:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 21:37:50] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 21:37:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 21:37:52] 2.11.5.0 1551326 32593 207244 146768 0 405 36980092 45568001 22294 130560 0 316825913 99.808 180011878 16016 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-03 21:37:52] CVMFS is ok
[2025-06-03 21:37:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 21:37:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 21:37:52] Further information can be found at the LHC@home message board.
[2025-06-03 21:37:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 21:37:52] Checking for apptainer binary...
[2025-06-03 21:37:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 21:37:52] Running /usr/bin/apptainer --version
[2025-06-03 21:37:52] apptainer version 1.4.0-1.el9
[2025-06-03 21:37:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 21:37:53] wns0085.triumf.lcg
[2025-06-03 21:37:53] apptainer works
[2025-06-03 21:37:53] Set ATHENA_PROC_NUMBER=12
[2025-06-03 21:37:53] Set ATHENA_CORE_NUMBER=12
[2025-06-03 21:37:53] Starting ATLAS job with PandaID=6678285502
[2025-06-03 21:37:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 21:43:33]  *** The last 200 lines of the pilot log: ***
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | WARNING  | wrong length of table data, x=[1749012028.0], y=[1453.0] (must be same and length>=4)
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | ..............................
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . Timing measurements:
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . get job = 0 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . initial setup = 5 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . payload setup = 21 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . stage-in = 0 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . payload execution = 51 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | . stage-out = 1 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | . log creation = 0 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | ..............................
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678285502/pilotlog.txt
[2025-06-03 21:43:33] 2025-06-04 04:43:20,706 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-03 21:43:33] - Log from pilotlog.txt -
[2025-06-03 21:43:33] 2025-06-04 04:43:20,564 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 21:43:33] 2025-06-04 04:43:20,565 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678285502/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | INFO     | extracted standard info from prmon json
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | WARNING  | wrong length of table data, x=[1749012028.0], y=[1453.0] (must be same and length>=4)
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | ..............................
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . Timing measurements:
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . get job = 0 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . initial setup = 5 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . payload setup = 21 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . stage-in = 0 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . payload execution = 51 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | . stage-out = 1 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | . log creation = 0 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | ..............................
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678285502/pilotlog.txt
[2025-06-03 21:43:33] 2025-06-04 04:43:20,706 | WARNING  | 
[2025-06-03 21:43:33] [begin log extracts]
[2025-06-03 21:43:33] - Log from pilotlog.txt -
[2025-06-03 21:43:33] 2025-06-04 04:43:20,564 | INFO     | CPU arch script returned: x86-64-v4
[2025-06-03 21:43:33] 2025-06-04 04:43:20,565 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6678285502/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | INFO     | extracted standard info from prmon json
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 21:43:33] 2025-06-04 04:43:20,567 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | WARNING  | wrong length of table data, x=[1749012028.0], y=[1453.0] (must be same and length>=4)
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | ..............................
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . Timing measurements:
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . get job = 0 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . initial setup = 5 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . payload setup = 21 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . stage-in = 0 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,568 | INFO     | . payload execution = 51 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | . stage-out = 1 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | . log creation = 0 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | ..............................
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-03 21:43:33] 2025-06-04 04:43:20,569 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6678285502/pilotlog.txt
[2025-06-03 21:43:33] [end log extracts]
[2025-06-03 21:43:33] 2025-06-04 04:43:20,706 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-03 21:43:33] 2025-06-04 04:43:20,707 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-03 21:43:33] 2025-06-04 04:43:20,948 | INFO     | 
[2025-06-03 21:43:33] 2025-06-04 04:43:20,948 | INFO     | job summary report
[2025-06-03 21:43:33] 2025-06-04 04:43:20,948 | INFO     | --------------------------------------------------
[2025-06-03 21:43:33] 2025-06-04 04:43:20,948 | INFO     | PanDA job id: 6678285502
[2025-06-03 21:43:33] 2025-06-04 04:43:20,948 | INFO     | task id: 45006595
[2025-06-03 21:43:33] 2025-06-04 04:43:20,948 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-03 21:40:52,541 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-03 21:43:33] 2025-06-04 04:43:20,948 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 21:43:33] 2025-06-04 04:43:20,948 | INFO     | pilot state: failed 
[2025-06-03 21:43:33] 2025-06-04 04:43:20,948 | INFO     | transexitcode: 65
[2025-06-03 21:43:33] 2025-06-04 04:43:20,948 | INFO     | exeerrorcode: 65
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | exitcode: 65
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | cpuconsumptiontime: 17 s
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | nevents: 0
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | neventsw: 0
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | pid: 1149351
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | pgrp: 1149351
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | corecount: 12
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | event service: False
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | sizes: {0: 2404954, 1: 2405038, 2: 2405237, 14: 2405237, 25: 2405265, 27: 2405499, 35: 2405655, 78: 2428888, 79: 2428864, 81: 2433155, 82: 2433183, 217: 2433633}
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | --------------------------------------------------
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | 
[2025-06-03 21:43:33] 2025-06-04 04:43:20,949 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,094 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 21:43:33] 2025-06-04 04:43:21,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,094 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 21:43:33] 2025-06-04 04:43:21,094 | INFO     | job 6678285502 has completed (purged errors)
[2025-06-03 21:43:33] 2025-06-04 04:43:21,094 | INFO     | overall cleanup function is called
[2025-06-03 21:43:33] 2025-06-04 04:43:22,126 | INFO     | --- collectZombieJob: --- 10, [1149351]
[2025-06-03 21:43:33] 2025-06-04 04:43:22,126 | INFO     | zombie collector waiting for pid 1149351
[2025-06-03 21:43:33] 2025-06-04 04:43:22,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 21:43:33] 2025-06-04 04:43:22,127 | INFO     | collected zombie processes
[2025-06-03 21:43:33] 2025-06-04 04:43:22,127 | INFO     | will attempt to kill all subprocesses of pid=1149351
[2025-06-03 21:43:33] 2025-06-04 04:43:22,403 | INFO     | PID=1139070 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 21:43:33] 2025-06-04 04:43:22,403 | INFO     | .. there are 34 such processes running
[2025-06-03 21:43:33] 2025-06-04 04:43:22,519 | INFO     | process IDs to be killed: [1149351] (in reverse order)
[2025-06-03 21:43:33] 2025-06-04 04:43:22,600 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 21:43:33] 2025-06-04 04:43:22,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 21:43:33] 2025-06-04 04:43:22,624 | INFO     | did not find any defunct processes belonging to 1149351
[2025-06-03 21:43:33] 2025-06-04 04:43:22,634 | INFO     | did not find any defunct processes belonging to 1149351
[2025-06-03 21:43:33] 2025-06-04 04:43:22,634 | INFO     | ready for new job
[2025-06-03 21:43:33] 2025-06-04 04:43:22,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 21:43:33] 2025-06-04 04:43:22,636 | INFO     | **************************************
[2025-06-03 21:43:33] 2025-06-04 04:43:22,636 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 21:43:33] 2025-06-04 04:43:22,636 | INFO     | **************************************
[2025-06-03 21:43:33] 2025-06-04 04:43:22,636 | INFO     | 
[2025-06-03 21:43:33] 2025-06-04 04:43:22,638 | INFO     | architecture information:
[2025-06-03 21:43:33] 2025-06-04 04:43:22,638 | INFO     | executing command: cat /etc/os-release
[2025-06-03 21:43:33] 2025-06-04 04:43:22,660 | INFO     | cat /etc/os-release:
[2025-06-03 21:43:33] NAME="CentOS Linux"
[2025-06-03 21:43:33] VERSION="7 (Core)"
[2025-06-03 21:43:33] ID="centos"
[2025-06-03 21:43:33] ID_LIKE="rhel fedora"
[2025-06-03 21:43:33] VERSION_ID="7"
[2025-06-03 21:43:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 21:43:33] ANSI_COLOR="0;31"
[2025-06-03 21:43:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 21:43:33] HOME_URL="https://www.centos.org/"
[2025-06-03 21:43:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 21:43:33] 
[2025-06-03 21:43:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 21:43:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 21:43:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 21:43:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 21:43:33] 
[2025-06-03 21:43:33] 2025-06-04 04:43:22,660 | INFO     | **************************************
[2025-06-03 21:43:33] 2025-06-04 04:43:23,163 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-03 21:43:33] 2025-06-04 04:43:23,268 | INFO     | sufficient remaining disk space (1801243852800 B)
[2025-06-03 21:43:33] 2025-06-04 04:43:23,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 21:43:33] 2025-06-04 04:43:23,268 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 21:43:33] 2025-06-04 04:43:23,268 | INFO     | update_server=False
[2025-06-03 21:43:33] 2025-06-04 04:43:23,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 21:43:33] 2025-06-04 04:43:23,269 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 21:43:33] 2025-06-04 04:43:23,269 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 21:43:33] 2025-06-04 04:43:23,270 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 21:43:33] 2025-06-04 04:43:23,270 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 21:43:33] 2025-06-04 04:43:23,270 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 21:43:33] 2025-06-04 04:43:23,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:43:33] 2025-06-04 04:43:23,383 | INFO     | aborting loop
[2025-06-03 21:43:33] 2025-06-04 04:43:23,719 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 21:43:33] 2025-06-04 04:43:23,849 | INFO     | all data control threads have been joined
[2025-06-03 21:43:33] 2025-06-04 04:43:23,952 | INFO     | all job control threads have been joined
[2025-06-03 21:43:33] 2025-06-04 04:43:24,274 | INFO     | [job] retrieve thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:24,382 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:24,388 | INFO     | [job] job monitor thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:24,513 | INFO     | all payload control threads have been joined
[2025-06-03 21:43:33] 2025-06-04 04:43:24,855 | INFO     | [data] control thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:24,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:24,958 | INFO     | [job] control thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:24,965 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:25,297 | INFO     | [job] validate thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:25,303 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:25,512 | INFO     | [payload] failed_post thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:25,519 | INFO     | [payload] control thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:25,717 | INFO     | [data] copytool_in thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:25,728 | INFO     | [payload] validate_post thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:25,734 | INFO     | [data] copytool_out thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:25,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 21:43:33] 2025-06-04 04:43:27,004 | INFO     | [job] queue monitor thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:27,283 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 21:43:33] 2025-06-04 04:43:28,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140097671235392)>', '<ExcThread(monitor, started 140096950998784)>']
[2025-06-03 21:43:33] 2025-06-04 04:43:28,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 21:43:33] 2025-06-04 04:43:28,303 | INFO     | [monitor] control thread has ended
[2025-06-03 21:43:33] 2025-06-04 04:43:33,306 | INFO     | all workflow threads have been joined
[2025-06-03 21:43:33] 2025-06-04 04:43:33,306 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 21:43:33] 2025-06-04 04:43:33,307 | INFO     | traces error code: 0
[2025-06-03 21:43:33] 2025-06-04 04:43:33,307 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 21:43:33] 2025-06-04 04:43:33,524 [wrapper] ==== pilot stdout END ====
[2025-06-03 21:43:33] 2025-06-04 04:43:33,554 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 21:43:33] 2025-06-04 04:43:33,586 [wrapper] pilotpid: 1139070
[2025-06-03 21:43:33] 2025-06-04 04:43:33,605 [wrapper] Pilot exit status: 0
[2025-06-03 21:43:33] 2025-06-04 04:43:33,650 [wrapper] pandaids: 6678285502
[2025-06-03 21:43:33] 2025-06-04 04:43:33,701 [wrapper] cleanup supervisor_pilot 1139076 1139071
[2025-06-03 21:43:33] 2025-06-04 04:43:33,707 [wrapper] Test setup, not cleaning
[2025-06-03 21:43:33] 2025-06-04 04:43:33,715 [wrapper] apfmon messages muted
[2025-06-03 21:43:33] 2025-06-04 04:43:33,717 [wrapper] ==== wrapper stdout END ====
[2025-06-03 21:43:33] 2025-06-04 04:43:33,719 [wrapper] ==== wrapper stderr END ====
[2025-06-03 21:43:33]  *** Error codes and diagnostics ***
[2025-06-03 21:43:33]     "exeErrorCode": 65,
[2025-06-03 21:43:33]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:43:33]     "pilotErrorCode": 1305,
[2025-06-03 21:43:33]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-03 21:43:33]  *** Listing of results directory ***
[2025-06-03 21:43:33] total 215772
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc    495897 Jun  3 18:59 pilot3.tar.gz
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc      5111 Jun  3 19:27 queuedata.json
[2025-06-03 21:43:33] -rwx------. 1 boinc boinc     37140 Jun  3 19:28 runpilot2-wrapper.sh
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc       100 Jun  3 21:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 21:43:33] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 21:37 run_atlas
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc       105 Jun  3 21:37 job.xml
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc      6601 Jun  3 21:37 init_data.xml
[2025-06-03 21:43:33] -rw-r--r--. 2 boinc boinc 216911482 Jun  3 21:37 EVNT.45006593._002032.pool.root.1
[2025-06-03 21:43:33] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:37 start_atlas.sh
[2025-06-03 21:43:33] drwxrwx--x. 2 boinc boinc      4096 Jun  3 21:37 shared
[2025-06-03 21:43:33] -rw-r--r--. 2 boinc boinc    508881 Jun  3 21:37 input.tar.gz
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc         0 Jun  3 21:37 boinc_lockfile
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc      2525 Jun  3 21:37 pandaJob.out
[2025-06-03 21:43:33] -rw-------. 1 boinc boinc    986745 Jun  3 21:38 agis_schedconf.cvmfs.json
[2025-06-03 21:43:33] -rw-------. 1 boinc boinc   1603667 Jun  3 21:38 agis_ddmendpoints.agis.ALL.json
[2025-06-03 21:43:33] drwx------. 4 boinc boinc      4096 Jun  3 21:38 pilot3
[2025-06-03 21:43:33] -rw-------. 1 boinc boinc       953 Jun  3 21:40 memory_monitor_summary.json
[2025-06-03 21:43:33] -rw-------. 1 boinc boinc     21080 Jun  3 21:41 log.45006595._050711.job.log.tgz.1
[2025-06-03 21:43:33] -rw-------. 1 boinc boinc        95 Jun  3 21:42 pilot_heartbeat.json
[2025-06-03 21:43:33] -rw-------. 1 boinc boinc      8340 Jun  3 21:43 heartbeat.json
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc        22 Jun  3 21:43 wrapper_checkpoint.txt
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc      8192 Jun  3 21:43 boinc_mmap_file
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc       523 Jun  3 21:43 boinc_task_state.xml
[2025-06-03 21:43:33] -rw-------. 1 boinc boinc      4475 Jun  3 21:43 pilotlog.txt
[2025-06-03 21:43:33] -rw-------. 1 boinc boinc     80850 Jun  3 21:43 log.45006595._050711.job.log.1
[2025-06-03 21:43:33] -rw-------. 1 boinc boinc       188 Jun  3 21:43 output.list
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc       620 Jun  3 21:43 runtime_log
[2025-06-03 21:43:33] -rw-------. 1 boinc boinc    122880 Jun  3 21:43 result.tar.gz
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc      8484 Jun  3 21:43 runtime_log.err
[2025-06-03 21:43:33] -rw-------. 1 boinc boinc       645 Jun  3 21:43 RhzLDmJ3sg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrumKDmbGPDpm.diag
[2025-06-03 21:43:33] -rw-r--r--. 1 boinc boinc     21349 Jun  3 21:43 stderr.txt
[2025-06-03 21:43:33] No HITS result produced
[2025-06-03 21:43:33]  *** Contents of shared directory: ***
[2025-06-03 21:43:33] total 212468
[2025-06-03 21:43:33] -rw-r--r--. 2 boinc boinc 216911482 Jun  3 21:37 ATLAS.root_0
[2025-06-03 21:43:33] -rw-r--r--. 2 boinc boinc     15093 Jun  3 21:37 start_atlas.sh
[2025-06-03 21:43:33] -rw-r--r--. 2 boinc boinc    508881 Jun  3 21:37 input.tar.gz
[2025-06-03 21:43:33] -rw-------. 1 boinc boinc    122880 Jun  3 21:43 result.tar.gz
21:43:35 (1131946): run_atlas exited; CPU time 28.281959
21:43:35 (1131946): called boinc_finish(0)

</stderr_txt>
]]>

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