Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:33:08 (3056470): wrapper (7.7.26015): starting
00:33:08 (3056470): wrapper: running run_atlas (--nthreads 10)
[2025-06-04 00:33:08] Arguments: --nthreads 10
[2025-06-04 00:33:08] Threads: 10
[2025-06-04 00:33:08] Checking for CVMFS
[2025-06-04 00:33:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:33:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:33:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:33:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:33:09] 2.12.6.0 9586 862 143600 146768 3 431 22825722 32935937 13585 16776704 0 4346608 99.592 2921915 31261 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-04 00:33:09] CVMFS is ok
[2025-06-04 00:33:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:33:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:33:09] Further information can be found at the LHC@home message board.
[2025-06-04 00:33:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:33:09] Checking for apptainer binary...
[2025-06-04 00:33:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:33:09] Running /usr/bin/apptainer --version
[2025-06-04 00:33:09] apptainer version 1.4.1-1.el9
[2025-06-04 00:33:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:33:09] c-8-36.aglt2.org
[2025-06-04 00:33:09] apptainer works
[2025-06-04 00:33:09] Set ATHENA_PROC_NUMBER=10
[2025-06-04 00:33:09] Set ATHENA_CORE_NUMBER=10
[2025-06-04 00:33:09] Starting ATLAS job with PandaID=6678213853
[2025-06-04 00:33:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:12:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:12:37]  is_tar=False
[2025-06-04 02:12:37]  lfn=log.45006595._048693.job.log.tgz.1
[2025-06-04 02:12:37]  mtime=0
[2025-06-04 02:12:37]  protocol_id=None
[2025-06-04 02:12:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 02:12:37]  replicas=None
[2025-06-04 02:12:37]  scope=mc23_13p6TeV
[2025-06-04 02:12:37]  status=None
[2025-06-04 02:12:37]  status_code=0
[2025-06-04 02:12:37]  storage_token=
[2025-06-04 02:12:37]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678213853/log.45006595._048693.job.log.tgz.1
[2025-06-04 02:12:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/66/log.45006595._048693.job.log.tgz.1
[2025-06-04 02:12:37]  workdir=None
[2025-06-04 02:12:37] ]
[2025-06-04 02:12:37] 2025-06-04 06:12:11,512 | INFO     | transferring file log.45006595._048693.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678213853/log.45006595._048693.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 02:12:37] 2025-06-04 06:12:11,512 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678213853/log.45006595._048693.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._048693.job
[2025-06-04 02:12:37] 2025-06-04 06:12:11,529 | INFO     | adding to output.list: log.45006595._048693.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c1/66/log.45006595._048693.job.log.tg
[2025-06-04 02:12:37] 2025-06-04 06:12:11,530 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 02:12:37] 2025-06-04 06:12:11,530 | INFO     | summary of transferred files:
[2025-06-04 02:12:37] 2025-06-04 06:12:11,530 | INFO     |  -- lfn=log.45006595._048693.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 02:12:37] 2025-06-04 06:12:11,530 | INFO     | stage-out finished correctly
[2025-06-04 02:12:37] 2025-06-04 06:12:11,784 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 02:12:37] 2025-06-04 06:12:12,325 | INFO     | PID=3060036 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-04 02:12:37] 2025-06-04 06:12:12,325 | INFO     | .. there are 18 such processes running
[2025-06-04 02:12:37] 2025-06-04 06:12:13,556 | WARNING  | process 3068457 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 02:12:37] 2025-06-04 06:12:13,557 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678213853/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:12:37] 2025-06-04 06:12:13,775 | INFO     | number of running child processes to parent process 3068457: 1
[2025-06-04 02:12:37] 2025-06-04 06:12:13,775 | INFO     | maximum number of monitored processes: 6
[2025-06-04 02:12:37] 2025-06-04 06:12:14,645 | INFO     | job 6678213853 has state=finished
[2025-06-04 02:12:37] 2025-06-04 06:12:14,645 | INFO     | preparing for final server update for job 6678213853 in state='finished'
[2025-06-04 02:12:37] 2025-06-04 06:12:14,708 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-04 02:12:37] 2025-06-04 06:12:14,708 | INFO     | this job has now completed (state=finished)
[2025-06-04 02:12:37] 2025-06-04 06:12:14,708 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 02:12:37] 2025-06-04 06:12:14,708 | INFO     | log transfer has been attempted: DONE
[2025-06-04 02:12:37] 2025-06-04 06:12:14,708 | INFO     | job 6678213853 has finished - writing final server update
[2025-06-04 02:12:37] 2025-06-04 06:12:14,709 | INFO     | total number of processed events: 400 (read)
[2025-06-04 02:12:37] 2025-06-04 06:12:14,724 | INFO     | executing command: lscpu
[2025-06-04 02:12:37] 2025-06-04 06:12:14,779 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 02:12:37] 2025-06-04 06:12:16,278 | INFO     | monitor loop #414: job 0:6678213853 is in state 'finished'
[2025-06-04 02:12:37] 2025-06-04 06:12:16,278 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 02:12:37] 2025-06-04 06:12:18,178 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 02:12:37] 2025-06-04 06:12:18,179 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678213853/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 02:12:37] 2025-06-04 06:12:18,179 | INFO     | extracted standard info from prmon json
[2025-06-04 02:12:37] 2025-06-04 06:12:18,180 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:12:37] 2025-06-04 06:12:18,180 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:12:37] 2025-06-04 06:12:18,180 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:12:37] 2025-06-04 06:12:18,180 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:12:37] 2025-06-04 06:12:18,183 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:12:37] 2025-06-04 06:12:18,183 | INFO     | sum of square deviations: 226002356.89999947
[2025-06-04 02:12:37] 2025-06-04 06:12:18,184 | INFO     | sum of deviations: -4304078114.066669
[2025-06-04 02:12:37] 2025-06-04 06:12:18,184 | INFO     | mean x: 1749014645.6333334
[2025-06-04 02:12:37] 2025-06-04 06:12:18,184 | INFO     | mean y: 2365504.422222222
[2025-06-04 02:12:37] 2025-06-04 06:12:18,184 | INFO     | -- intersect: 33311290954.18385
[2025-06-04 02:12:37] 2025-06-04 06:12:18,184 | INFO     | intersect: 33311290954.18385
[2025-06-04 02:12:37] 2025-06-04 06:12:18,185 | INFO     | chi2: 1.1754338333291203
[2025-06-04 02:12:37] 2025-06-04 06:12:18,185 | INFO     | -- intersect: 33311290954.18385
[2025-06-04 02:12:37] 2025-06-04 06:12:18,185 | INFO     | current memory leak: -19.04 B/s (using 90 data points, chi2=1.18)
[2025-06-04 02:12:37] 2025-06-04 06:12:18,186 | INFO     | ..............................
[2025-06-04 02:12:37] 2025-06-04 06:12:18,186 | INFO     | . Timing measurements:
[2025-06-04 02:12:37] 2025-06-04 06:12:18,186 | INFO     | . get job = 0 s
[2025-06-04 02:12:37] 2025-06-04 06:12:18,186 | INFO     | . initial setup = 3 s
[2025-06-04 02:12:37] 2025-06-04 06:12:18,186 | INFO     | . payload setup = 6 s
[2025-06-04 02:12:37] 2025-06-04 06:12:18,186 | INFO     | . stage-in = 0 s
[2025-06-04 02:12:37] 2025-06-04 06:12:18,186 | INFO     | . payload execution = 5905 s
[2025-06-04 02:12:37] 2025-06-04 06:12:18,186 | INFO     | . stage-out = 0 s
[2025-06-04 02:12:37] 2025-06-04 06:12:18,186 | INFO     | . log creation = 0 s
[2025-06-04 02:12:37] 2025-06-04 06:12:18,186 | INFO     | ..............................
[2025-06-04 02:12:37] 2025-06-04 06:12:18,295 | INFO     | 
[2025-06-04 02:12:37] 2025-06-04 06:12:18,295 | INFO     | job summary report
[2025-06-04 02:12:37] 2025-06-04 06:12:18,295 | INFO     | --------------------------------------------------
[2025-06-04 02:12:37] 2025-06-04 06:12:18,295 | INFO     | PanDA job id: 6678213853
[2025-06-04 02:12:37] 2025-06-04 06:12:18,295 | INFO     | task id: 45006595
[2025-06-04 02:12:37] 2025-06-04 06:12:18,295 | INFO     | errors: (none)
[2025-06-04 02:12:37] 2025-06-04 06:12:18,295 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:12:37] 2025-06-04 06:12:18,296 | INFO     | pilot state: finished 
[2025-06-04 02:12:37] 2025-06-04 06:12:18,296 | INFO     | transexitcode: 0
[2025-06-04 02:12:37] 2025-06-04 06:12:18,296 | INFO     | exeerrorcode: 0
[2025-06-04 02:12:37] 2025-06-04 06:12:18,296 | INFO     | exeerrordiag: 
[2025-06-04 02:12:37] 2025-06-04 06:12:18,296 | INFO     | exitcode: 0
[2025-06-04 02:12:37] 2025-06-04 06:12:18,296 | INFO     | exitmsg: OK
[2025-06-04 02:12:37] 2025-06-04 06:12:18,296 | INFO     | cpuconsumptiontime: 42004 s
[2025-06-04 02:12:37] 2025-06-04 06:12:18,296 | INFO     | nevents: 400
[2025-06-04 02:12:37] 2025-06-04 06:12:18,296 | INFO     | neventsw: 0
[2025-06-04 02:12:37] 2025-06-04 06:12:18,296 | INFO     | pid: 3068457
[2025-06-04 02:12:37] 2025-06-04 06:12:18,297 | INFO     | pgrp: 3068457
[2025-06-04 02:12:37] 2025-06-04 06:12:18,297 | INFO     | corecount: 10
[2025-06-04 02:12:37] 2025-06-04 06:12:18,297 | INFO     | event service: False
[2025-06-04 02:12:37] 2025-06-04 06:12:18,297 | INFO     | sizes: {0: 2404962, 1: 2405161, 5: 2405367, 12: 2405423, 5915: 2432138, 5916: 2441079, 5917: 2441263, 5923: 2441433}
[2025-06-04 02:12:37] 2025-06-04 06:12:18,297 | INFO     | --------------------------------------------------
[2025-06-04 02:12:37] 2025-06-04 06:12:18,297 | INFO     | 
[2025-06-04 02:12:37] 2025-06-04 06:12:18,297 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:12:37] 2025-06-04 06:12:18,316 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,317 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,317 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,317 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,317 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,317 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,317 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,317 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,318 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,318 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,318 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,318 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,318 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,318 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,318 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,318 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:12:37] 2025-06-04 06:12:18,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,319 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:12:37] 2025-06-04 06:12:18,319 | INFO     | job 6678213853 has completed (purged errors)
[2025-06-04 02:12:37] 2025-06-04 06:12:18,319 | INFO     | overall cleanup function is called
[2025-06-04 02:12:37] 2025-06-04 06:12:19,327 | INFO     | --- collectZombieJob: --- 10, [3068457]
[2025-06-04 02:12:37] 2025-06-04 06:12:19,327 | INFO     | zombie collector waiting for pid 3068457
[2025-06-04 02:12:37] 2025-06-04 06:12:19,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:12:37] 2025-06-04 06:12:19,327 | INFO     | collected zombie processes
[2025-06-04 02:12:37] 2025-06-04 06:12:19,327 | INFO     | will attempt to kill all subprocesses of pid=3068457
[2025-06-04 02:12:37] 2025-06-04 06:12:19,662 | INFO     | process IDs to be killed: [3068457] (in reverse order)
[2025-06-04 02:12:37] 2025-06-04 06:12:19,760 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:12:37] 2025-06-04 06:12:19,760 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:12:37] 2025-06-04 06:12:19,773 | INFO     | did not find any defunct processes belonging to 3068457
[2025-06-04 02:12:37] 2025-06-04 06:12:19,786 | INFO     | did not find any defunct processes belonging to 3068457
[2025-06-04 02:12:37] 2025-06-04 06:12:19,786 | INFO     | ready for new job
[2025-06-04 02:12:37] 2025-06-04 06:12:19,787 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:12:37] 2025-06-04 06:12:19,788 | INFO     | **************************************
[2025-06-04 02:12:37] 2025-06-04 06:12:19,788 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:12:37] 2025-06-04 06:12:19,788 | INFO     | **************************************
[2025-06-04 02:12:37] 2025-06-04 06:12:19,788 | INFO     | 
[2025-06-04 02:12:37] 2025-06-04 06:12:19,802 | INFO     | architecture information:
[2025-06-04 02:12:37] 2025-06-04 06:12:19,803 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:12:37] 2025-06-04 06:12:19,818 | INFO     | cat /etc/os-release:
[2025-06-04 02:12:37] NAME="CentOS Linux"
[2025-06-04 02:12:37] VERSION="7 (Core)"
[2025-06-04 02:12:37] ID="centos"
[2025-06-04 02:12:37] ID_LIKE="rhel fedora"
[2025-06-04 02:12:37] VERSION_ID="7"
[2025-06-04 02:12:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:12:37] ANSI_COLOR="0;31"
[2025-06-04 02:12:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:12:37] HOME_URL="https://www.centos.org/"
[2025-06-04 02:12:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:12:37] 
[2025-06-04 02:12:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:12:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:12:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:12:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:12:37] 
[2025-06-04 02:12:37] 2025-06-04 06:12:19,818 | INFO     | **************************************
[2025-06-04 02:12:37] 2025-06-04 06:12:20,321 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:12:37] 2025-06-04 06:12:20,338 | INFO     | sufficient remaining disk space (76581699584 B)
[2025-06-04 02:12:37] 2025-06-04 06:12:20,338 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:12:37] 2025-06-04 06:12:20,338 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:12:37] 2025-06-04 06:12:20,338 | INFO     | update_server=False
[2025-06-04 02:12:37] 2025-06-04 06:12:20,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:12:37] 2025-06-04 06:12:20,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:12:37] 2025-06-04 06:12:20,339 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:12:37] 2025-06-04 06:12:20,339 | INFO     | aborting loop
[2025-06-04 02:12:37] 2025-06-04 06:12:20,346 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:12:37] 2025-06-04 06:12:20,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:12:37] 2025-06-04 06:12:20,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:12:37] 2025-06-04 06:12:20,886 | INFO     | all payload control threads have been joined
[2025-06-04 02:12:37] 2025-06-04 06:12:21,240 | INFO     | all data control threads have been joined
[2025-06-04 02:12:37] 2025-06-04 06:12:21,344 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:21,345 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:21,534 | INFO     | all job control threads have been joined
[2025-06-04 02:12:37] 2025-06-04 06:12:21,633 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:21,892 | INFO     | [payload] control thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:21,898 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:21,921 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:21,962 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:22,072 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:22,246 | INFO     | [data] control thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:22,345 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:22,362 | INFO     | [job] validate thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:22,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:12:37] 2025-06-04 06:12:22,537 | INFO     | [job] control thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:22,783 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:23,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:12:37] 2025-06-04 06:12:24,310 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:26,405 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:30,486 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:12:37] 2025-06-04 06:12:31,492 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:12:37] 2025-06-04 06:12:31,791 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651455469376)>', '<ExcThread(monitor, started 139650970666752)>']
[2025-06-04 02:12:37] 2025-06-04 06:12:32,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:12:37] 2025-06-04 06:12:32,406 | INFO     | [monitor] control thread has ended
[2025-06-04 02:12:37] 2025-06-04 06:12:36,814 | INFO     | all workflow threads have been joined
[2025-06-04 02:12:37] 2025-06-04 06:12:36,815 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:12:37] 2025-06-04 06:12:36,815 | INFO     | traces error code: 0
[2025-06-04 02:12:37] 2025-06-04 06:12:36,815 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:12:37] 2025-06-04 06:12:36,974 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:12:37] 2025-06-04 06:12:36,977 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:12:37] 2025-06-04 06:12:36,980 [wrapper] pilotpid: 3060036
[2025-06-04 02:12:37] 2025-06-04 06:12:36,982 [wrapper] Pilot exit status: 0
[2025-06-04 02:12:37] 2025-06-04 06:12:36,991 [wrapper] pandaids: 6678213853
[2025-06-04 02:12:37] 2025-06-04 06:12:37,055 [wrapper] cleanup supervisor_pilot 3415910 3060037
[2025-06-04 02:12:37] 2025-06-04 06:12:37,058 [wrapper] Test setup, not cleaning
[2025-06-04 02:12:37] 2025-06-04 06:12:37,060 [wrapper] apfmon messages muted
[2025-06-04 02:12:37] 2025-06-04 06:12:37,063 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:12:37] 2025-06-04 06:12:37,065 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:12:37]  *** Error codes and diagnostics ***
[2025-06-04 02:12:37]     "exeErrorCode": 0,
[2025-06-04 02:12:37]     "exeErrorDiag": "",
[2025-06-04 02:12:37]     "pilotErrorCode": 0,
[2025-06-04 02:12:37]     "pilotErrorDiag": "",
[2025-06-04 02:12:37]  *** Listing of results directory ***
[2025-06-04 02:12:37] total 394440
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas    495897 Jun  3 19:53 pilot3.tar.gz
[2025-06-04 02:12:37] -rwx------. 1 boincer umatlas     37140 Jun  3 19:55 runpilot2-wrapper.sh
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas      5111 Jun  3 19:55 queuedata.json
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas       100 Jun  4 00:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:12:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  4 00:33 run_atlas
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas       105 Jun  4 00:33 job.xml
[2025-06-04 02:12:37] -rw-r--r--. 2 boincer umatlas 216442626 Jun  4 00:33 EVNT.45006593._001953.pool.root.1
[2025-06-04 02:12:37] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:33 start_atlas.sh
[2025-06-04 02:12:37] drwxrwx--x. 2 boincer umatlas      4096 Jun  4 00:33 shared
[2025-06-04 02:12:37] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 00:33 input.tar.gz
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas         0 Jun  4 00:33 boinc_lockfile
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas      2524 Jun  4 00:33 pandaJob.out
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas    986745 Jun  4 00:33 agis_schedconf.cvmfs.json
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas   1603667 Jun  4 00:33 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:12:37] drwx------. 4 boincer umatlas      4096 Jun  4 00:33 pilot3
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas      6658 Jun  4 02:00 init_data.xml
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas        95 Jun  4 02:11 pilot_heartbeat.json
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas 181805317 Jun  4 02:11 HITS.45006595._048693.pool.root.1
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas       529 Jun  4 02:11 boinc_task_state.xml
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas      1040 Jun  4 02:12 memory_monitor_summary.json
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas    350726 Jun  4 02:12 log.45006595._048693.job.log.tgz.1
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas      7712 Jun  4 02:12 heartbeat.json
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas        27 Jun  4 02:12 wrapper_checkpoint.txt
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas      8192 Jun  4 02:12 boinc_mmap_file
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas      4425 Jun  4 02:12 pilotlog.txt
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas    559358 Jun  4 02:12 log.45006595._048693.job.log.1
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas       357 Jun  4 02:12 output.list
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas       620 Jun  4 02:12 runtime_log
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas    931840 Jun  4 02:12 result.tar.gz
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas       651 Jun  4 02:12 WqcNDmXeqg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmzKaKDm0pBiPn.diag
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas      8651 Jun  4 02:12 runtime_log.err
[2025-06-04 02:12:37] -rw-r--r--. 1 boincer umatlas     21572 Jun  4 02:12 stderr.txt
[2025-06-04 02:12:37] HITS file was successfully produced:
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas 181805317 Jun  4 02:11 shared/HITS.pool.root.1
[2025-06-04 02:12:37]  *** Contents of shared directory: ***
[2025-06-04 02:12:37] total 390352
[2025-06-04 02:12:37] -rw-r--r--. 2 boincer umatlas 216442626 Jun  4 00:33 ATLAS.root_0
[2025-06-04 02:12:37] -rw-r--r--. 2 boincer umatlas     15093 Jun  4 00:33 start_atlas.sh
[2025-06-04 02:12:37] -rw-r--r--. 2 boincer umatlas    508878 Jun  4 00:33 input.tar.gz
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas 181805317 Jun  4 02:11 HITS.pool.root.1
[2025-06-04 02:12:37] -rw-------. 1 boincer umatlas    931840 Jun  4 02:12 result.tar.gz
02:12:38 (3056470): run_atlas exited; CPU time 42153.369573
02:12:38 (3056470): called boinc_finish(0)

</stderr_txt>
]]>

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