Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:13:50 (22862): wrapper (7.7.26015): starting
14:13:50 (22862): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 14:13:50] Arguments: --nthreads 8
[2025-06-04 14:13:50] Threads: 8
[2025-06-04 14:13:50] Checking for CVMFS
[2025-06-04 14:13:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 14:13:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 14:13:52] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 14:13:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 14:13:53] 2.11.2.0 21021 33306 93536 146779 1 213 18724116 25165825 3519 130560 0 16653091 99.851 18622982 2443 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 14:13:53] CVMFS is ok
[2025-06-04 14:13:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:13:53] Checking for apptainer binary...
[2025-06-04 14:13:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 14:13:53] Running /usr/bin/apptainer --version
[2025-06-04 14:13:54] apptainer version 1.3.2-1.el7
[2025-06-04 14:13:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:15:26] cg-vwn448.simple-grid.lan
[2025-06-04 14:15:26] apptainer works
[2025-06-04 14:15:26] Set ATHENA_PROC_NUMBER=8
[2025-06-04 14:15:26] Set ATHENA_CORE_NUMBER=8
[2025-06-04 14:15:26] Starting ATLAS job with PandaID=6678213852
[2025-06-04 14:15:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/25 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 18:18:22]  *** The last 200 lines of the pilot log: ***
[2025-06-04 18:18:22] 2025-06-04 16:18:04,998 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 18:18:22] 2025-06-04 16:18:04,998 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 18:18:22] 2025-06-04 16:18:04,998 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 18:18:22] 2025-06-04 16:18:04,998 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 18:18:22] 2025-06-04 16:18:05,003 | INFO     | fitting pss+swap vs Time
[2025-06-04 18:18:22] 2025-06-04 16:18:05,004 | INFO     | sum of square deviations: 3627000098.0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,006 | INFO     | sum of deviations: -3779366325.000004
[2025-06-04 18:18:22] 2025-06-04 16:18:05,013 | INFO     | mean x: 1749046882.0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,014 | INFO     | mean y: 2470156.7621145374
[2025-06-04 18:18:22] 2025-06-04 16:18:05,014 | INFO     | -- intersect: 1824992546.6352496
[2025-06-04 18:18:22] 2025-06-04 16:18:05,014 | INFO     | intersect: 1824992546.6352496
[2025-06-04 18:18:22] 2025-06-04 16:18:05,015 | INFO     | chi2: 6.519624342840145
[2025-06-04 18:18:22] 2025-06-04 16:18:05,015 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 18:18:22] 2025-06-04 16:18:05,017 | INFO     | sum of deviations: 27870133901.0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,017 | INFO     | mean x: 1749046729.5
[2025-06-04 18:18:22] 2025-06-04 16:18:05,018 | INFO     | mean y: 2490473.2972972975
[2025-06-04 18:18:22] 2025-06-04 16:18:05,018 | INFO     | -- intersect: -14366026086.616245
[2025-06-04 18:18:22] 2025-06-04 16:18:05,018 | INFO     | intersect: -14366026086.616245
[2025-06-04 18:18:22] 2025-06-04 16:18:05,018 | INFO     | chi2: 4.882506827520457
[2025-06-04 18:18:22] 2025-06-04 16:18:05,018 | INFO     | current chi2=4.882506827520457 (change=25.110611121598925 %)
[2025-06-04 18:18:22] 2025-06-04 16:18:05,019 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,021 | INFO     | sum of deviations: 27671861513.999996
[2025-06-04 18:18:22] 2025-06-04 16:18:05,021 | INFO     | mean x: 1749046577.0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,021 | INFO     | mean y: 2490338.35483871
[2025-06-04 18:18:22] 2025-06-04 16:18:05,021 | INFO     | -- intersect: -15272865920.2465
[2025-06-04 18:18:22] 2025-06-04 16:18:05,021 | INFO     | intersect: -15272865920.2465
[2025-06-04 18:18:22] 2025-06-04 16:18:05,021 | INFO     | chi2: 4.888403217023931
[2025-06-04 18:18:22] 2025-06-04 16:18:05,022 | INFO     | current chi2=4.888403217023931 (change=-0.12076561716695552 %)
[2025-06-04 18:18:22] 2025-06-04 16:18:05,022 | INFO     | right removable region: 216
[2025-06-04 18:18:22] 2025-06-04 16:18:05,022 | INFO     | sum of square deviations: 3392567795.5
[2025-06-04 18:18:22] 2025-06-04 16:18:05,024 | INFO     | sum of deviations: -76876546555.00002
[2025-06-04 18:18:22] 2025-06-04 16:18:05,024 | INFO     | mean x: 1749047034.5
[2025-06-04 18:18:22] 2025-06-04 16:18:05,024 | INFO     | mean y: 2517621.8558558556
[2025-06-04 18:18:22] 2025-06-04 16:18:05,025 | INFO     | -- intersect: 39636418513.38013
[2025-06-04 18:18:22] 2025-06-04 16:18:05,025 | INFO     | intersect: 39636418513.38013
[2025-06-04 18:18:22] 2025-06-04 16:18:05,025 | INFO     | chi2: 2.4771898166784565
[2025-06-04 18:18:22] 2025-06-04 16:18:05,025 | INFO     | current chi2=2.4771898166784565 (change=62.004101978683664 %)
[2025-06-04 18:18:22] 2025-06-04 16:18:05,026 | INFO     | sum of square deviations: 3168461268.0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,027 | INFO     | sum of deviations: -95070553260.00002
[2025-06-04 18:18:22] 2025-06-04 16:18:05,028 | INFO     | mean x: 1749047187.0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,028 | INFO     | mean y: 2529881.3870967743
[2025-06-04 18:18:22] 2025-06-04 16:18:05,028 | INFO     | -- intersect: 52483172591.246704
[2025-06-04 18:18:22] 2025-06-04 16:18:05,028 | INFO     | intersect: 52483172591.246704
[2025-06-04 18:18:22] 2025-06-04 16:18:05,028 | INFO     | chi2: 2.0071714041490876
[2025-06-04 18:18:22] 2025-06-04 16:18:05,029 | INFO     | current chi2=2.0071714041490876 (change=18.9738553487029 %)
[2025-06-04 18:18:22] 2025-06-04 16:18:05,029 | INFO     | left removable region: 20
[2025-06-04 18:18:22] 2025-06-04 16:18:05,029 | INFO     | sum of square deviations: 2334722845.0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,030 | INFO     | sum of deviations: -52033821121.0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,031 | INFO     | mean x: 1749047156.5
[2025-06-04 18:18:22] 2025-06-04 16:18:05,031 | INFO     | mean y: 2547123.3469387754
[2025-06-04 18:18:22] 2025-06-04 16:18:05,031 | INFO     | -- intersect: 38983451031.67131
[2025-06-04 18:18:22] 2025-06-04 16:18:05,031 | INFO     | intersect: 38983451031.67131
[2025-06-04 18:18:22] 2025-06-04 16:18:05,031 | INFO     | chi2: 0.20813839334995923
[2025-06-04 18:18:22] 2025-06-04 16:18:05,032 | INFO     | -- intersect: 38983451031.67131
[2025-06-04 18:18:22] 2025-06-04 16:18:05,032 | INFO     | current memory leak: -22.29 B/s (using 196 data points, chi2=0.21)
[2025-06-04 18:18:22] 2025-06-04 16:18:05,033 | INFO     | ..............................
[2025-06-04 18:18:22] 2025-06-04 16:18:05,033 | INFO     | . Timing measurements:
[2025-06-04 18:18:22] 2025-06-04 16:18:05,033 | INFO     | . get job = 0 s
[2025-06-04 18:18:22] 2025-06-04 16:18:05,033 | INFO     | . initial setup = 6 s
[2025-06-04 18:18:22] 2025-06-04 16:18:05,033 | INFO     | . payload setup = 148 s
[2025-06-04 18:18:22] 2025-06-04 16:18:05,033 | INFO     | . stage-in = 0 s
[2025-06-04 18:18:22] 2025-06-04 16:18:05,033 | INFO     | . payload execution = 13942 s
[2025-06-04 18:18:22] 2025-06-04 16:18:05,033 | INFO     | . stage-out = 3 s
[2025-06-04 18:18:22] 2025-06-04 16:18:05,033 | INFO     | . log creation = 1 s
[2025-06-04 18:18:22] 2025-06-04 16:18:05,033 | INFO     | ..............................
[2025-06-04 18:18:22] 2025-06-04 16:18:05,167 | INFO     | 
[2025-06-04 18:18:22] 2025-06-04 16:18:05,168 | INFO     | job summary report
[2025-06-04 18:18:22] 2025-06-04 16:18:05,168 | INFO     | --------------------------------------------------
[2025-06-04 18:18:22] 2025-06-04 16:18:05,168 | INFO     | PanDA job id: 6678213852
[2025-06-04 18:18:22] 2025-06-04 16:18:05,168 | INFO     | task id: 45006595
[2025-06-04 18:18:22] 2025-06-04 16:18:05,168 | INFO     | errors: (none)
[2025-06-04 18:18:22] 2025-06-04 16:18:05,168 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 18:18:22] 2025-06-04 16:18:05,168 | INFO     | pilot state: finished 
[2025-06-04 18:18:22] 2025-06-04 16:18:05,168 | INFO     | transexitcode: 0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,168 | INFO     | exeerrorcode: 0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,169 | INFO     | exeerrordiag: 
[2025-06-04 18:18:22] 2025-06-04 16:18:05,169 | INFO     | exitcode: 0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,169 | INFO     | exitmsg: OK
[2025-06-04 18:18:22] 2025-06-04 16:18:05,169 | INFO     | cpuconsumptiontime: 49886 s
[2025-06-04 18:18:22] 2025-06-04 16:18:05,169 | INFO     | nevents: 400
[2025-06-04 18:18:22] 2025-06-04 16:18:05,169 | INFO     | neventsw: 0
[2025-06-04 18:18:22] 2025-06-04 16:18:05,169 | INFO     | pid: 6755
[2025-06-04 18:18:22] 2025-06-04 16:18:05,169 | INFO     | pgrp: 6755
[2025-06-04 18:18:22] 2025-06-04 16:18:05,169 | INFO     | corecount: 8
[2025-06-04 18:18:22] 2025-06-04 16:18:05,169 | INFO     | event service: False
[2025-06-04 18:18:22] 2025-06-04 16:18:05,170 | INFO     | sizes: {0: 2397172, 1: 2397371, 12: 2397371, 23: 2397399, 34: 2397427, 44: 2397455, 55: 2397611, 66: 2397639, 76: 2397667, 84: 2397929, 87: 2397957, 14096: 2427976
[2025-06-04 18:18:22] 2025-06-04 16:18:05,170 | INFO     | --------------------------------------------------
[2025-06-04 18:18:22] 2025-06-04 16:18:05,170 | INFO     | 
[2025-06-04 18:18:22] 2025-06-04 16:18:05,170 | INFO     | executing command: ls -lF /var/lib/boinc/slots/25
[2025-06-04 18:18:22] 2025-06-04 16:18:05,332 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,333 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,333 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,333 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,333 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,333 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,333 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,334 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,334 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,334 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 18:18:22] 2025-06-04 16:18:05,334 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,334 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 18:18:22] 2025-06-04 16:18:05,335 | INFO     | job 6678213852 has completed (purged errors)
[2025-06-04 18:18:22] 2025-06-04 16:18:05,335 | INFO     | overall cleanup function is called
[2025-06-04 18:18:22] 2025-06-04 16:18:06,350 | INFO     | --- collectZombieJob: --- 10, [6755]
[2025-06-04 18:18:22] 2025-06-04 16:18:06,350 | INFO     | zombie collector waiting for pid 6755
[2025-06-04 18:18:22] 2025-06-04 16:18:06,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 18:18:22] 2025-06-04 16:18:06,350 | INFO     | collected zombie processes
[2025-06-04 18:18:22] 2025-06-04 16:18:06,350 | INFO     | will attempt to kill all subprocesses of pid=6755
[2025-06-04 18:18:22] 2025-06-04 16:18:06,460 | INFO     | process IDs to be killed: [6755] (in reverse order)
[2025-06-04 18:18:22] 2025-06-04 16:18:06,557 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 18:18:22] 2025-06-04 16:18:06,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 18:18:22] 2025-06-04 16:18:06,562 | INFO     | did not find any defunct processes belonging to 6755
[2025-06-04 18:18:22] 2025-06-04 16:18:06,565 | INFO     | did not find any defunct processes belonging to 6755
[2025-06-04 18:18:22] 2025-06-04 16:18:06,566 | INFO     | ready for new job
[2025-06-04 18:18:22] 2025-06-04 16:18:06,566 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 18:18:22] 2025-06-04 16:18:06,568 | INFO     | **************************************
[2025-06-04 18:18:22] 2025-06-04 16:18:06,569 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 18:18:22] 2025-06-04 16:18:06,569 | INFO     | **************************************
[2025-06-04 18:18:22] 2025-06-04 16:18:06,569 | INFO     | 
[2025-06-04 18:18:22] 2025-06-04 16:18:06,570 | INFO     | pilot is running in a VM
[2025-06-04 18:18:22] 2025-06-04 16:18:06,570 | INFO     | architecture information:
[2025-06-04 18:18:22] 2025-06-04 16:18:06,570 | INFO     | executing command: cat /etc/os-release
[2025-06-04 18:18:22] 2025-06-04 16:18:06,751 | INFO     | cat /etc/os-release:
[2025-06-04 18:18:22] NAME="CentOS Linux"
[2025-06-04 18:18:22] VERSION="7 (Core)"
[2025-06-04 18:18:22] ID="centos"
[2025-06-04 18:18:22] ID_LIKE="rhel fedora"
[2025-06-04 18:18:22] VERSION_ID="7"
[2025-06-04 18:18:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 18:18:22] ANSI_COLOR="0;31"
[2025-06-04 18:18:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 18:18:22] HOME_URL="https://www.centos.org/"
[2025-06-04 18:18:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 18:18:22] 
[2025-06-04 18:18:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 18:18:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 18:18:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 18:18:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 18:18:22] 
[2025-06-04 18:18:22] 2025-06-04 16:18:06,752 | INFO     | **************************************
[2025-06-04 18:18:22] 2025-06-04 16:18:07,256 | INFO     | executing command: df -mP /var/lib/boinc/slots/25
[2025-06-04 18:18:22] 2025-06-04 16:18:07,558 | INFO     | sufficient remaining disk space (496727228416 B)
[2025-06-04 18:18:22] 2025-06-04 16:18:07,558 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 18:18:22] 2025-06-04 16:18:07,558 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 18:18:22] 2025-06-04 16:18:07,558 | INFO     | update_server=False
[2025-06-04 18:18:22] 2025-06-04 16:18:07,559 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 18:18:22] 2025-06-04 16:18:07,658 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 18:18:22] 2025-06-04 16:18:07,659 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 18:18:22] 2025-06-04 16:18:07,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:18:22] 2025-06-04 16:18:07,659 | INFO     | will abort loop
[2025-06-04 18:18:22] 2025-06-04 16:18:07,894 | INFO     | all job control threads have been joined
[2025-06-04 18:18:22] 2025-06-04 16:18:08,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 18:18:22] 2025-06-04 16:18:08,355 | INFO     | all payload control threads have been joined
[2025-06-04 18:18:22] 2025-06-04 16:18:08,449 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 18:18:22] 2025-06-04 16:18:08,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 18:18:22] 2025-06-04 16:18:08,449 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 18:18:22] 2025-06-04 16:18:08,564 | INFO     | [job] retrieve thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:08,627 | INFO     | all data control threads have been joined
[2025-06-04 18:18:22] 2025-06-04 16:18:08,664 | INFO     | [job] job monitor thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:08,731 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:08,899 | INFO     | [job] control thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:08,956 | INFO     | [payload] failed_post thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:09,080 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:09,175 | INFO     | [data] copytool_in thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:09,361 | INFO     | [payload] control thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:09,619 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:09,633 | INFO     | [data] control thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:09,655 | INFO     | [payload] validate_post thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:09,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:09,892 | INFO     | [job] validate thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:10,186 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 18:18:22] 2025-06-04 16:18:10,235 | INFO     | [data] copytool_out thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:10,296 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 18:18:22] 2025-06-04 16:18:11,192 | INFO     | [job] queue monitor thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:14,305 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 18:18:22] 2025-06-04 16:18:15,153 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140008403908416)>', '<ExcThread(monitor, started 140007738173184)>']
[2025-06-04 18:18:22] 2025-06-04 16:18:15,491 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 18:18:22] 2025-06-04 16:18:15,491 | INFO     | [monitor] control thread has ended
[2025-06-04 18:18:22] 2025-06-04 16:18:20,179 | INFO     | all workflow threads have been joined
[2025-06-04 18:18:22] 2025-06-04 16:18:20,179 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 18:18:22] 2025-06-04 16:18:20,179 | INFO     | traces error code: 0
[2025-06-04 18:18:22] 2025-06-04 16:18:20,180 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 18:18:22] 2025-06-04 16:18:20,565 [wrapper] ==== pilot stdout END ====
[2025-06-04 18:18:22] 2025-06-04 16:18:20,667 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 18:18:22] 2025-06-04 16:18:20,696 [wrapper] pilotpid: 28561
[2025-06-04 18:18:22] 2025-06-04 16:18:20,739 [wrapper] Pilot exit status: 0
[2025-06-04 18:18:22] 2025-06-04 16:18:21,200 [wrapper] pandaids: 6678213852
[2025-06-04 18:18:22] 2025-06-04 16:18:21,317 [wrapper] cleanup supervisor_pilot 21774 28562
[2025-06-04 18:18:22] 2025-06-04 16:18:21,361 [wrapper] Test setup, not cleaning
[2025-06-04 18:18:22] 2025-06-04 16:18:21,398 [wrapper] apfmon messages muted
[2025-06-04 18:18:22] 2025-06-04 16:18:21,432 [wrapper] ==== wrapper stdout END ====
[2025-06-04 18:18:22] 2025-06-04 16:18:21,455 [wrapper] ==== wrapper stderr END ====
[2025-06-04 18:18:22]  *** Error codes and diagnostics ***
[2025-06-04 18:18:22]     "exeErrorCode": 0,
[2025-06-04 18:18:22]     "exeErrorDiag": "",
[2025-06-04 18:18:22]     "pilotErrorCode": 0,
[2025-06-04 18:18:22]     "pilotErrorDiag": "",
[2025-06-04 18:18:22]  *** Listing of results directory ***
[2025-06-04 18:18:22] total 390772
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc    495897 Jun  4 01:53 pilot3.tar.gz
[2025-06-04 18:18:22] -rwx------. 1 boinc boinc     37140 Jun  4 01:57 runpilot2-wrapper.sh
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc      5111 Jun  4 01:57 queuedata.json
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc       100 Jun  4 14:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 18:18:22] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 14:13 run_atlas
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc       105 Jun  4 14:13 job.xml
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc      6393 Jun  4 14:13 init_data.xml
[2025-06-04 18:18:22] -rw-r--r--. 2 boinc boinc 216442626 Jun  4 14:13 EVNT.45006593._001953.pool.root.1
[2025-06-04 18:18:22] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:13 start_atlas.sh
[2025-06-04 18:18:22] drwxrwx--x. 2 boinc boinc        68 Jun  4 14:13 shared
[2025-06-04 18:18:22] -rw-r--r--. 2 boinc boinc    508878 Jun  4 14:13 input.tar.gz
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc         0 Jun  4 14:13 boinc_lockfile
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc      2525 Jun  4 14:15 pandaJob.out
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc    986811 Jun  4 14:18 agis_schedconf.cvmfs.json
[2025-06-04 18:18:22] drwx------. 4 boinc boinc      4096 Jun  4 14:18 pilot3
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc 176657606 Jun  4 18:15 HITS.45006595._048692.pool.root.1
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc       531 Jun  4 18:15 boinc_task_state.xml
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc      1017 Jun  4 18:16 memory_monitor_summary.json
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc   1598969 Jun  4 18:16 agis_ddmendpoints.agis.ALL.json
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc    387351 Jun  4 18:16 log.45006595._048692.job.log.tgz.1
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc        95 Jun  4 18:17 pilot_heartbeat.json
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc      7699 Jun  4 18:18 heartbeat.json
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc      8192 Jun  4 18:18 boinc_mmap_file
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc        28 Jun  4 18:18 wrapper_checkpoint.txt
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc      4603 Jun  4 18:18 pilotlog.txt
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc   1228773 Jun  4 18:18 log.45006595._048692.job.log.1
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc       357 Jun  4 18:18 output.list
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc       620 Jun  4 18:18 runtime_log
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc   1638400 Jun  4 18:18 result.tar.gz
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc      8673 Jun  4 18:18 runtime_log.err
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc       657 Jun  4 18:18 ig6LDmvgqg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZLaKDmxzCiRo.diag
[2025-06-04 18:18:22] -rw-r--r--. 1 boinc boinc     20495 Jun  4 18:18 stderr.txt
[2025-06-04 18:18:22] HITS file was successfully produced:
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc 176657606 Jun  4 18:15 shared/HITS.pool.root.1
[2025-06-04 18:18:22]  *** Contents of shared directory: ***
[2025-06-04 18:18:22] total 386008
[2025-06-04 18:18:22] -rw-r--r--. 2 boinc boinc 216442626 Jun  4 14:13 ATLAS.root_0
[2025-06-04 18:18:22] -rw-r--r--. 2 boinc boinc     15093 Jun  4 14:13 start_atlas.sh
[2025-06-04 18:18:22] -rw-r--r--. 2 boinc boinc    508878 Jun  4 14:13 input.tar.gz
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc 176657606 Jun  4 18:15 HITS.pool.root.1
[2025-06-04 18:18:22] -rw-------. 1 boinc boinc   1638400 Jun  4 18:18 result.tar.gz
18:18:23 (22862): run_atlas exited; CPU time 50084.390351
18:18:23 (22862): called boinc_finish(0)

</stderr_txt>
]]>

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