Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:44:05 (966503): wrapper (7.7.26015): starting
20:44:05 (966503): wrapper: running run_atlas (--nthreads 4)
[2025-06-05 20:44:05] Arguments: --nthreads 4
[2025-06-05 20:44:05] Threads: 4
[2025-06-05 20:44:05] Checking for CVMFS
[2025-06-05 20:44:05] No cvmfs_config command found, will try listing directly
[2025-06-05 20:44:05] CVMFS is ok
[2025-06-05 20:44:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-05 20:44:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-05 20:44:05] Further information can be found at the LHC@home message board.
[2025-06-05 20:44:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-05 20:44:05] Checking for apptainer binary...
[2025-06-05 20:44:05] which: no apptainer in ((null))
[2025-06-05 20:44:05] apptainer is not installed, using version from CVMFS
[2025-06-05 20:44:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-05 20:44:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-06-05 20:44:05] apptainer works
[2025-06-05 20:44:05] Set ATHENA_PROC_NUMBER=4
[2025-06-05 20:44:05] Set ATHENA_CORE_NUMBER=4
[2025-06-05 20:44:05] Starting ATLAS job with PandaID=6678156089
[2025-06-05 20:44:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 23:06:43]  *** The last 200 lines of the pilot log: ***
[2025-06-05 23:06:43] 2025-06-05 21:05:09,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 23:06:43] 2025-06-05 21:05:12,190 | INFO     | monitor loop #589: job 0:6678156089 is in state 'finished'
[2025-06-05 23:06:43] 2025-06-05 21:05:12,190 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 23:06:43] 2025-06-05 21:05:14,693 | INFO     | monitor loop #590: job 0:6678156089 is in state 'finished'
[2025-06-05 23:06:43] 2025-06-05 21:05:14,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 23:06:43] 2025-06-05 21:05:15,427 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 23:06:43] 2025-06-05 21:05:15,428 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6678156089/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 23:06:43] 2025-06-05 21:05:15,429 | INFO     | extracted standard info from prmon json
[2025-06-05 23:06:43] 2025-06-05 21:05:15,429 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 23:06:43] 2025-06-05 21:05:15,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 23:06:43] 2025-06-05 21:05:15,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 23:06:43] 2025-06-05 21:05:15,429 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 23:06:43] 2025-06-05 21:05:15,432 | INFO     | fitting pss+swap vs Time
[2025-06-05 23:06:43] 2025-06-05 21:05:15,432 | INFO     | sum of square deviations: 814878534.5
[2025-06-05 23:06:43] 2025-06-05 21:05:15,433 | INFO     | sum of deviations: 17323439745.5
[2025-06-05 23:06:43] 2025-06-05 21:05:15,433 | INFO     | mean x: 1749153273.5
[2025-06-05 23:06:43] 2025-06-05 21:05:15,433 | INFO     | mean y: 2298857.384057971
[2025-06-05 23:06:43] 2025-06-05 21:05:15,433 | INFO     | -- intersect: -37182815311.45816
[2025-06-05 23:06:43] 2025-06-05 21:05:15,433 | INFO     | intersect: -37182815311.45816
[2025-06-05 23:06:43] 2025-06-05 21:05:15,433 | INFO     | chi2: 1.5929356509555974
[2025-06-05 23:06:43] 2025-06-05 21:05:15,434 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 23:06:43] 2025-06-05 21:05:15,434 | INFO     | sum of deviations: 16671161042.000006
[2025-06-05 23:06:43] 2025-06-05 21:05:15,434 | INFO     | mean x: 1749153121.0
[2025-06-05 23:06:43] 2025-06-05 21:05:15,434 | INFO     | mean y: 2297692.2406015038
[2025-06-05 23:06:43] 2025-06-05 21:05:15,435 | INFO     | -- intersect: -39972371787.12411
[2025-06-05 23:06:43] 2025-06-05 21:05:15,435 | INFO     | intersect: -39972371787.12411
[2025-06-05 23:06:43] 2025-06-05 21:05:15,435 | INFO     | chi2: 1.595136539798717
[2025-06-05 23:06:43] 2025-06-05 21:05:15,435 | INFO     | current chi2=1.595136539798717 (change=-0.1381655838890431 %)
[2025-06-05 23:06:43] 2025-06-05 21:05:15,435 | INFO     | right removable region: 132
[2025-06-05 23:06:43] 2025-06-05 21:05:15,435 | INFO     | sum of square deviations: 729472282.0
[2025-06-05 23:06:43] 2025-06-05 21:05:15,436 | INFO     | sum of deviations: -3509935791.0000005
[2025-06-05 23:06:43] 2025-06-05 21:05:15,436 | INFO     | mean x: 1749153426.0
[2025-06-05 23:06:43] 2025-06-05 21:05:15,436 | INFO     | mean y: 2335472.007518797
[2025-06-05 23:06:43] 2025-06-05 21:05:15,436 | INFO     | -- intersect: 8418578782.905068
[2025-06-05 23:06:43] 2025-06-05 21:05:15,436 | INFO     | intersect: 8418578782.905068
[2025-06-05 23:06:43] 2025-06-05 21:05:15,436 | INFO     | chi2: 0.007132196815619093
[2025-06-05 23:06:43] 2025-06-05 21:05:15,436 | INFO     | current chi2=0.007132196815619093 (change=99.55226083292564 %)
[2025-06-05 23:06:43] 2025-06-05 21:05:15,437 | INFO     | sum of square deviations: 650252192.0
[2025-06-05 23:06:43] 2025-06-05 21:05:15,437 | INFO     | sum of deviations: -3029989377.0
[2025-06-05 23:06:43] 2025-06-05 21:05:15,437 | INFO     | mean x: 1749153578.5
[2025-06-05 23:06:43] 2025-06-05 21:05:15,438 | INFO     | mean y: 2334537.703125
[2025-06-05 23:06:43] 2025-06-05 21:05:15,438 | INFO     | -- intersect: 8152890317.139136
[2025-06-05 23:06:43] 2025-06-05 21:05:15,438 | INFO     | intersect: 8152890317.139136
[2025-06-05 23:06:43] 2025-06-05 21:05:15,438 | INFO     | chi2: 0.006952687206195301
[2025-06-05 23:06:43] 2025-06-05 21:05:15,438 | INFO     | current chi2=0.006952687206195301 (change=2.516890855152453 %)
[2025-06-05 23:06:43] 2025-06-05 21:05:15,438 | INFO     | left removable region: 20
[2025-06-05 23:06:43] 2025-06-05 21:05:15,438 | INFO     | sum of square deviations: 435610028.0
[2025-06-05 23:06:43] 2025-06-05 21:05:15,439 | INFO     | sum of deviations: -1174193148.0000002
[2025-06-05 23:06:43] 2025-06-05 21:05:15,439 | INFO     | mean x: 1749153700.5
[2025-06-05 23:06:43] 2025-06-05 21:05:15,439 | INFO     | mean y: 2330568.035714286
[2025-06-05 23:06:43] 2025-06-05 21:05:15,439 | INFO     | -- intersect: 4717199735.202694
[2025-06-05 23:06:43] 2025-06-05 21:05:15,439 | INFO     | intersect: 4717199735.202694
[2025-06-05 23:06:43] 2025-06-05 21:05:15,439 | INFO     | chi2: 0.004507175407429436
[2025-06-05 23:06:43] 2025-06-05 21:05:15,439 | INFO     | -- intersect: 4717199735.202694
[2025-06-05 23:06:43] 2025-06-05 21:05:15,439 | INFO     | current memory leak: -2.70 B/s (using 112 data points, chi2=0.00)
[2025-06-05 23:06:43] 2025-06-05 21:05:15,440 | INFO     | ..............................
[2025-06-05 23:06:43] 2025-06-05 21:05:15,440 | INFO     | . Timing measurements:
[2025-06-05 23:06:43] 2025-06-05 21:05:15,440 | INFO     | . get job = 0 s
[2025-06-05 23:06:43] 2025-06-05 21:05:15,440 | INFO     | . initial setup = 1 s
[2025-06-05 23:06:43] 2025-06-05 21:05:15,440 | INFO     | . payload setup = 10 s
[2025-06-05 23:06:43] 2025-06-05 21:05:15,440 | INFO     | . stage-in = 0 s
[2025-06-05 23:06:43] 2025-06-05 21:05:15,440 | INFO     | . payload execution = 8413 s
[2025-06-05 23:06:43] 2025-06-05 21:05:15,440 | INFO     | . stage-out = 0 s
[2025-06-05 23:06:43] 2025-06-05 21:05:15,440 | INFO     | . log creation = 0 s
[2025-06-05 23:06:43] 2025-06-05 21:05:15,440 | INFO     | ..............................
[2025-06-05 23:06:43] 2025-06-05 21:05:15,531 | INFO     | 
[2025-06-05 23:06:43] 2025-06-05 21:05:15,531 | INFO     | job summary report
[2025-06-05 23:06:43] 2025-06-05 21:05:15,531 | INFO     | --------------------------------------------------
[2025-06-05 23:06:43] 2025-06-05 21:05:15,531 | INFO     | PanDA job id: 6678156089
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | task id: 45006595
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | errors: (none)
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | pilot state: finished 
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | transexitcode: 0
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | exeerrorcode: 0
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | exeerrordiag: 
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | exitcode: 0
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | exitmsg: OK
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | cpuconsumptiontime: 31650 s
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | nevents: 400
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | neventsw: 0
[2025-06-05 23:06:43] 2025-06-05 21:05:15,532 | INFO     | pid: 989066
[2025-06-05 23:06:43] 2025-06-05 21:05:15,533 | INFO     | pgrp: 989066
[2025-06-05 23:06:43] 2025-06-05 21:05:15,533 | INFO     | corecount: 4
[2025-06-05 23:06:43] 2025-06-05 21:05:15,533 | INFO     | event service: False
[2025-06-05 23:06:43] 2025-06-05 21:05:15,533 | INFO     | sizes: {0: 2396514, 1: 2397382, 8: 2397588, 12: 2397616, 8428: 2425742, 8430: 2434707, 8432: 2434891, 8439: 2435061}
[2025-06-05 23:06:43] 2025-06-05 21:05:15,533 | INFO     | --------------------------------------------------
[2025-06-05 23:06:43] 2025-06-05 21:05:15,533 | INFO     | 
[2025-06-05 23:06:43] 2025-06-05 21:05:15,533 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-06-05 23:06:43] 2025-06-05 21:05:15,566 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,566 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,566 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,566 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,566 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,566 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,567 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,567 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,567 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,567 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,567 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,567 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,568 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 23:06:43] 2025-06-05 21:05:15,568 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,568 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 23:06:43] 2025-06-05 21:05:15,568 | INFO     | job 6678156089 has completed (purged errors)
[2025-06-05 23:06:43] 2025-06-05 21:05:15,568 | INFO     | overall cleanup function is called
[2025-06-05 23:06:43] 2025-06-05 21:05:16,577 | INFO     | --- collectZombieJob: --- 10, [989066]
[2025-06-05 23:06:43] 2025-06-05 21:05:16,577 | INFO     | zombie collector waiting for pid 989066
[2025-06-05 23:06:43] 2025-06-05 21:05:16,577 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 23:06:43] 2025-06-05 21:05:16,578 | INFO     | collected zombie processes
[2025-06-05 23:06:43] 2025-06-05 21:05:16,578 | INFO     | will attempt to kill all subprocesses of pid=989066
[2025-06-05 23:06:43] 2025-06-05 21:05:16,634 | INFO     | PID=973553 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-05 23:06:43] 2025-06-05 21:05:16,634 | INFO     | .. there are 13 such processes running
[2025-06-05 23:06:43] 2025-06-05 21:05:17,277 | INFO     | process IDs to be killed: [989066] (in reverse order)
[2025-06-05 23:06:43] 2025-06-05 21:05:17,503 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 23:06:43] 2025-06-05 21:05:17,503 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 23:06:43] 2025-06-05 21:05:17,530 | INFO     | did not find any defunct processes belonging to 989066
[2025-06-05 23:06:43] 2025-06-05 21:05:17,556 | INFO     | did not find any defunct processes belonging to 989066
[2025-06-05 23:06:43] 2025-06-05 21:05:17,557 | INFO     | ready for new job
[2025-06-05 23:06:43] 2025-06-05 21:05:17,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 23:06:43] 2025-06-05 21:05:17,559 | INFO     | **************************************
[2025-06-05 23:06:43] 2025-06-05 21:05:17,559 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 23:06:43] 2025-06-05 21:05:17,559 | INFO     | **************************************
[2025-06-05 23:06:43] 2025-06-05 21:05:17,559 | INFO     | 
[2025-06-05 23:06:43] 2025-06-05 21:05:17,567 | INFO     | architecture information:
[2025-06-05 23:06:43] 2025-06-05 21:05:17,567 | INFO     | executing command: cat /etc/os-release
[2025-06-05 23:06:43] 2025-06-05 21:05:17,592 | INFO     | cat /etc/os-release:
[2025-06-05 23:06:43] NAME="CentOS Linux"
[2025-06-05 23:06:43] VERSION="7 (Core)"
[2025-06-05 23:06:43] ID="centos"
[2025-06-05 23:06:43] ID_LIKE="rhel fedora"
[2025-06-05 23:06:43] VERSION_ID="7"
[2025-06-05 23:06:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 23:06:43] ANSI_COLOR="0;31"
[2025-06-05 23:06:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 23:06:43] HOME_URL="https://www.centos.org/"
[2025-06-05 23:06:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 23:06:43] 
[2025-06-05 23:06:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 23:06:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 23:06:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 23:06:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 23:06:43] 
[2025-06-05 23:06:43] 2025-06-05 21:05:17,593 | INFO     | **************************************
[2025-06-05 23:06:43] 2025-06-05 21:05:18,095 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-06-05 23:06:43] 2025-06-05 21:05:18,120 | INFO     | sufficient remaining disk space (3267646980096 B)
[2025-06-05 23:06:43] 2025-06-05 21:05:18,121 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 23:06:43] 2025-06-05 21:05:18,121 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 23:06:43] 2025-06-05 21:05:18,121 | INFO     | update_server=False
[2025-06-05 23:06:43] 2025-06-05 21:05:18,121 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 23:06:43] 2025-06-05 21:05:18,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 23:06:43] 2025-06-05 21:05:18,201 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:06:43] 2025-06-05 21:05:18,202 | INFO     | aborting loop
[2025-06-05 23:06:43] 2025-06-05 21:05:18,592 | INFO     | all job control threads have been joined
[2025-06-05 23:06:43] 2025-06-05 21:05:18,640 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 23:06:43] 2025-06-05 21:05:18,640 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 23:06:43] 2025-06-05 21:05:18,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 23:06:43] 2025-06-05 21:05:18,893 | INFO     | all data control threads have been joined
[2025-06-05 23:06:43] 2025-06-05 21:05:18,981 | INFO     | all payload control threads have been joined
[2025-06-05 23:06:43] 2025-06-05 21:05:19,126 | INFO     | [job] retrieve thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:19,184 | INFO     | [job] validate thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:19,207 | INFO     | [job] job monitor thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:19,265 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:19,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 23:06:43] 2025-06-05 21:05:19,547 | INFO     | [payload] failed_post thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:19,597 | INFO     | [job] control thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:19,898 | INFO     | [data] control thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:19,928 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:19,986 | INFO     | [payload] control thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:20,056 | INFO     | [payload] validate_post thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:20,127 | INFO     | [data] copytool_out thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:20,469 | INFO     | [data] copytool_in thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:20,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 23:06:43] 2025-06-05 21:05:20,541 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:21,546 | INFO     | [job] queue monitor thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:23,526 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:28,576 | INFO     | job.realtimelogging is not enabled
[2025-06-05 23:06:43] 2025-06-05 21:05:29,582 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 23:06:43] 2025-06-05 21:05:31,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23294186043200)>', '<ExcThread(monitor, started 23293876737792)>']
[2025-06-05 23:06:43] 2025-06-05 21:05:31,707 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 23:06:43] 2025-06-05 21:05:31,707 | INFO     | [monitor] control thread has ended
[2025-06-05 23:06:43] 2025-06-05 21:05:36,431 | INFO     | all workflow threads have been joined
[2025-06-05 23:06:43] 2025-06-05 21:05:36,431 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 23:06:43] 2025-06-05 21:05:36,431 | INFO     | traces error code: 0
[2025-06-05 23:06:43] 2025-06-05 21:05:36,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 23:06:43] 2025-06-05 21:05:36,563 [wrapper] ==== pilot stdout END ====
[2025-06-05 23:06:43] 2025-06-05 21:05:36,568 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 23:06:43] 2025-06-05 21:05:36,573 [wrapper] pilotpid: 973553
[2025-06-05 23:06:43] 2025-06-05 21:05:36,577 [wrapper] Pilot exit status: 0
[2025-06-05 23:06:43] 2025-06-05 21:05:36,594 [wrapper] pandaids: 6678156089
[2025-06-05 23:06:43] 2025-06-05 21:05:36,748 [wrapper] cleanup supervisor_pilot 1504244 973554
[2025-06-05 23:06:43] 2025-06-05 21:05:36,753 [wrapper] Test setup, not cleaning
[2025-06-05 23:06:43] 2025-06-05 21:05:36,758 [wrapper] apfmon messages muted
[2025-06-05 23:06:43] 2025-06-05 21:05:36,762 [wrapper] ==== wrapper stdout END ====
[2025-06-05 23:06:43] 2025-06-05 21:05:36,767 [wrapper] ==== wrapper stderr END ====
[2025-06-05 23:06:43]  *** Error codes and diagnostics ***
[2025-06-05 23:06:43]     "exeErrorCode": 0,
[2025-06-05 23:06:43]     "exeErrorDiag": "",
[2025-06-05 23:06:43]     "pilotErrorCode": 0,
[2025-06-05 23:06:43]     "pilotErrorDiag": "",
[2025-06-05 23:06:43]  *** Listing of results directory ***
[2025-06-05 23:06:43] total 391524
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc    495897 Jun  4 01:22 pilot3.tar.gz
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc      5111 Jun  4 01:34 queuedata.json
[2025-06-05 23:06:43] -rwx------ 1 boinc boinc     37140 Jun  4 01:35 runpilot2-wrapper.sh
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc       100 Jun  5 20:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 23:06:43] -rwxr-xr-x 1 boinc boinc      7986 Jun  5 20:43 run_atlas
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc       105 Jun  5 20:43 job.xml
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc      6688 Jun  5 20:44 init_data.xml
[2025-06-05 23:06:43] -rw-r--r-- 2 boinc boinc 214088532 Jun  5 20:44 EVNT.45006593._001930.pool.root.1
[2025-06-05 23:06:43] -rw-r--r-- 2 boinc boinc     15093 Jun  5 20:44 start_atlas.sh
[2025-06-05 23:06:43] drwxrwx--x 2 boinc boinc      4096 Jun  5 20:44 shared
[2025-06-05 23:06:43] -rw-r--r-- 2 boinc boinc    508879 Jun  5 20:44 input.tar.gz
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc         0 Jun  5 20:44 boinc_lockfile
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc      2525 Jun  5 20:44 pandaJob.out
[2025-06-05 23:06:43] -rw------- 1 boinc boinc    987543 Jun  5 20:44 agis_schedconf.cvmfs.json
[2025-06-05 23:06:43] -rw------- 1 boinc boinc   1598969 Jun  5 20:44 agis_ddmendpoints.agis.ALL.json
[2025-06-05 23:06:43] drwx------ 4 boinc boinc      4096 Jun  5 20:44 pilot3
[2025-06-05 23:06:43] -rw------- 1 boinc boinc 180824594 Jun  5 23:04 HITS.45006595._048076.pool.root.1
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc       528 Jun  5 23:04 boinc_task_state.xml
[2025-06-05 23:06:43] -rw------- 1 boinc boinc      1027 Jun  5 23:05 memory_monitor_summary.json
[2025-06-05 23:06:43] -rw------- 1 boinc boinc        95 Jun  5 23:05 pilot_heartbeat.json
[2025-06-05 23:06:43] -rw------- 1 boinc boinc    287901 Jun  5 23:05 log.45006595._048076.job.log.tgz.1
[2025-06-05 23:06:43] -rw------- 1 boinc boinc      7693 Jun  5 23:05 heartbeat.json
[2025-06-05 23:06:43] -rw------- 1 boinc boinc      4437 Jun  5 23:05 pilotlog.txt
[2025-06-05 23:06:43] -rw------- 1 boinc boinc    795598 Jun  5 23:05 log.45006595._048076.job.log.1
[2025-06-05 23:06:43] -rw------- 1 boinc boinc       357 Jun  5 23:05 output.list
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc       620 Jun  5 23:05 runtime_log
[2025-06-05 23:06:43] -rw------- 1 boinc boinc   1105920 Jun  5 23:05 result.tar.gz
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc      9040 Jun  5 23:05 runtime_log.err
[2025-06-05 23:06:43] -rw------- 1 boinc boinc       663 Jun  5 23:05 DZPODmULqg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfGaKDmPtlcom.diag
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc        26 Jun  5 23:06 wrapper_checkpoint.txt
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc      8192 Jun  5 23:06 boinc_mmap_file
[2025-06-05 23:06:43] -rw-r--r-- 1 boinc boinc     20915 Jun  5 23:06 stderr.txt
[2025-06-05 23:06:43] HITS file was successfully produced:
[2025-06-05 23:06:43] -rw------- 1 boinc boinc 180824594 Jun  5 23:04 shared/HITS.pool.root.1
[2025-06-05 23:06:43]  *** Contents of shared directory: ***
[2025-06-05 23:06:43] total 387264
[2025-06-05 23:06:43] -rw-r--r-- 2 boinc boinc 214088532 Jun  5 20:44 ATLAS.root_0
[2025-06-05 23:06:43] -rw-r--r-- 2 boinc boinc     15093 Jun  5 20:44 start_atlas.sh
[2025-06-05 23:06:43] -rw-r--r-- 2 boinc boinc    508879 Jun  5 20:44 input.tar.gz
[2025-06-05 23:06:43] -rw------- 1 boinc boinc 180824594 Jun  5 23:04 HITS.pool.root.1
[2025-06-05 23:06:43] -rw------- 1 boinc boinc   1105920 Jun  5 23:05 result.tar.gz
23:06:44 (966503): run_atlas exited; CPU time 32059.860665
23:06:44 (966503): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN