Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:28:13 (9659): wrapper (7.7.26015): starting
00:28:13 (9659): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 00:28:13] Arguments: --nthreads 8
[2025-06-04 00:28:13] Threads: 8
[2025-06-04 00:28:13] Checking for CVMFS
[2025-06-04 00:28:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:28:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:28:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:28:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:28:14] 2.11.2.0 2838 35041 73212 146768 1 57 17181312 20275200 1 130560 0 11906096 99.981 6153766 7409 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 00:28:14] CVMFS is ok
[2025-06-04 00:28:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:28:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:28:14] Further information can be found at the LHC@home message board.
[2025-06-04 00:28:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:28:14] Checking for apptainer binary...
[2025-06-04 00:28:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:28:14] Running /usr/bin/apptainer --version
[2025-06-04 00:28:14] apptainer version 1.3.2-1.el7
[2025-06-04 00:28:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:28:16] c-204-2.aglt2.org
[2025-06-04 00:28:16] apptainer works
[2025-06-04 00:28:16] Set ATHENA_PROC_NUMBER=8
[2025-06-04 00:28:16] Set ATHENA_CORE_NUMBER=8
[2025-06-04 00:28:16] Starting ATLAS job with PandaID=6678156103
[2025-06-04 00:28:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 02:19:26]  *** The last 200 lines of the pilot log: ***
[2025-06-04 02:19:26] 2025-06-04 06:19:06,380 | INFO     | extracted standard info from prmon json
[2025-06-04 02:19:26] 2025-06-04 06:19:06,380 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 02:19:26] 2025-06-04 06:19:06,380 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 02:19:26] 2025-06-04 06:19:06,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 02:19:26] 2025-06-04 06:19:06,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 02:19:26] 2025-06-04 06:19:06,384 | INFO     | fitting pss+swap vs Time
[2025-06-04 02:19:26] 2025-06-04 06:19:06,385 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,385 | INFO     | sum of deviations: -12099490910.0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,386 | INFO     | mean x: 1749014639.0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,386 | INFO     | mean y: 2533335.889908257
[2025-06-04 02:19:26] 2025-06-04 06:19:06,386 | INFO     | -- intersect: 52705999622.98496
[2025-06-04 02:19:26] 2025-06-04 06:19:06,386 | INFO     | intersect: 52705999622.98496
[2025-06-04 02:19:26] 2025-06-04 06:19:06,386 | INFO     | chi2: 2.635623715304228
[2025-06-04 02:19:26] 2025-06-04 06:19:06,387 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,387 | INFO     | sum of deviations: -2913883135.999998
[2025-06-04 02:19:26] 2025-06-04 06:19:06,388 | INFO     | mean x: 1749014486.5
[2025-06-04 02:19:26] 2025-06-04 06:19:06,388 | INFO     | mean y: 2559021.576923077
[2025-06-04 02:19:26] 2025-06-04 06:19:06,388 | INFO     | -- intersect: 14615150721.74748
[2025-06-04 02:19:26] 2025-06-04 06:19:06,388 | INFO     | intersect: 14615150721.74748
[2025-06-04 02:19:26] 2025-06-04 06:19:06,388 | INFO     | chi2: 1.6541281532220469
[2025-06-04 02:19:26] 2025-06-04 06:19:06,388 | INFO     | current chi2=1.6541281532220469 (change=37.23959366365346 %)
[2025-06-04 02:19:26] 2025-06-04 06:19:06,389 | INFO     | sum of square deviations: 300842850.0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,389 | INFO     | sum of deviations: -1955775046.0000021
[2025-06-04 02:19:26] 2025-06-04 06:19:06,389 | INFO     | mean x: 1749014334.0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,389 | INFO     | mean y: 2562072.4646464647
[2025-06-04 02:19:26] 2025-06-04 06:19:06,389 | INFO     | -- intersect: 11372879131.79816
[2025-06-04 02:19:26] 2025-06-04 06:19:06,390 | INFO     | intersect: 11372879131.79816
[2025-06-04 02:19:26] 2025-06-04 06:19:06,390 | INFO     | chi2: 1.6570899374195593
[2025-06-04 02:19:26] 2025-06-04 06:19:06,390 | INFO     | current chi2=1.6570899374195593 (change=-0.1790540951584233 %)
[2025-06-04 02:19:26] 2025-06-04 06:19:06,390 | INFO     | right removable region: 98
[2025-06-04 02:19:26] 2025-06-04 06:19:06,390 | INFO     | sum of square deviations: 348769330.0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,391 | INFO     | sum of deviations: -28739998659.000004
[2025-06-04 02:19:26] 2025-06-04 06:19:06,391 | INFO     | mean x: 1749014791.5
[2025-06-04 02:19:26] 2025-06-04 06:19:06,391 | INFO     | mean y: 2580430.1346153845
[2025-06-04 02:19:26] 2025-06-04 06:19:06,391 | INFO     | -- intersect: 144128449417.1845
[2025-06-04 02:19:26] 2025-06-04 06:19:06,391 | INFO     | intersect: 144128449417.1845
[2025-06-04 02:19:26] 2025-06-04 06:19:06,392 | INFO     | chi2: 1.1354562203215968
[2025-06-04 02:19:26] 2025-06-04 06:19:06,392 | INFO     | current chi2=1.1354562203215968 (change=56.91887981852781 %)
[2025-06-04 02:19:26] 2025-06-04 06:19:06,392 | INFO     | sum of square deviations: 300842850.0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,392 | INFO     | sum of deviations: -26538960241.999996
[2025-06-04 02:19:26] 2025-06-04 06:19:06,393 | INFO     | mean x: 1749014944.0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,393 | INFO     | mean y: 2573388.282828283
[2025-06-04 02:19:26] 2025-06-04 06:19:06,393 | INFO     | -- intersect: 154292555887.38446
[2025-06-04 02:19:26] 2025-06-04 06:19:06,393 | INFO     | intersect: 154292555887.38446
[2025-06-04 02:19:26] 2025-06-04 06:19:06,393 | INFO     | chi2: 1.1351958551056485
[2025-06-04 02:19:26] 2025-06-04 06:19:06,393 | INFO     | current chi2=1.1351958551056485 (change=0.022930449566303475 %)
[2025-06-04 02:19:26] 2025-06-04 06:19:06,393 | INFO     | left removable region: 20
[2025-06-04 02:19:26] 2025-06-04 06:19:06,394 | INFO     | sum of square deviations: 147126479.5
[2025-06-04 02:19:26] 2025-06-04 06:19:06,394 | INFO     | sum of deviations: -11676070024.000004
[2025-06-04 02:19:26] 2025-06-04 06:19:06,394 | INFO     | mean x: 1749014913.5
[2025-06-04 02:19:26] 2025-06-04 06:19:06,394 | INFO     | mean y: 2591592.6666666665
[2025-06-04 02:19:26] 2025-06-04 06:19:06,394 | INFO     | -- intersect: 138805753827.282
[2025-06-04 02:19:26] 2025-06-04 06:19:06,394 | INFO     | intersect: 138805753827.282
[2025-06-04 02:19:26] 2025-06-04 06:19:06,395 | INFO     | chi2: 0.07730524826158823
[2025-06-04 02:19:26] 2025-06-04 06:19:06,395 | INFO     | -- intersect: 138805753827.282
[2025-06-04 02:19:26] 2025-06-04 06:19:06,395 | INFO     | current memory leak: -79.36 B/s (using 78 data points, chi2=0.08)
[2025-06-04 02:19:26] 2025-06-04 06:19:06,395 | INFO     | ..............................
[2025-06-04 02:19:26] 2025-06-04 06:19:06,396 | INFO     | . Timing measurements:
[2025-06-04 02:19:26] 2025-06-04 06:19:06,396 | INFO     | . get job = 0 s
[2025-06-04 02:19:26] 2025-06-04 06:19:06,396 | INFO     | . initial setup = 2 s
[2025-06-04 02:19:26] 2025-06-04 06:19:06,396 | INFO     | . payload setup = 11 s
[2025-06-04 02:19:26] 2025-06-04 06:19:06,396 | INFO     | . stage-in = 0 s
[2025-06-04 02:19:26] 2025-06-04 06:19:06,396 | INFO     | . payload execution = 6593 s
[2025-06-04 02:19:26] 2025-06-04 06:19:06,396 | INFO     | . stage-out = 0 s
[2025-06-04 02:19:26] 2025-06-04 06:19:06,396 | INFO     | . log creation = 0 s
[2025-06-04 02:19:26] 2025-06-04 06:19:06,396 | INFO     | ..............................
[2025-06-04 02:19:26] 2025-06-04 06:19:06,501 | INFO     | 
[2025-06-04 02:19:26] 2025-06-04 06:19:06,502 | INFO     | job summary report
[2025-06-04 02:19:26] 2025-06-04 06:19:06,502 | INFO     | --------------------------------------------------
[2025-06-04 02:19:26] 2025-06-04 06:19:06,502 | INFO     | PanDA job id: 6678156103
[2025-06-04 02:19:26] 2025-06-04 06:19:06,502 | INFO     | task id: 45006595
[2025-06-04 02:19:26] 2025-06-04 06:19:06,502 | INFO     | errors: (none)
[2025-06-04 02:19:26] 2025-06-04 06:19:06,503 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 02:19:26] 2025-06-04 06:19:06,503 | INFO     | pilot state: finished 
[2025-06-04 02:19:26] 2025-06-04 06:19:06,503 | INFO     | transexitcode: 0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,503 | INFO     | exeerrorcode: 0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,503 | INFO     | exeerrordiag: 
[2025-06-04 02:19:26] 2025-06-04 06:19:06,503 | INFO     | exitcode: 0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,504 | INFO     | exitmsg: OK
[2025-06-04 02:19:26] 2025-06-04 06:19:06,504 | INFO     | cpuconsumptiontime: 49466 s
[2025-06-04 02:19:26] 2025-06-04 06:19:06,504 | INFO     | nevents: 400
[2025-06-04 02:19:26] 2025-06-04 06:19:06,504 | INFO     | neventsw: 0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,504 | INFO     | pid: 19678
[2025-06-04 02:19:26] 2025-06-04 06:19:06,504 | INFO     | pgrp: 19678
[2025-06-04 02:19:26] 2025-06-04 06:19:06,505 | INFO     | corecount: 8
[2025-06-04 02:19:26] 2025-06-04 06:19:06,505 | INFO     | event service: False
[2025-06-04 02:19:26] 2025-06-04 06:19:06,505 | INFO     | sizes: {0: 2405013, 1: 2405212, 7: 2405418, 12: 2405446, 6608: 2432371, 6609: 2432370, 6611: 2441551, 6619: 2441665}
[2025-06-04 02:19:26] 2025-06-04 06:19:06,505 | INFO     | --------------------------------------------------
[2025-06-04 02:19:26] 2025-06-04 06:19:06,505 | INFO     | 
[2025-06-04 02:19:26] 2025-06-04 06:19:06,506 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 02:19:26] 2025-06-04 06:19:06,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,534 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,534 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,535 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,535 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,535 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,535 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,535 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,536 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,536 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,536 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,536 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,536 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,537 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 02:19:26] 2025-06-04 06:19:06,537 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,537 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 02:19:26] 2025-06-04 06:19:06,537 | INFO     | job 6678156103 has completed (purged errors)
[2025-06-04 02:19:26] 2025-06-04 06:19:06,537 | INFO     | overall cleanup function is called
[2025-06-04 02:19:26] 2025-06-04 06:19:07,208 | INFO     | PID=13247 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-04 02:19:26] 2025-06-04 06:19:07,546 | INFO     | --- collectZombieJob: --- 10, [19678]
[2025-06-04 02:19:26] 2025-06-04 06:19:07,546 | INFO     | zombie collector waiting for pid 19678
[2025-06-04 02:19:26] 2025-06-04 06:19:07,546 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 02:19:26] 2025-06-04 06:19:07,546 | INFO     | collected zombie processes
[2025-06-04 02:19:26] 2025-06-04 06:19:07,546 | INFO     | will attempt to kill all subprocesses of pid=19678
[2025-06-04 02:19:26] 2025-06-04 06:19:07,615 | INFO     | process IDs to be killed: [19678] (in reverse order)
[2025-06-04 02:19:26] 2025-06-04 06:19:07,667 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 02:19:26] 2025-06-04 06:19:07,667 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 02:19:26] 2025-06-04 06:19:07,671 | INFO     | did not find any defunct processes belonging to 19678
[2025-06-04 02:19:26] 2025-06-04 06:19:07,674 | INFO     | did not find any defunct processes belonging to 19678
[2025-06-04 02:19:26] 2025-06-04 06:19:07,674 | INFO     | ready for new job
[2025-06-04 02:19:26] 2025-06-04 06:19:07,674 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 02:19:26] 2025-06-04 06:19:07,676 | INFO     | **************************************
[2025-06-04 02:19:26] 2025-06-04 06:19:07,676 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 02:19:26] 2025-06-04 06:19:07,677 | INFO     | **************************************
[2025-06-04 02:19:26] 2025-06-04 06:19:07,677 | INFO     | 
[2025-06-04 02:19:26] 2025-06-04 06:19:07,677 | INFO     | architecture information:
[2025-06-04 02:19:26] 2025-06-04 06:19:07,678 | INFO     | executing command: cat /etc/os-release
[2025-06-04 02:19:26] 2025-06-04 06:19:07,696 | INFO     | cat /etc/os-release:
[2025-06-04 02:19:26] NAME="CentOS Linux"
[2025-06-04 02:19:26] VERSION="7 (Core)"
[2025-06-04 02:19:26] ID="centos"
[2025-06-04 02:19:26] ID_LIKE="rhel fedora"
[2025-06-04 02:19:26] VERSION_ID="7"
[2025-06-04 02:19:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 02:19:26] ANSI_COLOR="0;31"
[2025-06-04 02:19:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 02:19:26] HOME_URL="https://www.centos.org/"
[2025-06-04 02:19:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 02:19:26] 
[2025-06-04 02:19:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 02:19:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 02:19:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 02:19:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 02:19:26] 
[2025-06-04 02:19:26] 2025-06-04 06:19:07,696 | INFO     | **************************************
[2025-06-04 02:19:26] 2025-06-04 06:19:08,200 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 02:19:26] 2025-06-04 06:19:08,221 | INFO     | sufficient remaining disk space (18640535552 B)
[2025-06-04 02:19:26] 2025-06-04 06:19:08,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 02:19:26] 2025-06-04 06:19:08,222 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 02:19:26] 2025-06-04 06:19:08,222 | INFO     | update_server=False
[2025-06-04 02:19:26] 2025-06-04 06:19:08,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 02:19:26] 2025-06-04 06:19:08,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:19:26] 2025-06-04 06:19:08,348 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 02:19:26] 2025-06-04 06:19:08,348 | INFO     | aborting loop
[2025-06-04 02:19:26] 2025-06-04 06:19:08,579 | INFO     | all data control threads have been joined
[2025-06-04 02:19:26] 2025-06-04 06:19:09,099 | INFO     | all job control threads have been joined
[2025-06-04 02:19:26] 2025-06-04 06:19:09,214 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 02:19:26] 2025-06-04 06:19:09,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 02:19:26] 2025-06-04 06:19:09,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 02:19:26] 2025-06-04 06:19:09,228 | INFO     | [job] retrieve thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:09,228 | INFO     | [job] queue monitor thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:09,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 02:19:26] 2025-06-04 06:19:09,349 | INFO     | [job] job monitor thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:09,392 | INFO     | all payload control threads have been joined
[2025-06-04 02:19:26] 2025-06-04 06:19:09,403 | INFO     | [data] copytool_in thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:09,427 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:09,528 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:09,585 | INFO     | [data] control thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:09,624 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 02:19:26] 2025-06-04 06:19:09,868 | INFO     | [payload] failed_post thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:10,105 | INFO     | [job] control thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:10,157 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:10,246 | INFO     | [job] validate thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:10,398 | INFO     | [payload] control thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:10,455 | INFO     | [payload] validate_post thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:11,262 | INFO     | [data] copytool_out thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:13,630 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:19,221 | INFO     | job.realtimelogging is not enabled
[2025-06-04 02:19:26] 2025-06-04 06:19:20,225 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 02:19:26] 2025-06-04 06:19:21,404 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139806953060160)>', '<ExcThread(monitor, started 139806059251456)>']
[2025-06-04 02:19:26] 2025-06-04 06:19:22,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 02:19:26] 2025-06-04 06:19:22,269 | INFO     | [monitor] control thread has ended
[2025-06-04 02:19:26] 2025-06-04 06:19:26,419 | INFO     | all workflow threads have been joined
[2025-06-04 02:19:26] 2025-06-04 06:19:26,419 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 02:19:26] 2025-06-04 06:19:26,420 | INFO     | traces error code: 0
[2025-06-04 02:19:26] 2025-06-04 06:19:26,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 02:19:26] 2025-06-04 06:19:26,534 [wrapper] ==== pilot stdout END ====
[2025-06-04 02:19:26] 2025-06-04 06:19:26,539 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 02:19:26] 2025-06-04 06:19:26,544 [wrapper] pilotpid: 13247
[2025-06-04 02:19:26] 2025-06-04 06:19:26,548 [wrapper] Pilot exit status: 0
[2025-06-04 02:19:26] 2025-06-04 06:19:26,566 [wrapper] pandaids: 6678156103
[2025-06-04 02:19:26] 2025-06-04 06:19:26,604 [wrapper] cleanup supervisor_pilot 28946 13248
[2025-06-04 02:19:26] 2025-06-04 06:19:26,609 [wrapper] Test setup, not cleaning
[2025-06-04 02:19:26] 2025-06-04 06:19:26,614 [wrapper] apfmon messages muted
[2025-06-04 02:19:26] 2025-06-04 06:19:26,619 [wrapper] ==== wrapper stdout END ====
[2025-06-04 02:19:26] 2025-06-04 06:19:26,624 [wrapper] ==== wrapper stderr END ====
[2025-06-04 02:19:26]  *** Error codes and diagnostics ***
[2025-06-04 02:19:26]     "exeErrorCode": 0,
[2025-06-04 02:19:26]     "exeErrorDiag": "",
[2025-06-04 02:19:26]     "pilotErrorCode": 0,
[2025-06-04 02:19:26]     "pilotErrorDiag": "",
[2025-06-04 02:19:26]  *** Listing of results directory ***
[2025-06-04 02:19:26] total 394680
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 19:22 pilot3.tar.gz
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 19:34 queuedata.json
[2025-06-04 02:19:26] -rwx------ 1 boincer umatlas     37140 Jun  3 19:35 runpilot2-wrapper.sh
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas       100 Jun  4 00:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 02:19:26] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 00:28 run_atlas
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas       105 Jun  4 00:28 job.xml
[2025-06-04 02:19:26] -rw-r--r-- 2 boincer umatlas 213868357 Jun  4 00:28 EVNT.45006593._001931.pool.root.1
[2025-06-04 02:19:26] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 00:28 start_atlas.sh
[2025-06-04 02:19:26] drwxrwx--x 2 boincer umatlas      4096 Jun  4 00:28 shared
[2025-06-04 02:19:26] -rw-r--r-- 2 boincer umatlas    508886 Jun  4 00:28 input.tar.gz
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas         0 Jun  4 00:28 boinc_lockfile
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 00:28 pandaJob.out
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas    986745 Jun  4 00:28 agis_schedconf.cvmfs.json
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas   1603667 Jun  4 00:28 agis_ddmendpoints.agis.ALL.json
[2025-06-04 02:19:26] drwx------ 4 boincer umatlas      4096 Jun  4 00:28 pilot3
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas 184582907 Jun  4 02:18 HITS.45006595._048090.pool.root.1
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas      5824 Jun  4 02:18 init_data.xml
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas       529 Jun  4 02:18 boinc_task_state.xml
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas        95 Jun  4 02:18 pilot_heartbeat.json
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas      1049 Jun  4 02:18 memory_monitor_summary.json
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas    317988 Jun  4 02:18 log.45006595._048090.job.log.tgz.1
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas      7750 Jun  4 02:19 heartbeat.json
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas        27 Jun  4 02:19 wrapper_checkpoint.txt
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 02:19 boinc_mmap_file
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas      4425 Jun  4 02:19 pilotlog.txt
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas    617216 Jun  4 02:19 log.45006595._048090.job.log.1
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas       357 Jun  4 02:19 output.list
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas       620 Jun  4 02:19 runtime_log
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas    952320 Jun  4 02:19 result.tar.gz
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas       658 Jun  4 02:19 TumKDmVLqg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmsGaKDmMyIojm.diag
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas      8654 Jun  4 02:19 runtime_log.err
[2025-06-04 02:19:26] -rw-r--r-- 1 boincer umatlas     20834 Jun  4 02:19 stderr.txt
[2025-06-04 02:19:26] HITS file was successfully produced:
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas 184582907 Jun  4 02:18 shared/HITS.pool.root.1
[2025-06-04 02:19:26]  *** Contents of shared directory: ***
[2025-06-04 02:19:26] total 390568
[2025-06-04 02:19:26] -rw-r--r-- 2 boincer umatlas 213868357 Jun  4 00:28 ATLAS.root_0
[2025-06-04 02:19:26] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 00:28 start_atlas.sh
[2025-06-04 02:19:26] -rw-r--r-- 2 boincer umatlas    508886 Jun  4 00:28 input.tar.gz
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas 184582907 Jun  4 02:18 HITS.pool.root.1
[2025-06-04 02:19:26] -rw------- 1 boincer umatlas    952320 Jun  4 02:19 result.tar.gz
02:19:28 (9659): run_atlas exited; CPU time 49399.077769
02:19:28 (9659): called boinc_finish(0)

</stderr_txt>
]]>

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