Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:36:44 (22976): wrapper (7.7.26015): starting
00:36:44 (22976): wrapper: running run_atlas (--nthreads 12)
[2025-06-04 00:36:44] Arguments: --nthreads 12
[2025-06-04 00:36:44] Threads: 12
[2025-06-04 00:36:44] Checking for CVMFS
[2025-06-04 00:36:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 00:36:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 00:36:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 00:36:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 00:36:45] 2.11.2.0 3297 35164 84940 146768 0 58 17344522 20275200 1 130560 0 15258753 99.982 6107870 7536 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-06-04 00:36:45] CVMFS is ok
[2025-06-04 00:36:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 00:36:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 00:36:45] Further information can be found at the LHC@home message board.
[2025-06-04 00:36:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 00:36:45] Checking for apptainer binary...
[2025-06-04 00:36:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 00:36:45] Running /usr/bin/apptainer --version
[2025-06-04 00:36:45] apptainer version 1.3.2-1.el7
[2025-06-04 00:36:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 00:36:46] c-205-22.aglt2.org
[2025-06-04 00:36:46] apptainer works
[2025-06-04 00:36:46] Set ATHENA_PROC_NUMBER=12
[2025-06-04 00:36:46] Set ATHENA_CORE_NUMBER=12
[2025-06-04 00:36:46] Starting ATLAS job with PandaID=6678155205
[2025-06-04 00:36:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 01:38:47]  *** The last 200 lines of the pilot log: ***
[2025-06-04 01:38:47]  is_tar=False
[2025-06-04 01:38:47]  lfn=log.45006595._047873.job.log.tgz.1
[2025-06-04 01:38:47]  mtime=0
[2025-06-04 01:38:47]  protocol_id=None
[2025-06-04 01:38:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-04 01:38:47]  replicas=None
[2025-06-04 01:38:47]  scope=mc23_13p6TeV
[2025-06-04 01:38:47]  status=None
[2025-06-04 01:38:47]  status_code=0
[2025-06-04 01:38:47]  storage_token=
[2025-06-04 01:38:47]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6678155205/log.45006595._047873.job.log.tgz.1
[2025-06-04 01:38:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/c3/log.45006595._047873.job.log.tgz.1
[2025-06-04 01:38:47]  workdir=None
[2025-06-04 01:38:47] ]
[2025-06-04 01:38:47] 2025-06-04 05:38:23,313 | INFO     | transferring file log.45006595._047873.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6678155205/log.45006595._047873.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-04 01:38:47] 2025-06-04 05:38:23,313 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6678155205/log.45006595._047873.job.log.tgz.1 /tmp/boinchome/slots/0/log.45006595._047873.job
[2025-06-04 01:38:47] 2025-06-04 05:38:23,336 | INFO     | adding to output.list: log.45006595._047873.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4b/c3/log.45006595._047873.job.log.tg
[2025-06-04 01:38:47] 2025-06-04 05:38:23,337 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-04 01:38:47] 2025-06-04 05:38:23,337 | INFO     | summary of transferred files:
[2025-06-04 01:38:47] 2025-06-04 05:38:23,337 | INFO     |  -- lfn=log.45006595._047873.job.log.tgz.1, status_code=0, status=transferred
[2025-06-04 01:38:47] 2025-06-04 05:38:23,337 | INFO     | stage-out finished correctly
[2025-06-04 01:38:47] 2025-06-04 05:38:24,609 | INFO     | monitor loop #279: job 0:6678155205 is in state 'finished'
[2025-06-04 01:38:47] 2025-06-04 05:38:24,615 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:38:47] 2025-06-04 05:38:25,857 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-04 01:38:47] 2025-06-04 05:38:27,118 | INFO     | monitor loop #280: job 0:6678155205 is in state 'finished'
[2025-06-04 01:38:47] 2025-06-04 05:38:27,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:38:47] 2025-06-04 05:38:27,725 | INFO     | job 6678155205 has state=finished
[2025-06-04 01:38:47] 2025-06-04 05:38:27,725 | INFO     | preparing for final server update for job 6678155205 in state='finished'
[2025-06-04 01:38:47] 2025-06-04 05:38:27,726 | INFO     | this job has now completed (state=finished)
[2025-06-04 01:38:47] 2025-06-04 05:38:27,726 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-04 01:38:47] 2025-06-04 05:38:27,726 | INFO     | log transfer has been attempted: DONE
[2025-06-04 01:38:47] 2025-06-04 05:38:27,726 | INFO     | job 6678155205 has finished - writing final server update
[2025-06-04 01:38:47] 2025-06-04 05:38:27,727 | INFO     | total number of processed events: 400 (read)
[2025-06-04 01:38:47] 2025-06-04 05:38:27,728 | INFO     | executing command: lscpu
[2025-06-04 01:38:47] 2025-06-04 05:38:27,753 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 01:38:47] 2025-06-04 05:38:29,621 | INFO     | monitor loop #281: job 0:6678155205 is in state 'finished'
[2025-06-04 01:38:47] 2025-06-04 05:38:29,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:38:47] 2025-06-04 05:38:32,130 | INFO     | monitor loop #282: job 0:6678155205 is in state 'finished'
[2025-06-04 01:38:47] 2025-06-04 05:38:32,130 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 01:38:47] 2025-06-04 05:38:32,338 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-04 01:38:47] 2025-06-04 05:38:32,338 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6678155205/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 01:38:47] 2025-06-04 05:38:32,340 | INFO     | extracted standard info from prmon json
[2025-06-04 01:38:47] 2025-06-04 05:38:32,340 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 01:38:47] 2025-06-04 05:38:32,340 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 01:38:47] 2025-06-04 05:38:32,340 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 01:38:47] 2025-06-04 05:38:32,341 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 01:38:47] 2025-06-04 05:38:32,343 | INFO     | fitting pss+swap vs Time
[2025-06-04 01:38:47] 2025-06-04 05:38:32,343 | INFO     | sum of square deviations: 46147842.0
[2025-06-04 01:38:47] 2025-06-04 05:38:32,343 | INFO     | sum of deviations: -4870509864.000001
[2025-06-04 01:38:47] 2025-06-04 05:38:32,344 | INFO     | mean x: 1749013741.0
[2025-06-04 01:38:47] 2025-06-04 05:38:32,344 | INFO     | mean y: 2839290.396226415
[2025-06-04 01:38:47] 2025-06-04 05:38:32,344 | INFO     | -- intersect: 184596274402.9643
[2025-06-04 01:38:47] 2025-06-04 05:38:32,344 | INFO     | intersect: 184596274402.9643
[2025-06-04 01:38:47] 2025-06-04 05:38:32,344 | INFO     | chi2: 0.05229801094396629
[2025-06-04 01:38:47] 2025-06-04 05:38:32,345 | INFO     | -- intersect: 184596274402.9643
[2025-06-04 01:38:47] 2025-06-04 05:38:32,345 | INFO     | current memory leak: -105.54 B/s (using 53 data points, chi2=0.05)
[2025-06-04 01:38:47] 2025-06-04 05:38:32,345 | INFO     | ..............................
[2025-06-04 01:38:47] 2025-06-04 05:38:32,346 | INFO     | . Timing measurements:
[2025-06-04 01:38:47] 2025-06-04 05:38:32,346 | INFO     | . get job = 0 s
[2025-06-04 01:38:47] 2025-06-04 05:38:32,346 | INFO     | . initial setup = 2 s
[2025-06-04 01:38:47] 2025-06-04 05:38:32,346 | INFO     | . payload setup = 9 s
[2025-06-04 01:38:47] 2025-06-04 05:38:32,346 | INFO     | . stage-in = 0 s
[2025-06-04 01:38:47] 2025-06-04 05:38:32,346 | INFO     | . payload execution = 3653 s
[2025-06-04 01:38:47] 2025-06-04 05:38:32,347 | INFO     | . stage-out = 0 s
[2025-06-04 01:38:47] 2025-06-04 05:38:32,347 | INFO     | . log creation = 0 s
[2025-06-04 01:38:47] 2025-06-04 05:38:32,347 | INFO     | ..............................
[2025-06-04 01:38:47] 2025-06-04 05:38:32,771 | INFO     | 
[2025-06-04 01:38:47] 2025-06-04 05:38:32,771 | INFO     | job summary report
[2025-06-04 01:38:47] 2025-06-04 05:38:32,771 | INFO     | --------------------------------------------------
[2025-06-04 01:38:47] 2025-06-04 05:38:32,771 | INFO     | PanDA job id: 6678155205
[2025-06-04 01:38:47] 2025-06-04 05:38:32,771 | INFO     | task id: 45006595
[2025-06-04 01:38:47] 2025-06-04 05:38:32,771 | INFO     | errors: (none)
[2025-06-04 01:38:47] 2025-06-04 05:38:32,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 01:38:47] 2025-06-04 05:38:32,772 | INFO     | pilot state: finished 
[2025-06-04 01:38:47] 2025-06-04 05:38:32,772 | INFO     | transexitcode: 0
[2025-06-04 01:38:47] 2025-06-04 05:38:32,772 | INFO     | exeerrorcode: 0
[2025-06-04 01:38:47] 2025-06-04 05:38:32,772 | INFO     | exeerrordiag: 
[2025-06-04 01:38:47] 2025-06-04 05:38:32,772 | INFO     | exitcode: 0
[2025-06-04 01:38:47] 2025-06-04 05:38:32,773 | INFO     | exitmsg: OK
[2025-06-04 01:38:47] 2025-06-04 05:38:32,773 | INFO     | cpuconsumptiontime: 39030 s
[2025-06-04 01:38:47] 2025-06-04 05:38:32,773 | INFO     | nevents: 400
[2025-06-04 01:38:47] 2025-06-04 05:38:32,773 | INFO     | neventsw: 0
[2025-06-04 01:38:47] 2025-06-04 05:38:32,773 | INFO     | pid: 583
[2025-06-04 01:38:47] 2025-06-04 05:38:32,773 | INFO     | pgrp: 583
[2025-06-04 01:38:47] 2025-06-04 05:38:32,773 | INFO     | corecount: 12
[2025-06-04 01:38:47] 2025-06-04 05:38:32,774 | INFO     | event service: False
[2025-06-04 01:38:47] 2025-06-04 05:38:32,774 | INFO     | sizes: {0: 2405184, 5: 2405390, 11: 2405446, 3666: 2431012, 3669: 2439953, 3671: 2440009, 3678: 2440307}
[2025-06-04 01:38:47] 2025-06-04 05:38:32,774 | INFO     | --------------------------------------------------
[2025-06-04 01:38:47] 2025-06-04 05:38:32,774 | INFO     | 
[2025-06-04 01:38:47] 2025-06-04 05:38:32,774 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-06-04 01:38:47] 2025-06-04 05:38:32,801 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,801 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,802 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,802 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,803 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,803 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,803 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,803 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,804 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,804 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,804 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,804 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 01:38:47] 2025-06-04 05:38:32,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,805 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 01:38:47] 2025-06-04 05:38:32,805 | INFO     | job 6678155205 has completed (purged errors)
[2025-06-04 01:38:47] 2025-06-04 05:38:32,805 | INFO     | overall cleanup function is called
[2025-06-04 01:38:47] 2025-06-04 05:38:33,813 | INFO     | --- collectZombieJob: --- 10, [583]
[2025-06-04 01:38:47] 2025-06-04 05:38:33,813 | INFO     | zombie collector waiting for pid 583
[2025-06-04 01:38:47] 2025-06-04 05:38:33,813 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 01:38:47] 2025-06-04 05:38:33,813 | INFO     | collected zombie processes
[2025-06-04 01:38:47] 2025-06-04 05:38:33,814 | INFO     | will attempt to kill all subprocesses of pid=583
[2025-06-04 01:38:47] 2025-06-04 05:38:33,907 | INFO     | process IDs to be killed: [583] (in reverse order)
[2025-06-04 01:38:47] 2025-06-04 05:38:33,963 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 01:38:47] 2025-06-04 05:38:33,964 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 01:38:47] 2025-06-04 05:38:33,967 | INFO     | did not find any defunct processes belonging to 583
[2025-06-04 01:38:47] 2025-06-04 05:38:33,969 | INFO     | did not find any defunct processes belonging to 583
[2025-06-04 01:38:47] 2025-06-04 05:38:33,970 | INFO     | ready for new job
[2025-06-04 01:38:47] 2025-06-04 05:38:33,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 01:38:47] 2025-06-04 05:38:33,971 | INFO     | **************************************
[2025-06-04 01:38:47] 2025-06-04 05:38:33,971 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 01:38:47] 2025-06-04 05:38:33,971 | INFO     | **************************************
[2025-06-04 01:38:47] 2025-06-04 05:38:33,971 | INFO     | 
[2025-06-04 01:38:47] 2025-06-04 05:38:33,972 | INFO     | architecture information:
[2025-06-04 01:38:47] 2025-06-04 05:38:33,972 | INFO     | executing command: cat /etc/os-release
[2025-06-04 01:38:47] 2025-06-04 05:38:33,987 | INFO     | cat /etc/os-release:
[2025-06-04 01:38:47] NAME="CentOS Linux"
[2025-06-04 01:38:47] VERSION="7 (Core)"
[2025-06-04 01:38:47] ID="centos"
[2025-06-04 01:38:47] ID_LIKE="rhel fedora"
[2025-06-04 01:38:47] VERSION_ID="7"
[2025-06-04 01:38:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 01:38:47] ANSI_COLOR="0;31"
[2025-06-04 01:38:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 01:38:47] HOME_URL="https://www.centos.org/"
[2025-06-04 01:38:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 01:38:47] 
[2025-06-04 01:38:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 01:38:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 01:38:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 01:38:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 01:38:47] 
[2025-06-04 01:38:47] 2025-06-04 05:38:33,987 | INFO     | **************************************
[2025-06-04 01:38:47] 2025-06-04 05:38:34,490 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-06-04 01:38:47] 2025-06-04 05:38:34,507 | INFO     | sufficient remaining disk space (29418848256 B)
[2025-06-04 01:38:47] 2025-06-04 05:38:34,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 01:38:47] 2025-06-04 05:38:34,507 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 01:38:47] 2025-06-04 05:38:34,508 | INFO     | update_server=False
[2025-06-04 01:38:47] 2025-06-04 05:38:34,508 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 01:38:47] 2025-06-04 05:38:34,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 01:38:47] 2025-06-04 05:38:34,633 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-04 01:38:47] 2025-06-04 05:38:34,634 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-04 01:38:47] 2025-06-04 05:38:34,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:38:47] 2025-06-04 05:38:34,639 | INFO     | will abort loop
[2025-06-04 01:38:47] 2025-06-04 05:38:34,668 | INFO     | all job control threads have been joined
[2025-06-04 01:38:47] 2025-06-04 05:38:35,019 | INFO     | all payload control threads have been joined
[2025-06-04 01:38:47] 2025-06-04 05:38:35,394 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 01:38:47] 2025-06-04 05:38:35,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 01:38:47] 2025-06-04 05:38:35,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 01:38:47] 2025-06-04 05:38:35,513 | INFO     | [job] retrieve thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:35,522 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:35,526 | INFO     | all data control threads have been joined
[2025-06-04 01:38:47] 2025-06-04 05:38:35,538 | INFO     | [job] validate thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:35,645 | INFO     | [job] job monitor thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:35,674 | INFO     | [job] control thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:35,813 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:35,994 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:35,997 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:36,025 | INFO     | [payload] control thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:36,315 | INFO     | [data] copytool_in thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:36,450 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 01:38:47] 2025-06-04 05:38:36,512 | INFO     | [data] copytool_out thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:36,532 | INFO     | [data] control thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:36,793 | INFO     | [payload] validate_post thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:36,810 | INFO     | [payload] failed_post thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:37,442 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 01:38:47] 2025-06-04 05:38:38,447 | INFO     | [job] queue monitor thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:40,456 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 01:38:47] 2025-06-04 05:38:42,543 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139708786988864)>', '<ExcThread(monitor, started 139708357138176)>']
[2025-06-04 01:38:47] 2025-06-04 05:38:43,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 01:38:47] 2025-06-04 05:38:43,416 | INFO     | [monitor] control thread has ended
[2025-06-04 01:38:47] 2025-06-04 05:38:47,568 | INFO     | all workflow threads have been joined
[2025-06-04 01:38:47] 2025-06-04 05:38:47,568 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 01:38:47] 2025-06-04 05:38:47,568 | INFO     | traces error code: 0
[2025-06-04 01:38:47] 2025-06-04 05:38:47,569 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 01:38:47] 2025-06-04 05:38:47,660 [wrapper] ==== pilot stdout END ====
[2025-06-04 01:38:47] 2025-06-04 05:38:47,664 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 01:38:47] 2025-06-04 05:38:47,668 [wrapper] pilotpid: 26578
[2025-06-04 01:38:47] 2025-06-04 05:38:47,671 [wrapper] Pilot exit status: 0
[2025-06-04 01:38:47] 2025-06-04 05:38:47,688 [wrapper] pandaids: 6678155205
[2025-06-04 01:38:47] 2025-06-04 05:38:47,727 [wrapper] cleanup supervisor_pilot  4633 26579
[2025-06-04 01:38:47] 2025-06-04 05:38:47,731 [wrapper] Test setup, not cleaning
[2025-06-04 01:38:47] 2025-06-04 05:38:47,735 [wrapper] apfmon messages muted
[2025-06-04 01:38:47] 2025-06-04 05:38:47,739 [wrapper] ==== wrapper stdout END ====
[2025-06-04 01:38:47] 2025-06-04 05:38:47,743 [wrapper] ==== wrapper stderr END ====
[2025-06-04 01:38:47]  *** Error codes and diagnostics ***
[2025-06-04 01:38:47]     "exeErrorCode": 0,
[2025-06-04 01:38:47]     "exeErrorDiag": "",
[2025-06-04 01:38:47]     "pilotErrorCode": 0,
[2025-06-04 01:38:47]     "pilotErrorDiag": "",
[2025-06-04 01:38:47]  *** Listing of results directory ***
[2025-06-04 01:38:47] total 386068
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas    495897 Jun  3 18:42 pilot3.tar.gz
[2025-06-04 01:38:47] -rwx------ 1 boincer umatlas     37140 Jun  3 19:19 runpilot2-wrapper.sh
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas      5111 Jun  3 19:19 queuedata.json
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas       100 Jun  4 00:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 01:38:47] -rwxr-xr-x 1 boincer umatlas      7986 Jun  4 00:36 run_atlas
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas       105 Jun  4 00:36 job.xml
[2025-06-04 01:38:47] -rw-r--r-- 2 boincer umatlas 217423943 Jun  4 00:36 EVNT.45006593._001922.pool.root.1
[2025-06-04 01:38:47] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 00:36 start_atlas.sh
[2025-06-04 01:38:47] drwxrwx--x 2 boincer umatlas      4096 Jun  4 00:36 shared
[2025-06-04 01:38:47] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 00:36 input.tar.gz
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas         0 Jun  4 00:36 boinc_lockfile
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas      2525 Jun  4 00:36 pandaJob.out
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas    986745 Jun  4 00:36 agis_schedconf.cvmfs.json
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas   1603667 Jun  4 00:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 01:38:47] drwx------ 4 boincer umatlas      4096 Jun  4 00:36 pilot3
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas      5868 Jun  4 01:27 init_data.xml
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas        95 Jun  4 01:37 pilot_heartbeat.json
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas 172634314 Jun  4 01:37 HITS.45006595._047873.pool.root.1
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas       529 Jun  4 01:38 boinc_task_state.xml
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas      1048 Jun  4 01:38 memory_monitor_summary.json
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas    357531 Jun  4 01:38 log.45006595._047873.job.log.tgz.1
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas      7756 Jun  4 01:38 heartbeat.json
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas        27 Jun  4 01:38 wrapper_checkpoint.txt
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas      8192 Jun  4 01:38 boinc_mmap_file
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas      4539 Jun  4 01:38 pilotlog.txt
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas    363627 Jun  4 01:38 log.45006595._047873.job.log.1
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas       357 Jun  4 01:38 output.list
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas       620 Jun  4 01:38 runtime_log
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas    737280 Jun  4 01:38 result.tar.gz
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas      8661 Jun  4 01:38 runtime_log.err
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas       659 Jun  4 01:38 bgtKDmZ5pg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQEaKDmyqez6m.diag
[2025-06-04 01:38:47] -rw-r--r-- 1 boincer umatlas     21447 Jun  4 01:38 stderr.txt
[2025-06-04 01:38:47] HITS file was successfully produced:
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas 172634314 Jun  4 01:37 shared/HITS.pool.root.1
[2025-06-04 01:38:47]  *** Contents of shared directory: ***
[2025-06-04 01:38:47] total 382164
[2025-06-04 01:38:47] -rw-r--r-- 2 boincer umatlas 217423943 Jun  4 00:36 ATLAS.root_0
[2025-06-04 01:38:47] -rw-r--r-- 2 boincer umatlas     15093 Jun  4 00:36 start_atlas.sh
[2025-06-04 01:38:47] -rw-r--r-- 2 boincer umatlas    508880 Jun  4 00:36 input.tar.gz
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas 172634314 Jun  4 01:37 HITS.pool.root.1
[2025-06-04 01:38:47] -rw------- 1 boincer umatlas    737280 Jun  4 01:38 result.tar.gz
01:38:49 (22976): run_atlas exited; CPU time 38999.241624
01:38:49 (22976): called boinc_finish(0)

</stderr_txt>
]]>

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