Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:43:55 (14964): wrapper (7.7.26015): starting
15:43:55 (14964): wrapper: running run_atlas (--nthreads 8)
[2025-06-04 15:43:55] Arguments: --nthreads 8
[2025-06-04 15:43:55] Threads: 8
[2025-06-04 15:43:55] Checking for CVMFS
[2025-06-04 15:43:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-04 15:43:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-04 15:43:58] Running cvmfs_config stat atlas.cern.ch
[2025-06-04 15:44:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-04 15:44:00] 2.11.2.0 2200 33281 91332 146781 3 69 16166723 25165825 2745 130560 0 17739600 99.753 21264714 2207 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-04 15:44:00] CVMFS is ok
[2025-06-04 15:44:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 15:44:00] Checking for apptainer binary...
[2025-06-04 15:44:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-04 15:44:00] Running /usr/bin/apptainer --version
[2025-06-04 15:44:00] apptainer version 1.3.2-1.el7
[2025-06-04 15:55:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 15:55:28] cg-vwn296.simple-grid.lan
[2025-06-04 15:55:28] apptainer works
[2025-06-04 15:55:28] Set ATHENA_PROC_NUMBER=8
[2025-06-04 15:55:28] Set ATHENA_CORE_NUMBER=8
[2025-06-04 15:55:28] Starting ATLAS job with PandaID=6678247931
[2025-06-04 15:55:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 00:44:50]  *** The last 200 lines of the pilot log: ***
[2025-06-05 00:44:50] 2025-06-04 18:00:31,191 | INFO     | using path: /var/lib/boinc/slots/28/PanDA_Pilot-6678247931/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 00:44:50] 2025-06-04 18:00:31,192 | INFO     | extracted standard info from prmon json
[2025-06-05 00:44:50] 2025-06-04 18:00:31,192 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 00:44:50] 2025-06-04 18:00:31,192 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 00:44:50] 2025-06-04 18:00:31,192 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 00:44:50] 2025-06-04 18:00:31,192 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 00:44:50] 2025-06-04 18:00:31,197 | INFO     | fitting pss+swap vs Time
[2025-06-05 00:44:50] 2025-06-04 18:00:31,198 | INFO     | sum of square deviations: 3723716330.0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,200 | INFO     | sum of deviations: 83395506816.0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,200 | INFO     | mean x: 1749052947.0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,200 | INFO     | mean y: 2426792.288209607
[2025-06-05 00:44:50] 2025-06-04 18:00:31,201 | INFO     | -- intersect: -39168966524.635956
[2025-06-05 00:44:50] 2025-06-04 18:00:31,201 | INFO     | intersect: -39168966524.635956
[2025-06-05 00:44:50] 2025-06-04 18:00:31,201 | INFO     | chi2: 6.946578821206823
[2025-06-05 00:44:50] 2025-06-04 18:00:31,202 | INFO     | sum of square deviations: 3485088600.0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,203 | INFO     | sum of deviations: 96528472261.5
[2025-06-05 00:44:50] 2025-06-04 18:00:31,204 | INFO     | mean x: 1749052794.5
[2025-06-05 00:44:50] 2025-06-04 18:00:31,204 | INFO     | mean y: 2435013.7633928573
[2025-06-05 00:44:50] 2025-06-04 18:00:31,204 | INFO     | -- intersect: -48442070574.35632
[2025-06-05 00:44:50] 2025-06-04 18:00:31,204 | INFO     | intersect: -48442070574.35632
[2025-06-05 00:44:50] 2025-06-04 18:00:31,211 | INFO     | chi2: 6.235940744270642
[2025-06-05 00:44:50] 2025-06-04 18:00:31,211 | INFO     | current chi2=6.235940744270642 (change=10.230044101230291 %)
[2025-06-05 00:44:50] 2025-06-04 18:00:31,211 | INFO     | right removable region: 223
[2025-06-05 00:44:50] 2025-06-04 18:00:31,212 | INFO     | sum of square deviations: 3485088600.0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,213 | INFO     | sum of deviations: 5239501975.000002
[2025-06-05 00:44:50] 2025-06-04 18:00:31,214 | INFO     | mean x: 1749053099.5
[2025-06-05 00:44:50] 2025-06-04 18:00:31,214 | INFO     | mean y: 2476691.1785714286
[2025-06-05 00:44:50] 2025-06-04 18:00:31,214 | INFO     | -- intersect: -2627059662.4194765
[2025-06-05 00:44:50] 2025-06-04 18:00:31,214 | INFO     | intersect: -2627059662.4194765
[2025-06-05 00:44:50] 2025-06-04 18:00:31,214 | INFO     | chi2: 2.185367887073051
[2025-06-05 00:44:50] 2025-06-04 18:00:31,215 | INFO     | current chi2=2.185367887073051 (change=68.5403715509358 %)
[2025-06-05 00:44:50] 2025-06-04 18:00:31,215 | INFO     | sum of square deviations: 3256879670.0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,217 | INFO     | sum of deviations: -31303075735.999996
[2025-06-05 00:44:50] 2025-06-04 18:00:31,217 | INFO     | mean x: 1749053252.0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,217 | INFO     | mean y: 2500944.99543379
[2025-06-05 00:44:50] 2025-06-04 18:00:31,217 | INFO     | -- intersect: 16813298997.492437
[2025-06-05 00:44:50] 2025-06-04 18:00:31,217 | INFO     | intersect: 16813298997.492437
[2025-06-05 00:44:50] 2025-06-04 18:00:31,218 | INFO     | chi2: 0.9221701146861166
[2025-06-05 00:44:50] 2025-06-04 18:00:31,218 | INFO     | current chi2=0.9221701146861166 (change=57.80252285480339 %)
[2025-06-05 00:44:50] 2025-06-04 18:00:31,218 | INFO     | sum of square deviations: 3038856977.5
[2025-06-05 00:44:50] 2025-06-04 18:00:31,220 | INFO     | sum of deviations: -30395313111.5
[2025-06-05 00:44:50] 2025-06-04 18:00:31,220 | INFO     | mean x: 1749053404.5
[2025-06-05 00:44:50] 2025-06-04 18:00:31,221 | INFO     | mean y: 2500273.7056074766
[2025-06-05 00:44:50] 2025-06-04 18:00:31,221 | INFO     | -- intersect: 17496915533.17221
[2025-06-05 00:44:50] 2025-06-04 18:00:31,221 | INFO     | intersect: 17496915533.17221
[2025-06-05 00:44:50] 2025-06-04 18:00:31,221 | INFO     | chi2: 0.9077385380236644
[2025-06-05 00:44:50] 2025-06-04 18:00:31,221 | INFO     | current chi2=0.9077385380236644 (change=1.564958182077322 %)
[2025-06-05 00:44:50] 2025-06-04 18:00:31,221 | INFO     | left removable region: 30
[2025-06-05 00:44:50] 2025-06-04 18:00:31,222 | INFO     | sum of square deviations: 2229146912.0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,223 | INFO     | sum of deviations: 4761252214.999999
[2025-06-05 00:44:50] 2025-06-04 18:00:31,224 | INFO     | mean x: 1749053679.0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,224 | INFO     | mean y: 2494288.284974093
[2025-06-05 00:44:50] 2025-06-04 18:00:31,224 | INFO     | -- intersect: -3733323058.9086266
[2025-06-05 00:44:50] 2025-06-04 18:00:31,224 | INFO     | intersect: -3733323058.9086266
[2025-06-05 00:44:50] 2025-06-04 18:00:31,224 | INFO     | chi2: 0.00035154660164270164
[2025-06-05 00:44:50] 2025-06-04 18:00:31,224 | INFO     | -- intersect: -3733323058.9086266
[2025-06-05 00:44:50] 2025-06-04 18:00:31,225 | INFO     | current memory leak: 2.14 B/s (using 193 data points, chi2=0.00)
[2025-06-05 00:44:50] 2025-06-04 18:00:31,225 | INFO     | ..............................
[2025-06-05 00:44:50] 2025-06-04 18:00:31,226 | INFO     | . Timing measurements:
[2025-06-05 00:44:50] 2025-06-04 18:00:31,226 | INFO     | . get job = 0 s
[2025-06-05 00:44:50] 2025-06-04 18:00:31,226 | INFO     | . initial setup = 7 s
[2025-06-05 00:44:50] 2025-06-04 18:00:31,226 | INFO     | . payload setup = 163 s
[2025-06-05 00:44:50] 2025-06-04 18:00:31,226 | INFO     | . stage-in = 0 s
[2025-06-05 00:44:50] 2025-06-04 18:00:31,226 | INFO     | . payload execution = 14085 s
[2025-06-05 00:44:50] 2025-06-04 18:00:31,226 | INFO     | . stage-out = 3 s
[2025-06-05 00:44:50] 2025-06-04 18:00:31,226 | INFO     | . log creation = 0 s
[2025-06-05 00:44:50] 2025-06-04 18:00:31,226 | INFO     | ..............................
[2025-06-05 00:44:50] 2025-06-04 18:00:31,352 | INFO     | 
[2025-06-05 00:44:50] 2025-06-04 18:00:31,353 | INFO     | job summary report
[2025-06-05 00:44:50] 2025-06-04 18:00:31,353 | INFO     | --------------------------------------------------
[2025-06-05 00:44:50] 2025-06-04 18:00:31,353 | INFO     | PanDA job id: 6678247931
[2025-06-05 00:44:50] 2025-06-04 18:00:31,353 | INFO     | task id: 45006595
[2025-06-05 00:44:50] 2025-06-04 18:00:31,353 | INFO     | errors: (none)
[2025-06-05 00:44:50] 2025-06-04 18:00:31,353 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 00:44:50] 2025-06-04 18:00:31,353 | INFO     | pilot state: finished 
[2025-06-05 00:44:50] 2025-06-04 18:00:31,353 | INFO     | transexitcode: 0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,353 | INFO     | exeerrorcode: 0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,354 | INFO     | exeerrordiag: 
[2025-06-05 00:44:50] 2025-06-04 18:00:31,354 | INFO     | exitcode: 0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,354 | INFO     | exitmsg: OK
[2025-06-05 00:44:50] 2025-06-04 18:00:31,354 | INFO     | cpuconsumptiontime: 50920 s
[2025-06-05 00:44:50] 2025-06-04 18:00:31,354 | INFO     | nevents: 400
[2025-06-05 00:44:50] 2025-06-04 18:00:31,354 | INFO     | neventsw: 0
[2025-06-05 00:44:50] 2025-06-04 18:00:31,354 | INFO     | pid: 5338
[2025-06-05 00:44:50] 2025-06-04 18:00:31,354 | INFO     | pgrp: 5338
[2025-06-05 00:44:50] 2025-06-04 18:00:31,354 | INFO     | corecount: 8
[2025-06-05 00:44:50] 2025-06-04 18:00:31,354 | INFO     | event service: False
[2025-06-05 00:44:50] 2025-06-04 18:00:31,354 | INFO     | sizes: {0: 2396514, 1: 2397200, 2: 2397399, 13: 2397399, 23: 2397455, 34: 2397483, 45: 2397639, 56: 2397667, 66: 2397695, 77: 2397723, 85: 2397985, 88: 2398293, 14
[2025-06-05 00:44:50] 2025-06-04 18:00:31,354 | INFO     | --------------------------------------------------
[2025-06-05 00:44:50] 2025-06-04 18:00:31,355 | INFO     | 
[2025-06-05 00:44:50] 2025-06-04 18:00:31,355 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2025-06-05 00:44:50] 2025-06-04 18:00:31,757 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,758 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,758 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,758 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,758 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,758 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,758 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,759 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,759 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,759 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,759 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,759 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 00:44:50] 2025-06-04 18:00:31,759 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,759 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 00:44:50] 2025-06-04 18:00:31,760 | INFO     | job 6678247931 has completed (purged errors)
[2025-06-05 00:44:50] 2025-06-04 18:00:31,760 | INFO     | overall cleanup function is called
[2025-06-05 00:44:50] 2025-06-04 18:00:32,768 | INFO     | --- collectZombieJob: --- 10, [5338]
[2025-06-05 00:44:50] 2025-06-04 18:00:32,769 | INFO     | zombie collector waiting for pid 5338
[2025-06-05 00:44:50] 2025-06-04 18:00:32,769 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 00:44:50] 2025-06-04 18:00:32,769 | INFO     | collected zombie processes
[2025-06-05 00:44:50] 2025-06-04 18:00:32,769 | INFO     | will attempt to kill all subprocesses of pid=5338
[2025-06-05 00:44:50] 2025-06-04 18:00:32,883 | INFO     | process IDs to be killed: [5338] (in reverse order)
[2025-06-05 00:44:50] 2025-06-04 18:00:33,751 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 00:44:50] 2025-06-04 18:00:33,751 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 00:44:50] 2025-06-04 18:00:33,755 | INFO     | did not find any defunct processes belonging to 5338
[2025-06-05 00:44:50] 2025-06-04 18:00:33,758 | INFO     | did not find any defunct processes belonging to 5338
[2025-06-05 00:44:50] 2025-06-04 18:00:33,759 | INFO     | ready for new job
[2025-06-05 00:44:50] 2025-06-04 18:00:33,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 00:44:50] 2025-06-04 18:00:33,763 | INFO     | **************************************
[2025-06-05 00:44:50] 2025-06-04 18:00:33,763 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 00:44:50] 2025-06-04 18:00:33,763 | INFO     | **************************************
[2025-06-05 00:44:50] 2025-06-04 18:00:33,763 | INFO     | 
[2025-06-05 00:44:50] 2025-06-04 18:00:33,764 | INFO     | pilot is running in a VM
[2025-06-05 00:44:50] 2025-06-04 18:00:33,764 | INFO     | architecture information:
[2025-06-05 00:44:50] 2025-06-04 18:00:33,780 | INFO     | executing command: cat /etc/os-release
[2025-06-05 00:44:50] 2025-06-04 18:00:34,119 | INFO     | cat /etc/os-release:
[2025-06-05 00:44:50] NAME="CentOS Linux"
[2025-06-05 00:44:50] VERSION="7 (Core)"
[2025-06-05 00:44:50] ID="centos"
[2025-06-05 00:44:50] ID_LIKE="rhel fedora"
[2025-06-05 00:44:50] VERSION_ID="7"
[2025-06-05 00:44:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 00:44:50] ANSI_COLOR="0;31"
[2025-06-05 00:44:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 00:44:50] HOME_URL="https://www.centos.org/"
[2025-06-05 00:44:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 00:44:50] 
[2025-06-05 00:44:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 00:44:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 00:44:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 00:44:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 00:44:50] 
[2025-06-05 00:44:50] 2025-06-04 18:00:34,119 | INFO     | **************************************
[2025-06-05 00:44:50] 2025-06-04 18:00:34,623 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2025-06-05 00:44:50] 2025-06-04 18:00:34,917 | INFO     | sufficient remaining disk space (497180213248 B)
[2025-06-05 00:44:50] 2025-06-04 18:00:34,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 00:44:50] 2025-06-04 18:00:34,918 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 00:44:50] 2025-06-04 18:00:34,918 | INFO     | update_server=False
[2025-06-05 00:44:50] 2025-06-04 18:00:34,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 00:44:50] 2025-06-04 18:00:34,919 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 00:44:50] 2025-06-04 18:00:35,037 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 00:44:50] 2025-06-04 18:00:35,037 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 00:44:50] 2025-06-04 18:00:35,037 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 00:44:50] 2025-06-04 18:00:35,050 | INFO     | all job control threads have been joined
[2025-06-05 00:44:50] 2025-06-04 18:00:35,137 | INFO     | all payload control threads have been joined
[2025-06-05 00:44:50] 2025-06-04 18:00:35,644 | INFO     | all data control threads have been joined
[2025-06-05 00:44:50] 2025-06-04 18:00:35,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:44:50] 2025-06-04 18:00:35,660 | INFO     | aborting loop
[2025-06-05 00:44:50] 2025-06-04 18:00:35,925 | INFO     | [job] retrieve thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:36,057 | INFO     | [job] control thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:36,143 | INFO     | [payload] control thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:36,257 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:36,334 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:36,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 00:44:50] 2025-06-04 18:00:36,455 | INFO     | [job] validate thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:36,459 | INFO     | [data] copytool_in thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:36,486 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:36,651 | INFO     | [data] control thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:36,666 | INFO     | [job] job monitor thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:36,927 | INFO     | [data] copytool_out thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:36,968 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:37,325 | INFO     | [payload] validate_post thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:37,375 | INFO     | [job] queue monitor thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:37,489 | INFO     | [payload] failed_post thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:38,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 00:44:50] 2025-06-04 18:00:42,311 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 00:44:50] 2025-06-04 18:00:42,449 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566459279168)>', '<ExcThread(monitor, started 140565849024256)>']
[2025-06-05 00:44:50] 2025-06-04 18:00:43,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 00:44:50] 2025-06-04 18:00:43,086 | INFO     | [monitor] control thread has ended
[2025-06-05 00:44:50] 2025-06-04 18:00:47,475 | INFO     | all workflow threads have been joined
[2025-06-05 00:44:50] 2025-06-04 18:00:47,476 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 00:44:50] 2025-06-04 18:00:47,476 | INFO     | traces error code: 0
[2025-06-05 00:44:50] 2025-06-04 18:00:47,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 00:44:50] 2025-06-04 18:00:47,813 [wrapper] ==== pilot stdout END ====
[2025-06-05 00:44:50] 2025-06-04 18:00:47,933 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 00:44:50] 2025-06-04 18:00:48,025 [wrapper] pilotpid: 28943
[2025-06-05 00:44:50] 2025-06-04 18:00:48,117 [wrapper] Pilot exit status: 0
[2025-06-05 00:44:50] 2025-06-04 18:00:48,586 [wrapper] pandaids: 6678247931
[2025-06-05 00:44:50] 2025-06-04 18:00:49,260 [wrapper] cleanup supervisor_pilot 31650 28944
[2025-06-05 00:44:50] 2025-06-04 18:00:49,357 [wrapper] Test setup, not cleaning
[2025-06-05 00:44:50] 2025-06-04 18:00:49,442 [wrapper] apfmon messages muted
[2025-06-05 00:44:50] 2025-06-04 18:00:49,502 [wrapper] ==== wrapper stdout END ====
[2025-06-05 00:44:50] 2025-06-04 18:00:49,609 [wrapper] ==== wrapper stderr END ====
[2025-06-05 00:44:50]  *** Error codes and diagnostics ***
[2025-06-05 00:44:50]     "exeErrorCode": 0,
[2025-06-05 00:44:50]     "exeErrorDiag": "",
[2025-06-05 00:44:50]     "pilotErrorCode": 0,
[2025-06-05 00:44:50]     "pilotErrorDiag": "",
[2025-06-05 00:44:50]  *** Listing of results directory ***
[2025-06-05 00:44:50] total 395612
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc    495897 Jun  4 03:59 pilot3.tar.gz
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc      5111 Jun  4 04:17 queuedata.json
[2025-06-05 00:44:50] -rwx------. 1 boinc boinc     37140 Jun  4 04:20 runpilot2-wrapper.sh
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc       100 Jun  4 15:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 00:44:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  4 15:43 run_atlas
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc       105 Jun  4 15:43 job.xml
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc      6392 Jun  4 15:43 init_data.xml
[2025-06-05 00:44:50] -rw-r--r--. 2 boinc boinc 216206243 Jun  4 15:43 EVNT.45006593._002029.pool.root.1
[2025-06-05 00:44:50] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:43 start_atlas.sh
[2025-06-05 00:44:50] drwxrwx--x. 2 boinc boinc        68 Jun  4 15:43 shared
[2025-06-05 00:44:50] -rw-r--r--. 2 boinc boinc    508879 Jun  4 15:43 input.tar.gz
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc         0 Jun  4 15:43 boinc_lockfile
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc      2525 Jun  4 15:55 pandaJob.out
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc    986819 Jun  4 15:58 agis_schedconf.cvmfs.json
[2025-06-05 00:44:50] drwx------. 4 boinc boinc      4096 Jun  4 15:58 pilot3
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc 181824986 Jun  4 19:57 HITS.45006595._050608.pool.root.1
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc       531 Jun  4 19:57 boinc_task_state.xml
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc      1017 Jun  4 19:58 memory_monitor_summary.json
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc   1598969 Jun  4 19:58 agis_ddmendpoints.agis.ALL.json
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc    385499 Jun  4 19:58 log.45006595._050608.job.log.tgz.1
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc        95 Jun  4 20:00 pilot_heartbeat.json
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc      7690 Jun  4 20:00 heartbeat.json
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc      4417 Jun  4 20:00 pilotlog.txt
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc   1240489 Jun  4 20:00 log.45006595._050608.job.log.1
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc       357 Jun  4 20:00 output.list
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc       620 Jun  4 20:00 runtime_log
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc   1648640 Jun  4 20:00 result.tar.gz
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc      8673 Jun  4 20:00 runtime_log.err
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc       657 Jun  4 20:00 bD8MDmdusg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmptmKDmatodjn.diag
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc      8192 Jun  5 00:44 boinc_mmap_file
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc        28 Jun  5 00:44 wrapper_checkpoint.txt
[2025-06-05 00:44:50] -rw-r--r--. 1 boinc boinc     20524 Jun  5 00:44 stderr.txt
[2025-06-05 00:44:50] HITS file was successfully produced:
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc 181824986 Jun  4 19:57 shared/HITS.pool.root.1
[2025-06-05 00:44:50]  *** Contents of shared directory: ***
[2025-06-05 00:44:50] total 390832
[2025-06-05 00:44:50] -rw-r--r--. 2 boinc boinc 216206243 Jun  4 15:43 ATLAS.root_0
[2025-06-05 00:44:50] -rw-r--r--. 2 boinc boinc     15093 Jun  4 15:43 start_atlas.sh
[2025-06-05 00:44:50] -rw-r--r--. 2 boinc boinc    508879 Jun  4 15:43 input.tar.gz
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc 181824986 Jun  4 19:57 HITS.pool.root.1
[2025-06-05 00:44:50] -rw-------. 1 boinc boinc   1648640 Jun  4 20:00 result.tar.gz
00:44:52 (14964): run_atlas exited; CPU time 51118.959741
00:44:52 (14964): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN